ID:

nve-mir-2041b-3

 Coordinate:

scaffold_74:859956-860023 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature
  1. scaffold_2674:7616-7637 -
  2. scaffold_230:58540-58561 +
  3. scaffold_74:859992-860013 -
star
  1. scaffold_2889:10676-10697 +
  2. scaffold_1856:10113-10134 +
  3. scaffold_1384:11667-11688 +
  4. scaffold_903:38034-38055 +
  5. scaffold_708:44414-44435 -
  6. scaffold_529:49895-49916 +
  7. scaffold_522:85315-85336 +
  8. scaffold_445:146044-146065 +
  9. scaffold_230:59339-59360 +
  10. scaffold_156:72123-72144 +
  11. scaffold_148:80173-80194 +
  12. scaffold_137:547825-547846 +
  13. scaffold_115:47683-47704 +
  14. scaffold_108:300287-300308 -
  15. scaffold_94:742367-742388 +
  16. scaffold_55:86136-86157 +
  17. scaffold_22:48783-48804 +
  18. scaffold_6:2098122-2098143 +
  19. scaffold_2:1728354-1728375 +
  20. scaffold_2:2197677-2197698 +
  21. scaffold_104:170287-170308 -
  22. scaffold_36:934818-934839 -
  23. scaffold_708:42682-42703 -
  24. scaffold_550:67063-67084 -
  25. scaffold_292:184251-184272 -
  26. scaffold_227:280903-280924 -
  27. scaffold_169:142502-142523 -
  28. scaffold_161:95227-95248 -
  29. scaffold_154:73661-73682 -
  30. scaffold_94:741307-741328 -
  31. scaffold_74:859963-859984 -
  32. scaffold_34:473971-473992 -
  33. scaffold_17:1404538-1404559 -
  34. scaffold_15:555328-555349 -
  35. scaffold_8:745167-745188 -
  36. scaffold_8:1901220-1901241 -
  37. scaffold_2:1727122-1727143 -
  38. scaffold_1:871389-871410 -
  39. scaffold_88:93562-93583 -
  40. scaffold_8663:3360-3381 -
  41. scaffold_448:105827-105848 -

Sense Strand Reads

TTTGTTTTTACTTCTAAAGAGCAAACCAGCTAAGACTAGTTAAGTGCATCCTCGGAAACCCAGGGGTATTTTTCTCTAACGTTTCACACGTTAGAGGAAAATACCCCTGGGTTTCCGAGGATGAGTTAAGTGTAATGTCCTTCACAAATTAATGTGAAGTAATGAAAC
*********************************************.((((((((((((((((((((((((((((((((((((.....))))))))))))))))))))))))))))))))))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR039756
"Gastrula, untreated"		 SRR039760
"Late planula, untreated"		 SRR039758
"Early planula, untreated"		 SRR039762
"Metamorphosing individuals, untreated"		 SRR039764
"Primary polyps, untreated"		 SRR039759
"Early planula, oxidized"		 SRR039731
"Adult females, untreated"		 SRR039763
"Metamorphosing individuals, oxidized"		 SRR039761
"Late planula, oxidized"		 SRR039754
"Adult males, untreated"		 SRR039755
"Adult males, oxidized"		 SRR039765
"Primary polyps, oxidized"		 SRR039757
"Gastrula, oxidized"		 SRR039729
"Blastula, oxidized"		 SRR039726
"Blastula, untreated"
............................................................CAGGGGTATTTTTCTCTAACGT...................................................................................... 22 0 3 18.00 54 14 5 7 1 7 2 2 3 3 3 3 2 1 1 0
............................................................CAGGGGTATTTTTCTCTAACGTT..................................................................................... 23 0 3 7.67 23 9 5 3 2 0 0 0 1 0 1 0 1 0 0 1
.........................................................................................GTTAGAGGAAAATACCCCTGGG......................................................... 22 0 20 4.30 86 0 30 0 0 0 34 0 22 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGTTT.................................................................................... 24 0 3 4.00 12 7 2 1 0 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGGT........................................................ 22 0 20 2.65 53 0 27 0 0 0 0 2 0 11 0 3 0 10 0 0
............................................................CAGGGGTATTTTTCTCTAACG....................................................................................... 21 0 3 2.33 7 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGGTATTTTTCTCTAACGTTT.................................................................................... 21 0 5 2.20 11 4 4 0 1 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGG......................................................... 21 0 20 1.95 39 0 0 32 6 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGGA........................................................ 22 1 20 1.35 27 21 0 0 5 0 0 0 0 0 0 0 0 1 0 0
............................................................CAGGGGGATTTTTCTCTAACGT...................................................................................... 22 1 3 1.00 3 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0
..................................................................TATTTTTCTCTAACGTTTCACA................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGTCT.................................................................................... 24 1 3 1.00 3 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................TATTTTTCTCTAACGTTTCACACGTTA........................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGG.......................................................... 20 0 20 0.80 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGC...................................................................................... 22 1 5 0.80 4 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGTTC.................................................................................... 24 1 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAT......................................................................................... 19 1 3 0.67 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTTTAACGT...................................................................................... 22 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGGTT....................................................... 23 0 20 0.65 13 10 0 0 0 0 3 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGA......................................................... 21 1 20 0.60 12 0 2 2 6 0 0 2 0 0 0 0 0 0 0 0
.............................................................AGGGGTATTTTTCTCTAACGT...................................................................................... 21 0 5 0.60 3 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................CACACGTTAGAGGAAAATACCCCA............................................................ 24 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGTGTATTTTTCTCTAACGT...................................................................................... 22 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................CCGGGGTCTTTTTCTCTAGCGT...................................................................................... 22 3 6 0.33 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGTTA.................................................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................CAGGGGAATTTTTCTCTAACGTTT.................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTCTTTTTCTCTAACGTTT.................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAAC........................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGATT.................................................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGTAT.................................................................................... 24 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGTC..................................................................................... 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAA......................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGGATTTTTCTCTAACGTTT.................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CCAGGGGTATTTTTCTCTAA......................................................................................... 20 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGAATTTTTCTCTAACGT...................................................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTGG.......................................................... 21 0 20 0.25 5 0 0 2 0 0 0 0 0 2 1 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCCAACGTT..................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTGTCTCTAACGT...................................................................................... 22 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTATAACGTT..................................................................................... 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGCATTTTTCTCTAACGT...................................................................................... 22 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................CAGGGGTATTTTTCTCTAATGT...................................................................................... 22 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGCATTTTTCTCTAACGTTT.................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTGGGA........................................................ 23 1 20 0.20 4 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................AGGGGTATTTTTCTCTAACGTT..................................................................................... 22 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGGAGGAAAATACCCCTGGGT........................................................ 22 1 20 0.20 4 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0
............................................................GAGGGGTATTTTTCTGTAACGTTT.................................................................................... 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTGTTTTTCTCTAACGTTT.................................................................................... 24 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGCT..................................................................................... 23 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTATCTAACGT...................................................................................... 22 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CCGGGGTATTTATCTCTAACGT...................................................................................... 22 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GGTATTTTTCTCTAACGTTA.................................................................................... 20 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTATT........................................................................................ 20 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGGTATTTTTCTCTAACGTT..................................................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACTT...................................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGGTATTTTTCTCTAACGTAT.................................................................................... 21 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTATCTAACGTTT.................................................................................... 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGGATTTTTCTCTAACGC...................................................................................... 22 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................GAGGGGTATTTTTCTCTAACGATT.................................................................................... 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGAATTTTTCTCTAAAGTTT.................................................................................... 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACTTT..................................................................................... 23 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGAATTTTTCTCTAACGC...................................................................................... 22 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................GGTATTTTTCTCTAACGTTT.................................................................................... 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGGATTTTTCGCTAACGT...................................................................................... 22 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AGGGGGATTTTTCTCTAAAGTT..................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTGTTTTTCTCTAACGT...................................................................................... 22 1 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................AGGGGTATTTTTCTCTAACGTA..................................................................................... 22 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................CAGTTGTATTTTTCTCTAACGTTT.................................................................................... 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTGTTTTTCTCTAACGTT..................................................................................... 23 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................AGGGATATTTTTCTCTAACGT...................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATTTTTCTCTAACGTTTCT.................................................................................. 19 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................CAGTGGTATTTTTCTCTAACGTT..................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACTCTT.................................................................................... 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTGGAGGAAAATACCCCTGG.......................................................... 21 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTT........................................................... 20 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGGC........................................................ 22 1 20 0.15 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................GTTGGAGGAAAATACCCCTGGG......................................................... 22 1 20 0.15 3 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0
...............................................................GGGTATTTTTCTCTAACGCTT.................................................................................... 21 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACGTTTT................................................................................... 25 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGGGATTCTTCTCTAACGTAT.................................................................................... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................CAGGGGTATTTTTCTCTAACATA..................................................................................... 23 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CTGAGGGATTTTTCTCTAACGTTT.................................................................................... 24 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTGGC......................................................... 22 1 20 0.10 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTGGGTT....................................................... 24 0 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTCG.......................................................... 20 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................TAGAGGAAAATACCCCTGCG......................................................... 20 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAGATACCCCTGGG......................................................... 22 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTGGA......................................................... 22 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATCCCCCTGG.......................................................... 20 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GATAGAGGAAAATACCCCTGGC......................................................... 22 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTGCC......................................................... 22 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................TAGAGGAAAATACCCCTGGGAA....................................................... 22 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAGAATACCCCTGGGTT....................................................... 23 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGGTTA...................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGAGGAAAATACCCCTGGGT........................................................ 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGTCAAATACCCCTGG.......................................................... 20 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTTG.......................................................... 20 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTACAGGAAAATACCCCTGGG......................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTT........................................................... 19 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAACTACCCCTGGG......................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGGTA....................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGACAATACCCCTGGG......................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGCGGAAAATACCCCTGGGT........................................................ 22 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................GTTAGAGGACAATACCCCTGGG......................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAATTACCCCTT........................................................... 20 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGAGGAAAATACCCCTGGAT........................................................ 20 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................GGTAGAGGAAAATACCCCTGGG......................................................... 22 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGGAAT...................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGGGGAAAATACCCCTGGGTG....................................................... 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACTCCTGGGAA....................................................... 23 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTGGC......................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCCGG.......................................................... 20 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGTAGAGGAAAAGACCCCTGGG......................................................... 22 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACTCCTT........................................................... 20 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAGATACCCCTGGG......................................................... 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGAGTTAAGTCTAATCT.............................. 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGACAATCCCCCTGGGA........................................................ 23 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACACCTGGGC........................................................ 22 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................TAGAGGAAAATACCCCTGG.......................................................... 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TAGAGGAAAATACCCCTGGGAT....................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................GTTAGAGGAAATTACCCCTGGG......................................................... 22 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAAATACCCCTG........................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGAAGATACCCCTGGGT........................................................ 22 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGAGGCAAATACCCCTGGGT........................................................ 22 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTGGGT........................................................ 23 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTAGAGGAAAATACCCCTG........................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGGAGGAAAATACCCCTGGGA........................................................ 22 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................TTAGCGGAACATACCCCTGGGT........................................................ 22 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAACAAAAATGAAGATTTCTCGTTTGGTCGATTCTGATCAATTCACGTAGGAGCCTTTGGGTCCCCATAAAAAGAGATTGCAAAGTGTGCAATCTCCTTTTATGGGGACCCAAAGGCTCCTACTCAATTCACATTACAGGAAGTGTTTAATTACACTTCATTACTTTG
******************************************.((((((((((((((((((((((((((((((((((((.....))))))))))))))))))))))))))))))))))))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR039731
"Adult females, untreated"		 SRR039762
"Metamorphosing individuals, untreated"		 SRR039760
"Late planula, untreated"		 SRR039758
"Early planula, untreated"		 SRR039754
"Adult males, untreated"		 SRR039759
"Early planula, oxidized"		 SRR039765
"Primary polyps, oxidized"
..................................................................................AAGTGTGCAATCTCCTTTTAT................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0
..........................................................GGGTCCCCATAAAAAGAGATTG........................................................................................ 22 0 3 0.67 2 0 0 1 1 0 0 0
...........................................................GGTCCCCATAAAAAGAAATTG........................................................................................ 21 1 3 0.33 1 0 1 0 0 0 0 0
.........................................................AGGGTCCCCATAAAAAGAGATT......................................................................................... 22 1 3 0.33 1 0 1 0 0 0 0 0
..........................................................GGGTCCCCATAAAAAGAGGTTG........................................................................................ 22 1 4 0.25 1 0 1 0 0 0 0 0
...........................................................GGTCCCCATAAAAAGAGAGT......................................................................................... 20 1 9 0.11 1 0 0 1 0 0 0 0
..........................................................GGGTCCCCATTAAATGAGATTG........................................................................................ 22 2 20 0.05 1 0 0 0 0 0 1 0
.................................................................AAGAAAAAGAGATCGCAAAGT.................................................................................. 21 3 20 0.05 1 0 0 0 0 1 0 0
.......................................................................................TGCAATCTCATTTTATGGGGAC........................................................... 22 1 20 0.05 1 0 0 0 0 0 0 1

Generated: 08/21/2014 at 10:50 AM