ID:

nve-mir-2037

Coordinate:

scaffold_433:29619-29710 +

Confidence:

Known

Type:

Unknown

[View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.1 -37.1 -37.1 -35.3

Sense Strand Reads

GAAATGGAATCGGTTCTTATGGCGCCCGTGGTAAATGATTCATGAGATGGAGCTAGGTCTTGGTCACCGTGGTAAAAGCCGTCCAAGCACCCTCTTGGCAGTGTGATTGGAGACTTTTACCGTGGTCTGAGATCAGTCATACCCGGCGAACTGCGTAGCACGCACCACGTGATCATCAAAAGATTCCAAGAA
***********************************...(((((...)))))(((.((((((((..(((((((((((((...(((((((((((....))..))))..)))))..))))))))))))))))))))))))..(((.(((....))).)))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR039754
"Adult males, untreated"
SRR039731
"Adult females, untreated"
SRR039732
"Adult females, oxidized"
SRR039755
"Adult males, oxidized"
SRR039764
"Primary polyps, untreated"
SRR039765
"Primary polyps, oxidized"
SRR039762
"Metamorphosing individuals, untreated"
SRR039763
"Metamorphosing individuals, oxidized"
SRR039758
"Early planula, untreated"
SRR039761
"Late planula, oxidized"
SRR039759
"Early planula, oxidized"
SRR039726
"Blastula, untreated"
SRR039760
"Late planula, untreated"
SRR039728
"Unfertilized eggs, oxidized"
SRR039729
"Blastula, oxidized"
SRR039756
"Gastrula, untreated"
SRR039757
"Gastrula, oxidized"
SRR039727
"Unfertilized eggs, untreated"
.....................................................................................................TGTGATTGGAGACTTTTACCGT..................................................................... 22 0 1 1331.00 1331 367 252 209 181 101 73 35 34 28 18 12 6 5 3 4 0 3 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTTT................................................................... 24 2 1 97.00 97 14 15 12 12 13 12 9 4 0 5 0 0 0 0 0 1 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTT.................................................................... 23 1 1 44.00 44 9 9 6 1 6 5 4 1 1 1 1 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCG...................................................................... 21 0 1 34.00 34 10 15 1 1 4 1 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCTT..................................................................... 22 1 1 18.00 18 10 0 0 4 1 1 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACC....................................................................... 20 0 1 13.00 13 5 7 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTAC........................................................................ 19 0 1 13.00 13 4 7 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................GTGATTGGAGACTTTTACCGT..................................................................... 21 0 1 11.00 11 0 5 1 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGACTTTTACCGT..................................................................... 22 1 1 9.00 9 3 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACT....................................................................... 20 1 1 9.00 9 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTATCGT..................................................................... 22 1 1 8.00 8 0 2 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGC..................................................................... 22 1 1 8.00 8 3 2 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACAGT..................................................................... 22 1 1 8.00 8 2 1 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGCGATTGGAGACTTTTACCGT..................................................................... 22 1 1 8.00 8 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGGGACTTTTACCGT..................................................................... 22 1 1 8.00 8 1 1 4 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................TGTGATTGGAGATTTTTACCGT..................................................................... 22 1 1 7.00 7 0 1 1 1 3 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACTGT..................................................................... 22 1 1 7.00 7 0 2 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTA......................................................................... 18 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTTATTGGAGACTTTTACCGT..................................................................... 22 1 1 5.00 5 2 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGTAGACTTTTACCGT..................................................................... 22 1 1 5.00 5 0 0 2 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGATACTTTTACCGT..................................................................... 22 1 1 4.00 4 0 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTTA................................................................... 24 2 1 4.00 4 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TCTGATTGGAGACTTTTACCGT..................................................................... 22 1 1 4.00 4 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTAGAGACTTTTACCGT..................................................................... 22 1 1 3.00 3 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTAT........................................................................ 19 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGCCTTTTACCGT..................................................................... 22 1 1 3.00 3 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGAGTGGAGACTTTTACCGT..................................................................... 22 1 1 3.00 3 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TTTGATTGGAGACTTTTACCGT..................................................................... 22 1 1 3.00 3 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGATTGGAGACTTTTACCGTTT................................................................... 23 2 1 3.00 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTCTTACCGT..................................................................... 22 1 1 3.00 3 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCTTT.................................................................... 23 2 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGGCTTTTACCGT..................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGA..................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGTTTGGAGACTTTTACCGT..................................................................... 22 1 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTA.................................................................... 23 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGACACTTTTACCGT..................................................................... 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGAATTTTACCGT..................................................................... 22 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGCTTGGAGACTTTTACCGT..................................................................... 22 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTGCCGT..................................................................... 22 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGATTGGAGACTTTTACCTT..................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGGTTGGAGACTTTTACCGT..................................................................... 22 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTATCGTT.................................................................... 23 2 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTGTACCGT..................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTAT................................................................... 24 2 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTAACGT..................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TATGATTGGAGACTTTTACCGT..................................................................... 22 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATGGGAGACTTTTACCGT..................................................................... 22 1 1 2.00 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................GTGATTGGAGACTTTTACC....................................................................... 19 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACCTTTACCGT..................................................................... 22 1 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACGTTTACCGT..................................................................... 22 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGATTGGAGACTTTTACCGTT.................................................................... 22 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTATTGT..................................................................... 22 2 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCTTTT................................................................... 24 3 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................TGTGATTGGAGAATTTTACAGT..................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGACATTTTTACCGT..................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGTTTGGAGACTTTTATCGTT.................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGTCTTTTACCGTTT................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGACGTTTACCGT..................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CTGTGATTGGAGACTTTTACCGT..................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGACTTTTACCGG..................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACAGTTT................................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CGTGATTGGAGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CGGGATTGGAGACTTTTACCGTTG................................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACTGTATT.................................................................. 25 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TATGATTTGAGACTTTTACCGT..................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCCTT.................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACGGT..................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATGGGAGACTTTTACCGTT.................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGG..................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ATTGGAGACTTTTACCGT..................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTAGCGT..................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTTCCGTTT................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTTGAGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGAGATTGGAGACTTTTACCGT..................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGAGTTTTACCGA..................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTTAT.................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGCAGACTTTTACAGTT.................................................................... 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTAGCGA..................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TCTGATTGGAGACTTTTACCG...................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGATTGGAGACTTTTACCGT..................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGACTTTTACCG...................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TCTGATTGGAGACTTTTACCGTTT................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGTCTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGAGGGGAGACTTTTACCGT..................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGCGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTCA................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGATTGGAGACTTTTACCGC..................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGAT.................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTTTTT................................................................. 26 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTGGCGT..................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTG.................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTAA........................................................................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATGGGAGACTTTTACCTT..................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACTT...................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGTCTTTTATCGT..................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGACTTTTACCGTTT................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGTGACTTTTAACGT..................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCGTTTT.................................................................. 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TTTGATTGGAGACTTTTACCTT..................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATGGGAGAGTTTTACCGT..................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGAATTTTACCGTT.................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGATTGGAGACGTTTACCGT..................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGACTTTTAC........................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................GTGATTGGAGACTTTTACT....................................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACTAT..................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TTTGATTTGAGACTTTTACCGT..................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTCTACCGT..................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTTCCTT..................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTAACGTT.................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGAATTTTACAGT..................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGTAGACTTTTA......................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTGTTTCCGT..................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................GTGATTGGAGACTGTTACCGT..................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGTAGACTTTTACCGTTT................................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGGTTGGAGAGTTTTACCGT..................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGATTGTAGACTTTTACCGT..................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGAATGGAGACTTTTACCGT..................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGTATACTTTTACCGT..................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TCGGGATTGGAGACTTTTACCGT..................................................................... 23 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTTGAGACTTTTACCGTTT................................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATCGGAGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGCAGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGAGTTTTACCGT..................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGCGACTTTTACGTT..................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGTGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTGTACCGTTT................................................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGAGTGGAGACTTTTACCGA..................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGCTTGCAGACTTTTACCGT..................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTCTTACCGTTT................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTAATTGGAGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGAAGACCTTTACCGTT.................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGAGTGGAGACTTTTACCGTT.................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGGCTTTTACCGT..................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTCGAGACTTTTACCGT..................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACCT...................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGAGTGGAGAATTTTACCGT..................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGACACTTTTACCGTTT................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGAGTGGAGACTTTTAACGT..................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GGTAAAAGCCGTCCAAGCT....................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTACTGC..................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTATTACCGT..................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGATACTTTTACT....................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGCGACTTTTACCGTTT................................................................... 24 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGGCTTTCACCGT..................................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTAGAGACTTTTACA....................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTATA....................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGGTTGGAGTCTTTTACAGT..................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................GTGATATGAGACTTTTACCGA..................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGTTTGGAGCATTTTACCGT..................................................................... 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GTAGCACGGAACACGTGA.................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGACTTTTGCAGT..................................................................... 22 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGACTTTTTA........................................................................ 19 2 7 0.29 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGATTTTTACCGTTT................................................................... 24 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTTATTGGAGACTTTTACCTTT.................................................................... 23 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGCCTTTTACT....................................................................... 20 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TTTGATTGGACACTTTTACCTT..................................................................... 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGAATTTTTCCG...................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGTTTGGAGTTTTTTACCGT..................................................................... 22 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGGGATTGGAGATTTTTACGG...................................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGGATTGGAGCCTTTTACCGG..................................................................... 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTTGATACTTTTACCTT..................................................................... 22 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGGCTTTTAT........................................................................ 19 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGAGATGGGAGACTTTTACCGG..................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CGCGGTCTGAGAACAGTCACA................................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................TTTGATTGTAGACTTTTAC........................................................................ 19 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGATTGGAGCCTTTTGCT....................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTTTACCTTAGCCAAGAATACCGCGGGCACCATTTACTAAGTACTCTACCTCGATCCAGAACCAGTGGCACCATTTTCGGCAGGTTCGTGGGAGAACCGTCACACTAACCTCTGAAAATGGCACCAGACTCTAGTCAGTATGGGCCGCTTGACGCATCGTGCGTGGTGCACTAGTAGTTTTCTAAGGTTCTT
***********************************...(((((...)))))(((.((((((((..(((((((((((((...(((((((((((....))..))))..)))))..))))))))))))))))))))))))..(((.(((....))).)))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR039731
"Adult females, untreated"
..............................................................................................................................................GGCCGGTTGAAGCAACGTGCG............................. 21 3 2 0.50 1 1

Generated: 08/21/2014 at 10:14 AM