ID:

mmu-mir-874

 Coordinate:

chr13:58023125-58023200 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-39.0 -38.3 -38.3

Sense Strand Reads

CCAGTCTTCTACTCTACTGGACACACTTCCTTCGGATGAATTTTTTGGTGTTAGCCCTGCGGCCCCACGCACCAGGGTAAGAGAGACTCACTTCCTGCCCTGGCCCGAGGGACCGACTGGCTGGGCCTGCTTTCTGCCCAGCTCACCTGTCATGGAAGAGAGTTTGGACACACTCC
********************************************..(((..(((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))).))).....******************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM510444
brain		 SRR039610
brain		 SRR038744
brain		 SRR206940
brain		 SRR037906
brain		 SRR038741
brain		 SRR553582
brain		 SRR037905
brain		 SRR040488
liver		 SRR206939
brain		 SRR553585
kidney		 SRR553584
heart		 SRR553583
cerebellum		 SRR059768
spleen		 SRR206941
brain		 SRR059765
thymus		 SRR206942
brain		 SRR391848
embryo		 SRR077866
liver		 SRR059767
thymus		 SRR059770
spleen		 SRR037907
brain		 SRR391853
embryo		 SRR077864
liver		 SRR391851
embryo		 SRR391852
embryo		 SRR042471
spleen		 SRR037904
brain		 SRR077865
liver		 SRR042473
lymph		 SRR059766
thymus		 SRR345198
brain		 SRR345201
brain		 SRR345196
brain		 SRR345197
brain		 SRR095853
heart		 SRR391846
embryo		 SRR391850
embryo		 SRR391849
embryo		 SRR1509750
spermatogonia		 SRR391845
embryo		 SRR059771
spleen		 SRR042477
brain		 SRR345202
brain		 SRR065059
pancreas		 SRR037920
embryo		 SRR1509747
oocyte		 SRR039153
muscle		 SRR345204
brain		 SRR042480
kidney		 SRR345203
brain		 SRR345199
brain		 SRR037921
embryo		 SRR059769
spleen		 SRR391847
embryo		 SRR039186
fibroblast		 SRR1509749
zygote		 SRR065058
pancreas		 SRR042456
bone marrow		 SRR039152
muscle		 SRR039185
fibroblast		 SRR039183
fibroblast		 SRR037929
embryo		 SRR039154
muscle		 SRR042465
spleen		 SRR345205
brain		 SRR116846
epididymis		 SRR248525
Thy1-_somatic_testes_cells		 SRR042470
lymph		 SRR248526
Thy1-_somatic_testes_cells		 SRR037898
ovary		 SRR039184
fibroblast		 SRR042481
pancreas		 SRR345207
brain		 SRR037897
ovary		 SRR042472
lymph		 SRR345200
brain		 SRR037928
embryo		 SRR069809
Type_A_spermatogonia		 SRR037922
embryo		 SRR095855BC7
heart		 SRR037925
embryo		 SRR037927
embryo		 SRR525237
Blood		 SRR037924
embryo		 SRR042466
spleen		 SRR042461
bone marrow		 GSM475281
testes		 SRR032476
uterus		 SRR037902
testes		 SRR037923
embryo		 SRR042486
ovary		 SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		 SRR248524
Thy1+_spermatogonia		 SRR042479
liver		 SRR1509751
foetal_primordial_germ_cells		 SRR553602
sertoli_cells		 SRR032477
uterus		 SRR037901
testes		 SRR037919
embryo		 SRR037930
embryo		 SRR042468
lymph		 SRR060845
brain		 SRR095855BC5
heart		 SRR248523
Thy1+_spermatogonia		 SRR345206
brain		 SRR042459
blood		 SRR042462
bone marrow		 SRR042464
thymus		 SRR042469
lymph		 SRR073954
blood		 SRR095855BC2
heart		 SRR1509748
spermatozoa		 SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		 SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		 SRR1647954
Dicer_cKO_pachytene_spermatocytes		 SRR525238
Blood		 SRR553586
testes		 SRR042484
salivary gland		 SRR014235
testes		 SRR037899
ovary		 SRR037926
embryo		 SRR042455
blood		 SRR042467
spleen		 SRR073955
blood		 SRR095855BC1
heart		 SRR095855BC6
heart		 SRR1647953
Dicer_WT_pachytene_spermatocytes		 SRR042483
muscle		 GSM509279
testes		 SRR014234
ovary		 SRR042482
skin		 SRR069810
pachytene_spermatocytes		 SRR095855BC10
heart		 SRR095855BC3
heart		 SRR095855BC8
heart		 SRR095855BC9
heart		 SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		 SRR248527
spermatogonia		 SRR390297
fibroblast		 SRR553603
spermatids
..............................................................................................CTGCCCTGGCCCGAGGGACCGAC........................................................... 23 0 1 3752.00 3752 388 271 252 331 141 250 263 132 89 234 174 126 116 40 103 40 75 42 29 18 20 24 57 36 48 43 28 30 13 8 13 0 4 0 1 1 19 6 10 0 25 0 7 12 4 17 0 7 9 6 6 2 12 9 11 10 0 3 1 4 3 5 5 5 3 2 4 8 5 11 6 3 3 3 1 4 0 6 1 3 5 5 4 1 1 1 2 1 1 0 1 2 2 3 0 0 4 0 0 1 1 1 2 0 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 1 1 1 0 0 1
..............................................................................................CTGCCCTGGCCCGAGGGACCGA............................................................ 22 0 1 2719.00 2719 455 117 110 79 154 93 94 136 123 37 40 81 88 100 48 74 47 25 42 59 38 42 18 38 21 18 18 24 12 17 26 34 34 6 16 0 10 13 7 0 9 0 23 12 22 7 0 10 18 9 7 20 7 12 1 6 0 16 13 5 7 1 4 4 4 9 4 3 3 4 4 6 8 10 5 2 3 4 5 3 0 0 3 0 1 1 2 3 2 1 1 0 3 1 0 0 0 3 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 1 1 2 2 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACT.......................................................... 24 0 1 988.00 988 131 97 99 37 37 88 24 31 52 15 37 12 10 4 13 4 18 7 15 4 9 12 15 11 16 13 22 6 12 13 5 0 0 0 0 1 1 3 2 0 4 0 6 1 5 4 0 11 1 8 3 0 3 1 5 1 0 1 1 1 3 0 1 1 2 0 3 1 1 2 2 0 3 0 2 4 0 2 3 2 0 0 2 0 0 1 1 1 0 2 0 2 0 0 3 0 0 0 0 0 1 0 0 2 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACA.......................................................... 24 1 1 564.00 564 94 32 43 36 33 33 25 32 11 25 5 10 6 4 12 1 12 8 9 2 1 9 22 8 11 18 3 7 4 0 0 0 0 0 0 0 8 2 0 0 3 0 4 0 0 1 0 1 0 1 6 0 3 0 0 2 0 0 0 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 1 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGTAAGA.............................................................................................. 23 0 1 408.00 408 52 5 5 22 14 9 18 20 10 13 11 5 14 13 5 7 2 19 10 13 7 3 6 5 9 4 1 4 8 0 6 0 0 0 0 0 7 10 6 0 1 0 0 0 0 3 0 0 0 1 2 0 5 6 8 7 0 0 0 0 5 4 3 0 0 0 1 0 1 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGAT........................................................... 23 1 1 339.00 339 32 7 17 7 12 13 5 7 29 3 4 0 7 41 3 20 1 4 4 12 31 1 0 5 0 3 8 2 1 9 8 0 0 0 0 0 2 0 0 0 1 0 0 2 2 0 0 2 3 5 0 0 0 1 1 2 0 1 4 1 0 0 0 0 3 1 0 1 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGTAAG............................................................................................... 22 0 1 327.00 327 69 6 12 18 30 5 16 23 8 19 1 2 8 11 10 6 6 6 4 5 7 3 2 0 0 1 1 11 1 2 1 0 1 0 1 0 0 2 4 0 1 0 0 1 0 0 0 0 0 0 0 0 2 1 1 1 0 1 0 0 1 1 3 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 3 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGCCCTGGCCCGAGGGACCGAC........................................................... 22 0 1 209.00 209 14 27 15 12 7 21 12 5 2 10 1 7 2 3 7 1 5 9 8 0 5 0 5 1 1 1 0 0 2 0 0 0 0 0 0 0 0 2 3 0 0 6 0 0 2 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGAA........................................................... 23 1 1 172.00 172 23 7 4 10 8 6 1 9 8 4 1 5 3 6 0 9 3 1 4 8 5 1 1 2 0 1 10 1 7 5 1 0 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 1 1 2 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCG............................................................. 21 0 1 153.00 153 7 17 11 5 6 7 7 2 3 11 7 2 2 0 4 3 5 1 0 2 1 1 1 0 1 2 3 1 0 1 2 1 7 6 6 0 0 0 0 0 1 0 1 4 2 0 0 0 0 0 1 2 0 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGCCCTGGCCCGAGGGACCGA............................................................ 21 0 1 138.00 138 14 12 6 0 7 5 6 10 6 0 1 3 1 2 0 1 0 1 2 3 0 1 2 1 2 1 0 1 1 0 1 0 0 1 0 0 1 2 3 0 0 31 0 0 1 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGAC............................................................... 19 0 1 131.00 131 4 3 3 2 3 6 0 0 2 0 1 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 4 0 9 8 22 16 0 1 0 3 0 0 0 0 4 5 1 0 0 0 1 4 3 0 0 0 0 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGT............................................................ 22 1 1 123.00 123 16 7 13 3 9 3 3 9 2 0 1 5 2 11 2 10 1 0 2 4 4 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGTAA................................................................................................ 21 0 1 93.00 93 31 1 5 0 9 0 0 12 0 1 0 0 0 1 1 1 2 0 2 0 1 4 0 2 0 0 1 2 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 1 0 4 0 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGCCCTGGCCCGAGGGACCGACT.......................................................... 23 0 1 86.00 86 10 7 12 0 1 11 3 4 0 2 1 1 2 2 2 0 1 0 2 0 0 1 2 5 1 1 1 3 2 0 0 0 0 0 0 0 0 1 2 0 0 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGTA................................................................................................. 20 0 1 81.00 81 9 0 3 4 4 0 4 3 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 6 1 14 3 0 0 0 0 0 0 0 0 5 0 0 0 3 0 2 2 2 0 0 0 0 0 0 0 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................GCCCCACGCACCAGGGTAAGA.............................................................................................. 21 0 1 80.00 80 1 1 1 1 5 0 0 2 5 0 0 0 0 1 0 0 0 24 1 0 0 0 4 0 3 5 0 0 0 0 0 0 0 0 0 0 0 11 8 0 1 0 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACC.............................................................. 20 0 1 69.00 69 4 3 2 3 3 5 2 2 5 0 0 8 2 0 9 0 1 0 0 0 0 1 1 0 0 1 5 0 0 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGCCCTGGCCCGAGGGACCGACA.......................................................... 23 1 1 58.00 58 5 6 4 2 4 4 1 3 2 3 0 3 1 0 1 1 1 4 1 0 0 1 4 1 2 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGATT.......................................................... 24 1 1 55.00 55 0 5 1 2 0 4 1 1 2 1 1 1 2 6 1 2 2 0 0 2 6 0 0 3 0 0 2 0 2 2 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGAAA.......................................................... 24 2 1 51.00 51 3 1 1 4 4 1 0 1 6 1 0 0 3 1 0 3 2 1 1 1 3 0 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGA................................................................ 18 0 1 49.00 49 2 0 1 0 0 1 0 0 2 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 2 0 1 5 3 11 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGAAT.......................................................... 24 1 1 46.00 46 5 1 1 0 7 0 0 1 3 1 1 2 2 4 0 1 0 2 0 1 3 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGAG........................................................... 23 1 1 42.00 42 4 1 1 6 1 4 3 0 0 0 1 1 4 4 0 2 2 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACATC........................................................ 26 3 1 42.00 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACC.......................................................... 24 1 1 41.00 41 4 6 5 2 1 2 3 2 1 1 5 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGTAAGT.............................................................................................. 23 1 1 36.00 36 9 0 2 0 3 1 0 3 3 0 0 0 0 0 0 1 1 2 0 0 2 0 0 1 0 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACG.......................................................... 24 1 1 36.00 36 3 1 2 4 0 0 3 2 2 4 1 1 1 0 3 0 2 0 0 0 0 0 0 1 2 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TCCTGCCCTGGCCCGAGGGACCGA............................................................ 24 0 1 35.00 35 16 0 0 0 6 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCACGAGGGACCGA............................................................ 22 1 1 32.00 32 1 0 0 0 11 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGAATC......................................................... 25 2 1 32.00 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACAT......................................................... 25 2 1 28.00 28 9 2 1 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGTT........................................................... 23 2 1 27.00 27 1 3 0 1 1 1 0 2 1 0 0 0 2 6 0 3 0 0 1 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGC............................................................ 22 1 1 25.00 25 4 1 1 0 5 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CCTGCCCTGGCCCGAGGGACCGA............................................................ 23 0 1 25.00 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCACGAGGGACCGAC........................................................... 23 1 1 23.00 23 1 1 1 0 6 1 0 8 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGCC........................................................... 23 1 1 22.00 22 3 0 1 1 7 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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...............................................................................................TGCCCTGGCTCGAGGGACCGACT.......................................................... 23 1 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACGAT........................................................ 26 3 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGTCCGA............................................................ 22 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGGCCGAT........................................................... 23 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGATC.......................................................... 24 2 1 2.00 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGTTCTGGCCCGAGGGACCGA............................................................ 22 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGGA................................................................................................. 20 1 2 2.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGCCCGCC........................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGCAAG............................................................................................... 22 1 1 2.00 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCTGAGGGACCGACA.......................................................... 24 2 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCAAGGGACCGA............................................................ 22 1 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCCGGCCCGAGGGACCGACA.......................................................... 24 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGTTA.......................................................... 24 3 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................CCGGCCCCACGCACCAGGGTAAGA.............................................................................................. 24 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGTTAAG............................................................................................... 22 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGCCCTGGCCCGAGGGAACGAC........................................................... 22 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TCCCCTGGCCCGAGGGACCGA............................................................ 21 1 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGAACCGACT.......................................................... 24 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCAAGGGACCGAC........................................................... 23 1 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCAGAGGGACCGAC........................................................... 23 1 1 2.00 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGAACGACA.......................................................... 24 2 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACCT......................................................... 25 2 1 2.00 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGTAAC............................................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGACCTGGCCCGAGGGACCGA............................................................ 22 1 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCATC........................................................... 23 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCAGAGGGACCGA............................................................ 22 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGTCCCGAGGGACCGACT.......................................................... 24 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCTCTGGCCCGAGGGACCGACA.......................................................... 24 2 1 2.00 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGGCCCCACGCACCAGGGTA................................................................................................. 20 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGGCCCCACGCACCAGGGCAAGA.............................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGGC............................................................... 19 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGACTTA........................................................ 26 2 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCAACA.......................................................... 24 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTGCCCTGGCCCGAGGGACCGAGC.......................................................... 24 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGTCAGAAGATGAGATGACCTGTGTGAAGGAAGCCTACTTAAAAAACCACAATCGGGACGCCGGGGTGCGTGGTCCCATTCTCTCTGAGTGAAGGACGGGACCGGGCTCCCTGGCTGACCGACCCGGACGAAAGACGGGTCGAGTGGACAGTACCTTCTCTCAAACCTGTGTGAGG
********************************************..(((..(((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))).))).....******************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM361394
brain		 GSM361399
brain		 GSM361398
brain		 GSM361430
brain		 GSM361408
brain		 GSM361407
brain		 GSM361415
brain		 SRR116846
epididymis		 SRR073954
blood		 SRR345205
brain		 SRR345207
brain		 SRR345198
brain		 SRR345200
brain		 SRR039154
muscle		 SRR059766
thymus		 SRR095855BC2
heart		 SRR345203
brain		 SRR553582
brain		 SRR391850
embryo		 SRR059769
spleen		 SRR037924
embryo		 SRR037928
embryo		 SRR345201
brain		 SRR553585
kidney		 SRR039610
brain		 SRR345196
brain		 SRR345197
brain		 SRR345199
brain		 SRR345202
brain		 SRR391846
embryo
...........................................................GCCGGGGTGCGTGGTCCCATTCT.............................................................................................. 23 0 1 9.00 9 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GACGGGACCGGGCTCCCTGGCTG........................................................... 23 0 1 8.00 8 2 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GCCGGGACCGGGCTCCCTGGCTC........................................................... 23 2 1 4.00 4 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GACGGGACCGGGCTCCCTGGCTA........................................................... 23 1 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCCGGGGTGCGTGGTCCCATTC............................................................................................... 22 0 1 3.00 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCGGGGGTGCGTGGTCCCATTCT.............................................................................................. 23 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GACGGGCCCGGGCTCCCTGGCTG........................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GCCGGGACCGGGCTCCCTGGCTG........................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GCCGGGCCCGGGCTCCCTGGCTG........................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCCGGGTTGCGTGGTCCCATTC............................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GACGGGACCGGGCTCCCTGGC............................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GGTGCGTGGTCCCATTCT.............................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CGGGGTGCGTGGTCCCATTC............................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CCGGGGTGCGTGGTCCCATTC............................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCCGGGGTGCGTGGTCCCATTCTT............................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................AAACCACAGCCGGGACGCCG................................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGAGGGGACGGGGCTCCTTGGCTG........................................................... 24 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................AAACCACAGTCGGGGCGC................................................................................................................... 18 2 8 0.25 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACCACAATCGGGATCCCGGCGT............................................................................................................. 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CCACAATCGGGACCGCGGCGT............................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACCACAGTCCGGACGCTGGGGT............................................................................................................. 22 3 11 0.18 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................AAGGCGGGTCGAGTGGCCA.......................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACGGGACCGGTCTCCCGGGC............................................................. 22 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GGGTAGGGCTCCCTGGCTGAC......................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGACAATCGGGATGCCGGCGT............................................................................................................. 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CACTGGCTGCCCGACCCGG................................................. 19 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TCCCTGGCTGAC......................................................... 12 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CTGGCTGACCG....................................................... 11 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CGGGACCGGGCT.................................................................... 12 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GCCCTATGTGAAGGAAGC.............................................................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CGAAAGACGGATCGAGCGGA............................ 20 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................GGCGGCGCTCCCTGGCTGAC......................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAGACGGGTCGAGTG.............................. 15 0 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................GGACCGGGCTCCATGGCA............................................................ 18 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................AAACCAAAATCGGGGCGC................................................................................................................... 18 2 16 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CGGGCTTCCTGGCTG........................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GGCCCGGGCTCCCTGGCA............................................................ 18 2 18 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................CACAATCGGGAGGGCGGCGT............................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................GGGGGGGCTCCCTGGCTGAC......................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................GGGAGGGGCTCCCTGGCTGAC......................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AGATGAGATGAC............................................................................................................................................................. 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CTGGCTCCCTGGCTG........................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CAATCGGGATGCGGGGGT............................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................CACAATCGGGACGGCG................................................................................................................. 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................GGGCCCGGGCTCCATGGCA............................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CCCTGGCTGAC......................................................... 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCTGTGTGAAGGACGGGA........................................................................... 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................GGTGGCGGGCTCCCTGGCTG........................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGACAATCGGGACCCCGGCGT............................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................GATGCCGTGGAGCGTGGTCC.................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr13:58023075-58023250 - mmu-mir-874 CCAGTCTTCTA-CTCTAC-TGGACACACTTCCTTCGGATGAATTTTT-TGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--ACTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCTTTCTGCCCAGCTCAC-----CTGTCATGGAAGA--GAGTTTGGACAC--ACT---CC
cavPor3 scaffold_17:26200235-26200410 - CAAGTCTTCTGGCTCGACCTCGACTCGCT-CCTTTGGATGAATTTT--TGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--ACTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTTCTGCCCAGCTCAC-----TGGTCATGGAAGA--AAGTTTGGACAC--ACT---CT
dipOrd1 scaffold_14187:17039-17223 - CGAGCCTCCCGTCTCCGCCTGGACGCCCTCCCCGCCGATGAATTTT--GGGTGTTAGCCCTACGGCCCCCACGTA-CAGGGTAAGAGAGACTC--ATATCCTGCCCTGGCCCGAGGGACCGACTGGGCTGGGGCCTGCCT-CTGCCCAGCTCACCCAACTGGCTGTGGAAGAGCGAGTCTGGACAC--ACT---CT
hetGal2 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_1936:94448-94626 - CAAGTCTTCGGGCTCGACCTCAGCATGCT-CCTCCGGATGAC-TTT--CGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTCTGGCTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTCCTGCCCAGCTCAC-----CGGCCATGGAAGA--GAGTTTGGACACCCACT---CT
oryCun2 chr3:19951707-19951886 - CAAGTCTTCTGGCTCGACCTCGACATGCT-CCTCCGGATGACTTTT--CGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTCTGGCTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTCCTGCCCAGCTCAC-----CGGCCATGGAAGA--CAGTTTGGACATCCACT---CT
rn5 chr17:9222137-9222316 + rno-mir-874 CCAGTCTTCTA-CTCTAC-TGGACACACTTCCATTGGATGAATTTTTCTGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--GCTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCTTTCTGCCCAGCTTAC-----CTGTCACGGAAGA--GAGTCTGGACAC--ACACGACT
speTri2 JH393407:4612776-4612951 - CAAGTCTGCTGGCTCGACCTGGACGCCCT-CCTTCGGATGAATTTT--TGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--ACTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTTCTGCCCAGCTCGC-----TGGTCATGGAATA--GAGTTTGGACAT--ACT---CT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
CCAGTCTTCTA-CTCTAC-TGGACACACTTCCTTCGGATGAATTTTT-TGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--ACTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCTTTCTGCCCAGCTCAC-----CTGTCATGGAAGA--GAGTTTGGACAC--ACT---CCSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
Type_A_spermatogonia		SRR069810
pachytene_spermatocytes		SRR069811
round_spermatid		SRR248523
Thy1+_spermatogonia		SRR248524
Thy1+_spermatogonia		SRR248525
Thy1-_somatic_testes_cells		SRR248526
Thy1-_somatic_testes_cells		SRR248527
spermatogonia		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
sertoli_cells		SRR553603
spermatids		SRR553604
spermatocytes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus		SRR1509747
oocyte		SRR1509748
spermatozoa		SRR1509749
zygote		SRR1509750
spermatogonia		SRR1509751
foetal_primordial_germ_cells		SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		SRR1647951
Dgcr8_WT_pachytene_spermatocytes		SRR1647952
Dgcr8_cKO_pachytene_spermatocytes		SRR1647953
Dicer_WT_pachytene_spermatocytes		SRR1647954
Dicer_cKO_pachytene_spermatocytes
....................................................................................................CTGCCCTGGCCCGAGGGACCGAC.........................................................................2313752.0037520000010110210000000000038830132141242502522717223433110375010204126920311712311504651251911421064843574005331000000111010015110000068900000003613290115484750001602334003102804092000010000000000000100238110000000026311612617441000401318100000001020000
....................................................................................................CTGCCCTGGCCCGAGGGACCGA..........................................................................2212719.00271900000020130200000000000045524136154429311011723037794847616342033412718901007731100344091012571321181840016760101000000010000000009123000000038124200032175104000540081622004111801001238000300000000100005001134000000009488814000021742659230000010130011
....................................................................................................CTGCCCTGGCCCGAGGGACCGACT........................................................................241988.0098800001000101100000000000131631371288999760153713180000001310000432000022114157231613153000031000001100002000000000852300000011121500014131111100221231500210220419000101000000200003000012100000002410123700001454000000000000001
....................................................................................................CTGCCCTGGCCCGAGGGACCGACA........................................................................241564.005640000000200000000000000094732339334332402536121200000006000001300000011038080211182200013020000000000000000000001110000000849000000011000110010000000304010000000100010000010001100000000025610500000102000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAGA..............................................................................................................231408.0040800001000000000000000000524201439550013225200000002000003500110003017819610946100425700000000000010000000011000000005810000100000000100000000001101367000100000001100001001000000000001814511000007613110000000110010
....................................................................................................CTGCCCTGGCCCGAGGGACCGAT.........................................................................231339.00339000000004000000000000003227121131770037310000002031000000000000001214000300000002000000001000010000000529100000051401021912000000000120030080411310000000000010000000000100000000057040000120812000000010000001
..............................................................CGGCC-CCACGCACCAGGGTAAG...............................................................................................................221327.003270000000000000000000000069112330351260019181060100011000000020231010301016420122001111000000000000000000000080000000014000002000000010001000010101117000000000000000000000000000000001682100000615000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAC.........................................................................221209.002090000000000000000000000014057021152700101275000000000000021000000000001932115000100000000000100002000000002000000012800010000100000000020010000305600000000000000000000020000000001227100000100000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAA.........................................................................231172.00172000000000010000000000002319816471041003000000001000010010000000010101011000211000000000000000000000008000000027400100511000010000110010010060500000000000000000000000000000000135100000918000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCG...........................................................................211153.00153000000000000000000000007126171117101154566120741000000000010000010110012100010000000000000000000000000300000000000000010000000000002000103000100000000000000000000000000000000722700000322000030000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGA..........................................................................211138.001380100000000000000000000014110715612000000100000000000001000000000011132212100000100000000000001000000006000000011200000000100010000010000000210310000000000000000000000000000000613100000113000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGAC.............................................................................191131.0013100000010000000000000000400306330102002216932844013001000000000001023000000000000001000000000100000001200000000000001041000000000115002102000000000000000000000000001000000000021100000000000000000100000
....................................................................................................CTGCCCTGGCCCGAGGGACCGT..........................................................................221123.001230000000000100000000000016099331371003210100000012000000000000001000000000000001000000000000000000000120000000002000000100000000000000000101104000000000000000001000010000000003251000001004000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAA................................................................................................................21193.009301000000000000000000000312129405100101200000010000001000000000000002000010000000000000000000000000001000000002120000000400000100030000001010100000000000000000000000000000000000000000100100000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGACT........................................................................23186.0086000000000000000000000001034111112700202100000000000000000000000000002111210000000000000000000000000001000000005220000000000001000000000001020030000000000000000000000000000000321100000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTA.................................................................................................................20181.00810000000000000000000000090341030000411143622152001000000000000000000000000000000000000000000000000002000000000000000004320000000000000000000000000000000000000010000000000000411100000000000000000000000
................................................................GCC-CCACGCACCAGGGTAAGA..............................................................................................................21180.008000000000000000000000000102500110001000000000000001310010000001002481135400000000000000000000000000000500000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACC............................................................................20169.0069000000000000000000000004023152300039120001100000000000000000001100001110000000000000000000000000000500000000000012001000000000000000005000000000000000000000000000000000000228000010000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGACA........................................................................23158.0058000000000000000000000005034144600321100000000000000000000000001040121400000000000000000000000000000200000001110000000000000000000000000000000000000000000000000000000000000113000000100000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAA........................................................................24151.0051000000000000000000000003014011120140200000000100000000000000000010000000000120000000000000000000000600000000010000020000002000001000001011300000000000000000000000000000000030000000311000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGA..............................................................................18149.00491000000100000000000000020000110000000311100522000000000000000000000000000001000000000000000000000000200000000100200020000000000003000002000000000000000000000000000000000000014100000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAG.........................................................................23142.0042000000000000000000000004101041100060200000000000001000000001010100010000000000000000000000000000000000000000000000000000000000000000000040100000000000000000000000000000000341100000210000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAT-C.....................................................................26142.00420000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061425400000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACC........................................................................24141.0041000000000000000000000004121125600120100000000000000000000000000010000100000010000000000000000000000100000000000000010000000000000000001000000000000000000000000000000000000310500000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAGT..............................................................................................................23136.0036000000000000000000000009033012000000100000000000001000000000001020001000010000000000000000000000000300000001000000010000000001000000001000200000000000000000000000000000000000000000110000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACG........................................................................24136.0036000000000000000000000003020002100443200000000000000000000000000000021000010000000000000000000000000200000001000000010000000000000000001000000000000000000000000000000000000311100000000000000000000000
..................................................................................................TCCTGCCCTGGCCCGAGGGACCGA..........................................................................24135.00350000000000000000000000016076300000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAT-......................................................................25128.0028000010000000000000000009010001200300000000000000000000000000022100000100000000000000000000000000000200000000000001010000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGTT.........................................................................23127.0027000000000000000000000001021010300010000000000000000000000000000000000000000000000000000000000000000100000001010000000000000000000000000060000000000000000000000000000000000020000000304000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGC..........................................................................22125.0025000000000000000000000004015001100001000320100000100100000000000000000000000000000000000000100000001100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................CCTGCCCTGGCCCGAGGGACCGA..........................................................................23125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000000250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GGCC-CCACGCACCAGGGTAAGA..............................................................................................................22122.0022000000000000000000000001000000100001000000000000000000000000000072202000010100000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000110000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAGA........................................................................24121.0021000000000000000000000000001010100221000000000000000000000000000000010000020000000000000000000000000100000000100000000000000000000000000011000000000000000000000000000000000130100000100000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAT.........................................................................22119.0019000000000000000000000001011012010000000000000000000000000000010000000000000000000000000000000000000200000000100000000000000000000000000000330000000000000000000000000000000000000000200000000000000000
................................................................GCC-CCACGCACCAGGGTAAG...............................................................................................................20117.0017000000000000000000000000000000100000000000000000000000000000000073211000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGAA.............................................................................19216.50330000000100000000000000000001000000010410000102400000000000000001000000010000000001000000000000000000100000000000000000001000000000004000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTT-T.....................................................................26116.0016000000000000000000000001001033300100000000000000000000000000000000000000000000000000000000000000000100000000010000000100000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTT-......................................................................25115.0015000000000000000000000002010021000011000000000000000000000000001010011000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGTA.........................................................................23115.0015000000000000000000000003000010100010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000030000000101000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACT............................................................................20113.0013000000001000000000000002021000010000000000000000000000000000001000000000000000000000000000000000001000000000000000000100000000000000000010000000000000000000000000000000000010000000001000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAA-......................................................................25113.0013000000000010000000000000030000000000000000001010000000000000010000012000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000010000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGATA........................................................................24113.0013000000001000000000000002000001100100000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010100000000000000000000000000000000010000000010001000000000000
...................................................................................................CCTGCCCTGGCCCGAGGGACCGACT........................................................................25113.00130000000000000000000000000000000000000000000000000000000000000010000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGAT.............................................................................19113.0013000000000000000000000001010000000000070000001010000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CCTGCCCTGGCCCGAGGGACCGAC.........................................................................24113.00130000000000000000000000000010000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAGAT.............................................................................................................24113.0013000000000000000000000003010000000000000000000000000001010000000211100000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACA............................................................................20112.0012000000000000000000000000020001000100020000000000000000000011000000000000000000000000000000000000000000000000000000010010000000011000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAT................................................................................................................21111.0011000000000000000000000004020000000000000100000000100000000000000000000000000000000000000000000000001000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAT-A.....................................................................26111.0011000000001000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113000000000
..............................................................CGGCC-CCACGCACCAGGGTAAGAA.............................................................................................................24110.0010000000000000000000000005010000000000100000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGT..................................................................................................................1919.009000000000000000000000002000110000000010000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAA.........................................................................2219.009000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000120000000000000000000000000010020000000000000000000000000000000001000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAA...............................................................................................................2218.008000000000000000000000002021100010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAG........................................................................2418.008000000000000000000000002000011000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001000000010000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACGT-......................................................................2518.008000000001000000000000000000000100100000000000000000000000000010000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCG...........................................................................2018.008000000000000000000000000010000100100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACGA-......................................................................2517.007000000000000000000000001000011000020000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGG..........................................................................2217.007000000000000000000000001010000000100000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAT...............................................................................................................2216.006000000000000000000000000012100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGT..........................................................................2116.006000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030000000000000000000000000000000000000000001000000000000000
...................................................................................................CCTGCCCTGGCCCGAGGGACCGAT.........................................................................2416.006000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GCCCTGGCCCGAGGGACCGAC.........................................................................2116.006000000000000000000000000000010100001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGACTT-......................................................................2416.006000000000000000000000000000001200000000000000000001100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGG...............................................................................1716.006000000000000000000000000000000100011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000
.........................................................................................................CTGGCCCGAGGGACCGAC.........................................................................1816.006000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000110100000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGC..........................................................................2115.005000000000000000000000001001000000000000100000000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGCA.........................................................................2315.005000000000000000000000003000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAGT-......................................................................2515.005000000000000000000000000000000000020000000000000000000000000000100000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTA-......................................................................2515.005000000000000000000000001010000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGACC........................................................................2315.005000000000000000000000001000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTT-TT....................................................................2714.004000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGATAT-......................................................................2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAGA-......................................................................2514.004000000000000000000000000000001000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................GGCC-CCACGCACCAGGGTAAG...............................................................................................................2114.004000000000000000000000001000000000000000000000000000000000000000001000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAAT-......................................................................2514.004000000000000000000000002000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAGATT............................................................................................................2514.004000000000000000000000000000100000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGTAA........................................................................2414.004000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAT-T.....................................................................2614.004000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................CCTGCCCTGGCCCGAGGGACCG...........................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GCGGCC-CCACGCACCAGGGTAAGA..............................................................................................................2413.003000000000000000000000000000000000100000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GCGGCC-CCACGCACCAGGGTAAGATC............................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000
........................................................................................................CCTGGCCCGAGGGACCGAC.........................................................................1913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000001000000000000000
.............................................................GCGGCC-CCACGCACCAGGGTAAG...............................................................................................................2313.003000000000000000000000000001000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAAAT-......................................................................2413.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GCC-CCACGCACCAGGGTAA................................................................................................................1913.003000000000000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GCGGCC-CCACGCACCAGGGTA.................................................................................................................2113.003000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCC...........................................................................2113.003000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAC........................................................................2413.003000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTA-T.....................................................................2613.003000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTA-AA....................................................................2713.003000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTA-A.....................................................................2613.003000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAGA........................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAG.........................................................................2212.002000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
..................................................................................................TCCTGCCCTGGCCCGAGGGACCGAC.........................................................................2512.002000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAGG........................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................TGCCCTGGCCCGAGGGAC.............................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGCT.........................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGTAG........................................................................2412.002000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................CCCTGGCCCGAGGGACCGACT........................................................................2112.002000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAGAC.............................................................................................................2412.002000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTC-......................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTG-A.....................................................................2612.002000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACGA-T.....................................................................2612.002000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGATC........................................................................2412.002000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGTTA........................................................................2412.002000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACCT-......................................................................2512.002000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................CGGCC-CCACGCACCAGGGTAAC...............................................................................................................2212.002000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTT-A.....................................................................2612.002000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAGC........................................................................2412.002000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
cavPor3
CAAGTCTTCTGGCTCGACCTCGACTCGCT-CCTTTGGATGAATTTT--TGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--ACTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTTCTGCCCAGCTCAC-----TGGTCATGGAAGA--AAGTTTGGACAC--ACT---CTSizeHit CountTotal NormTotal
No Reads
dipOrd1
CGAGCCTCCCGTCTCCGCCTGGACGCCCTCCCCGCCGATGAATTTT--GGGTGTTAGCCCTACGGCCCCCACGTA-CAGGGTAAGAGAGACTC--ATATCCTGCCCTGGCCCGAGGGACCGACTGGGCTGGGGCCTGCCT-CTGCCCAGCTCACCCAACTGGCTGTGGAAGAGCGAGTCTGGACAC--ACT---CTSizeHit CountTotal NormTotal
No Reads
hetGal2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
CAAGTCTTCGGGCTCGACCTCAGCATGCT-CCTCCGGATGAC-TTT--CGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTCTGGCTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTCCTGCCCAGCTCAC-----CGGCCATGGAAGA--GAGTTTGGACACCCACT---CTSizeHit CountTotal NormTotal
No Reads
oryCun2
CAAGTCTTCTGGCTCGACCTCGACATGCT-CCTCCGGATGACTTTT--CGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTCTGGCTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTCCTGCCCAGCTCAC-----CGGCCATGGAAGA--CAGTTTGGACATCCACT---CTSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
....................................................................................................CTGCCCTGGCCCGAGGGACCGAC.........................................................................23149.0049481
....................................................................................................CTGCCCTGGCCCGAGGGACCGA..........................................................................2216.00660
.....................................................................................................TGCCCTGGCCCGAGGGACCGA..........................................................................2116.00660
.....................................................................................................TGCCCTGGCCCGAGGGACCGAC.........................................................................2215.00550
....................................................................................................CTGCCCTGGCCCGAGGGACCGAT.........................................................................2314.00440
................................................................GCC-CCACGCACCAGGGTAAGAT.............................................................................................................2212.00220
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAT-......................................................................2511.00110
..............................................................CGGCC-CCACGCACCAGGGTAAGAT.............................................................................................................2411.00110
.................................................................................................TTCCTGCCCTGGCCCGAGGGACCGAC.........................................................................2611.00110
.....................................................................................................TGCCCTGGCCCGAGGGACCGAT.........................................................................2211.00110
.....................................................................................................TGCCCTGGCCCGAGGGACCGACT........................................................................2311.00110
.....................................................................................AGAGACTCTGGCTTCCTGCCCTGGCCCGAGGGACCGAC.........................................................................3811.00110
.....................................................................................................TGCCCTGGCCCGAGGGAC.............................................................................1811.00110
....................................................................................................CTGCCCTGGCCCGAGGGACCG...........................................................................2111.00101
....................................................................................................CTGCCCTGGCCCGAGGGAA.............................................................................19100.20220
rn5
CCAGTCTTCTA-CTCTAC-TGGACACACTTCCATTGGATGAATTTTTCTGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--GCTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCTTTCTGCCCAGCTTAC-----CTGTCACGGAAGA--GAGTCTGGACAC--ACACGACTSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
....................................................................................................CTGCCCTGGCCCGAGGGACCGA..........................................................................221124.00124000
....................................................................................................CTGCCCTGGCCCGAGGGACCG...........................................................................21153.0053000
....................................................................................................CTGCCCTGGCCCGAGGGACC............................................................................20125.0025000
..............................................................CGGCC-CCACGCACCAGGGTAA................................................................................................................21120.0020000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAC.........................................................................23117.0017000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACT........................................................................24113.0013000
.....................................................................................................TGCCCTGGCCCGAGGGACCGA..........................................................................21111.0011000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTT-......................................................................25110.0010000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACA........................................................................24110.0010000
.....................................................................................................TGCCCTGGCCCGAGGGACCGACT........................................................................2318.008000
....................................................................................................CTGCCCTGGCCCGAGGGACCGT..........................................................................2217.007000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAT.........................................................................2315.005000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTA-......................................................................2515.005000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAA.........................................................................2315.005000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAA-......................................................................2514.004000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTT-T.....................................................................2613.003000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAA........................................................................2413.003000
....................................................................................................CTGCCCTGGCCCGAGGGACCGTA.........................................................................2313.003000
..............................................................CGGCC-CCACGCACCAGGGT..................................................................................................................1913.003000
.....................................................................................................TGCCCTGGCCCGAGGGACCGACTT-......................................................................2413.003000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAC.........................................................................2213.003000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACAT-......................................................................2513.003000
.....................................................................................................TGCCCTGGCCCGAGGGACCGAA.........................................................................2212.002000
.....................................................................................................TGCCCTGGCCCGAGGGACCGACTA-......................................................................2412.002000
..............................................................CGGCC-CCACGCACCAGGGTAAG...............................................................................................................2211.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGCA.........................................................................2311.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAAA-......................................................................2511.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTA-A.....................................................................2611.001000
....................................................................................................CTGCCCTGGCCCGAGGG...............................................................................1711.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGATAA-......................................................................2511.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGACTT-TT....................................................................2711.001000
.....................................................................................................TGCCCTGGCCCGAGGGACCGT..........................................................................2111.001000
....................................................................................................CTGCCCTGGCCCGAGGGACA............................................................................2011.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCC...........................................................................2111.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAAT-......................................................................2511.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAG.........................................................................2311.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGTT.........................................................................2311.001000
....................................................................................................CTGCCCTGGCCCGAGGGACCGAAGT-......................................................................2530.672000
......................................................................................................GCCCTGGCCCGAGGGACCGACAT-......................................................................2320.501000
speTri2
CAAGTCTGCTGGCTCGACCTGGACGCCCT-CCTTCGGATGAATTTT--TGGTGTTAGCCCTGCGGCC-CCACGCACCAGGGTAAGAGAGACTC--ACTTCCTGCCCTGGCCCGAGGGACCGACTG-GCTG-GGCCTGCCTTCTGCCCAGCTCGC-----TGGTCATGGAATA--GAGTTTGGACAT--ACT---CTSizeHit CountTotal NormTotal
No Reads

Generated: 06/17/2015 at 03:05 PM