ID:

mmu-mir-7116

 Coordinate:

chr11:100478411-100478480 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-14.7 -14.7 -14.5

Sense Strand Reads

TACAGAGTATACAAATAACATGCCTATAAACCACCACAGTAATAGTGACTAACAGTGAAGACATCAGGAAAAAAAAAATAAGAAATGATAAACCTTTTTTTTTTTCCTTTGCCTTCTCAGAAGCCAAATCTTATCCTGAATGTGGACGGCTTCATCGGCGTTGCGTTTGT
**************************************.......((.((......((((.((..(((((((((((((.................))))))))))))).)).)))).....)).)).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR1509750
spermatogonia		 SRR1509751
foetal_primordial_germ_cells		 SRR391852
embryo		 SRR391853
embryo		 SRR391851
embryo		 SRR1509748
spermatozoa		 SRR391845
embryo		 SRR391846
embryo		 SRR039610
brain		 SRR116846
epididymis		 SRR248527
spermatogonia		 SRR391848
embryo		 SRR391849
embryo		 SRR038744
brain		 SRR069809
Type_A_spermatogonia		 SRR248523
Thy1+_spermatogonia		 SRR391847
embryo		 GSM475281
testes		 GSM510444
brain		 SRR040488
liver		 SRR042471
spleen		 SRR065058
pancreas		 SRR206942
brain		 SRR248524
Thy1+_spermatogonia		 SRR248525
Thy1-_somatic_testes_cells		 SRR391850
embryo		 SRR206941
brain		 SRR1509749
zygote		 GSM509279
testes		 SRR038741
brain		 SRR039185
fibroblast		 SRR042475
fibroblast		 SRR042480
kidney		 SRR059769
spleen		 SRR059770
spleen		 SRR059773
spleen		 SRR095855BC4
heart		 SRR206940
brain		 SRR248526
Thy1-_somatic_testes_cells		 SRR553585
kidney		 SRR553603
spermatids		 SRR037928
embryo		 SRR073954
blood		 SRR037902
testes		 SRR065059
pancreas
.........................................................................................................................................GAATGTGGACGGCTTCATCGGCGTTATC..... 28 3 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TATCCTGAATGTGGACGGCTTATC............... 24 3 1 12.00 12 0 10 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCAGA................................................. 23 0 1 12.00 12 0 0 1 4 0 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCAG.................................................. 22 0 1 11.00 11 0 0 2 1 1 0 1 0 0 2 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTTATC..... 29 3 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCAGATC............................................... 25 2 1 8.00 8 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCT................... 19 0 1 8.00 8 0 0 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAATCTTATCCTGAATGTGGACGGCTTCATC.............. 31 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCAGT................................................. 23 1 1 6.00 6 0 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCTCAG.................................................. 23 0 1 5.00 5 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTT.................. 20 0 1 5.00 5 0 0 2 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCTCA................................................... 22 0 1 5.00 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTCAT............... 23 0 1 5.00 5 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CTGAATGTGGACGGCTTCATCGGATC......... 26 3 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTATC...... 28 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCCAAATCTTATCCTGAATGTGGACGGCTTCATCGGCGATC....... 41 2 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGGACGGCTTCATCGGCGT......... 20 0 1 4.00 4 0 0 1 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAAATCTTATCCTGAATGTGGACGGCTTATC............... 31 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTTTTCCTTTGCCTTCTCAGTATC.............................................. 25 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTTTTCCTTTGCCTTCTCAGA................................................. 22 0 1 4.00 4 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTC................. 21 0 1 4.00 4 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCTCAGA................................................. 24 0 1 3.00 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCAGTATC.............................................. 26 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGAAGACATCAGGAAAAAAAAA............................................................................................. 24 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GAATGTGGACGGCTTCATCGGCGT......... 24 0 1 3.00 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGAAGACATCAGGAAAAAAAA.............................................................................................. 21 0 1 3.00 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAAATCTTATCCTGAATGTGGACGGCATC................. 29 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCCAAATCTTATCCTGAATGTGGACGGCTTCATCGGCGATA....... 41 2 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGAAGACATCAGGAAAAAAA............................................................................................... 22 0 1 3.00 3 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GAATGTGGACGGCTTCATCGGCGTTATA..... 28 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGCCAAATCTTATCCTGAATGTGGACGGCATC................. 32 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CCTGAATGTGGACGGCTTCATC.............. 22 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TATCCTGAATGTGGACGGCT................... 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGAAGACATCAGGAAAAAA................................................................................................ 21 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAATCTTATCCTGAATGTGGACGGCTTCATA.............. 31 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTCATCGGATC......... 29 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CAGTGAAGACATCAGGAAAAAAAAA............................................................................................. 25 0 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCATC........... 23 2 2 2.00 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GGACGGCTTCATCGGCGTT........ 19 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCA................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGATC.................. 20 2 7 1.14 8 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTTATCCTGAATGCGGACGGCTT.................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCCAAATCTTATGCTGAATGTGGACGGCTTCATCGGCGATC....... 41 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGAAGACATCAGGAAAAAAAA.............................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAAATCTTATCCTGAATGTGGACGGCTTC................. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCTCAATA................................................ 25 2 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CAGTGAAGACATCAGGAAA................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTAAATGTGGACGGCTT.................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTTATCCTGAATGTGGACGGCTT.................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTATCCTGAATGTGGACGGCTTC................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTTATA..... 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TATCCTGAATGTGGACGGCTTC................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTCATA.............. 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGGACGGCTTCATCGGC........... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................TTTTTCCTTTGCCTTCTCAGA................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCGGT........... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GAATGTGGACGGCTTCATCGGCGTT........ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CAGTGAAGACATCAGGAAAAAA................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CTGAATGTGGACGGCTTCA................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGAAGACATCAGGAAAAAA................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GAAGCCAAATCTTATCCTGAATGTGGACGGCATC................. 34 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAAATCTTATCCTGAATGTGAACGGCATC................. 29 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTCATCG............. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTCA................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTCATC.............. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CAAATCTTATCCTGAATGTGGACGGCTTT................. 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTT........ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGCCAAATCTTATCCTGAATGTGGACGGCATA................. 32 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCGG............ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGGACGGCTTCATCGGCGTT........ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AATCTTATCCTGAATGTGGACGGCTTCATATA............ 32 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGGACGGCTTCATCGGCGTTGCGT.... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTATCCTGAATGTGGACGGCTTCATCGC............ 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TCAGTGAAGACATCAGGAAAAAA................................................................................................ 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AATCTTATCCTGAATGTGGACGGCTTCATCG............. 31 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................AGTGAAGCCATCAGGAAAAAA................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGAAGACATCAGGAAAAA................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTATCCTGAATGTGGACGGCT................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCTCAGTA................................................ 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCTCAA.................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTTTTTTTTCCTTTGCCTTCTCA................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGAAGACATCAGGATAACAAA.............................................................................................. 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCCGAATC.............................................. 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GAATGTGGACGGCTTCATCGGC........... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTTG....... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTATCCTGAATGTGGACGGCTTCAT............... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTATCCTGAATGTGGACGGCTTCATC.............. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................AAATCTTATCCTGAATGTGGACGGCT................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................CAAATCTTATCCTGAATGGGGACGGC.................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CAGTGAAGACATCACGAAAAAAAAA............................................................................................. 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CGGCTTCATCGGCGTTGCG..... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTCAGATA............................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGC.................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TATCCTGAATGTGGACGGC.................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TCTTATCCTGAATGTGGACGGCTTC................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTTCATCGGCGTTGCGATC.. 36 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCT..................................................... 20 0 3 0.67 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTTTTTCCTTTGCCTTCTC.................................................... 20 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................ACCACATTAAGAGTGACTAACAA................................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................TATCCTGAATGTGGACGGCTTATA............... 24 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATCCTGAATGTGGACGGCTATC................ 22 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CTGAATGTGGACGGCATC................. 18 1 10 0.30 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................GTGACTGACAGTGAAGACA........................................................................................................... 19 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................AGTGACTGACAGTGAAGAC............................................................................................................ 19 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CTGAATGTGGACGGCTATA................ 19 2 12 0.17 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TCTGACTGAGGACGGCTTCATC.............. 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TAGTGCCTAACAGTGAAG.............................................................................................................. 18 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................ACAAATGATAAACCTTTTT....................................................................... 19 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................CCTGAATGTGGACGGCATC................. 19 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTCCTTTGCCTTCTCAATC................................................ 25 3 16 0.13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCCTGAATGTGGACGGCTATC................ 21 3 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGGACGGCTTGATC.............. 15 1 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTTTTTTTTTCCTTTGCC......................................................... 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GAATGTGGACGGCATC................. 16 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATGTCTCATATGTTTATTGTACGGATATTTGGTGGTGTCATTATCACTGATTGTCACTTCTGTAGTCCTTTTTTTTTTATTCTTTACTATTTGGAAAAAAAAAAAGGAAACGGAAGAGTCTTCGGTTTAGAATAGGACTTACACCTGCCGAAGTAGCCGCAACGCAAACA
***********************************.......((.((......((((.((..(((((((((((((.................))))))))))))).)).)))).....)).)).........************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR1509750
spermatogonia		 SRR073954
blood		 SRR345197
brain		 SRR345201
brain		 SRR073955
blood		 SRR391845
embryo		 SRR248524
Thy1+_spermatogonia		 SRR1509751
foetal_primordial_germ_cells		 SRR345200
brain		 SRR345199
brain		 SRR345198
brain		 SRR039152
muscle		 SRR345204
brain		 SRR390298
fibroblast		 SRR039153
muscle		 SRR391853
embryo		 SRR391846
embryo		 SRR040488
liver		 SRR059765
thymus		 SRR553584
heart
......................................................................................CTATTTGAAAAAAAAAAAAGGA.............................................................. 22 1 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GCCGAAGCAGCCGCAA........ 16 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTCCGTAGCAGCCGCAACGCA.... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AAGAGTCTTCGGTCTAG........................................ 17 1 20 0.65 13 0 10 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CCACCTGCCGAAGTAGC............. 17 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AACGGTAGAGTCTTCGGTCTAG........................................ 22 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GAAGAGTCTTCGGTCTAG........................................ 18 1 20 0.40 8 0 7 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGAAGAGTCTTCGGTCTAG........................................ 19 1 9 0.33 3 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................AGAGTCTTCGGTTTAG........................................ 16 0 7 0.29 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CTACGGTTTGGAATAGGGCTT.............................. 21 3 20 0.20 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TCGGTTAAGAATAGGGCTT.............................. 19 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................TTGTCATTATCACTGATTGCGA.................................................................................................................. 22 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................GAAGAGCCTGCGGTTTAG........................................ 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CCGTAGGAGCCGCAACGCAT... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................GAAGAGTCTTCGGT............................................ 14 0 20 0.10 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGGAAAAAAAAAAAGGAAA............................................................ 20 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................AAAAAAAAAGGAAATGGAAGA..................................................... 21 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................TCCTCCTGCCGAAGTAGCCGT.......... 21 3 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CGCAACGCAAA.. 11 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGAAGAGTCTTCGGTCTA......................................... 18 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CGGTTTAGAATAGGGCTC.............................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................AGCAGAGTCTTCGGTTTAG........................................ 19 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GCCGCAACGC..... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GTCTTCGGTTTA......................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CCGCAACGCTAACA 14 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................AGAGTCTTCGGTCTAGGATA.................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................TCGGTTAAGAATAGGGCT............................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................AAAAAAAAGGAACCGGATGA..................................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................TCGGCTTAGAATAGGC................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................AGAGTCTTCGGCTTAG........................................ 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr11:100478361-100478530 - mmu-mir-7116 TtgtGtGTtTtgttt----TttgtTGggTtTtAACCACCACAGTAATAG--TGACTAACAGTGAAGACATCAGGAAAAAAAAAATAAGAAATG--ATAAACCTTTTTTTTTTT------CCTTTGCCTTCTCAGAAGCCAAATCTTATCCTGAATGTGGACGGCTTCATCGGCGTTGCGTTTGT
cavPor3 scaffold_53:11954409-11954519 - gT------------------------------------------------------GtCAGTGGAGATGCTG--CGAGGATAAATGTGAGGTG--GTGATGACACT---------------GTGCCCCTTCCAGAAACCAAACCTGATCCTGAACGTGGACGGGCTCATCGGCGTGGCATTTGT
dipOrd1 Unknown T-------------------------------------------------------AACATTGAAGATG--AAAAAATTAAAAGAGAGAAATG--ACAAA--TGTTTTGAATTCTGTTTATTTTCCCTTCCCAGAAGCCGAATCTCATTCTAAATGTAGATGGCTTCATTGGAGTTGCATTTGT
hetGal2 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_3710:5405-5509 - A-----------------------------------------------------------------------AGAAAAAAAAAATGAGAACTC--ACACAACTGCTTTGAATT------GTTCACCTTTCCCAGAAACCCAATCTTATCCTGAATGTCGATGGTTTCATTGGAGTTGCTTTTGT
oryCun2 Unknown TAA-------------------ATAGTGT-TCAAAATTTATATTAATAGTTATGGTGA---------------CAAAGAAACAGTGAGAAGTCGTATGTAACTGCAATGACTT------TTTTACCCTTCTCAGAAACCAAATCTTATCCTGAATGTAGATGGCTTCATCGGAGTTGCCTTTGT
rn5 chr10:88187396-88187565 - TtgtGttgtTtgtttTGtgtTTGTtgggt-gtAACCTCTATAGTAATTG--TAGGTAACAGTGAAGC-ATCAGGAAAAAAGAAAAGAGAAATG--ATAAAACTTCTTTTTATT------T--TTGCCCTTTCAGAAGCCAAATCTTATCCTGAACGTGGATGGTTTCATCGGCGTTGCGTTTGT
speTri2 Unknown C--------------------------------------ATAGTAATAG--TA-GTAACAGTGCAAA-ATTT--AAAAAAAAAATGAGAAATG--ATGTAAATGCTTTGAATT------TT-TTGCCTTCCCAGAAACCAAATCTTATCCTGAATGTAGATGGTTTCATCGGAGTTGCGTTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
TtgtGtGTtTtgttt----TttgtTGggTtTtAACCACCACAGTAATAG--TGACTAACAGTGAAGACATCAGGAAAAAAAAAATAAGAAATG--ATAAACCTTTTTTTTTTT------CCTTTGCCTTCTCAGAAGCCAAATCTTATCCTGAATGTGGACGGCTTCATCGGCGTTGCGTTTGTSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
Type_A_spermatogonia		SRR069810
pachytene_spermatocytes		SRR069811
round_spermatid		SRR248523
Thy1+_spermatogonia		SRR248524
Thy1+_spermatogonia		SRR248525
Thy1-_somatic_testes_cells		SRR248526
Thy1-_somatic_testes_cells		SRR248527
spermatogonia		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
sertoli_cells		SRR553603
spermatids		SRR553604
spermatocytes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus		SRR1509747
oocyte		SRR1509748
spermatozoa		SRR1509749
zygote		SRR1509750
spermatogonia		SRR1509751
foetal_primordial_germ_cells		SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		SRR1647951
Dgcr8_WT_pachytene_spermatocytes		SRR1647952
Dgcr8_cKO_pachytene_spermatocytes		SRR1647953
Dicer_WT_pachytene_spermatocytes		SRR1647954
Dicer_cKO_pachytene_spermatocytes
.......................................................................................................................................................GAATGTGGACGGCTTCATCGGCGTTATC.....28115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000
.................................................................................................................................................TATCCTGAATGTGGACGGCTTATC...............24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000
..........................................................................................................TTTTTTT------CCTTTGCCTTCTCAGA.................................................23112.0012000000000000000000000000000001200010000000000000000000000000000000001410000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................TTTTTTT------CCTTTGCCTTCTCAG..................................................22111.0011000000000000000000000001000001000000000000000000000000000000010010112120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTTATC.....2919.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000
..........................................................................................................TTTTTTT------CCTTTGCCTTCTCAGATC...............................................2518.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000000
..................................................................................................................................................ATCCTGAATGTGGACGGCT...................1918.008000000000000000000000000000000000000000000000000000000000000000000022400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AAATCTTATCCTGAATGTGGACGGCTTCATC..............3116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000
..........................................................................................................TTTTTTT------CCTTTGCCTTCTCAGT.................................................2316.006000000000000000000000000000000000000000000000000000000000000000000002100000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................TTTTTTTT------CCTTTGCCTTCTCAG..................................................2315.005000000000000000000000000000000100000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTT..................2015.005000000000000000000000000000000000000000000000000000000000000000010012100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTTTTTTT------CCTTTGCCTTCTCA...................................................2215.005000000000000000000000000000010000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTTCAT...............2315.005000000000000000000000000000000000000000000000000000000000000000002020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CTGAATGTGGACGGCTTCATCGGATC.........2615.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000
...........................................................................................................................................................GTGGACGGCTTCATCGGCGT.........2014.004000000000000000000000000000000000000000000000000000000000000002010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CAAATCTTATCCTGAATGTGGACGGCTTATC...............3114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000
...........................................................................................................TTTTTT------CCTTTGCCTTCTCAGA.................................................2214.004000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTTC.................2114.004000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTTTTTTT------CCTTTGCCTTCTCAGA.................................................2413.003000000000000000000000000000000000000100000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGTGAAGACATCAGGAAAAAAAAA.....................................................................................................2413.003000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GAATGTGGACGGCTTCATCGGCGT.........2413.003000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGAAGACATCAGGAAAAAAAA......................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
...........................................................AGTGAAGACATCAGGAAAAAAA.......................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GAATGTGGACGGCTTCATCGGCGTTATA.....2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
....................................................................................................................................................CCTGAATGTGGACGGCTTCATC..............2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
.................................................................................................................................................TATCCTGAATGTGGACGGCT...................2012.002000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGTGAAGACATCAGGAAAAAA........................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AAATCTTATCCTGAATGTGGACGGCTTCATA..............3112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTTCATCGGATC.........2912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
..........................................................CAGTGAAGACATCAGGAAAAAAAAA.....................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GGACGGCTTCATCGGCGTT........1912.002000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTTTTTT------CCTTTGCCTTCTCA...................................................2112.002000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGTGAAGACATCAGGAAAAAAAA......................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CAAATCTTATCCTGAATGTGGACGGCTTC.................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................CAGTGAAGACATCAGGAAA...........................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CTTATCCTGAATGTGGACGGCTT..................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................TTATCCTGAATGTGGACGGCTTC.................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTTATA.....2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................TATCCTGAATGTGGACGGCTTC.................2211.001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTTCATA..............2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................................GTGGACGGCTTCATCGGC...........1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................TTTTT------CCTTTGCCTTCTCAGA.................................................2111.001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGAATGTGGACGGCTTCATCGGT...........2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................GAATGTGGACGGCTTCATCGGCGTT........2511.001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CAGTGAAGACATCAGGAAAAAA........................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CTGAATGTGGACGGCTTCA................1911.001000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGAAGACATCAGGAAAAAA........................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTTCATCG.............2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTTCA................2211.001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTTCATC..............2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................CAAATCTTATCCTGAATGTGGACGGCTTT.................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTT........2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................TGAATGTGGACGGCTTCATCGG............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................GTGGACGGCTTCATCGGCGTT........2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................AATCTTATCCTGAATGTGGACGGCTTCATATA............3211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................................GTGGACGGCTTCATCGGCGTTGCGT....2511.001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TTATCCTGAATGTGGACGGCTTCATCGC............2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................AATCTTATCCTGAATGTGGACGGCTTCATCG.............3111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................AGTGAAGACATCAGGAAAAA.........................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TTATCCTGAATGTGGACGGCT...................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTTTTTTT------CCTTTGCCTTCTCAA..................................................2311.001000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TTTTTTTTT------CCTTTGCCTTCTCA...................................................2311.001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GAATGTGGACGGCTTCATCGGC...........2211.001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGAATGTGGACGGCTTCATCGGCGTTG.......2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................TTATCCTGAATGTGGACGGCTTCAT...............2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................TTATCCTGAATGTGGACGGCTTCATC..............2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................AAATCTTATCCTGAATGTGGACGGCT...................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................CGGCTTCATCGGCGTTGCG.....1911.001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTTTTTT------CCTTTGCCTTCTCAGATA...............................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................ATCCTGAATGTGGACGGC....................1811.001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TATCCTGAATGTGGACGGC....................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TCTTATCCTGAATGTGGACGGCTTC.................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................TTTTTTTT------CCTTTGCCTTCT.....................................................2030.672000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTTTTTT------CCTTTGCCTTCTC....................................................2020.501000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TATCCTGAATGTGGACGGCTTATA...............2430.331000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................ATCCTGAATGTGGACGGCTATC................2230.331000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................TTTTTTTT------CCTTTGCCTTCTCAATC................................................25160.132000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000
...................................................................................................................................................TCCTGAATGTGGACGGCTATC................21200.102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
......................................................................................................TTTTTTTTTTT------CCTTTGCC.........................................................19200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
cavPor3
gT------------------------------------------------------GtCAGTGGAGATGCTG--CGAGGATAAATGTGAGGTG--GTGATGACACT---------------GTGCCCCTTCCAGAAACCAAACCTGATCCTGAACGTGGACGGGCTCATCGGCGTGGCATTTGTSizeHit CountTotal NormTotal
No Reads
dipOrd1
T-------------------------------------------------------AACATTGAAGATG--AAAAAATTAAAAGAGAGAAATG--ACAAA--TGTTTTGAATTCTGTTTATTTTCCCTTCCCAGAAGCCGAATCTCATTCTAAATGTAGATGGCTTCATTGGAGTTGCATTTGTSizeHit CountTotal NormTotal
No Reads
hetGal2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
A-----------------------------------------------------------------------AGAAAAAAAAAATGAGAACTC--ACACAACTGCTTTGAATT------GTTCACCTTTCCCAGAAACCCAATCTTATCCTGAATGTCGATGGTTTCATTGGAGTTGCTTTTGTSizeHit CountTotal NormTotal
No Reads
oryCun2
TAA-------------------ATAGTGT-TCAAAATTTATATTAATAGTTATGGTGA---------------CAAAGAAACAGTGAGAAGTCGTATGTAACTGCAATGACTT------TTTTACCCTTCTCAGAAACCAAATCTTATCCTGAATGTAGATGGCTTCATCGGAGTTGCCTTTGTSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
TtgtGttgtTtgtttTGtgtTTGTtgggt-gtAACCTCTATAGTAATTG--TAGGTAACAGTGAAGC-ATCAGGAAAAAAGAAAAGAGAAATG--ATAAAACTTCTTTTTATT------T--TTGCCCTTTCAGAAGCCAAATCTTATCCTGAACGTGGATGGTTTCATCGGCGTTGCGTTTGTSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
C--------------------------------------ATAGTAATAG--TA-GTAACAGTGCAAA-ATTT--AAAAAAAAAATGAGAAATG--ATGTAAATGCTTTGAATT------TT-TTGCCTTCCCAGAAACCAAATCTTATCCTGAATGTAGATGGTTTCATCGGAGTTGCGTTTGTSizeHit CountTotal NormTotal
No Reads

Generated: 06/17/2015 at 01:38 PM