ID:

mmu-mir-7093

 Coordinate:

chrX:134757631-134757731 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-45.1

Sense Strand Reads

TGTCTCTCTCTGACTCTGTGTGTATGAATGTGCTCTTGGGGGTGGGGGCGGTGGGCAGGATGACAGAAGGAAAACCTATCAGATAGTTTGTTCATAATCCTTCTCTCTCAACAGCACTTAGTGTCCATGTTTTCCATCTGTCATCCTGCAGGTCTGCTGTAGCAGGTGGCACTGCTTGAACCAAGGGAGGAACTTTCCCCC
**************************************...((...(((((...(((((((((((((.(((((((....((...((((((((.................))))).)))...)).....))))))).)))))))))))))....)))))...))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553582
brain		 SRR553583
cerebellum		 SRR206940
brain		 SRR553602
testes		 SRR039185
fibroblast		 SRR391853
embryo		 SRR038741
brain		 SRR206939
brain		 SRR391852
embryo		 SRR206941
brain		 SRR038744
brain		 SRR206942
brain		 GSM510444
brain		 SRR391851
embryo		 SRR039183
fibroblast		 SRR039184
fibroblast		 SRR040488
liver		 SRR553585
kidney		 SRR039186
fibroblast		 SRR039610
brain		 SRR037920
embryo		 SRR248526
testes		 SRR345198
brain		 SRR391845
embryo		 SRR065059
pancreas		 SRR345199
brain		 SRR345201
brain		 SRR042469
lymph		 SRR391848
embryo		 SRR345197
brain		 SRR345203
brain		 SRR553584
heart		 SRR042471
spleen		 SRR042481
pancreas		 SRR059769
spleen		 SRR065046
liver		 SRR065058
pancreas		 SRR073954
blood		 SRR391849
embryo		 SRR039153
muscle		 SRR065054
jejunum		 SRR345205
brain		 SRR014234
ovary		 SRR037921
embryo		 SRR037922
embryo		 SRR039152
muscle		 SRR042456
bone marrow		 SRR042461
bone marrow		 SRR042462
bone marrow		 SRR042465
spleen		 SRR042470
lymph		 SRR042477
brain		 SRR042478
lung		 SRR042484
salivary gland		 SRR060845
brain		 SRR065052
jejunum		 SRR095855BC7
heart		 SRR116846
epididymis		 SRR248525
testes		 SRR391847
embryo		 SRR037906
brain		 SRR248524
testes		 SRR345196
brain		 SRR345207
brain		 SRR248527
testes		 SRR037902
testes		 SRR345200
brain		 SRR037925
embryo
..................................................................................................................................TTTCCATCTGTCATCCTGCAG.................................................. 21 0 1 102.00 102 17 18 11 10 2 2 5 11 0 6 0 7 1 0 0 1 0 0 0 1 0 4 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAGT................................................. 22 1 1 90.00 90 4 0 7 2 10 4 5 2 6 2 6 1 5 2 7 6 5 2 5 0 3 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAGA................................................. 22 1 1 28.00 28 3 0 1 1 0 6 1 0 4 0 3 0 0 3 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGATGACAGAAGGAAA................................................................................................................................ 20 0 1 9.00 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 0 0 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGAAAACCT............................................................................................................................ 22 0 1 7.00 7 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAGTA................................................ 23 2 1 6.00 6 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAGC................................................. 22 1 1 5.00 5 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGC.................................................... 19 0 1 4.00 4 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGATGACAGAAGGAAAAC.............................................................................................................................. 22 0 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAGTT................................................ 23 1 1 4.00 4 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................GGGCAGGATGACAGAAGGAAA................................................................................................................................ 21 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GCAGGATGACAGAAGGAAAAC.............................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAT.................................................. 21 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCA................................................... 20 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGAAAA............................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGACGACAGAAGGAAA................................................................................................................................ 20 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTCCATCTGTCATCCTGCAGTT................................................ 22 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................GGGCAGGATGACAGAAGGAAAAC.............................................................................................................................. 23 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGATGACAGAAGGA.................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCCGT................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGATGACAGAAGGAA................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAAAT................................................ 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGAAAACCTT........................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GCAGGATGACAGAAGGAAAACC............................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................GGGCAGGATGACAGAAGGAAAA............................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTCCATCTGTCATCCTGCAGA................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTTTCCATCTGTCATCCTGCAT.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGAAAACC............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TGTTTTCCATCTGTCATCCTGC.................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTATCATCCTGCAG.................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGATGACAGGAGGAAA................................................................................................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGGAAACCT............................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGATGACAGAAGGAAAAA.............................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................GGGCAGGATGACCGAAGG................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCATT................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGAAAACCC............................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GTTTTCCATCTGTCATCCTGC.................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................GGGCAGGATGACAGAAGGAAAACT............................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCAGGATGACAGAAGGAAAA............................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACATAAGGAAAACCT............................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGGATGACAGAAGGAAAACCTA........................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GTTTTCCATCTGTCATCCTG..................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGAAAAC.............................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCGTCCTGCAG.................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGCAGGTCTGCGGTAGCAGGC.................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCTTGAACCAAGGGAGGAACT....... 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGCCATCCTGCAGT................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCTTGCACCAAGGCAGGAACTATC.... 24 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CTTCCATCTGTCATCCTGCA................................................... 20 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCTTGAACCAAGGGAGGAAC........ 20 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGCTGTAGCAGGTGGCACTGCT......................... 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGGAGGATGACAGAAGGAAA................................................................................................................................ 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TAGCAGGTGGCACTGCTTGAACCAAGT............... 27 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................GGCAGGATGACAGAAGGAAAACA............................................................................................................................. 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGGTGGCACTGCTTGAACC................... 19 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGCTTGAACCAAGGGAGGAACT....... 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATACTGCAGT................................................. 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTTTCATCCTGCAG.................................................. 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGCGGTAGCAGATGGCACTGCT......................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAGAAA............................................... 24 3 6 0.33 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCTGCTGTAGCAGGTGGCA.............................. 19 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCAGTCATCCTGCCG.................................................. 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GAACCAAGGGAGGAACTTTCCCCC 24 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CAAGGGAGGAACTTTCC... 17 0 6 0.33 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
.....................................................GGCTGGATGACAGAAGGAAA................................................................................................................................ 20 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CTTCCATCTGTCATCCTGCAGT................................................. 22 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGCGGTAGGAGGTGGAACTGCTT........................ 23 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCTGTCATCCTGCAGAGA............................................... 24 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................GCTTGAACCAAGGGA............. 15 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGAACCAAGGGAGGCACT....... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................TTTCCATCTGTCGTCCTGCG................................................... 20 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTTCCATCGGTCTTCCTGCAG.................................................. 21 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGGGGTAGCAGGTGGCGCTGCTT........................ 23 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AAGTGCTCTTGGGGGTGG............................................................................................................................................................ 18 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGCGGTAGCAGGTGGCATTG........................... 20 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................TGCAGGACTGCGGTAGCAG.................................... 19 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................GCTCGAACCATGGGATGAACT....... 21 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGACGGAA................................................................................................................................. 17 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................GGCAGGATGACAGAATGTAA................................................................................................................................ 20 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TTGGGGGTGGGGGCGATG.................................................................................................................................................... 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCCAGGATGACAGAAGGA.................................................................................................................................. 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGTCACTGCTTGAACAAAGG............... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GGTCTTCTGTAGCAGGT.................................. 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGGGCAGGACGACAGA...................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGACAGAAGGAG................................................................................................................................. 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACAGAGAGAGACTGAGACACACATACTTACACGAGAACCCCCACCCCCGCCACCCGTCCTACTGTCTTCCTTTTGGATAGTCTATCAAACAAGTATTAGGAAGAGAGAGTTGTCGTGAATCACAGGTACAAAAGGTAGACAGTAGGACGTCCAGACGACATCGTCCACCGTGACGAACTTGGTTCCCTCCTTGAAAGGGGG
***********************************...((...(((((...(((((((((((((.(((((((....((...((((((((.................))))).)))...)).....))))))).)))))))))))))....)))))...))...************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR391851
embryo		 SRR065058
pancreas		 SRR065059
pancreas		 SRR069809
testes		 SRR391852
embryo		 SRR553586
testes		 SRR525238
Blood		 GSM475281
testes		 SRR391848
embryo		 SRR391847
embryo		 SRR040488
liver		 SRR345200
brain		 SRR037906
brain		 GSM510444
brain		 SRR037928
embryo		 SRR345198
brain
.CAGAGAGAGACTGAGACACACA.................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ACAGTAGGACGTCCAGACGACA......................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACAAAAGGTAGACAGTAGGACG.................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CACAGGTACAAAAGGTAGACAGTAGGACGTCCAGA.............................................. 35 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGTCGTGAATCATAGGTACAAA..................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CAAGGATTAGGAAAAGAGAGTTGT........................................................................................ 24 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTTACACAGTAGGACGTCCAGACG............................................ 24 3 8 0.25 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.........GACTGAGACACACATA................................................................................................................................................................................ 16 0 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..AGAGAGAGACTGAGACACACA.................................................................................................................................................................................. 21 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................AGTAGTAGGAAGAGCGCGTTG......................................................................................... 21 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................AAGGCAGACAGTAGGAC..................................................... 17 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................CCCCGCAGCCCGTCATACTG......................................................................................................................................... 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................CACGAAAACCCCCATCCCCGCA...................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................AACGCCGCCAGCCGTCCTA............................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................ACGCGCGAACCGCCACCCCCG........................................................................................................................................................ 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................CCCGCCACCCGGCCTACG.......................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................GCCACCCGTCCAACTGC........................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTTCCCTACTTGAAAGG... 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chrX:134757581-134757781 + mmu-mir-7093 tgtc-------------------------------------------------------------------------------------------------------tctctctGACTCTGTGTGT------ATGAATGTGCTCT------TGGGGGTGGGGGCG-GTGGGCAGGATGACAGAAGGAAAACCTATCAGATAGTTTGTTCATAATCCTTCTC-TCTCAACAGCACTTAGTGT-CCATGTTTTCCATCTGTCATCCTGCAGGTCTGCTGTAGCAGGTGGCACTGCTTGAACCA-AGGGAGGAACTTTCCCCC
cavPor3 scaffold_26:2708556-2708761 - tgtg-------------------------------------------------------------------------------------------------------tgtgtgtgtgtgtgcgtgcgcgtgtatgtgtgtgt-CTCACGCTCAGGA----GGGAA-GAGGGGGAAATGACAGCAGGGAAGCCTATCAGATAGTTTGTTCGTTATCCGT--T-CCTCAGCAGCACTTAGTCCCCCATGTTTTCTATCTGTCATCCTGCAGGTCTTCTGTGGCAGGTGGCACTGTCTGAAGCG-AGGGAGCAAGTTTCCCA-
dipOrd1 scaffold_5701:44859-45055 + tgtg-------------------------------------------------------------------------------------------------------tgtgtgtgtgtatgtgtgtgt------gtttgtgCACG------TGGGGGTAGGGTGGGGAAGAAGGAATGACAGCAGAGAAACCTACCGGATACTTTGTTCATAATCCTCTTC-TCTCATCAGTACTTAGTCC-CCATATTTTCGATCTGTCATCCAGTAGGTCTTCTGTAGCAGGTGGCACCGATTGAAGC-----GAGGAAGTTTCACA-
hetGal2 Unknown --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_8422:7048-7229 + -GTG-----------------------------------------------------------------------------------------------------TGTGTGTCTG------TGTGTGT------GTGCGCGCGCG------C-----TGCGGGGA-GGGGGTCGAATGACAGTAGGAAAACCTATCAAAGAGTTTGCTC----------TCTCCTCAACAGGACTTAGTCC-CGGTGTTTTCGATCTGTCATCCTGCAGGTCGGCTGTAGCAGGTGGCACTAGTTGAAGTAAAGGGAGGAAGTTTCCCC-
oryCun2 chrX:87824364-87824552 - -gtg-------------------------------------------------------------------------------------------------------tgtgtgtgtgtgtgtgtgt---------tgtgtgtgcg------tgGG-------GGG-GGGGGTCGGATGACAGCAGGGAAACCTATCAGAGAGTTTGTTCATAATCCTCCTC-TCTCAACAGCACTTAGTCC-CTATGTTTTCGATCTGTCATCCTGCAGGTCTGCTGTAGCAGGTGGCACCGCTTGAAGCA-AGGGAGGAAGTTTCTGT-
rn5 chrX:105464205-105464404 + TGTC-------------------------------------------------------------------------------------------------------TCTCTCTGTCTCTGGGTGT------ATGAGTGTGCTCC------TGGGGGTGGGGGCG-GGGGGCAGGGTGACAGAAGGAAAACCTATCAGATAGTTTCTTCATAATCCTTCTC-TCTCAACAGCACTTAGTGC-CCTTGTTTTCCATCTGTCACCCTGCAGGTCTGCTGTAGCAGGTGGCACTGCTTGAAGCA-AGGGAGGAACTTTCCCC-
speTri2 JH393623:623419-623720 + tgtgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--tgtgtgtgtgtgtgtgtgtgt------gtgtgCGCGCG------CGGGAGGGAGGGGGAAAGGGGGAAATGACAGCAAGGAAACCTATCATGTAGTTTGCTCATAATCCTTCTC-TCTCAACAGCACTTAGTCC-CCATGTTTTCGATCTGTCATCCTGCAGGTCTGCTGTAGCAGGTGGCACCGTTTGAAGCT-AGGGAGGAAGTTTCCCA-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
tgtc-------------------------------------------------------------------------------------------------------tctctctGACTCTGTGTGT------ATGAATGTGCTCT------TGGGGGTGGGGGCG-GTGGGCAGGATGACAGAAGGAAAACCTATCAGATAGTTTGTTCATAATCCTTCTC-TCTCAACAGCACTTAGTGT-CCATGTTTTCCATCTGTCATCCTGCAGGTCTGCTGTAGCAGGTGGCACTGCTTGAACCA-AGGGAGGAACTTTCCCCCSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAG...................................................211102.001020000000010000000000000010000501001111670000000000000000000000000000000020000120000000000000010000000000000000000000000000000000000100000000000000000000000000000000140000000017182010000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAGT..................................................22190.0090000000000000000000000005000056000272100000000000003000000000000011026400076105000000000000000000000050000000000000000000010000000100000000200000000000000000000000000000000040022000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAGA..................................................22128.002800000000000000000000000000001320001000000000000000110000000000001103460000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001000000000
.........................................................................................................................................................................GGCAGGATGACAGAAGGAAA...................................................................................................................................2019.00900000000001000000000000000000000000000111020000000000000000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAGGATGACAGAAGGAAAACCT...............................................................................................................................2217.00700001000000100000000000000000000000000000000200000000000000000000001000000010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAGTA.................................................2316.00600000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAGC..................................................2215.00500000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGC.....................................................1914.00400000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000
.........................................................................................................................................................................GGCAGGATGACAGAAGGAAAAC.................................................................................................................................2214.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000010000000000000000000000000000000000000000000000010000000000
........................................................................................................................................................................GGGCAGGATGACAGAAGGAAA...................................................................................................................................2113.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000200000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCAGGATGACAGAAGGAAAAC.................................................................................................................................2112.00200000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAT...................................................2112.00200000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCA....................................................2012.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000
...........................................................................................................................................................................CAGGATGACAGAAGGAAAA..................................................................................................................................1912.00200000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GGGCAGGATGACAGAAGGAAAAC.................................................................................................................................2312.00200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCAGGATGACAGAAGGA.....................................................................................................................................1811.00100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCAGGATGACAGAAGGAA....................................................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAGGATGACAGAAGGAAAACCTT..............................................................................................................................2311.00100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCAGGATGACAGAAGGAAAACC................................................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GGGCAGGATGACAGAAGGAAAA..................................................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTCCATCTGTCATCCTGCAGA..................................................2111.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.......................................................................................................................................................................................................................................................TTTTCCATCTGTCATCCTGCAT...................................................2211.00100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAGGATGACAGAAGGAAAACC................................................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TGTTTTCCATCTGTCATCCTGC.....................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................GGCAGGATGACAGAAGGAAAAA.................................................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCATT..................................................2211.00100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAGGATGACAGAAGGAAAACCC...............................................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GTTTTCCATCTGTCATCCTGC.....................................................2111.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................GGGCAGGATGACAGAAGGAAAACT................................................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCAGGATGACAGAAGGAAAA..................................................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AGGATGACAGAAGGAAAACCTA..............................................................................................................................2211.00100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GTTTTCCATCTGTCATCCTG......................................................2011.00100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAGGATGACAGAAGGAAAAC.................................................................................................................................2011.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GCTTGAACCA-AGGGAGGAACT.......2120.50100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GCTTGAACCA-AGGGAGGAAC........2020.50100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TAGCAGGTGGCACTGCTTGAACCA-AGT...............2720.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................GGCAGGATGACAGAAGGAAAACA................................................................................................................................2320.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGGTGGCACTGCTTGAACC....................1920.50100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGCTTGAACCA-AGGGAGGAACT.......2220.50100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAGAAA................................................2460.33200000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TCTGCTGTAGCAGGTGGCA...............................1930.33100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GAACCA-AGGGAGGAACTTTCCCCC2430.33100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CA-AGGGAGGAACTTTCC...1760.33200000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTCCATCTGTCATCCTGCAGAGA................................................2440.25100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................GCTTGAACCA-AGGGA.............1550.20100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
...........................................................................................................................................................................CAGGATGACAGAAGGAG....................................................................................................................................17200.05100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
cavPor3
tgtg-------------------------------------------------------------------------------------------------------tgtgtgtgtgtgtgcgtgcgcgtgtatgtgtgtgt-CTCACGCTCAGGA----GGGAA-GAGGGGGAAATGACAGCAGGGAAGCCTATCAGATAGTTTGTTCGTTATCCGT--T-CCTCAGCAGCACTTAGTCCCCCATGTTTTCTATCTGTCATCCTGCAGGTCTTCTGTGGCAGGTGGCACTGTCTGAAGCG-AGGGAGCAAGTTTCCCA-SizeHit CountTotal NormTotal
No Reads
dipOrd1
tgtg-------------------------------------------------------------------------------------------------------tgtgtgtgtgtatgtgtgtgt------gtttgtgCACG------TGGGGGTAGGGTGGGGAAGAAGGAATGACAGCAGAGAAACCTACCGGATACTTTGTTCATAATCCTCTTC-TCTCATCAGTACTTAGTCC-CCATATTTTCGATCTGTCATCCAGTAGGTCTTCTGTAGCAGGTGGCACCGATTGAAGC-----GAGGAAGTTTCACA-SizeHit CountTotal NormTotal
No Reads
hetGal2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
-GTG-----------------------------------------------------------------------------------------------------TGTGTGTCTG------TGTGTGT------GTGCGCGCGCG------C-----TGCGGGGA-GGGGGTCGAATGACAGTAGGAAAACCTATCAAAGAGTTTGCTC----------TCTCCTCAACAGGACTTAGTCC-CGGTGTTTTCGATCTGTCATCCTGCAGGTCGGCTGTAGCAGGTGGCACTAGTTGAAGTAAAGGGAGGAAGTTTCCCC-SizeHit CountTotal NormTotal
No Reads
oryCun2
-gtg-------------------------------------------------------------------------------------------------------tgtgtgtgtgtgtgtgtgt---------tgtgtgtgcg------tgGG-------GGG-GGGGGTCGGATGACAGCAGGGAAACCTATCAGAGAGTTTGTTCATAATCCTCCTC-TCTCAACAGCACTTAGTCC-CTATGTTTTCGATCTGTCATCCTGCAGGTCTGCTGTAGCAGGTGGCACCGCTTGAAGCA-AGGGAGGAAGTTTCTGT-SizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
TGTC-------------------------------------------------------------------------------------------------------TCTCTCTGTCTCTGGGTGT------ATGAGTGTGCTCC------TGGGGGTGGGGGCG-GGGGGCAGGGTGACAGAAGGAAAACCTATCAGATAGTTTCTTCATAATCCTTCTC-TCTCAACAGCACTTAGTGC-CCTTGTTTTCCATCTGTCACCCTGCAGGTCTGCTGTAGCAGGTGGCACTGCTTGAAGCA-AGGGAGGAACTTTCCCC-SizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
tgtgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--tgtgtgtgtgtgtgtgtgtgt------gtgtgCGCGCG------CGGGAGGGAGGGGGAAAGGGGGAAATGACAGCAAGGAAACCTATCATGTAGTTTGCTCATAATCCTTCTC-TCTCAACAGCACTTAGTCC-CCATGTTTTCGATCTGTCATCCTGCAGGTCTGCTGTAGCAGGTGGCACCGTTTGAAGCT-AGGGAGGAAGTTTCCCA-SizeHit CountTotal NormTotal
No Reads

Generated: 05/01/2015 at 01:51 AM