ID:

mmu-mir-7056

 Coordinate:

chr7:47083166-47083224 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-41.1

Sense Strand Reads

GTGCCTGTGACAGCACTTACTGGCTGTGATCTCAGAGGAAATGTGGGTGCTGTGGAGGAGGACAGAGAGGTTGGGCCCAACTCACAGCCTCACCTGTCTCCCACCACAGATCCTCACAGCAGGGTACGTCTGACGTCACCAGACCCTGAAGATCCTCTG
***********************************......((((((..((((((.((.((((((.(((((((...........)))))))..)))))).)).))))))..)).)))).....************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR206940
brain		 SRR042471
spleen		 SRR042477
brain		 SRR206941
brain		 SRR042470
lymph		 SRR042468
lymph		 SRR553582
brain		 SRR553583
cerebellum		 SRR206942
brain		 SRR042473
lymph		 SRR345204
brain		 SRR032477
uterus		 SRR345205
brain		 SRR206939
brain		 SRR345202
brain		 SRR345203
brain		 SRR060845
brain		 SRR037906
brain		 SRR345207
brain		 SRR345199
brain		 SRR059771
spleen		 SRR059772
spleen		 GSM510444
brain		 SRR037905
brain		 SRR038744
brain		 SRR042465
spleen		 SRR042467
spleen		 SRR042469
lymph		 SRR042486
ovary		 SRR391852
embryo		 SRR042463
spleen		 SRR065052
jejunum		 SRR032476
uterus		 SRR037907
brain		 SRR042472
lymph		 SRR065053
jejunum		 SRR116846
epididymis		 SRR248525
testes		 SRR345198
brain		 SRR345206
brain		 SRR391845
embryo		 SRR038741
brain		 SRR345196
brain		 SRR069809
testes		 SRR039153
muscle		 SRR345200
brain
..................................................TGTGGAGGAGGACAGAGAGGTTT...................................................................................... 23 1 1 48.00 48 5 8 7 4 2 5 1 0 1 7 0 2 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTT....................................................................................... 22 0 1 39.00 39 5 0 2 8 2 0 3 1 0 1 1 1 2 1 0 2 1 3 0 0 1 1 0 0 0 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTA...................................................................................... 23 1 1 22.00 22 2 0 2 4 2 0 2 1 1 2 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTAT..................................................................................... 24 2 1 19.00 19 3 3 4 0 1 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTT....................................................................................... 20 0 1 15.00 15 0 1 0 1 0 0 0 0 0 0 2 0 0 0 6 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGT........................................................................................ 21 0 1 13.00 13 3 0 0 1 1 4 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTT....................................................................................... 23 0 1 11.00 11 1 0 1 0 1 0 0 1 1 0 0 1 0 0 0 3 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGG......................................................................................... 20 0 1 9.00 9 6 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTTT...................................................................................... 24 1 1 8.00 8 0 0 2 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGT........................................................................................ 22 0 1 7.00 7 0 1 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTTT..................................................................................... 24 2 1 7.00 7 2 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTTA...................................................................................... 21 1 1 6.00 6 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGTT....................................................................................... 21 0 1 4.00 4 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTAT...................................................................................... 23 2 2 4.00 8 4 0 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTAA...................................................................................... 23 2 1 3.00 3 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGG......................................................................................... 21 0 1 3.00 3 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CCTCACCTGTCTCCCACCACAGA................................................. 23 0 1 3.00 3 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTAA..................................................................................... 24 2 2 3.00 6 2 1 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAG.......................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTTTT..................................................................................... 25 2 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGG......................................................................................... 19 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCTGTGGAGGAGGACAGAGAGGT........................................................................................ 24 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGA........................................................................................... 18 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGTTAT..................................................................................... 23 2 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTTA...................................................................................... 24 1 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGTTA...................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTTA..................................................................................... 24 2 2 1.50 3 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTTT...................................................................................... 21 1 2 1.50 3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CCTCACCTGTCTCCCACCACAGT................................................. 23 1 2 1.50 3 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAG.......................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................GCTGTGGAGGAGGACAGAGAG.......................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGTTT...................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................AGGACAGAGAGGTTCGGC................................................................................... 18 1 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTAT...................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCTGTGGAGGAGGACAGAGAGGAA....................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................AGGACAGAGAGGTTGGGC................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGA........................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGCTT....................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTAG..................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TCACCTGTCTCCCACCACAGTT................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCTGTGGAGGAGGACAGAGAGGTAT...................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CCTCACCTGTCTCCCACCACA................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCTGTGGAGGAGGACAGAGA........................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CCTCACCTGTCTCCCACCACAG.................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTAA...................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGG........................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTTAT..................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCTGTGGAGGAGGACAGAGAGGTT....................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGCGAGGTT....................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GTGGGTGCTGTGGAGGAGGACAGAG............................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGTTAG..................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CCTCACAGCAGGGTACGTCT............................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTTG...................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTTGG..................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGCGGACAGAGAGGTT....................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGGGGTT....................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGTTGA..................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................GCTGTGGAGGAGGACAGAGAGGTT....................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGA........................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGT........................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGTAGGACAGAGAGGTTG...................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................GCTGTGGAGGAGGACAGAGAGGGTT...................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTTAG.................................................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTTAT..................................................................................... 22 2 4 0.75 3 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTTTA.................................................................................... 25 3 3 0.67 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTTAA..................................................................................... 22 2 7 0.57 4 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCTGTGGAGGAGGACAGAGAA.......................................................................................... 22 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTATT.................................................................................... 25 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGCCAGAGAGGTT....................................................................................... 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGTGGTTT...................................................................................... 23 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGAGGAAATCTGGGTGCTGT.......................................................................................................... 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGGTTTTT.................................................................................... 26 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTAAA.................................................................................... 25 3 4 0.50 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAGA......................................................................................... 21 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GTGGGTACTGTGGAGGAGGAT................................................................................................ 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CTCACCTGTCTCCCACCACAGT................................................. 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CCTCACCTGTCTCCCACCACAGAAT............................................... 25 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TCACCTGTCTCCCACCACAGA................................................. 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTA....................................................................................... 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTTTTT.................................................................................... 25 3 5 0.40 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGG......................................................................................... 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGA......................................................................................... 20 1 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACAGAGAT.......................................................................................... 20 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGCTGAA.................................................................................... 25 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGAGGAGGAGGACAGAGAGGTTT...................................................................................... 23 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTGGAGGAGGACAGAGAGGTTTAA.................................................................................... 24 3 10 0.20 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGGTAAA..................................................................................... 24 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................AGGACAGAGAGGTTTGGC................................................................................... 18 1 14 0.14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTGGAGGAGGACAGAGAGATTTT..................................................................................... 24 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTGTGGAGGAGGACATAGAG.......................................................................................... 20 1 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TGCTGTAGAGGAGGACAG.............................................................................................. 18 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................TGTGGAGTAGGACAGAGAGGTAT...................................................................................... 23 3 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGAGGAAATCTGGGTGCTG........................................................................................................... 19 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................TGGAGGAGGACAGAGAGGTAA...................................................................................... 21 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TGGAGGAGGACAGAGAGGTAT...................................................................................... 21 2 19 0.11 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................ACGTCTGCCGTCACCCGATC.............. 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................GAGCAGGACAGAGAGGTT....................................................................................... 18 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................TCCTGTGGAGGAGGACAG.............................................................................................. 18 1 19 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CACGGACACTGTCGTGAATGACCGACACTAGAGTCTCCTTTACACCCACGACACCTCCTCCTGTCTCTCCAACCCGGGTTGAGTGTCGGAGTGGACAGAGGGTGGTGTCTAGGAGTGTCGTCCCATGCAGACTGCAGTGGTCTGGGACTTCTAGGAGAC
************************************......((((((..((((((.((.((((((.(((((((...........)))))))..)))))).)).))))))..)).)))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM361407
brain		 GSM361415
brain		 GSM361430
brain		 SRR391853
embryo		 SRR345199
brain		 SRR345201
brain		 SRR345200
brain		 SRR345198
brain		 SRR391846
embryo		 SRR553586
testes
....................................................ACCTCCTCCTGTCTCTCCAATC..................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
....................................................ACCTCCTCCTGTCTCTCCAA....................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........CAGACGTGAATGACCAACACTAG................................................................................................................................ 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................TGCTGTCTAGGAGTGGCGT...................................... 19 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0
..........................................................................CGGGTAGAGTGTCGGAGT................................................................... 18 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................CGTCGTCTCAGGCAGACTGCA....................... 21 3 14 0.07 1 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................CAGTGGTCTTGGACTTC........ 17 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..........................................................................CGCGTTTAGTGTCGGAGT................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
................................................................................................TGCGGGTGGTGTCTAGCAGT........................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................CATGCAGACTGCCCTG.................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
....................................................................................GTCTGAGTGGTCAGAGGGT........................................................ 19 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr7:47083116-47083274 - mmu-mir-7056 GTGCCTGTGA---CAGCACTTACTGGCTG-TGA-TCTCAGAGGAAATGTGGGTGCTGTGGAGGAGGACAGAG----AGGTTG--------------GGCCC----AACTCAC-------------------------------AGCCTCACCTGTCTCCCACCACAGATCCTCACAGCAGGGTACGTCTGACGTCACCAGACCCTGAAGATCCTCTG
cavPor3 Unknown GA--------------------------------TCTC--AAGAAATGTAGGTACTCTAGAGTGACATAGAAGTGGGGACTGCATG------AGAGGGCCT----AGCTCCC-------------------------------AGCCTCACCTGTCTCCAACCCCAGATCCCCACAGCAGAGTGTGTCTGACCTCGCCAGACCCTGAAGACCCTCTG
dipOrd1 Unknown TA------------------------------G-TCTCAGAAGAAAT-TGGGTGCTGTCCAGTGGGCTAAAA----AGCCTGGACT------AGAAGACCC----AGCTCCC-------------------------------AGCCTCACCTGTCTCCCACCCCAGATCCTCACAGCAGAGTATGTCTGACCTCGCCAGACTCCGACGACCCTCTG
hetGal2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 Unknown AG--------------CAC--------TGCTAGGCCCC-AAAGAAAGGTGGGGACCCTGGGATGAGCCAAAG--GAAGACTGGCTGAAGAGCAGAGCACCC----AGGTCCT-------------------------------GACCTCACCTGTCTTCTACC-CAGACCCTCACAGCAGGGTGTGTCTGACCTCATCGGACCCTGAGGACCCTCTG
oryCun2 Unknown GG--------------------------------TCCCAGAAGAGGGGT-GGGGCCCTGGAGTGGGCC-------------G--------------TGCCC----AGGTCCC-------------------------------TGCCTCACCTGGCTCCCACCCCAGACCCTCACAGCAGAGTGTGTCTGAGCTCGCCAGATCCCGAGGATCCTCTG
rn5 chr1:104268489-104268628 - CATTCCGAGA---CAGCACATACT---------------GAAGAAATGTGGGTGCTGTGGAGGAGG----------AGGTTG--------------GGCCC----AGCTCAC-------------------------------ACCCTCACCTGTCTCCCACCACAGATCCTCACAGCAGGGTACGTCTGACGTCACCAGACCCTGAAGATCCTCTG
speTri2 Unknown GTGCAGGTGAAGAAAGAAC--------TGTAGA-TCGCAGAAGAAATGT-GGTGCTTTGGAGTAGACCAGGA----ATGGTG--------------GGCCCTAGCAGCACCCATGAGGGGGTTAAGTGAGCTAGAGATGGGATAGCCTCCCCTGTCCCCCA---CAGATCCTCATAGCAGAGTGTGTCTCACCTCGCCCGACCCTGATGATCCTCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
GTGCCTGTGA---CAGCACTTACTGGCTG-TGA-TCTCAGAGGAAATGTGGGTGCTGTGGAGGAGGACAGAG----AGGTTG--------------GGCCC----AACTCAC-------------------------------AGCCTCACCTGTCTCCCACCACAGATCCTCACAGCAGGGTACGTCTGACGTCACCAGACCCTGAAGATCCTCTGSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
.......................................................TGTGGAGGAGGACAGAG----AGGTTT--------------.........................................................................................................................23148.004800000000000000000000000000000007215410000000000000000000000000000000000000000000000000000000010000000000000000050207000000000100000100800000000000000000000000000000000000010000000000002
.......................................................TGTGGAGGAGGACAGAG----AGGTT........................................................................................................................................22139.003900000000000000000000000000300002115800000000212000000000000000000000201000000000000000000000000000000000000000001201000000000000000000000001100000000000000000000000000000031000000000001
.......................................................TGTGGAGGAGGACAGAG----AGGTTA--------------.........................................................................................................................23122.002200000000000000000000000000100002012410000000001000000000000000000000000000000000000000000000000000000000000000001202000000000000000001000000000000000000000000000000000000021000000000001
.......................................................TGTGGAGGAGGACAGAG----AGGTTA--------------T........................................................................................................................24119.001900000000000000000000000000000004003020000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000300000000000000000000000000100000000010000000000011
.........................................................TGGAGGAGGACAGAG----AGGTT........................................................................................................................................20115.001500000000000000000000000000010000000100001006120110000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGT.........................................................................................................................................21113.001300000000000000000000000001000000003110000000001000000000000000000000000000000000000000000000000000000000000000040100000000000000000000000000000000000000000000000000000000010000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTT........................................................................................................................................23111.001100000000000000000000000100000001101010000000300000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000001
.......................................................TGTGGAGGAGGACAGAG----AGG..........................................................................................................................................2019.00900000000000000000000000000000000016000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTTT--------------.........................................................................................................................2418.00800000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001001000000000000000000000000000000000000001000000000001
......................................................CTGTGGAGGAGGACAGAG----AGGT.........................................................................................................................................2217.00700000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000002000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTTT--------------T........................................................................................................................2417.00700000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGGTTA--------------.........................................................................................................................2116.00600000000000000000000000000000000100000000001011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................GTGGAGGAGGACAGAG----AGGTT........................................................................................................................................2114.00400000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTAT--------------.........................................................................................................................2324.00800000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000001
.......................................................TGTGGAGGAGGACAGAG----AGGTAA--------------.........................................................................................................................2313.00300000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGG..........................................................................................................................................2113.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000001
.................................................................................................................................................CCTCACCTGTCTCCCACCACAGA.................................................2313.00300000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTTA--------------A........................................................................................................................2423.00600000000000000000000000000000000002120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AG...........................................................................................................................................2012.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTTT--------------T........................................................................................................................2512.00200000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGGAGGAGGACAGAG----AGG..........................................................................................................................................1912.00200000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
....................................................TGCTGTGGAGGAGGACAGAG----AGGT.........................................................................................................................................2412.00200000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----A............................................................................................................................................1812.00200000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGGAGGAGGACAGAG----AGGTTA--------------T........................................................................................................................2312.00200000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTTA--------------.........................................................................................................................2412.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000
........................................................GTGGAGGAGGACAGAG----AGGTTA--------------.........................................................................................................................2212.00200000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTTT--------------A........................................................................................................................2421.50300000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.........................................................TGGAGGAGGACAGAG----AGGTTT--------------.........................................................................................................................2121.50300000000000000000000000000000001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.................................................................................................................................................CCTCACCTGTCTCCCACCACAGT.................................................2321.50300000000000000000000000100000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AG...........................................................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.....................................................GCTGTGGAGGAGGACAGAG----AG...........................................................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................GTGGAGGAGGACAGAG----AGGTTT--------------.........................................................................................................................2211.00100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTAT--------------.........................................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................................................TGCTGTGGAGGAGGACAGAG----AGGAA........................................................................................................................................2511.00100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AGGACAGAG----AGGTTG--------------GGC......................................................................................................................1811.00100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGA.........................................................................................................................................2111.00100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGCTGTGGAGGAGGACAGAG----AGGTAT--------------.........................................................................................................................2611.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................CCTCACCTGTCTCCCACCACA...................................................2111.00100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGCTGTGGAGGAGGACAGAG----A............................................................................................................................................2111.00100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CCTCACCTGTCTCCCACCACAG..................................................2211.00100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTAA--------------.........................................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGG.........................................................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTTA--------------T........................................................................................................................2511.00100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGCTGTGGAGGAGGACAGAG----AGGTT........................................................................................................................................2511.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................GTGGGTGCTGTGGAGGAGGACAGAG----.............................................................................................................................................2511.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CCTCACAGCAGGGTACGTCT............................2011.00100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTTG--------------.........................................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGGTTG--------------G........................................................................................................................2211.00100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGGAGGAGGACAGAG----AGGTTG--------------A........................................................................................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................................GCTGTGGAGGAGGACAGAG----AGGTT........................................................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----A............................................................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
........................................................GTGGAGGAGGACAGAG----AGGT.........................................................................................................................................2011.00100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGGTTA--------------T........................................................................................................................2240.75300000000000000000000000000000002000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTTT--------------TA.......................................................................................................................2530.67200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGGTTA--------------A........................................................................................................................2270.57400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020002000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGCTGTGGAGGAGGACAGAG----AA...........................................................................................................................................2220.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTTA--------------TT.......................................................................................................................2520.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AGGTTT--------------TT.......................................................................................................................2620.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTTA--------------AA.......................................................................................................................2540.50200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000
......................................................CTGTGGAGGAGGACAGAG----AGA..........................................................................................................................................2120.50100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CTCACCTGTCTCCCACCACAGT.................................................2220.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................CCTCACCTGTCTCCCACCACAGAAT...............................................2520.50100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TCACCTGTCTCCCACCACAGA.................................................2120.50100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGGTA........................................................................................................................................2020.50100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTTT--------------TT.......................................................................................................................2550.40200000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGG..........................................................................................................................................1830.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGA..........................................................................................................................................2060.33200000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTGTGGAGGAGGACAGAG----AT...........................................................................................................................................2030.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGGAGGAGGACAGAG----AGGTTT--------------AA.......................................................................................................................24100.20200000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................TGTGGAGGAGGACAGAG----AGGTAA--------------A........................................................................................................................2470.14100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGGTAA--------------.........................................................................................................................2190.11100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGGAGGAGGACAGAG----AGGTAT--------------.........................................................................................................................21190.11200000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
cavPor3
GA--------------------------------TCTC--AAGAAATGTAGGTACTCTAGAGTGACATAGAAGTGGGGACTGCATG------AGAGGGCCT----AGCTCCC-------------------------------AGCCTCACCTGTCTCCAACCCCAGATCCCCACAGCAGAGTGTGTCTGACCTCGCCAGACCCTGAAGACCCTCTGSizeHit CountTotal NormTotal
No Reads
dipOrd1
TA------------------------------G-TCTCAGAAGAAAT-TGGGTGCTGTCCAGTGGGCTAAAA----AGCCTGGACT------AGAAGACCC----AGCTCCC-------------------------------AGCCTCACCTGTCTCCCACCCCAGATCCTCACAGCAGAGTATGTCTGACCTCGCCAGACTCCGACGACCCTCTGSizeHit CountTotal NormTotal
No Reads
hetGal2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
AG--------------CAC--------TGCTAGGCCCC-AAAGAAAGGTGGGGACCCTGGGATGAGCCAAAG--GAAGACTGGCTGAAGAGCAGAGCACCC----AGGTCCT-------------------------------GACCTCACCTGTCTTCTACC-CAGACCCTCACAGCAGGGTGTGTCTGACCTCATCGGACCCTGAGGACCCTCTGSizeHit CountTotal NormTotal
No Reads
oryCun2
GG--------------------------------TCCCAGAAGAGGGGT-GGGGCCCTGGAGTGGGCC-------------G--------------TGCCC----AGGTCCC-------------------------------TGCCTCACCTGGCTCCCACCCCAGACCCTCACAGCAGAGTGTGTCTGAGCTCGCCAGATCCCGAGGATCCTCTGSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
CATTCCGAGA---CAGCACATACT---------------GAAGAAATGTGGGTGCTGTGGAGGAGG----------AGGTTG--------------GGCCC----AGCTCAC-------------------------------ACCCTCACCTGTCTCCCACCACAGATCCTCACAGCAGGGTACGTCTGACGTCACCAGACCCTGAAGATCCTCTGSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
GTGCAGGTGAAGAAAGAAC--------TGTAGA-TCGCAGAAGAAATGT-GGTGCTTTGGAGTAGACCAGGA----ATGGTG--------------GGCCCTAGCAGCACCCATGAGGGGGTTAAGTGAGCTAGAGATGGGATAGCCTCCCCTGTCCCCCA---CAGATCCTCATAGCAGAGTGTGTCTCACCTCGCCCGACCCTGATGATCCTCTGSizeHit CountTotal NormTotal
No Reads

Generated: 05/01/2015 at 12:29 AM