ID:

mmu-mir-6996

 Coordinate:

chr2:26470059-26470119 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-25.7 -25.4 -25.2 -25.0

Sense Strand Reads

TGGCACTGTGCTGCCTCCCCCGGGCCCCAGGTCCTAACTGATTTCTGGACTGGGCTGCACAGGACAGAGCACAGTCAGCATCATCCGACGGTGTCTCTGGTCACTCTGCAGGTGTACACTGTGAGATCAATGTTGATGACTGCCATCCCCCCCTTGACCCT
****************************************.((...........(((((.((((((((((((.(((..........))).))).))))).)).)).))))).............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR391845
embryo		 SRR391847
embryo		 SRR042459
blood		 SRR391846
embryo		 SRR042471
spleen		 SRR059766
thymus		 SRR042469
lymph		 SRR042470
lymph		 SRR059765
thymus		 SRR059769
spleen		 SRR065058
pancreas		 SRR059767
thymus		 SRR391851
embryo		 SRR391852
embryo		 SRR042464
thymus		 SRR391853
embryo		 SRR042460
blood		 SRR042463
spleen		 SRR042468
lymph		 SRR042473
lymph		 SRR345202
brain		 SRR345207
brain		 SRR345198
brain		 SRR042467
spleen		 SRR042472
lymph		 SRR065059
pancreas		 SRR391848
embryo		 SRR042465
spleen		 SRR345201
brain		 SRR391850
embryo		 SRR345203
brain		 SRR345205
brain		 SRR042462
bone marrow		 SRR042484
salivary gland		 SRR042466
spleen		 SRR206942
brain		 SRR042455
blood		 SRR042478
lung		 SRR032477
uterus		 SRR037929
embryo		 SRR039185
fibroblast		 SRR040488
liver		 SRR042461
bone marrow		 SRR248525
testes		 SRR248526
testes		 SRR553582
brain		 SRR060845
brain		 SRR391849
embryo		 SRR042487
spleen		 SRR059768
spleen		 SRR059770
spleen		 SRR065047
liver		 GSM510444
brain		 SRR032476
uterus		 SRR038744
brain		 SRR039184
fibroblast		 SRR042477
brain		 SRR042480
kidney		 SRR042483
muscle		 SRR065054
jejunum		 SRR095853
heart		 SRR248524
testes		 SRR345199
brain		 SRR553583
cerebellum		 SRR553584
heart		 SRR042486
ovary		 SRR069809
testes		 SRR345197
brain		 GSM509279
testes		 SRR014231
testes		 SRR037906
brain		 SRR037925
embryo		 SRR037928
embryo		 SRR039186
fibroblast		 SRR039610
brain		 SRR042457
bone marrow		 SRR042475
fibroblast		 SRR042479
liver		 SRR042481
pancreas		 SRR065048
liver		 SRR065052
jejunum		 SRR065053
jejunum		 SRR095855BC1
heart		 SRR095855BC7
heart		 SRR206939
brain		 SRR206940
brain		 SRR248523
testes		 SRR248527
testes		 SRR037921
embryo		 SRR039183
fibroblast		 SRR345200
brain		 SRR038741
brain		 SRR065049
liver		 SRR095855BC10
heart		 SRR073954
blood
.......................................................TGCACAGGACAGAGCACAGTC..................................................................................... 21 0 1 136.00 136 9 12 8 9 13 7 2 6 5 4 6 3 0 0 2 0 4 3 1 1 3 2 0 3 0 4 0 1 2 1 1 0 1 1 0 1 0 0 0 1 0 2 0 0 0 0 0 1 1 0 0 1 2 0 0 1 1 0 1 2 0 0 0 1 0 0 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCA.................................................................................... 22 0 1 99.00 99 13 6 10 4 9 7 2 3 8 2 2 2 0 0 3 0 2 2 1 2 1 1 0 1 2 2 1 0 0 0 0 1 0 1 1 1 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGT...................................................................................... 20 0 1 94.00 94 0 0 10 0 5 9 8 5 3 2 5 3 1 0 1 0 0 0 3 1 2 0 6 2 1 0 0 1 2 0 0 2 0 1 1 2 0 0 0 2 1 1 0 1 1 1 1 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCT.................................................................................... 22 1 2 46.50 93 4 3 18 6 10 5 1 2 0 6 3 5 0 0 0 0 7 1 0 1 1 1 0 0 1 0 0 3 0 1 2 0 1 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0
.....................................................GCTGCACAGGACAGAGCACAGTC..................................................................................... 23 0 1 30.00 30 8 5 0 6 0 2 0 0 1 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCT.................................................................................... 23 1 1 27.00 27 9 13 0 2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTC..................................................................................... 22 0 1 26.00 26 5 7 0 8 0 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCA.................................................................................... 23 0 1 26.00 26 9 5 1 5 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCAA................................................................................... 23 1 1 23.00 23 3 3 1 1 2 1 2 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTAA.................................................................................... 22 1 1 14.00 14 0 0 0 1 2 0 1 2 0 0 0 1 0 0 2 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCAT................................................................................... 23 1 1 13.00 13 1 0 2 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCTGCACAGGACAGAGCACAGT...................................................................................... 22 0 1 13.00 13 2 1 0 1 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAG....................................................................................... 19 0 1 13.00 13 0 1 4 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGT...................................................................................... 21 0 1 13.00 13 4 3 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCG.................................................................................... 22 1 1 10.00 10 1 1 0 0 0 1 0 2 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTT..................................................................................... 21 1 1 10.00 10 0 0 2 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGGTGTCTCTGGTCACTCTGCAGT................................................. 24 1 1 8.00 8 0 0 0 0 0 2 0 0 0 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCAT................................................................................... 24 1 1 8.00 8 1 3 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GTGAGATCAATGTTGATGACT.................... 21 0 1 7.00 7 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCTGCACAGGACAGAGCACAGTCT.................................................................................... 24 1 1 7.00 7 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCTGCACAGGACAGAGCACAG....................................................................................... 21 0 1 6.00 6 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGGTGTCTCTGGTCACTCTGCAG.................................................. 23 0 1 6.00 6 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCAA................................................................................... 24 1 1 5.00 5 2 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCTGCACAGGACAGAGCACAGTCA.................................................................................... 24 0 1 4.00 4 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACACTGTGAGATCAATGTT........................... 19 0 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAG....................................................................................... 20 0 1 4.00 4 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGGTGTCTCTGGTCACTCTGCAGA................................................. 24 1 1 4.00 4 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTA..................................................................................... 21 1 2 4.00 8 2 0 0 0 1 0 2 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACACTGTGAGATCAATGTTGATGACTGC.................. 28 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACACTGTGAGATCAATGTTGATGACT.................... 26 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTAA.................................................................................... 23 1 1 3.00 3 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCAAA.................................................................................. 24 2 1 3.00 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCAAT.................................................................................. 24 2 2 2.50 5 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCAC................................................................................... 23 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCATA.................................................................................. 24 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGCGCACAGTC..................................................................................... 21 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCTGCACAGGACAGAGCACAGC...................................................................................... 22 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCGA................................................................................... 24 2 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCAAAGT................................................................................ 26 3 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGGTGTCTCTGGTCACTCTGCAGTA................................................ 25 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GTGTCTCTGGTCACTCTGCAG.................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GAGATCAATGTTGATGACT.................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GACGGTGTCTCTGGTCACTCTGCAG.................................................. 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCTT................................................................................... 24 2 2 1.50 3 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCATT.................................................................................. 24 2 2 1.50 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCC.................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCAGT.................................................................................. 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACACTC..................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGCACAGAGCACAGTCA.................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGGTGTCTCTGGTCACTCTGCA................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TCGCTGCACAGGACAGAGCACAGTC..................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGTGTCTCTGGTCACTCTGCAGTTT............................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACTGGACAGAGCACAGTC..................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACATAGCACAGTCA.................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGGGCACAGTCAA................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ACTGTGAGATCAATGTTGAT........................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CACTGTGAGATCAATGTTGATGA...................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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......................................................CTGCACAGGACAGAGCACAGTAT.................................................................................... 23 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCCACAGGACAGAGCACAGTC..................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCTGA.................................................................................. 24 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGGACAGT...................................................................................... 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGAACAGAGCACAGT...................................................................................... 20 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCTAT.................................................................................. 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCAGAGGCCAGAGCACAGTCA.................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTCACAGGACAGAGCACAGTCG.................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGGGCACAGTCT.................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGTACAGT...................................................................................... 20 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGCACAGGACCGAGCACAGT...................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGCACAGGACAGAGCACAGTCT.................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCTA................................................................................... 23 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACATTCT.................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCGCAGGACAGAGCACAGTCT.................................................................................... 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGGACAGAGCACAGTCTAA.................................................................................. 25 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTGCACAGCACAGAGCACAGTCATT.................................................................................. 25 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAATAA.................................................................................... 22 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCCCAGGACAGAGCACAGTTA.................................................................................... 22 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACCGCGCACAGTC..................................................................................... 21 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACCGTCAAT.................................................................................. 24 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCAAAGGACAGAGCACAGT...................................................................................... 20 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACACT...................................................................................... 20 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAAAGCACAGTCT.................................................................................... 22 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................TCCGACGGTGTC.................................................................. 12 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGCACAGGACAGAGCACAGTCT.................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGTGTCTCTGGTCAC......................................................... 15 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AACATCCGACGGTGTCCCTGC............................................................. 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGG...................................................................................... 20 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTCTAA.................................................................................. 24 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ATCAGCCGACGATGTCTC................................................................ 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................TGCACAGGACAGTGCACTGTCAT................................................................................... 23 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CAGTCCGCGTCGTCCGACG....................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................TGCACAGGACTGAGCACAGTA..................................................................................... 21 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AACATTCGACGGTGTCTCT............................................................... 19 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................TGCGCAGGACGGAGCACAGTCT.................................................................................... 22 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGGACAGAGCACAGTAGT................................................................................... 23 3 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AACATCCGACGGTGTCGGT............................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................TGCACAGGACAGAGC........................................................................................... 15 0 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................CTGCAGCGGACAGAGCCCAGTC..................................................................................... 22 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCACAGAACAGAGCACAGC...................................................................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CACGTAGCATCATCCGACG....................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................GTCAGTCTGCAGGTGTAGA........................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACCGTGACACGACGGAGGGGGCCCGGGGTCCAGGATTGACTAAAGACCTGACCCGACGTGTCCTGTCTCGTGTCAGTCGTAGTAGGCTGCCACAGAGACCAGTGAGACGTCCACATGTGACACTCTAGTTACAACTACTGACGGTAGGGGGGGAACTGGGA
***********************************.((...........(((((.((((((((((((.(((..........))).))).))))).)).)).))))).............))**************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM361398
brain		 GSM361407
brain		 GSM361415
brain		 SRR248524
testes		 SRR345200
brain		 GSM361430
brain		 SRR345201
brain		 SRR248527
testes		 SRR345197
brain		 SRR039153
muscle		 SRR345202
brain		 SRR553584
heart		 SRR039154
muscle		 SRR037929
embryo		 SRR391846
embryo		 SRR345198
brain		 SRR039152
muscle		 SRR038741
brain		 SRR345207
brain		 SRR391845
embryo
.....................................................CGACGTGTCCTGTCTCGTGTCAGT.................................................................................... 24 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GGCTGCCACAGAGACCAGTGAGACGT................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GCCGTGTCCTGTCTCGTGTCAGA.................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ACGTGTCCTGTCTCGTGTCAGA.................................................................................... 22 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CCGCGGTCCAGGATTGGC......................................................................................................................... 18 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GTCAGTCGCAGTAGGCT......................................................................... 17 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CGTAGTATGCTGCCAC.................................................................... 16 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GTGTCAGTCGGCGTAGGCT......................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TGTCAGTCGTAGTAGGCCGT....................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................ATTGACTAAAGACACGACCCG.......................................................................................................... 21 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............GGAGGGGGCCCGGGCT.................................................................................................................................... 16 1 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
....................................................................................GGCTGCCACAAAGTCCAGT.......................................................... 19 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................TGCGACAGAGAGCAGTGAG....................................................... 19 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....TGACACGACGCAGCGGACCCGG....................................................................................................................................... 22 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............GAGGGGGCCCGGGCTCCCG................................................................................................................................ 19 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................TAACGGTAGGGGGCGAAC..... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.CCGTGACGCGACGAAGGGG............................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AGACCAGTGAGA...................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................CTAGTTACAACCAGTGACG.................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......ACACGACGGAGG............................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GTTGTAGCAGGCTGGCACA................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................GTAGGCTGCC...................................................................... 10 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GTAGTAGGCCGCCATA................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GGCTGCCACA................................................................... 10 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GAGGCGTCCCGGGGTCGAGGAT............................................................................................................................. 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....GACACGACGGAGGGG............................................................................................................................................. 15 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr2:26470009-26470169 - mmu-mir-6996 TGGCACTGTGCTGCCTCCCCCGGGCCC---------CAGGTCCTAACTGATTTCTGGACTGGGCTGCACAGGACAGAGCACAGTC-AGCATC-----ATCCGA----CGGTGTCTCTGGTCAC-----TCTGCAGGTGTACACTGTGAGATCAATGTTGATGACTGCCATCCCCCCCTTGACCCT
cavPor3 scaffold_18:39075038-39075157 - GGTCGG-------------------------------------CCAACGGCTGTGGGACTG-----CAGGGGT--GGGCACAGCC-ACACGT-----CCCTGA----TCGAG-----GGTCA------CCTGTAGGTGTGCACTGCGAGATCAATGTGGATGACTGCAGCCCGCTCCACGACCTG
dipOrd1 scaffold_12272:12287-12375 + GGT-----------------------------------------------------------------------------------------GCCAGCCTCGAACGGCC---AT---TGTC-CCCCCTCCCCAAGGCGTGCACTGTGAGATCAACGTGGATGACTGTAATCCTCTGCTCGACCCC
hetGal2 Unknown -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_1330:26045-26050 - CGTCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
oryCun2 Unknown -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
rn5 chr3:9278582-9278740 - AAGCCCTGTGCTCCCTTCCCTTGGTCC---------CAGTTCCTGATTGGTTGCTGGACTGGGCCACACAGGAC--AGTACAGCC-AGTATC-----TTCTGA----TGGTGTCTGTTGTCAC-----TCTGCAGGTGTACACTGTGAGATCAACGTCGATGACTGCCATCCTCCCCTAGACCCT
speTri2 JH393479:1322284-1322449 + CTGTCCCATCATGCCTTTCCTGAGCATCCTGGTGGTCCAGTACTGACCACCTGCTGCCTCAGGACAGACAGGCC-GGGC--AGCCCTGTGGCCCCAGCCCTGA----TC---AC---TGCA-C-----CCTGCAGGTGTGCACTGTGAGATCAATGTGGACGACTGCAGCCCCCCTCTAGACCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
TGGCACTGTGCTGCCTCCCCCGGGCCC---------CAGGTCCTAACTGATTTCTGGACTGGGCTGCACAGGACAGAGCACAGTC-AGCATC-----ATCCGA----CGGTGTCTCTGGTCAC-----TCTGCAGGTGTACACTGTGAGATCAATGTTGATGACTGCCATCCCCCCCTTGACCCTSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
................................................................TGCACAGGACAGAGCACAGTC-...................................................................................................211136.001360840000001010000000000020000000101101010002310002000000100010991201100000001010001000000000000002000200010000000126010001000000064031031310400000010000000000000000000000000001000000257300
................................................................TGCACAGGACAGAGCACAGTC-A..................................................................................................22199.00992102000000010000000000000000001000000100000010010100000000000013461000000000100000100000000000000000100000100000112322000100000002202011900200000000000000000000000000000000000000000387200
................................................................TGCACAGGACAGAGCACAGT.....................................................................................................20194.0094010000000000000000000000000000010100020062022002000000000000200000001000000010100100000000000001000010001000000038511000000000015000112510200000000000000000000000110000000010000000139320
................................................................TGCACAGGACAGAGCACAGTC-T..................................................................................................22246.50930187000000001000000000000000000001000000000012000100100000000046300100000010000001000000000000000000000010000002012110000000000030013101011610000000000000000000000000000000000000000005500
..............................................................GCTGCACAGGACAGAGCACAGTC-...................................................................................................23130.003000000000000000000000000000000001000000000000001000000000000008651000200000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000012000
...............................................................CTGCACAGGACAGAGCACAGTC-T..................................................................................................23127.0027000000000000000000000000000000000000000000000000000000000000092130000010000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTC-...................................................................................................22126.002600000000000000000000000000000000000000000000000000000000000005870000200000000000001000000000000000000000000000101000000000000000000000000100000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTC-A..................................................................................................23126.002601000000000000000000000000000000000000000000000010000000001009550000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000001000
................................................................TGCACAGGACAGAGCACAGTC-AA.................................................................................................23123.002301000000000000000000000000100000000000000000000000000000000003130000000000000000000000000000000000000000000000102111000000000000000000201000000000000000000000000000000000000100000001102
................................................................TGCACAGGACAGAGCACAGTC-AT.................................................................................................23113.001302100000000200000000000000000000000000000000000000000000000001000000000000000000000000000000000000101000000000000100000000000001000000000000000000000000000000000000000000001000000001001
..............................................................GCTGCACAGGACAGAGCACAGT.....................................................................................................22113.001300000000000000000000000000000000100000000000000010000000000002110001000000000000000000000000000000000000000000001001000000000000000100000210000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAG......................................................................................................19113.001314000000000100000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000012000000000000000000001000000000000000000000000000000000000000000000000100
...............................................................CTGCACAGGACAGAGCACAGT.....................................................................................................21113.001300000000000000000000000000000000000000000000001000000000000004030010000000000000000000000000000000000000000000002000000000000000000000100000000000000000000000000000000000000000000100000
................................................................TGCACAGGACAGAGCACAGTC-G..................................................................................................22110.001000000000000000000000000000000000000000000000000000000000000001010001200000000000000000000000000000000000000000000200000000000000000100000000000000000000000000000000000000000000000011000
................................................................TGCACAGGACAGAGCACAGTT-...................................................................................................21110.001002000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000200000000000000000000010000000000000000000000002000
...........................................................................................................CGGTGTCTCTGGTCAC-----TCTGCAGT.................................................2418.00800000000000000000000000000000000000000000000000000000000000000000001210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000002000
...............................................................CTGCACAGGACAGAGCACAGTC-AT.................................................................................................2418.00800000000000000000000000000000000000000000000000000000000000001330000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GTGAGATCAATGTTGATGACT....................2117.00700000000000000000000000000000000000000000000000000000000000000000004120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCTGCACAGGACAGAGCACAGTC-T..................................................................................................2417.00701000000000000000000000000000000000000000000000000000000000001130000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
..............................................................GCTGCACAGGACAGAGCACAG......................................................................................................2116.00600000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000100001000200000000000000000000000000000000000000000000000000
...........................................................................................................CGGTGTCTCTGGTCAC-----TCTGCAG..................................................2316.00600000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000010000000001000
...............................................................CTGCACAGGACAGAGCACAGTC-AA.................................................................................................2415.00500000000000000000000000000000000000000000000000000000000000002010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................GCTGCACAGGACAGAGCACAGTC-A..................................................................................................2414.00400000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACACTGTGAGATCAATGTT...........................1914.00400000000000000000000000000000000000000000000000000000000000000002110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAG......................................................................................................2014.00410000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................CGGTGTCTCTGGTCAC-----TCTGCAGA.................................................2414.00400000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTA-...................................................................................................2124.00800000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000002101000000000000000000100100000000000000000000000000000000000000000000000
...........................................................................................................................................ACACTGTGAGATCAATGTTGATGACTGC..................2813.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000
...........................................................................................................................................ACACTGTGAGATCAATGTTGATGACT....................2613.00300000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-AAA................................................................................................2413.00300000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................TGCACAGGACAGAGCACAGTC-AAT................................................................................................2422.50501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000100100
................................................................TGCACAGGACAGAGCACAGTC-AC.................................................................................................2312.00200000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................................................TGCACAGGACAGAGCACAGTC-ATA................................................................................................2412.00200000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCTGCACAGGACAGAGCACAGC.....................................................................................................2212.00201000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTC-GA.................................................................................................2412.00200000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...........................................................................................................CGGTGTCTCTGGTCAC-----TCTGCAGTA................................................2512.00200000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GTGTCTCTGGTCAC-----TCTGCAG..................................................2112.00200000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GAGATCAATGTTGATGACT....................1912.00200000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GA----CGGTGTCTCTGGTCAC-----TCTGCAG..................................................2512.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTC-TT.................................................................................................2421.50300000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................TGCACAGGACAGAGCACAGTC-ATT................................................................................................2421.50301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-C..................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-AGT................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................CGGTGTCTCTGGTCAC-----TCTGCA...................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................ACTGTGAGATCAATGTTGAT........................2011.00100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CACTGTGAGATCAATGTTGATGA......................2311.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-GA.................................................................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................CTGCACAGGACAGAGCACAGTA-...................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................CTGCACAGGACAGAGCACAGTC-ATT................................................................................................2511.00100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-AGAT...............................................................................................2511.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GGTGTCTCTGGTCAC-----TCTGCAGT.................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGA.....................................................................................................2121.00200000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................GGTGTCTCTGGTCAC-----TCTGCAG..................................................2211.00100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACACTGTGAGATCAATG.............................1711.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................................TGCACAGGACAGAGCACA.......................................................................................................1811.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................CTGCACAGGACAGAGCACAGTC-AAA................................................................................................2511.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................TGATGACTGCCATCCCCCCCT.......2111.00100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GGTGTCTCTGGTCAC-----TCTGCAGAA................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GGCTGCACAGGACAGAGCACAGTC-...................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................AACTGATTTCTGGACTGGGCT........................................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CACAGGACAGAGCACAGTC-A..................................................................................................2011.00100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-ACA................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................TGCACAGGACAGAGCACAGTC-AG.................................................................................................2311.00100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTT-T..................................................................................................2251.00503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................CGGTGTCTCTGGTCAC-----TCTGCAAT.................................................2411.00101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGA.....................................................................................................2031.00301000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACACTGTGAGATCAATGTTGAT........................2211.00100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................A----CGGTGTCTCTGGTCAC-----TCTGCAG..................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................CTGCACAGGACAGAGCACAGTT-G..................................................................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTC-TA.................................................................................................2420.50100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGC.....................................................................................................2020.50100000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTA-T..................................................................................................2320.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTC-TAT................................................................................................2530.33100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-TA.................................................................................................2330.33100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTGCACAGGACAGAGCACAGTC-TAA................................................................................................2540.25100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCCGA----CGGTGTC.......................................................................1260.17100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GGTGTCTCTGGTCAC-----.........................................................1570.14100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGG.....................................................................................................2080.13100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGCACAGTC-TAA................................................................................................2490.11100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................TGCACAGGACAGAGCACAGTA-GT.................................................................................................23140.07100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCACAGGACAGAGC..........................................................................................................15190.05100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
cavPor3
GGTCGG-------------------------------------CCAACGGCTGTGGGACTG-----CAGGGGT--GGGCACAGCC-ACACGT-----CCCTGA----TCGAG-----GGTCA------CCTGTAGGTGTGCACTGCGAGATCAATGTGGATGACTGCAGCCCGCTCCACGACCTGSizeHit CountTotal NormTotal
No Reads
dipOrd1
GGT-----------------------------------------------------------------------------------------GCCAGCCTCGAACGGCC---AT---TGTC-CCCCCTCCCCAAGGCGTGCACTGTGAGATCAACGTGGATGACTGTAATCCTCTGCTCGACCCCSizeHit CountTotal NormTotal
No Reads
hetGal2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
CGTCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
oryCun2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
AAGCCCTGTGCTCCCTTCCCTTGGTCC---------CAGTTCCTGATTGGTTGCTGGACTGGGCCACACAGGAC--AGTACAGCC-AGTATC-----TTCTGA----TGGTGTCTGTTGTCAC-----TCTGCAGGTGTACACTGTGAGATCAACGTCGATGACTGCCATCCTCCCCTAGACCCTSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
CTGTCCCATCATGCCTTTCCTGAGCATCCTGGTGGTCCAGTACTGACCACCTGCTGCCTCAGGACAGACAGGCC-GGGC--AGCCCTGTGGCCCCAGCCCTGA----TC---AC---TGCA-C-----CCTGCAGGTGTGCACTGTGAGATCAATGTGGACGACTGCAGCCCCCCTCTAGACCCTSizeHit CountTotal NormTotal
No Reads

Generated: 04/30/2015 at 10:45 PM