ID:

mmu-mir-6957

 Coordinate:

chr15:80646073-80646136 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-27.0 -27.0 -27.0 -27.0

Sense Strand Reads

GGTCTAAACCTTCGATTTTCTTTAAGCCCTACCACCACCACCACACAGTTACTGCCAGAAGAGAGACAGGATCTAGGGAAAGGATGAATCTGGATCTCTTGTTTTCTCTTCCAGGGTCACCGGGGCAACAGCCTGGACAGGAGGTCCCAGGGCGGCCCTCACCC
****************************************.......((....(((.((((((((((((((((((((...........)))))))))..))))).))))))............))).))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR059769
spleen		 SRR042469
lymph		 SRR042472
lymph		 SRR042466
spleen		 SRR059770
spleen		 SRR042471
spleen		 SRR042468
lymph		 SRR042465
spleen		 SRR042470
lymph		 SRR042467
spleen		 SRR059766
thymus		 SRR059765
thymus		 SRR042473
lymph		 SRR059768
spleen		 SRR065055
jejunum		 SRR042464
thymus		 SRR059767
thymus		 SRR042461
bone marrow		 SRR042483
muscle		 SRR042457
bone marrow		 SRR065054
jejunum		 SRR042484
salivary gland		 SRR042487
spleen		 SRR065053
jejunum		 SRR065056
jejunum		 SRR391848
embryo		 SRR073954
blood		 SRR391849
embryo		 SRR525238
Blood		 SRR345203
brain		 SRR345205
brain		 SRR345199
brain		 SRR345198
brain		 SRR345200
brain
.......................................................CAGAAGAGAGACAGGATCTAG........................................................................................ 21 0 1 42.00 42 13 7 4 7 3 1 0 3 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAG........................................................................................ 20 0 1 16.00 16 3 2 5 0 1 0 2 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGG....................................................................................... 21 0 1 15.00 15 5 0 0 1 3 2 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGG....................................................................................... 22 0 1 13.00 13 6 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGT....................................................................................... 22 1 3 10.33 31 10 1 2 1 2 2 1 0 1 2 2 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTA......................................................................................... 20 0 1 10.00 10 1 3 1 1 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGA...................................................................................... 22 1 1 9.00 9 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATCTAGT....................................................................................... 23 1 1 8.00 8 5 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTCCAG.................................................. 24 0 1 6.00 6 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTC..................................................... 21 0 1 6.00 6 2 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATCTAG........................................................................................ 22 0 1 5.00 5 3 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGGA...................................................................................... 23 1 1 5.00 5 0 0 0 1 0 0 0 0 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTCCAGT................................................. 25 1 1 5.00 5 3 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTCC.................................................... 22 0 1 5.00 5 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGT....................................................................................... 21 1 3 4.67 14 8 0 1 0 2 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCCAGAAGAGAGACAGGATCTAGT....................................................................................... 24 1 1 3.00 3 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGGG...................................................................................... 23 0 1 3.00 3 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGT...................................................................................... 22 1 1 3.00 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTA......................................................................................... 19 0 1 3.00 3 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTCCAT.................................................. 24 1 1 3.00 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGGT...................................................................................... 23 1 1 3.00 3 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTT...................................................... 20 0 1 3.00 3 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCT.......................................................................................... 18 0 1 3.00 3 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GAAGAGAGACAGGATCTA......................................................................................... 18 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATCTA......................................................................................... 21 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGAA..................................................................................... 23 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCT.......................................................................................... 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGTT..................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGAT..................................................................................... 23 2 2 2.00 4 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTCCATT................................................. 25 2 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAT........................................................................................ 20 1 2 1.50 3 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAT........................................................................................ 21 1 2 1.50 3 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGTT...................................................................................... 23 2 3 1.33 4 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCACAAGAGAGACAGGATCTAG........................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGCAGAGAGACAGGATCTAGG....................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGGCAGGATCTA......................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTCCAGTT................................................ 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATCTAGGT...................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTTTTCTCTTCCA................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGGTT..................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGCTTTCTCTTCCA................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCCAGAAGAGAGACAGGAT............................................................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTATGA...................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GATCTCTTGTTTTCTCTTCCAGT................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGGGAGACAGGATCTAG........................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGCTCTCTTGTTTTCTCTTCCAGT................................................. 25 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGGTT.................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATC........................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATCTAT........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTCTTGTCTTCTCTTCCAGT................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGGAT.................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGGTA..................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATCT.......................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGATCTAGG....................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GGATCTCTTGTTTTCTCTTC..................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GAAGAGAGACAGGATCTAGGGTA.................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................AGACAGGATCTAGGGAAAGGA................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................GACAGAAGAGAGACAGGATCTAG........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGAT............................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGACCTAGG....................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GAAGAGAGACAGGATCTAGT....................................................................................... 20 1 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGTA...................................................................................... 23 2 4 0.75 3 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGTA...................................................................................... 22 2 8 0.63 5 0 2 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATTTA......................................................................................... 20 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGGAC..................................................................................... 24 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGGTTT.................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ACAGGATCTAGGGAATGGAGGA............................................................................. 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATC........................................................................................... 18 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGCATCTAGGAA..................................................................................... 24 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGAATCTAGG....................................................................................... 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGATCTCTTGTTTTCTCTTCCAT.................................................. 24 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGATACAGGATCTAGGTAT.................................................................................... 25 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCAGAAGAGAGACAGGAGCTAGT....................................................................................... 23 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTAGTT...................................................................................... 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CATAAGAGAGACAGGATCTAGGA...................................................................................... 23 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACATGATCTAG........................................................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGATCTATTGTTTTATCTTCC.................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGAACTAGT....................................................................................... 22 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGTAT..................................................................................... 24 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GGAAACAGCCTCGACTGGAGGT................... 22 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................CGGGGCAACAGCTTGGA........................... 17 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................CAGAGGAGAGACAGGATCTAGT....................................................................................... 22 2 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGAGAGACAGGATCTT......................................................................................... 19 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGAAGAGAGACAGGATCTAGA....................................................................................... 22 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GCCTGAACGGGAGGTCCCTGG............. 21 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................CAGAGAGACAGGATCTAG........................................................................................ 18 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGCAACAGCCTGGACCGG....................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....AAACCTTCGATT................................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................AGGTCGGCCCTCACC. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CCAGATTTGGAAGCTAAAAGAAATTCGGGATGGTGGTGGTGGTGTGTCAATGACGGTCTTCTCTCTGTCCTAGATCCCTTTCCTACTTAGACCTAGAGAACAAAAGAGAAGGTCCCAGTGGCCCCGTTGTCGGACCTGTCCTCCAGGGTCCCGCCGGGAGTGGG
***********************************.......((....(((.((((((((((((((((((((...........)))))))))..))))).))))))............))).))**************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR039152
muscle		 SRR073954
blood		 SRR345198
brain		 SRR039153
muscle		 SRR345197
brain		 SRR391846
embryo		 SRR039154
muscle		 GSM317181
brain		 SRR391847
embryo		 SRR391852
embryo		 SRR073955
blood		 SRR345200
brain		 SRR345205
brain
.....................................................................CTAGCTCCCTTTCCTCCTTAGACT....................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........AAGCTAAAAGAAATGCGG........................................................................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......TTGGCAGCTAAAAGAAA............................................................................................................................................. 17 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................CTTTCCTCCTCAGACCTAGAGA................................................................. 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................CCTAGAGTACAAGAGAGAAGGT................................................... 22 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................CTTTCGTCCTGAGACCTAGAGA................................................................. 22 3 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0
....................................................................................................................AGTGGCCTCGCTGTCGGAC............................. 19 2 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
CCAGATGTGGAAGCTTAAA................................................................................................................................................. 19 2 15 0.13 2 0 0 0 0 0 0 0 1 0 1 0 0 0
...........................................................................................CCTAGAGTACAAGAGAGAAGG.................................................... 21 2 15 0.13 2 0 0 0 0 0 1 0 0 1 0 0 0 0
...........................................................TCTCTCTGTCCAAGATACCTT.................................................................................... 21 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................TCGAGATGGTGGTCGTGGTGT....................................................................................................................... 21 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..AGATTTGGAAGCTTAA.................................................................................................................................................. 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................TGAGACCTAGAGAACAAATG.......................................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................GCTAGGGTTCCGCCGGGAGT... 20 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr15:80646023-80646186 + mmu-mir-6957 GGTCTAAACCTTCGATTTTCTTTAAGCCCTACCACCACCACC--------------------ACACA--------------------------------GTTACTGCCAGAA--GAGAGACAGG--------ATCTAGGGAAAGGAT------GAATCTGGATCTCTTGT--TTTCTCTTCCAGGGTCACCGGGGCAACAGCCTGGACAGGAGGTCCCAGGGCGGCCCTCAC---------CC
cavPor3 scaffold_28:23829524-23829727 + GGTCCCAATCAGTGAT--TCTTTGAGCTATCCCACCCTCATCGTTTGCAAAGCTCTTGCCTACCAGGGTGG---------------TGAGCAAAATCTAGAAGCTGCCACAA--GACTGA--------GGAGATGTGTGGGGAGGACGGATCGGC-GTCATAGACTCCAT--TCTCTCTCCCAGGGTCACCGGGGCAACAGTTTGGACAGGAGGTCTCAGGGAGGCCCACAT---------CT
dipOrd1 Unknown ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
hetGal2 Unknown ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 Unknown G---------------------------------------------------------------------------------------------------------CTGGCG--GTGGGGCAGGGCGGGG--------TGGCATTGT------GAGGCCAGAGCTCCTGTCTTCTCCTTAGCAGGGTCGCAGGGGCAACAGCCTGGACCGGAGGCCCCAGGGAAGTCCCCAC---------CT
oryCun2 chrUn0036:2379355-2379421 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGT--CCTCCCTTGCAGGGTCGCCGAGCCAACAGCCTGGACTGGAGGCCCCAGGGAGGCCCCCAC---------CT
rn5 chr7:121851261-121851438 + CGTCTAAACCTTTGATTTTCTTTAGGATCTACCACCACC-----------------------ACACA--------------------------------GTGAGTGCCAGAA--GAGAGACAGGAATGGGAGAGCTAGGGAAAGGAT------GAGTCTGGATCTCCTGT--TTTCTCTCCCAGGGTCACCGGGGCAACAGCCTGGACAGGAGAACCCAGGGAGGCCCTCCCAGGGAGGTTCC
speTri2 JH393302:1761878-1762077 - AGCTGCTACCCCCCATTGTCTCAAAG--CTGCCACC------------------------CCCCACAGCTGATTCTTGAAGTTGTATGAGCACAGTCTAGAAGCTGCCAGAAAGATGGGAGAGGGCCAGGAGATCCAGGAAGAGGAT------GGATGGGTCACCTCTGT--TCTCTCTCCCAGGGTCACCGTGGCAACAGCCTGGAGCGCAGGTCCCAGGGCAGCCCACAT---------CT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
GGTCTAAACCTTCGATTTTCTTTAAGCCCTACCACCACCACC--------------------ACACA--------------------------------GTTACTGCCAGAA--GAGAGACAGG--------ATCTAGGGAAAGGAT------GAATCTGGATCTCTTGT--TTTCTCTTCCAGGGTCACCGGGGCAACAGCCTGGACAGGAGGTCCCAGGGCGGCCCTCAC---------CCSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAG.........................................................................................................21142.0042000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070400000000000000003701021330000000000000000000000000000000000000000010100
............................................................................................................AGAA--GAGAGACAGG--------ATCTAG.........................................................................................................20116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022051000000000000000000000310000000000000000000000000000000000000000010100
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGG........................................................................................................21115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000011200530000000000000000000000000000000000000000001000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGG........................................................................................................22113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000001100620000000000000000000000000000000000000000001000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGT........................................................................................................22310.3331000000100100000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000111210000000000000000122011020000000000000000000000000000000000000000012000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTA..........................................................................................................20110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013010000000000000000010201100000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGGA.......................................................................................................2219.00900000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001101000200000000000000000000000000000000000000000000000000000000000101000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATCTAGT........................................................................................................2318.00800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000100500000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTCCAG...........................................................2416.00600000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000100000000000000000000000000000000000000000000100000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTC..............................................................2116.00600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100200200000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATCTAG.........................................................................................................2215.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100300000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGGA.......................................................................................................2315.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000011000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTCCAGT..........................................................2515.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000300000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTCC.............................................................2215.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000100100000000000000000000000000000000000000000010000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGT........................................................................................................2134.671400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001820000000000000000000000000000000000000000010100
.........................................................................................................GCCAGAA--GAGAGACAGG--------ATCTAGT........................................................................................................2413.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000001000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGGG.......................................................................................................2313.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000001000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGGT.......................................................................................................2213.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTA..........................................................................................................1913.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTCCAT...........................................................2413.00300000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGGT.......................................................................................................2313.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000100000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTT...............................................................2013.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCT...........................................................................................................1813.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................GAA--GAGAGACAGG--------ATCTA..........................................................................................................1812.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATCTA..........................................................................................................2112.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCT...........................................................................................................1912.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGGTT......................................................................................................2312.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGGAT......................................................................................................2322.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000100000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTCCATT..........................................................2512.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAT.........................................................................................................2021.50300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000200000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAT.........................................................................................................2121.50300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001100000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGTT.......................................................................................................2331.33400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000010000100000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTCCAGTT.........................................................2611.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATCTAGGT.......................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATCTCTTGT--TTTCTCTTCCA............................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGGTT......................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................GCCAGAA--GAGAGACAGG--------AT.............................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................GATCTCTTGT--TTTCTCTTCCAGT..........................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGGGTT.....................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATC............................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATCTAT.........................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGGGAT.....................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATCT...........................................................................................................2011.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------ATCTAGG........................................................................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GGATCTCTTGT--TTTCTCTTC..............................................................2011.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................AGACAGG--------ATCTAGGGAAAGGA.................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CCAGAA--GAGAGACAGG--------AT.............................................................................................................1811.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................GAA--GAGAGACAGG--------ATCTAGT........................................................................................................2050.80400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGTA.......................................................................................................2340.75300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000110000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGTA.......................................................................................................2280.63500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000120000000000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGGAC......................................................................................................2420.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGGTTT.....................................................................................................2520.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATC............................................................................................................1820.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
............................................................................................................AGAA--GAGAGACAGG--------ATCTAGTT.......................................................................................................2230.33100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGTAT......................................................................................................2450.20100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................AGAA--GAGAGACAGG--------ATCTT..........................................................................................................19100.10100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................CAGAA--GAGAGACAGG--------ATCTAGA........................................................................................................22140.07100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....AAACCTTCGATT..................................................................................................................................................................................................................................12200.05100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
cavPor3
GGTCCCAATCAGTGAT--TCTTTGAGCTATCCCACCCTCATCGTTTGCAAAGCTCTTGCCTACCAGGGTGG---------------TGAGCAAAATCTAGAAGCTGCCACAA--GACTGA--------GGAGATGTGTGGGGAGGACGGATCGGC-GTCATAGACTCCAT--TCTCTCTCCCAGGGTCACCGGGGCAACAGTTTGGACAGGAGGTCTCAGGGAGGCCCACAT---------CTSizeHit CountTotal NormTotal
No Reads
dipOrd1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
hetGal2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
G---------------------------------------------------------------------------------------------------------CTGGCG--GTGGGGCAGGGCGGGG--------TGGCATTGT------GAGGCCAGAGCTCCTGTCTTCTCCTTAGCAGGGTCGCAGGGGCAACAGCCTGGACCGGAGGCCCCAGGGAAGTCCCCAC---------CTSizeHit CountTotal NormTotal
No Reads
oryCun2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGT--CCTCCCTTGCAGGGTCGCCGAGCCAACAGCCTGGACTGGAGGCCCCAGGGAGGCCCCCAC---------CTSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
CGTCTAAACCTTTGATTTTCTTTAGGATCTACCACCACC-----------------------ACACA--------------------------------GTGAGTGCCAGAA--GAGAGACAGGAATGGGAGAGCTAGGGAAAGGAT------GAGTCTGGATCTCCTGT--TTTCTCTCCCAGGGTCACCGGGGCAACAGCCTGGACAGGAGAACCCAGGGAGGCCCTCCCAGGGAGGTTCCSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
AGCTGCTACCCCCCATTGTCTCAAAG--CTGCCACC------------------------CCCCACAGCTGATTCTTGAAGTTGTATGAGCACAGTCTAGAAGCTGCCAGAAAGATGGGAGAGGGCCAGGAGATCCAGGAAGAGGAT------GGATGGGTCACCTCTGT--TCTCTCTCCCAGGGTCACCGTGGCAACAGCCTGGAGCGCAGGTCCCAGGGCAGCCCACAT---------CTSizeHit CountTotal NormTotal
No Reads

Generated: 04/30/2015 at 07:58 PM