ID:

mmu-mir-669p-1

 Coordinate:

chr2:10489116-10489202 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-34.2 -33.8 -33.6
mature
  1. chr2:10474460-10474483 +
  2. chr2:10476872-10476895 +
  3. chr2:10479330-10479353 +
  4. chr2:10481776-10481799 +
  5. chr2:10484211-10484234 +
  6. chr2:10486668-10486691 +
  7. chr2:10489130-10489153 +
  8. chr2:10491581-10491604 +
  9. chr2:10494043-10494066 +
  10. chr2:10496511-10496534 +
  11. chr2:10498926-10498949 +
  12. chr2:10501354-10501377 +
  13. chr2:10503806-10503829 +
  14. chr2:10510185-10510208 +
  15. chr2:10512222-10512245 +
star
  1. chr2:10489167-10489189 +
  2. chr2:10496548-10496570 +

Sense Strand Reads

AAATTCATACTTATCCTCATGAGAGATCAGCCTGTGATTCCTCCATGTATGTGCATGTGTGTATAGTTGTGTGTGCATGTTCATGTCTATATTTGAATATACATAACATACACACACACACGTATAAACGCAAGCACACATACACAGACACAGGAATGGCATTCGCCAATCCCTTTGAATGATAAGT
*************************************************(((((.(((((.((((((((((((((.(((((.((((.(((......))).))))))))).)))))))).)).)))).))))).))))).************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR014231
testes		 SRR059765
thymus		 SRR391847
embryo		 SRR059767
thymus		 SRR391846
embryo		 SRR039185
fibroblast		 SRR039183
fibroblast		 SRR391845
embryo		 SRR059768
spleen		 SRR039186
fibroblast		 SRR059770
spleen		 SRR039184
fibroblast		 SRR059766
thymus		 SRR069809
testes		 SRR248527
testes		 SRR391848
embryo		 SRR391852
embryo		 SRR390297
fibroblast		 SRR391849
embryo		 SRR391853
embryo		 GSM475281
testes		 SRR391851
embryo		 SRR248524
testes		 SRR391850
embryo		 SRR037929
embryo		 SRR059769
spleen		 SRR040488
liver		 SRR037925
embryo		 SRR248525
testes		 SRR069810
testes		 SRR042471
spleen		 SRR073954
blood		 SRR042470
lymph		 SRR248523
testes		 SRR037921
embryo		 SRR037928
embryo		 SRR248526
testes		 SRR042473
lymph		 GSM510444
brain		 SRR037924
embryo		 SRR069811
testes		 SRR042465
spleen		 SRR042466
spleen		 SRR037920
embryo		 SRR037927
embryo		 SRR042464
thymus		 SRR037930
embryo		 SRR037902
testes		 SRR042475
fibroblast		 SRR037923
embryo		 SRR116846
epididymis		 SRR014235
testes		 SRR037922
embryo		 SRR042487
spleen		 SRR038744
brain		 SRR037906
brain		 SRR042469
lymph		 SRR042456
bone marrow		 SRR206942
brain		 SRR042472
lymph		 SRR039610
brain		 SRR037926
embryo		 SRR032476
uterus		 SRR525238
Blood		 SRR038741
brain		 SRR095853
heart		 SRR042459
blood		 SRR032477
uterus		 SRR037901
testes		 SRR073955
blood		 SRR206941
brain		 SRR037905
brain		 SRR037919
embryo		 SRR525237
Blood		 SRR042483
muscle		 SRR553604
testes		 SRR390298
fibroblast		 SRR042462
bone marrow		 SRR553582
brain		 SRR553603
testes		 SRR042461
bone marrow		 SRR206939
brain		 SRR042468
lymph		 SRR037903
testes		 SRR042463
spleen		 SRR042484
salivary gland		 SRR206940
brain		 SRR363964
testes		 SRR042455
blood		 SRR014234
ovary		 SRR553586
testes		 SRR065058
pancreas		 GSM566419
fibroblast		 SRR014236
testes		 SRR037907
brain		 SRR553583
cerebellum		 SRR042477
brain		 SRR042460
blood		 SRR037904
brain		 SRR345203
brain		 SRR553602
testes		 SRR065059
pancreas		 SRR042467
spleen		 GSM317181
brain		 SRR037900
testes		 SRR065055
jejunum		 SRR345202
brain		 SRR095855BC1
heart		 SRR345198
brain		 SRR042486
ovary		 SRR553585
kidney		 SRR345196
brain		 SRR069834
blood		 SRR345207
brain		 SRR065052
jejunum		 GSM566420
fibroblast		 SRR065054
jejunum		 SRR553584
heart		 SRR042478
lung		 SRR042481
pancreas		 SRR042485
testes		 SRR051940
testes		 SRR077866
liver		 SRR095855BC2
heart		 SRR345205
brain		 SRR059771
spleen		 SRR345197
brain		 GSM317182
brain		 GSM509275
testes		 SRR095855BC5
heart		 GSM509279
testes		 SRR065049
liver		 SRR345201
brain		 SRR037897
ovary		 SRR060845
brain		 SRR065053
jejunum		 SRR077864
liver		 SRR077865
liver		 SRR345204
brain		 SRR345206
brain		 SRR037898
ovary		 SRR037899
ovary		 SRR042480
kidney		 SRR051939
testes		 SRR065045
liver		 SRR065056
jejunum		 SRR345199
brain		 SRR059773
spleen
................................................................AGTTGTGTGTGCATGTTCATGTCT................................................................................................... 24 0 15 1443.27 21649 4351 2325 862 1233 826 1034 978 796 531 841 616 684 526 460 440 469 218 55 433 155 322 161 306 254 284 184 175 131 185 148 59 70 32 153 123 76 69 35 66 39 73 25 17 52 60 10 46 42 16 24 20 52 31 6 34 29 5 11 31 6 23 23 11 9 17 0 18 10 17 14 18 12 13 6 6 8 0 8 5 11 5 8 1 8 7 3 8 0 1 2 6 3 1 7 5 3 1 4 4 0 5 5 0 5 6 1 0 3 0 2 0 0 3 0 2 1 0 2 0 0 0 1 1 1 1 0 0 0 1 2 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGT..................................................................................................... 22 0 15 754.40 11316 15 1355 561 1029 478 592 474 438 775 434 689 401 433 435 284 173 79 36 115 33 237 42 126 86 109 220 92 76 85 83 83 31 62 64 51 50 73 74 65 41 55 37 53 17 26 12 12 22 20 19 14 2 15 16 15 24 24 9 17 20 19 13 11 15 16 0 9 8 10 4 16 6 8 14 13 3 0 0 8 6 5 6 11 8 7 3 5 0 7 5 3 9 1 1 1 1 2 2 1 2 1 1 9 1 2 2 4 0 0 2 0 0 0 3 1 1 3 0 1 1 1 2 1 1 0 3 0 0 1 0 1 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0
................................................................AGTTGTGTGTGCATGTTCATGTC.................................................................................................... 23 0 15 588.33 8825 41 212 1110 113 1005 607 405 651 72 473 59 372 78 191 329 378 207 152 285 146 64 148 199 198 121 22 94 111 78 25 48 76 33 63 63 49 48 20 19 57 15 11 27 21 26 8 16 6 14 27 5 10 11 6 6 9 5 8 11 7 5 11 3 2 5 0 6 9 3 5 9 3 12 3 3 5 0 2 3 4 4 4 3 2 0 0 1 0 0 3 4 1 1 2 4 3 1 3 4 1 3 0 0 2 0 1 0 3 0 1 0 0 2 1 0 1 0 0 1 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATG...................................................................................................... 21 0 16 138.69 2219 0 159 318 143 265 69 40 184 149 41 120 63 38 52 49 29 14 0 18 16 36 12 13 16 13 28 6 11 20 8 20 3 10 8 4 6 32 18 12 6 4 17 13 0 4 6 0 0 0 4 6 0 2 8 7 3 7 1 2 9 3 3 2 7 1 0 2 1 1 1 4 2 1 3 4 4 0 2 5 3 0 1 2 0 2 0 2 0 2 3 3 1 1 0 0 1 0 1 0 0 2 0 0 0 0 2 0 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCA................................................................................................... 24 1 15 130.40 1956 131 191 96 84 90 125 146 59 34 119 33 78 60 20 16 80 55 77 78 52 5 57 7 47 18 9 17 34 2 3 5 2 0 1 19 5 1 3 6 8 1 0 0 9 9 1 5 4 4 2 2 0 5 2 2 1 1 1 1 2 3 4 1 1 1 0 1 1 1 0 1 1 2 1 0 0 0 1 0 0 0 0 2 1 1 0 2 0 0 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CATAACATACACACACACACGTA............................................................... 23 0 2 62.50 125 0 0 1 0 0 3 0 0 1 0 0 0 1 0 0 0 7 92 0 6 0 6 0 0 0 1 0 0 0 1 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCAT....................................................................................................... 20 0 16 52.69 843 0 98 42 95 26 10 13 27 102 7 67 17 11 23 8 1 3 0 2 1 56 1 5 1 19 27 0 0 15 11 4 1 10 2 0 8 3 16 15 1 3 2 8 3 2 1 1 5 0 1 2 0 1 1 1 4 2 1 0 4 2 0 1 7 1 0 1 1 4 0 1 1 1 1 0 1 0 0 0 1 0 0 1 2 0 1 0 0 3 1 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 0 2 0 7 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCTT.................................................................................................. 25 1 15 47.07 706 333 57 7 23 23 10 15 18 7 9 24 6 16 25 3 7 0 0 6 1 9 1 11 8 6 5 3 0 3 22 2 4 5 0 4 0 0 1 0 0 2 2 2 0 1 1 1 0 0 0 0 3 0 0 1 0 2 1 1 0 0 0 1 0 1 0 3 0 0 0 0 1 0 2 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATAACATACACACACACACGTAT.............................................................. 23 0 2 45.50 91 0 0 10 0 2 1 1 2 0 1 0 1 0 1 0 4 18 0 0 18 0 10 0 2 1 1 0 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 3 0 0 5 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ACATAACATACACACACACACGT................................................................ 23 0 2 43.50 87 0 7 0 7 0 6 1 0 3 1 5 7 1 5 3 0 9 0 0 4 1 1 0 0 2 0 2 0 2 2 1 0 4 1 0 0 2 0 0 0 1 2 1 0 0 0 0 0 0 0 3 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CATAACATACACACACACACGT................................................................ 22 0 2 43.50 87 0 7 4 0 0 10 7 0 3 0 1 6 0 3 1 0 3 0 0 2 0 3 0 0 0 0 3 0 0 2 7 0 5 1 0 1 2 3 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TAGTTGTGTGTGCATGTTCATGT..................................................................................................... 23 0 15 38.00 570 5 40 37 18 36 47 46 15 9 26 16 25 10 37 8 18 17 0 10 4 6 3 2 12 3 5 6 2 1 7 5 7 12 1 2 3 5 4 5 0 0 1 5 1 2 0 0 1 2 1 2 0 0 0 1 2 1 1 1 0 4 0 0 0 2 0 3 0 1 1 2 0 1 1 0 0 0 0 1 0 0 2 1 1 0 1 2 0 0 0 0 0 1 1 2 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................CATAACATACACACACACACGTAT.............................................................. 24 0 2 31.50 63 0 0 3 1 1 1 0 0 0 2 0 1 0 1 0 0 10 0 0 13 0 10 1 0 1 0 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATAACATACACACACACACGT................................................................ 21 0 2 23.50 47 0 5 1 1 0 5 1 0 0 0 2 4 2 0 0 0 6 0 0 2 0 1 1 1 0 1 0 0 0 1 2 0 1 0 1 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCA........................................................................................................ 19 0 16 23.13 370 0 57 34 63 19 1 8 13 36 4 20 3 8 19 1 2 0 0 3 0 8 1 1 0 1 4 0 0 1 1 7 0 5 0 0 0 1 7 2 0 0 6 2 0 0 0 0 0 0 0 0 0 0 3 0 1 2 0 0 2 0 0 1 4 0 0 0 2 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0
................................................................AGTTGTGTGTGCATGTTCATGTT.................................................................................................... 23 1 15 22.00 330 1 44 9 32 9 6 4 6 47 3 35 4 9 8 3 1 1 0 5 0 10 0 1 3 3 13 2 3 2 5 3 1 5 2 2 2 0 7 1 1 6 3 2 2 0 0 0 1 1 0 1 1 0 0 1 0 1 0 0 3 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATTTCT................................................................................................... 24 1 15 20.73 311 49 2 0 66 1 1 1 0 27 2 65 1 39 0 0 0 0 0 0 0 1 0 0 0 3 15 2 0 1 1 0 0 0 0 1 8 0 2 0 6 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTA.................................................................................................... 23 1 18 17.11 308 3 39 5 17 10 23 12 5 19 11 13 12 12 11 2 14 4 0 7 5 2 9 6 2 3 8 4 4 0 4 4 2 1 0 2 0 0 3 0 2 1 4 3 0 1 1 2 0 1 0 1 0 0 0 1 0 0 0 0 1 0 1 4 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTAT................................................................................................... 24 1 17 16.71 284 38 45 6 27 9 3 16 8 21 12 24 9 14 1 0 0 2 0 1 0 1 1 2 1 3 14 2 1 1 2 0 0 0 0 2 2 0 0 2 0 0 1 0 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGA..................................................................................................... 22 1 18 15.83 285 0 37 3 43 5 3 5 6 42 5 33 2 14 4 3 2 3 0 2 2 6 1 1 3 2 15 0 1 1 1 0 3 2 0 0 0 4 3 2 0 0 2 1 1 0 0 1 0 0 1 0 0 1 2 0 1 0 0 0 2 0 0 3 5 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATAACATACACACACACACGTA............................................................... 22 0 2 15.50 31 0 0 2 0 2 1 1 0 0 0 0 1 0 0 0 1 7 0 0 4 0 5 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCG................................................................................................... 24 1 15 13.47 202 12 16 5 5 0 14 18 5 3 17 3 8 6 0 7 12 10 0 18 6 2 2 3 14 0 0 0 0 3 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCTTT................................................................................................. 26 1 15 13.33 200 105 5 0 5 0 1 4 0 6 0 6 1 3 8 2 0 0 0 0 0 7 0 0 0 0 0 3 1 1 6 5 0 7 2 0 0 1 4 0 0 1 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTTT................................................................................................... 24 1 15 13.33 200 26 20 2 13 4 5 3 1 12 2 19 1 2 0 2 0 0 0 0 0 2 1 0 1 1 10 0 0 0 6 3 1 3 0 0 19 0 5 0 9 0 1 1 6 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 3 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................AGTTGTGTGTGCATGTTC......................................................................................................... 18 0 16 11.63 186 0 16 17 11 10 5 6 18 16 5 4 15 2 2 14 1 1 0 0 0 6 0 4 2 2 1 0 0 4 0 2 0 0 5 0 0 4 0 3 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCTA.................................................................................................. 25 0 15 11.13 167 66 11 4 8 3 11 12 9 1 10 2 7 1 5 0 1 1 0 1 0 1 0 1 2 0 0 1 0 0 2 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATTT..................................................................................................... 22 1 16 9.00 144 0 0 1 19 0 0 0 0 21 0 36 0 15 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 1 2 10 0 1 1 3 0 1 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTAA................................................................................................... 24 2 18 7.00 126 21 17 7 8 6 4 4 1 4 3 9 8 4 1 0 2 0 0 1 0 0 3 0 1 1 3 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TAGTTGTGTGTGCATGTTCATGTC.................................................................................................... 24 0 15 6.53 98 5 0 5 2 6 5 3 3 0 5 1 6 0 11 9 5 4 0 3 1 0 1 1 1 0 0 0 1 1 0 1 1 3 0 2 0 1 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ACATAACATACACACACACACG................................................................. 22 0 2 6.00 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ACATAACATACACACACAC.................................................................... 19 0 20 5.25 105 0 5 1 2 3 0 4 1 2 0 3 4 0 0 7 0 1 0 0 2 8 0 0 1 0 0 0 0 2 0 0 0 2 0 1 0 24 15 0 0 0 3 2 0 0 0 0 0 0 0 3 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCTAT................................................................................................. 26 0 15 5.00 75 46 3 0 0 0 1 5 0 3 1 1 1 0 2 0 0 0 0 2 0 1 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TAGTTGTGTGTGCATGTTCATG...................................................................................................... 22 0 16 4.94 79 0 1 8 0 4 2 1 9 2 2 1 8 1 1 2 2 2 0 1 1 1 2 0 0 0 1 1 0 0 0 3 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 3 2 0 3 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCTAA................................................................................................. 26 1 15 4.60 69 27 7 0 7 0 3 8 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 1 1 0 1 4 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTGCATGTTCATGTCAA.................................................................................................. 25 1 15 4.47 67 10 7 0 1 3 7 5 5 4 6 0 5 3 0 1 1 0 0 0 2 0 0 0 0 3 0 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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...............................................................TAGTTGTGTGTGCATGTTCATTT..................................................................................................... 23 1 16 0.38 6 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTTGTGTGTACATGTTCATG...................................................................................................... 21 1 19 0.37 7 0 0 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTAAGTATGAATAGGAGTACTCTCTAGTCGGACACTAAGGAGGTACATACACGTACACACATATCAACACACACGTACAAGTACAGATATAAACTTATATGTATTGTATGTGTGTGTGTGCATATTTGCGTTCGTGTGTATGTGTCTGTGTCCTTACCGTAAGCGGTTAGGGAAACTTACTATTCA
************************************************(((((.(((((.((((((((((((((.(((((.((((.(((......))).))))))))).)))))))).)).)))).))))).))))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM361408
brain		 GSM361398
brain		 GSM361430
brain		 GSM361407
brain		 GSM361415
brain		 GSM361395
brain		 GSM361402
brain		 GSM361394
brain		 GSM361399
brain		 SRR039152
muscle		 SRR391845
embryo		 SRR345198
brain		 SRR391851
embryo		 SRR039610
brain		 SRR345202
brain		 SRR037904
brain		 SRR037928
embryo		 SRR039153
muscle		 SRR345197
brain
................................................................TCAACACACACGTACAAGTACAGA................................................................................................... 24 0 15 10.53 158 45 39 28 7 7 8 8 8 8 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACA..................................................................................................... 22 0 15 7.27 109 39 23 17 4 4 7 7 4 4 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAG.................................................................................................... 23 0 15 2.13 32 6 10 2 2 2 4 4 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACACGTACAAGTACAGA................................................................................................... 24 1 15 1.47 22 9 6 3 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGC................................................................................................... 24 1 15 1.27 19 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTAC...................................................................................................... 21 0 16 1.00 16 3 1 4 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACACGTACAAGTACA..................................................................................................... 22 1 16 1.00 16 7 3 0 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACC..................................................................................................... 22 1 16 0.88 14 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGT................................................................................................... 24 1 15 0.80 12 1 2 1 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCACACACACGTACAAGTACAGA................................................................................................... 24 1 15 0.80 12 3 1 0 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCACACGTACAAGTACAGA................................................................................................... 24 1 15 0.73 11 2 1 0 1 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATCAACACACACGTACAAGTACA..................................................................................................... 23 0 15 0.67 10 2 2 0 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CCAACACACACGTACAAGTACAGA................................................................................................... 24 1 15 0.60 9 6 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TAAACACACACGTACAAGTACAGA................................................................................................... 24 1 17 0.59 10 6 0 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................ATCAACACACACGTACAAGTACC..................................................................................................... 23 1 16 0.50 8 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGAA.................................................................................................. 25 1 15 0.47 7 3 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TAAACACACACGTACAAGTACAG.................................................................................................... 23 1 17 0.41 7 3 0 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCACACGTACAAGTACAGC................................................................................................... 24 2 15 0.40 6 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAA.................................................................................................... 23 1 15 0.33 5 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGTA.................................................................................................. 25 2 17 0.29 5 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGAT.................................................................................................. 25 0 15 0.27 4 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCACACGTACAAGTACA..................................................................................................... 22 1 15 0.27 4 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCACGTACAAGTACAGC................................................................................................... 24 2 15 0.27 4 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCCCACGTACAAGTACA..................................................................................................... 22 2 19 0.26 5 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0
................................................................TCCACACACACGTACAAGTACAGC................................................................................................... 24 2 16 0.25 4 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGT........................................................................................................ 19 0 16 0.25 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACACGTACAAGTACAGT................................................................................................... 24 2 16 0.25 4 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTA....................................................................................................... 20 0 16 0.25 4 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCCACCCACACGTACAAGTACAGC................................................................................................... 24 3 17 0.24 4 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACT..................................................................................................... 22 1 18 0.22 4 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCACACACACGTACAAGTACA..................................................................................................... 22 1 20 0.20 4 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCACGTACAAGTACAGA................................................................................................... 24 1 15 0.20 3 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCACGTACAAGTACA..................................................................................................... 22 1 15 0.20 3 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................ATCAACACACACGTACAAGTACAGA................................................................................................... 25 0 15 0.20 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACGCACGTACAAGTACA..................................................................................................... 22 1 15 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACAAGTACAAGTACAGC................................................................................................... 24 2 15 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CTCAACCCACACGTACAAGTACAG.................................................................................................... 24 2 15 0.13 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACACGTACAAGTACAG.................................................................................................... 23 1 15 0.13 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCACGTACAAGTACAGT................................................................................................... 24 2 15 0.13 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCACGTACAAGTACAGATGA................................................................................................ 27 3 15 0.13 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACCCGTACAAGTACAGC................................................................................................... 24 2 15 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACCCACGTACAAGTACAGA................................................................................................... 24 2 15 0.13 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGAAT................................................................................................. 26 2 15 0.13 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCACACGTACAAGTACAG.................................................................................................... 23 1 15 0.13 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACCCGTACAAGTACAGAA.................................................................................................. 25 2 15 0.13 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCGCGTACAAGTACAGC................................................................................................... 24 3 15 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGATAT................................................................................................ 27 0 15 0.13 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACCCGTACAAGTACA..................................................................................................... 22 1 15 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCACACACACGTACAAGTACAGAT.................................................................................................. 25 1 15 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTT....................................................................................................... 20 1 16 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACACGTACAAGTACAGC................................................................................................... 24 2 16 0.13 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATCACCACACACGTACAAGTACA..................................................................................................... 23 1 16 0.13 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACGCGTACAAGTAC...................................................................................................... 21 1 16 0.13 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACACGTACAAGTAC...................................................................................................... 21 1 17 0.12 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACGG.................................................................................................... 23 1 17 0.12 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCCCACACACGTACAAGTACAGA................................................................................................... 24 2 17 0.12 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACATA................................................................................................... 24 1 17 0.12 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACCCGTACAAGTACA..................................................................................................... 22 2 17 0.12 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCACCCACCCGTACAAGTACAGA................................................................................................... 24 3 17 0.12 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACCCGTACAAGTACC..................................................................................................... 22 2 18 0.11 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCCCACGTACAAGTACAGC................................................................................................... 24 3 18 0.11 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTC....................................................................................................... 20 1 18 0.11 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CCAACACACACGTACAAGTACA..................................................................................................... 22 1 19 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TGAACACACACGTACAAGTACA..................................................................................................... 22 1 20 0.10 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CTCAACACACCCGTACAAGTACC..................................................................................................... 23 3 20 0.10 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ACAACACACACGTACAAGTACA..................................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCACCACACACGTACAAGTACT..................................................................................................... 22 2 20 0.10 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TAAACACACACGTACAAGTACAGT................................................................................................... 24 2 20 0.10 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GGAAACTTACTATTCA 16 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................TCAACACACACTTACAAGTACAGA................................................................................................... 24 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGATAA................................................................................................ 27 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGAAA................................................................................................. 26 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAAGTACAGG................................................................................................... 24 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCACGTACAAGTACAGAA.................................................................................................. 25 2 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAAACCACACGTACAAGTACAGA................................................................................................... 24 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCCCACGTACAAGTACAG.................................................................................................... 23 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CCACCACACACGTACAAGTACAGA................................................................................................... 24 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACCCACCCGTACAAGTACAGA................................................................................................... 24 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATCAACACACACGTACAAGTACAA.................................................................................................... 24 1 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCCACTTACAAGTACAGA................................................................................................... 24 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATCAACACACACGTACAAGTAC...................................................................................................... 22 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ACAACACACACGTACAAGTACAG.................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTTGCCGCAAGCGGTTAGAGAA............ 22 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................TCAACACATACGTACAAGTACA..................................................................................................... 22 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CCAACACACACGTACAAGTACAG.................................................................................................... 23 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACCAAGGTACAAGTACAGA................................................................................................... 24 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTGCAAGTACA..................................................................................................... 22 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAAAAAACACGTACAAGTACAGA................................................................................................... 24 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATCAACACACACGTACAAGTA....................................................................................................... 21 0 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACAGGTACA..................................................................................................... 22 1 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCACACACACGTACAAGTACAGT................................................................................................... 24 2 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CCTTGCCGTGAGCGGTTAG................ 19 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................GTGTGTGCATAATTGCGT....................................................... 18 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................TCAACACACACGTACAAGTAT...................................................................................................... 21 1 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TAACCACACACGTACAAGTACAGA................................................................................................... 24 2 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TAAACACACACGTACAAGTACAGAA.................................................................................................. 25 2 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATCAAAACACACGTACAAGTACA..................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ACACGTACACACATATCAACACA................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CCGTAAGCGGGCAGGGAAGC.......... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTTGCCGTAAGCGGGTAG................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................GTAAACACACACGTACAAGTACAGA................................................................................................... 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCAACACACACGTACACGTACATTT.................................................................................................. 25 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CCGCAAGCGGGTAGGGAA............ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AGCGGTTAGGGAACC.......... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGCCGCAAGCGGGTAGGGAA............ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................ACACGTACACACATATCAACA..................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GTGTTTATGCGTCGGTGTCCTT............................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................CCCACACACACGTACAAGTACAGA................................................................................................... 24 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CCAACACCCACGTACAAGTACA..................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ACCGTAAGCGGCCACGGAAA........... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
TATAAGGATGAATAGGAGTACC..................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr2:10489066-10489252 + mmu-mir-669p-1 AAATTCATACTTATCCTCATGAGAGATCAGCCTGTGATTCCTCCATGTATGTGCATGTgtgtatagttgtgtgtgcatgttcatgtctatatttgaatatacataacatacacacacacacgtataaacgCAAGCACACATACACAGACACAGGAATGGCATTCGCCAATCCCTTTGAATGATAAGT
cavPor3 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dipOrd1 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
hetGal2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
oryCun2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
rn5 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
speTri2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
AAATTCATACTTATCCTCATGAGAGATCAGCCTGTGATTCCTCCATGTATGTGCATGTgtgtatagttgtgtgtgcatgttcatgtctatatttgaatatacataacatacacacacacacgtataaacgCAAGCACACATACACAGACACAGGAATGGCATTCGCCAATCCCTTTGAATGATAAGTSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
................................................................AGTTGTGTGTGCATGTTCATGTCT...................................................................................................24151443.27216491184370149611058500000000006641229517342311881831000000000100135212331243913123607628446796826862469433254161218155201197868410348411655030030100200002101001750000000101015326350006201002035072517059653118461600032211435152706174280114601487315330618569440000000053205118610232552612331110
................................................................AGTTGTGTGTGCATGTTCATGT.....................................................................................................2215754.401131679203141514905010000000000651624116151921651617000000420003817511519417613265010912438478561173115864279331411474401592434203603000010000000103210920000010111111246220740001350101219107375398316775220689300237111521021022810243583556412685732840000000810016331213554331029118
................................................................AGTTGTGTGTGCATGTTCATGTC....................................................................................................2315588.338825063276523804220000000000194394565104191100000001020112216311275711111264912116651100511103782851981482071465114053726074731415200003000010000000100940000000000135337200003300101010001127048672225900064004110200362001191251563199784832900000003300345482127811339
................................................................AGTTGTGTGTGCATGTTCATG......................................................................................................2116138.692219221031731002000000000001202301730012420000000000001042461134613018426531829181612141661140636941000000001000000000020060000000000027109180004300000010021713020814928120000360000000100000528481320324900000005112234361593814321
................................................................AGTTGTGTGTGCATGTTCATGTCA...................................................................................................2415130.401956011020111001000000000006211012300021100000000000029195283449518559909680784757555220014678125119477000000000000000000001700000000110210230000000000000010005234933000500131010014100020311721160000000000000001191608411
.....................................................................................................CATAACATACACACACACACGTA...............................................................23262.50125000000000000000000000000000000000000000000000000000100000000000100067600000300920000000000000000000000000000000000100000000000000000000301100000000000000000001000000000000000000000001010
................................................................AGTTGTGTGTGCATGTTCAT.......................................................................................................201652.6984331011071100000000000000150141112000010047002210000130111002819127264212113120013171070001000000000000001000000000000000121041600001000000010028141102276700056010000045200023113251538000000000000110198119511
................................................................AGTTGTGTGTGCATGTTCATGTCTT..................................................................................................251547.07706031040021000000000000000010011000000100000000000000400000106118237768101010156109000100000000000000000030000000000012501000100000001000220207524000900333300000000025222011303000000000000010157162310
......................................................................................................ATAACATACACACACACACGTAT..............................................................23245.5091010011001000000000000000010000000000000000000000000000000001022104021018180001111500100000000000000000000000000000000001000000000000000000210100000000000000000010000000000000000000000300000
....................................................................................................ACATAACATACACACACACACGT................................................................23243.508700000000000000000000000000000010000010000000000000000000000200000001943001761000000000000000000000020000000000000400000000000000000210113050001000000000000052110223000000000000000071700
.....................................................................................................CATAACATACACACACACACGT................................................................22243.5087000001000010000000000000000011010000000000000000000000000010000400033200076100000000000000000000000030000000000000503000000000000001100723010000000000000000032110021000000000000010170010
...............................................................TAGTTGTGTGTGCATGTTCATGT.....................................................................................................231538.005700300710110000000000000051022214002221000000000000112010202330153637181012317421146254726200100000000000000010160000000000011120400000000000000015050951600061050100111000377012158000000011010000040101800
.....................................................................................................CATAACATACACACACACACGTAT..............................................................24231.506300009000000000000000000001000000000000000000000000000000000100130001010130000112000000000000000000000000000000000000400000000000000000000100000000000000000000010001000000000000000000100111
......................................................................................................ATAACATACACACACACACGT................................................................21223.504700000000100000000000000200000000000000000000000000010000000000010011620001450000000000000000000000000000000000002111000000000000000000200120000000000000000001001000000000000000000152101
................................................................AGTTGTGTGTGCATGTTCA........................................................................................................191623.133700000014100000000000000020110000000000401100000020000000000010131934230100000831400000000000000000000000000001000000252700011000011000062073364200008000000000000019100111100000001000000005786312
................................................................AGTTGTGTGTGCATGTTCATGTT....................................................................................................231522.0033000001023000000000000000100000100010000000000100000220013002306991530101104463100000000000000001000020000000000001537000000000001100320304713350001000111000100008562120300000002001000004493200
................................................................AGTTGTGTGTGCATGTTCATGTA....................................................................................................231817.1130800002010000000000000000000000100010100000000000000020024110325105147294510012122311100000100000000020000040000000000000113000000000000000430401981300020030000000000114106002000000000000000139121741
................................................................AGTTGTGTGTGCATGTTCATGA.....................................................................................................221815.8328500003050000000000000000201100000000000000000000000101101000216532231320005235000000000000000000000000000000000100223000010000000200210024215330006000000000000041001143000000000000001037144330
......................................................................................................ATAACATACACACACACACGTA...............................................................22215.503100001100100000000000000000000000000000000000000000000001000000221015740001110000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000
................................................................AGTTGTGTGTGCATGTTCATGTCG...................................................................................................241513.4720200000000000000000000000100000000000000000000000001001100101015051218142106000188141700000000000000000000000000000000000010000000000000000010000303000200121000000000000133170000000000000000166501
................................................................AGTTGTGTGTGCATGTTC.........................................................................................................181611.631860000000000000000000000030030010000000100000000000010000000021181017102010000615550000000000000000000000000000000000000000000000000000000002016140006000000000000020154441400000000100000001621101
................................................................AGTTGTGTGTGCATGTTCATGTCTA..................................................................................................251511.131670000100000000000000000000000000000000000000000000002000000101934112010000127111000000000000000000000001000000000000000100000000000000000000102000100660100000000520010000000000000000000111800
................................................................AGTTGTGTGTGCATGTTCATGTAA...................................................................................................24187.001260000000030000000000000000000000000010000000000000010101001010167211300000484310000000000000000000001000000000000000100000000000000000010439000000210000000000100000100000000120000000174811
...............................................................TAGTTGTGTGTGCATGTTCATGTC....................................................................................................24156.5398010011000001000000000001000000000000000000000000000220010000036553114101036550000000000000000000000000000000000003020000000000000000101000100000050000000000110001119000000001000000000200
....................................................................................................ACATAACATACACACACACACG.................................................................2226.001210000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000002000000000000000210100000000000000000000000100000000000000000000000001
....................................................................................................ACATAACATACACACACAC....................................................................19205.251050000000200010000000000000010210000000000000000000001100000000131001012300440000000000000000000000000000000000000120150000000000000003200020300080000000000000000002247000000000000000050200
................................................................AGTTGTGTGTGCATGTTCATGTCTAT.................................................................................................26155.0075000010000000000000000000000000000000000000000000000000000102100002000000051110000000000000000000000000000000000000010000000000000000000031100010046100000000021000000000000000000000030000
...............................................................TAGTTGTGTGTGCATGTTCATG......................................................................................................22164.947900000000200000000000000000000010000200000000001000000000000009482102210001822100000000000000000000010000000000003131000000000000000110312110001000000000000010000012000000021010000011000
................................................................AGTTGTGTGTGCATGTTCATGTCTAA.................................................................................................26154.6069000000000000000000000000000000000000000000000000000002010010000000100000081310000000000000000000000400000000000000000000000000000000000001000000027000000000021001000000000000000000170700
................................................................AGTTGTGTGTGCATGTTCATGTCAT..................................................................................................25174.1270000000000000000000000000000001000000000000000000000100000010122001102500030320000000000000000000000100000000000000000000000000000000000010300000026000000000001000000000000000000000060700
...............................................................TAGTTGTGTGTGCATGTTCATGTCT...................................................................................................25153.9359000000000000000000000000000000000000100000000000000100000001001000000000024000000000000000000000000100000000000000000000000000000000000020100000026000000000030000202000000000000001051500
................................................................AGTTGTGTGTGCATGTTCATGTCC...................................................................................................24153.805700000000000000000000000100000000000000000000000000001001000103300100010008242000000000000000000000010000000000000000000000000000000000002010001007000001000010013020000000000000000062100
.....................................................................................................CATAACATACACACACACACG.................................................................2123.50700000000000000000000000100000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000010000
....................................................................................................ACATAACATACACACACACACGTAT..............................................................2523.50700000000000000000000000000000000000000000000000000000000000000000010100001000003000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................ACATAACATACACACACACACGTA...............................................................2423.50700000000000000000000000000000000000000000000000000000000000000000000020001100000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000010000
................................................................AGTTGTGTGTGCATGT...........................................................................................................16203.4068000000110000000000000000000000000000000000000000000000000000006600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................ACATAACATACACACAC......................................................................17203.30660000200000000000000000000000000000000000001000000000000000000013031204100000000100000000000000000000000000000000000000000000000000000000000000000000000000000050203280000000000000000000000
................................................................AGTTGTGTGTGCATGTTCAA.......................................................................................................20162.7544000000100000000000000000010100000000000000000000000000101001020000000000000000000000000000000000000000000000000000000000000000000000000094400000000000000000200001000000000000000000121210
.................................................................GTTGTGTGTGCATGTTCATGTCT...................................................................................................23152.273400000000000001000000000000000000000000000000000000000100000002102970210000101010000000000000000000000000000000000000000000000000000000000000001001000000000010000000000000000000000020000
...............................................................TAGTTGTGTGTGCATGTTCAT.......................................................................................................21162.193500000000000000000000000101001000000000000000000000000001001300430000100001001000100000000000000000000000000000000000000000000000000300101040000000000000000000000000000000000000000060100
......................................................................................................ATAACATACACACACACACG.................................................................2022.00400000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGTTA...................................................................................................24161.943100000000000000000000000000000000000000000000000000000000010000310000000000010000000000000000000000000000000000000000000000000000000110003020000004000000000000000000000000000000000091400
................................................................AGTTGTGTGTGCATGTTCATT......................................................................................................21171.763000000000000000000000000000000000000000000000000000000010000000100100100000100000000000000000000000000000000000000000000000000010000200103270000000000000000020000100000000010000000012200
...................................................................TGTGTGTGCATGTTCATGTCT...................................................................................................21161.752800000000000000000000000000000000000000000000000000000000000000021000000001368000000000000000000000000000000000000000000000000000000000000010001000000001000000000001000000000000000030000
................................................................AGTTGTGTGTGCATGTTCATGTCTTA.................................................................................................26151.732600000000000000000000000000000000000000000000000000000000000000000000010003001000000000000000000000000000000000000000000000000000100000000110000007000000000011000200000000000000000042100
...................................................................................................TACATAACATACACACACACACGT................................................................2421.50300000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................TGTGTGTGCATGTTCATGTC....................................................................................................20171.472500000000000000000000000000000000000000000000000000210101001100020000000004821000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................GTGTGCATGTTCATGTCT...................................................................................................18171.472500000000000000000000000000000000000000000000000000020023000202000000000003461000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGTCTTAT................................................................................................27151.4722000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000300010011000000000000000000000000000000000021200
.................................................TGTGCATGTGTGTATAGTTGTGT...................................................................................................................23201.452900002100000000000000000100000000000000000000000000000002000001000101130000200000000000000000000000000000000000000100000000000000000000001400003001000000000000000000000000000000000040000
............................................ATGTATGTGCATGTGTGTAT...........................................................................................................................20201.4028000000000000000000000000000000000000000000000000000000100000000240000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
...............................................................TAGTTGTGTGTGCATGTTCA........................................................................................................20161.382200000000000000000000000100000010000000000000000000000000000002320000000003000000000000000000000000000000000000000110000000000000000000004200001000000000000000000000000000000000000010000
.............................................................................................................................AAACGCAAGCACACATACACAGACACAGGAATGGCATTCGCCAATCCCTTTG..........52111.3615000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000
......................................................................................................ATAACATACACACACACACGTAA..............................................................2331.33400000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................ACATAACATACACACACA.....................................................................18201.102200001000000000000000000000000000000000000000000000000000000000200002000000102200000000000000000000000000000000000200000000000000000010000140000000000000000010001002000000000000000000000
....................................................................GTGTGTGCATGTTCATGTC....................................................................................................19181.001800003000000000000000000000000000000000000000000000000000000000000020000003333000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................ACATAACATACACACACACACGTAA..............................................................2521.00200000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................AGTTGTGTGTGCATGTTCATGTCGT..................................................................................................25151.001500000000000000000000000100000000000000000000000000000000000000001100120000020000000000000000000000000000000000000000000000000000000000001010000002000000000000000200000000000000000010000
...............................................................TAGTTGTGTGTGCATGTT..........................................................................................................18180.941700000000000000000000000000000000000000000000000000000000000000000000000003524000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000
................................................................AGTTGTGTGTGCATGTTCATA......................................................................................................21180.941700000000000000000000000100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001030000000000000000030000201000000000000000000500
................................................................AGTTGTGTGTGCATGTTCATGTCAG..................................................................................................25160.941500000000000000000000000000000000000000000000000000000000000000100012310003101000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000
.................................................................GTTGTGTGTGCATGTTCATGTC....................................................................................................22150.931400000000000001000000000000000000000000000000000000000100000001212131000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGAT....................................................................................................23190.891700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007020000000000000000000000000000000000000000031400
..................................................................TTGTGTGTGCATGTTCATGTCT...................................................................................................22150.801200000000000000000000000000000000000000000000000001220000002110011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGTGCATGTGTGTATAGTTGTGTG..................................................................................................................24200.801600000000000000000000000000000011000000000000000000010001000000010000000004000000000000000000000000000000000000000000000000000000000000000000000005000000000020000000000000000000000000000
.....................................................................TGTGTGCATGTTCATGTCT...................................................................................................19170.761300000000000000000000000000000000000000000000000000000001000000010000000001441000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGTG....................................................................................................23200.751500000000000000000000000000000000000000000000000000000000000001010010000001221000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000020200
................................................................AGTTGTGTGTGCATGTTCATGTAAT..................................................................................................25200.751500000000000000000000000000000000000000000000000000010000000001000000000002102000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000060000
................................................................AGTTGTGTGTGCATGTTCATGTCTAG.................................................................................................26150.731100000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000020000000000000000000000000000000000000000000006100000000000000000000000000000000000000
.................................................................GTTGTGTGTGCATGTTCATGT.....................................................................................................21150.731100000000000001000000000100000000000000000000000000000000000001001300000000001000000000000000000000000000000000000010000000000000000000000000001000000000000000000100000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGTGA...................................................................................................24200.701400000000000000000000000000000000000000000000000000000000000000010010000001101000000000000000000000000000000000000000000000000000000000001000000001000000000000000001000000000000000032100
................................................................AGTTGTGTGTGCATGTTCATGTCTAAT................................................................................................27150.671000000000000000000000000100000000000000000000000000000001001100000000000000000000000000000000000000000000000000000000000000000000000000000010000002000000000000000000000000000000000030000
...............................................................TAGTTGTGTGTGCATGTTCATGTA....................................................................................................24170.651100001000000000000000000000000000000000000000000000000000000000000201010001101000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000020000
...............................................................TAGTTGTGTGTGCATGTTCATGTCA...................................................................................................25150.60900000000000000000000000000000000000000000000000000000000000000100000000000210000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000011000
................................................................AGTTGTGTGTGCATGTTCATGTCTGA.................................................................................................26150.60900000000000000000000000000000000000000000000000000000000000000000010000002000000000000000000000000000000000000000000000000000000000000000000000002000000000010010100000000000000000010000
.............................................................................................................................AAACGCAAGCACACATACACAGA.......................................23140.57800000000000000000000000000000000000000000000000000000000000001430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGG.....................................................................................................22160.56900000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001010000000000000000000000001000000000000000041000
................................................................AGTTGTGTGTGCATGTTCAAA......................................................................................................21200.551100000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000001000000000000000000001010000000000000000000000100000000000000000030200
...............................................................TAGTTGTGTGTGCATGTTCATGTT....................................................................................................24150.53800000000000000000000000000000000000000000000000000000000000001100000000000010000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000030000
................................................................AGTTGTGTGTGCATGTTCATGTCTATT................................................................................................27150.53800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000005000000000010000000000000000000000000000
.....................................................................................................CATAACATACACACACACACGTC...............................................................2320.50100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ATAACATACACACACACACGTATC.............................................................2420.50100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CATAACATACACACACACACGTAA..............................................................2420.50100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CATAACATACACACACACACGTT...............................................................2320.50100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAACATACACACACACACGTAT..............................................................2220.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGTTAT..................................................................................................25200.45900001000000000000000000000000000000000000000000000010000000001000000000001000000000000000000000000000000000000000000000000000000000110000100000002000000000000000000000000000000000000000
...............................................................TAGTTGTGTGTGCATGTTC.........................................................................................................19160.44700000000000000000000000000000000000002000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000002000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGTCTC..................................................................................................25150.40600000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000100000000000002000000000000000000000000000000000010000
................................................ATGTGCATGTGTGTATAGTTGTGT...................................................................................................................24200.40800000000000000000000000000001100000010000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000000000000
..........................................CCATGTATGTGCATGTGTGT.............................................................................................................................20200.40800000000000000000000000000000000000000000000000000010000000100000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000012100
................................................................AGTTGTGTGTGCATGTTCATGTCTATA................................................................................................27150.40600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000001000000000000000000000
................................................................AGTTGTGTGTGCATGTTCATGTCAGA.................................................................................................26160.38600000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GTGTGTGCATGTTCATGTCT...................................................................................................20160.38600000000000000000000000000000000000000000000000000000000000001000000000002210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
cavPor3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dipOrd1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
hetGal2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
oryCun2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 04/30/2015 at 10:21 PM