ID:

mmu-mir-465c-2

 Coordinate:

chrX:66832517-66832597 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

mature
  1. chrX:66825965-66825986 -
  2. chrX:66829212-66829233 -
  3. chrX:66832527-66832548 -
  4. chrX:66835774-66835795 -
  5. chrX:66839063-66839084 -
star
  1. chrX:66826004-66826025 -
  2. chrX:66832566-66832587 -

Sense Strand Reads

GCTAAGAAGACTGTTTATGAATGTGTGAACATTTCATTACAGGCTTTGTATGCAATGCCCTATTTAGAATGGCGCTGATCTGATGAATAAAAAAAAAATGATCAGGGCCTTTCTAAGTAGAGTAAGGCTTACCAACTTCTACGTTTAATATGACTCGTAGATGAATATTCAGAGTATCTAT
*********************************************..(((.((..(((.((((((((((.(((.((((((...................)))))).))).)))))))))).)))..)).)))....********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR248527
testes		 SRR553602
testes		 SRR248524
testes		 SRR248523
testes		 SRR248526
testes		 SRR069809
testes		 SRR553586
testes		 GSM475281
testes		 SRR248525
testes		 SRR553603
testes		 SRR553604
testes		 SRR069811
testes		 SRR069810
testes		 SRR037902
testes		 SRR037901
testes		 SRR042485
testes		 SRR116846
epididymis		 SRR014231
testes		 SRR037903
testes		 SRR039154
muscle		 SRR039152
muscle		 SRR051940
testes		 SRR037900
testes		 SRR039153
muscle		 SRR042486
ovary		 SRR042481
pancreas		 SRR051939
testes		 SRR014234
ovary		 SRR014235
testes		 SRR391851
embryo		 SRR391852
embryo		 SRR391853
embryo		 SRR014236
testes		 SRR553583
cerebellum		 SRR391848
embryo		 SRR391845
embryo		 SRR553584
heart		 SRR391847
embryo		 SRR042459
blood		 SRR391846
embryo		 SRR037924
embryo		 SRR065046
liver		 GSM509279
testes		 SRR037925
embryo		 SRR391849
embryo		 SRR391850
embryo		 GSM509275
testes		 SRR037929
embryo		 SRR553582
brain		 SRR065048
liver		 SRR042460
blood		 SRR042463
spleen		 SRR345200
brain		 SRR345204
brain		 SRR037927
embryo		 SRR095855BC7
heart		 SRR037921
embryo		 SRR038741
brain		 SRR095853
heart		 SRR039185
fibroblast		 SRR042483
muscle		 SRR042484
salivary gland		 SRR095855BC1
heart		 SRR553585
kidney		 SRR037923
embryo		 GSM510444
brain		 SRR037897
ovary		 SRR042456
bone marrow		 SRR037919
embryo		 SRR037926
embryo		 SRR060845
brain		 SRR065045
liver		 SRR065049
liver		 SRR095855BC3
heart		 SRR037928
embryo		 SRR206940
brain		 SRR032477
uterus		 SRR038744
brain		 SRR039186
fibroblast		 SRR042464
thymus		 SRR042466
spleen		 SRR065055
jejunum		 SRR077865
liver		 SRR037905
brain		 SRR037920
embryo		 SRR037930
embryo		 SRR039610
brain		 SRR065058
pancreas		 SRR095855BC2
heart		 SRR390297
fibroblast		 SRR037904
brain		 SRR042462
bone marrow		 SRR042479
liver		 SRR065047
liver		 SRR095855BC5
heart		 SRR095855BC6
heart		 SRR095855BC8
heart		 SRR345202
brain		 SRR345203
brain		 SRR345207
brain		 SRR363959
testes		 SRR206941
brain
...................................................................................................GATCAGGGCCTTTCTAAGTAGA............................................................ 22 0 5 50091.60 250458 77266 37251 39150 28971 32237 1001 10712 2667 10087 4747 2967 147 345 544 562 497 471 44 101 93 80 37 74 51 78 26 3 4 2 55 39 50 1 18 10 2 13 2 0 5 2 1 1 4 5 4 1 3 1 0 0 2 0 2 0 0 1 0 0 0 0 0 0 3 2 1 1 2 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 1 2 0 1 0 1 0 0 0 1 0 1 0 1 0 0
............................................................TATTTAGAATGGCGCTGATCTG................................................................................................... 22 0 2 29717.00 59434 16846 4190 4915 7600 4592 8212 2870 3019 2131 856 414 1022 1053 314 331 125 42 9 86 139 159 143 58 113 26 23 2 24 7 6 11 10 3 3 14 11 2 6 0 5 6 2 1 4 5 3 1 1 2 3 0 0 2 0 1 2 0 0 0 1 1 0 0 0 1 0 0 0 0 1 1 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTAGA............................................................ 23 0 5 25726.80 128634 35852 22698 21221 20554 8054 2718 4978 697 6945 1790 1096 97 184 231 259 238 101 255 39 144 75 48 32 39 51 27 21 2 14 37 23 20 15 19 8 4 6 1 0 0 2 0 1 3 0 1 1 2 4 0 0 0 0 4 1 0 1 0 0 0 0 0 0 1 0 2 3 1 1 1 0 0 0 0 2 0 0 0 0 0 0 0 0 2 2 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGA.................................................................................................. 23 0 2 16842.50 33685 10772 8819 3290 3337 2679 364 1614 246 1231 574 317 71 45 54 53 16 50 17 14 24 25 8 10 11 0 4 7 2 2 2 4 1 2 1 3 1 3 0 0 2 1 0 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGT.................................................................................................. 23 1 2 12617.00 25234 3961 423 1454 2086 1561 2480 2410 3626 999 1318 831 1275 1151 475 483 57 139 97 82 27 16 52 81 12 9 7 51 4 28 0 3 0 20 0 1 5 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTCTAAGTAG............................................................. 21 0 5 9733.00 48665 10829 13106 3852 4542 5132 585 3990 1596 1596 1399 951 52 93 315 242 51 193 0 57 6 1 2 25 5 9 4 1 1 0 2 2 3 0 9 0 0 4 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTAG............................................................. 22 0 5 8707.00 43535 9799 14341 3327 5969 2086 1503 2462 461 1686 788 584 15 15 136 158 15 62 4 28 6 5 4 28 3 7 1 0 1 0 2 2 2 0 12 0 0 8 0 3 1 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0
............................................................TATTTAGAATGGCGCTGATCT.................................................................................................... 21 0 2 6316.50 12633 961 160 287 307 278 4279 280 3426 184 79 55 876 531 219 210 146 9 4 64 30 34 67 38 27 11 23 0 13 0 0 0 1 0 0 2 0 0 4 8 0 0 5 1 0 0 1 1 1 0 0 3 0 0 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATC..................................................................................................... 20 0 2 1465.00 2930 349 65 78 111 101 735 124 849 70 40 21 82 85 68 62 25 11 0 13 3 2 8 8 0 6 4 0 1 0 0 0 0 0 0 1 1 0 0 3 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATCAGGGCCTTTCTAAGTAGA............................................................ 21 0 5 1328.00 6640 1303 2657 496 504 457 13 542 22 126 322 148 1 3 7 10 3 10 1 3 1 1 1 1 0 0 0 0 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGAT...................................................................................................... 19 0 2 1073.50 2147 96 25 23 65 39 160 92 1256 49 16 7 21 31 94 115 7 6 0 24 0 1 2 12 0 1 1 0 1 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTCTAAGTAGAA........................................................... 23 1 5 1061.60 5308 1170 537 287 465 398 17 888 370 121 488 169 13 24 43 55 92 98 10 6 8 5 1 5 2 18 7 6 1 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGGGCCTTTCTAAGTAGA............................................................ 18 0 7 723.43 5064 932 2529 323 355 222 7 192 75 134 106 74 0 1 37 48 6 5 1 8 1 1 0 4 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCTTTTCTAAGTAGA............................................................ 22 1 5 517.80 2589 325 71 1221 104 764 0 23 1 39 27 10 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTAGAA........................................................... 24 1 5 425.80 2129 431 474 160 264 89 48 249 37 74 126 46 3 9 17 17 28 6 20 4 5 3 1 1 2 4 2 4 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTCTAAGTAGT............................................................ 22 1 5 410.40 2052 504 122 167 309 251 36 201 159 59 86 50 2 11 34 32 10 5 1 5 0 1 2 3 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGAA................................................................................................. 24 1 2 371.50 743 151 127 47 96 83 80 12 9 38 11 5 12 17 3 4 1 2 29 1 5 4 1 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTCTAAGTA.............................................................. 20 0 5 348.60 1743 377 212 221 153 298 221 48 70 46 23 20 4 7 10 13 7 6 0 2 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TATCAGGGCCTTTCTAAGTAGA............................................................ 22 1 5 325.00 1625 33 1213 32 27 38 0 165 7 3 67 33 0 0 2 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGT............................................................... 20 0 5 266.20 1331 241 155 80 129 52 236 83 214 50 12 10 0 1 31 24 1 4 0 1 1 0 1 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTA.............................................................. 21 0 5 255.20 1276 195 172 146 150 76 398 26 32 31 12 10 0 1 6 10 0 3 1 1 1 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTCTAAGT............................................................... 19 0 5 246.40 1232 256 88 97 130 147 44 75 276 30 18 13 4 3 22 19 3 1 0 2 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATTAGGGCCTTTCTAAGTAGA............................................................ 22 1 5 239.40 1197 175 116 418 63 349 0 6 1 35 21 8 0 0 1 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGTA................................................................................................. 24 2 2 218.50 437 92 12 43 61 63 19 28 20 22 27 15 3 0 7 6 3 1 14 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTAGT............................................................ 23 1 5 205.00 1025 194 129 67 113 49 64 134 56 48 44 56 1 4 18 19 3 1 11 1 2 0 4 4 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCATTTCTAAGTAGA............................................................ 22 1 5 189.20 946 366 7 233 133 114 3 4 4 48 16 1 1 0 4 2 4 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TCAGGGCCTTTCTAAGTAGA............................................................ 20 0 5 188.80 944 124 502 28 34 26 1 113 1 8 56 34 1 1 5 5 1 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGTT................................................................................................. 24 1 2 188.00 376 32 5 15 18 16 15 33 67 11 18 17 41 31 9 4 1 4 34 0 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCTTTTCTAAGTAGA............................................................ 23 1 5 187.00 935 134 60 493 62 130 1 16 1 21 8 7 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTTTAAGTAGA............................................................ 22 1 5 183.80 919 119 17 413 52 255 0 15 3 26 10 3 0 1 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATCAGGGCCTTTCTAAGTAG............................................................. 20 0 5 182.60 913 92 411 33 67 35 4 149 12 19 52 21 0 1 4 3 1 6 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGGGCCTTTCTAAGTAG............................................................. 17 0 8 167.63 1341 134 889 43 80 44 5 59 0 35 28 21 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTG........................................................................................................ 17 0 2 167.00 334 96 1 39 73 47 59 2 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATA..................................................................................................... 20 1 3 155.33 466 1 7 1 4 3 262 15 122 2 2 4 4 3 13 14 4 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATCAGGGCCTTTCTAAGTAGAA........................................................... 22 1 5 152.40 762 170 245 30 90 68 2 78 4 12 38 20 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGTAA................................................................................................ 25 3 2 148.00 296 52 28 26 48 50 3 13 5 23 16 5 0 0 2 0 2 1 20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGC.................................................................................................. 23 1 2 142.50 285 73 18 14 18 25 24 24 11 12 17 12 12 9 0 5 0 2 0 3 0 1 1 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGAAA................................................................................................ 25 2 2 141.50 283 38 54 22 43 48 8 2 2 23 2 3 3 2 0 1 1 0 23 0 5 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATCAGGGCCTTTCTAAGTAGA............................................................ 22 1 5 140.20 701 2 478 5 4 0 1 125 0 1 46 34 0 0 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGG.................................................................................................. 23 1 2 135.00 270 106 70 18 22 20 5 5 3 13 0 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGACTTTCTAAGTAGA............................................................ 22 1 5 134.20 671 282 5 164 71 93 2 3 1 38 0 0 0 0 2 3 2 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGTAT................................................................................................ 25 3 2 126.00 252 45 8 26 39 36 6 15 4 11 20 6 0 0 0 0 0 1 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTT................................................................................................... 22 1 2 124.50 249 14 1 3 4 0 45 26 69 1 2 1 27 17 8 7 7 0 0 1 6 3 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTATCAGGGCCTTTCTAAGTAGA............................................................ 23 1 5 120.00 600 8 485 9 9 6 0 34 2 3 33 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTCTAAGTAGAT........................................................... 23 1 5 109.20 546 89 40 51 81 62 4 65 48 17 24 10 6 11 15 5 6 1 2 3 3 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTGAT................................................................................................. 24 0 2 107.00 214 66 23 11 32 14 0 11 5 10 6 2 5 3 5 2 0 0 14 3 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGTCCTTTCTAAGTAGA............................................................ 22 1 5 105.80 529 165 104 35 19 83 0 50 2 49 14 6 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTAGAT........................................................... 24 1 5 103.40 517 72 67 73 67 35 11 49 20 17 10 9 1 10 11 16 5 1 29 3 6 0 0 0 0 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCAGGGCCTTTCTAAGTAGC............................................................ 22 1 5 97.00 485 123 23 57 109 55 4 20 7 30 37 3 0 1 8 2 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATTAGGGCCTTTCTAAGTAGA............................................................ 23 1 5 94.60 473 58 49 202 37 95 1 6 0 11 9 2 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGA....................................................................................................... 18 0 2 88.00 176 6 0 3 4 8 76 1 23 8 1 0 4 4 12 17 3 0 0 2 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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............................................................TATTTAGAATGGCGCTAATCTG................................................................................................... 22 1 2 10.00 20 5 1 1 2 4 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCCAAGTAGA............................................................ 23 1 5 9.80 49 7 4 15 10 3 0 2 0 5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATCACGGCCTTTCTAAGTAG............................................................. 21 1 5 9.60 48 1 16 0 1 0 0 16 4 0 5 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTAGAC........................................................... 24 1 5 9.60 48 15 16 5 8 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTTATCT.................................................................................................... 21 1 2 9.50 19 0 0 0 0 0 7 3 3 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGATCAGGGCCTTTCTAAGTAA............................................................. 22 1 6 9.50 57 5 9 4 1 3 11 1 16 1 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATATGA.................................................................................................. 23 1 2 9.50 19 6 0 4 2 2 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGAATGGCGCTGATCTCA.................................................................................................. 23 1 2 9.50 19 5 1 1 2 0 1 3 2 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TATTTAGGATGGCGCTGATCTGA.................................................................................................. 23 1 2 9.50 19 9 1 2 4 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGATTCTTCTGACAAATACTTACACACTTGTAAAGTAATGTCCGAAACATACGTTACGGGATAAATCTTACCGCGACTAGACTACTTATTTTTTTTTTACTAGTCCCGGAAAGATTCATCTCATTCCGAATGGTTGAAGATGCAAATTATACTGAGCATCTACTTATAAGTCTCATAGATA
*********************************************..(((.((..(((.((((((((((.(((.((((((...................)))))).))).)))))))))).)))..)).)))....********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR391850
embryo		 SRR345197
brain		 SRR037901
testes		 SRR553586
testes		 SRR345199
brain		 SRR248527
testes		 SRR345201
brain
.............................................................................................................................CCGCATGGTTGAAGAGGCA..................................... 19 2 3 0.33 1 1 0 0 0 0 0 0
.......................................................ACGGGGTAAAGCCTACCGCGAC........................................................................................................ 22 3 5 0.20 1 0 1 0 0 0 0 0
..........................................................AGATGAATCTTACCGCGACTAG..................................................................................................... 22 2 8 0.13 1 0 0 0 1 0 0 0
...........................................................GCTCAATCTTTCCGCGACTAG..................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 1 0
..........................................................GTATGAATCTTACCGGGACTAG..................................................................................................... 22 3 13 0.08 1 0 0 1 0 0 0 0
CGATTCTTCAGACAAAAACTTTC.............................................................................................................................................................. 23 3 13 0.08 1 0 0 1 0 0 0 0
.................................................................................................................................ATGGCTGAAGATGCGGATTA................................ 20 3 15 0.07 1 0 0 0 0 0 0 1
...................................................................................................................TCCTCTCATTCCGAATGGC............................................... 19 2 18 0.06 1 0 0 0 0 1 0 0
.......................................................................CGCGACTAGACT.................................................................................................. 12 0 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chrX:66832467-66832647 - mmu-mir-465c-2 GCTAAGAAGACTGTTTA---TGAATGTGTGAACATTTCATTACAGGCTTTGTATGCAATGCCCTATTTAGAATGGCGCTGATCTGATGAATAAAAAAAAAATGATCAGGGCCTTTCTAAGTAGAGTAAGGCTTACCAACTTCTACGTTTAATATGACTCGTAGATGAATATTCAGAGTATCTAT
cavPor3 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dipOrd1 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
hetGal2 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
oryCun2 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
rn5 chrX:151292217-151292307 - rno-mir-465 GTTAAGAAGACTATTAGAATCTAATGTATGAACATTTCATCAAAGGGCTTGGATGCAGTGCCCTATTTAGAACGGTGCTGGTGTGATGAAT---------------------------------------------------------------------------------------------
speTri2 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
GCTAAGAAGACTGTTTA---TGAATGTGTGAACATTTCATTACAGGCTTTGTATGCAATGCCCTATTTAGAATGGCGCTGATCTGATGAATAAAAAAAAAATGATCAGGGCCTTTCTAAGTAGAGTAAGGCTTACCAACTTCTACGTTTAATATGACTCGTAGATGAATATTCAGAGTATCTATSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
......................................................................................................GATCAGGGCCTTTCTAAGTAGA............................................................22550091.602504580000000020010000000000010000001010200000000102001001022400031252105455395047100000001000000000010000000000001000000000000080519304010078262002000000000002667114421074562544101497337100134514728971391501008732237772660000000118133372514747296710712000000
...............................................................TATTTAGAATGGCGCTGATCTG...................................................................................................22229717.00594340000000000000000000000000000000010000000020000000000016411010115614536111042000010000000000000020000000000120310010000000159113139124000026230000000000000003019119730583313148612521438212105310227600491521314592168460000000232041908564142870000001
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGA............................................................23525726.801286340000000010000000000000020200000000000000000004000121002311221401801372320101000000000000002001000000000001001000000000000753914402030051270000000000000006971125514150322592313923821482718184972055421221694580543585200000004196122698179010964978000000
...............................................................TATTTAGAATGGCGCTGATCTGA..................................................................................................23216842.503368500000000000000000000000000000000000000000000000000000011000101203212415000001000000000000000000000000000000000000000025112402000004000000000000000246111722010535414167836445713337329012312679107720000000113088195743171614000000
...............................................................TATTTAGAATGGCGCTGATCTGT..................................................................................................23212617.00252340000000000000000000000000000000000000000000000000000000001000511100030139000000000000200100000000000000010000000000000161227040000970001000000000003626009728200814834758257515224801151127520861454999156139610000000002042313188312410000000
......................................................................................................GATCAGGGCCTTTCTAAGTAG.............................................................2159733.00486650000000010000000000000000000201000100000000000000000000000000000000223193000000000000000000001000000000000110000000000156010000940000000000000001596110000252423155751125859352454238521596513210829000000009401310613999513990000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAG.............................................................2258707.004353503000000000000000000000010001000000000000000100000010010001100100002226200000000000000000001000000000010000000000000053601000071000000000000000461114000281581362815041503151559693327168620869799000000001280143417885842462000000
...............................................................TATTTAGAATGGCGCTGATCT....................................................................................................2126316.50126330830000000000000000000000000110000000000000000000101000000010004201001900000000020000000000000001000005000000000000034273001300001123000000000000000342611400038210219641460674279531876307287184278961000000000001607955280100000
...............................................................TATTTAGAATGGCGCTGATC.....................................................................................................2021465.00293003000000000000000000000000000000000000000000000000000000000001001000001100000000000000000000000000000000000000000000020311000064000001000000000849110000862681325087358582111787010134900000000000654021124000000
.......................................................................................................ATCAGGGCCTTTCTAAGTAGA............................................................2151328.00664000000000000000000000000000000000000000000000000000000000000000000001101000000000000000010000000000000000000000000000010100000000000000000000000220110001107330113315044961264571303000000003102657322148542000000
...............................................................TATTTAGAATGGCGCTGAT......................................................................................................1921073.5021470100000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000010001000011000000000000000125600020012115942470216031216523493996000000000002516792000000
......................................................................................................GATCAGGGCCTTTCTAAGTAGAA...........................................................2351061.60530800000000000000000000000000000000000000000000000000000000000000110000119800000000000000000000000000000000000000000000052801000018700000000000000037000100005554369261172413465287121398117000000000000537488169888000000
..........................................................................................................AGGGCCTTTCTAAGTAGA............................................................187723.43506400000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000121000000010000000000000007500100044837860071035532313422293200000000000252910674192000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGAA...........................................................245425.80212900000000000000000000000000000000000000000000000000000000000000000001216000000000000000000000000000000000000000000000325000000420000000000000003700201001171742841489326416074894310000000000047412646249000000
......................................................................................................GATCAGGGCCTTTCTAAGTAGT............................................................225410.402052000000000000000000000000000000000000000000000000000000000000000000010050000000000000000000000000000000000000000000001000100000000000000000000015900100033234510023611230916759251504000000000001228650201000000
...............................................................TATTTAGAATGGCGCTGATCTGAA.................................................................................................242371.507430000000000000000000000000000000000000000000000000000000000000000000100200000100000000000000000000000000000000000000042500000010000000000000000900290000431101801712964738831510000000000012711512000000
......................................................................................................GATCAGGGCCTTTCTAAGTA..............................................................205348.601743010000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000003000000000000000070000000113102700221741532214629837700000000000212232048000000
.....................................................................................................TGATCAGGGCCTTTCTAAGT...............................................................205266.20133100000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000001000000000000000000000002140100003243111012361012980505224100000000100155121083000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTA..............................................................215255.2012760000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000100000011000000000000000320110002106100039810150146317619500000000000172121026000000
......................................................................................................GATCAGGGCCTTTCTAAGT...............................................................195246.4012320000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000010000000000000000276000000219222300443413097301472560000000000088181375000000
...............................................................TATTTAGAATGGCGCTGATCTGTA.................................................................................................242218.5043700000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000002000140001670300190361432263920000000000012271528000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGT............................................................235205.00102500000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000002000000010000000000000005600110004191813146441113674849194000000000001294456134000000
........................................................................................................TCAGGGCCTTTCTAAGTAGA............................................................205188.809440000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000100000000000000000000000100000015501001113428826124000000000005025634113000000
.......................................................................................................ATCAGGGCCTTTCTAAGTAG.............................................................205182.6091300000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000001000000000000000000000001201000013401004106733193592000000000004115221149000000
..........................................................................................................AGGGCCTTTCTAAGTAG.............................................................178167.6313410000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000005208043354413400000000000889282159000000
...............................................................TATTTAGAATGGCGCTG........................................................................................................172167.0033400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059007339174796000000000001002000000
...............................................................TATTTAGAATGGCGCTGATA.....................................................................................................203155.33466000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012200000011413440026234412310000000000072415000000
.......................................................................................................ATCAGGGCCTTTCTAAGTAGAA...........................................................225152.407620000000000000000000000000000000000000000000000000000001100000000000000100000000000000000000000000000000000000000000000000000000000000000000000400000001000002019030126817000000000000245382078000000
...............................................................TATTTAGAATGGCGCTGATCTGTAA................................................................................................252148.0029600000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000005002000000212013004826235052000000000002816513000000
...............................................................TATTTAGAATGGCGCTGATCTGC..................................................................................................232142.5028500000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000100000000000000000000000001100020015030112491218141225730000000000018171224000000
...............................................................TATTTAGAATGGCGCTGATCTGAAA................................................................................................252141.50283000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000150000001000000000000000020023000010011082343222348380000000000054232000000
...............................................................TATTTAGAATGGCGCTGATCTGG..................................................................................................232135.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000030011000011100501221813201060000000000070015000000
...............................................................TATTTAGAATGGCGCTGATCTGTAT................................................................................................252126.002520000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000400350000000000600392611364500000000000820615000000
...............................................................TATTTAGAATGGCGCTGATCTT...................................................................................................222124.5024900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346000000000000000000000006900000027817014517274310140000000000012126000000
......................................................................................................GATCAGGGCCTTTCTAAGTAGAT...........................................................235109.2054600000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000013000000020000000000000004800200005153600411681511762890000000000040241065000000
...............................................................TATTTAGAATGGCGCTGATCTGAT.................................................................................................242107.002140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000500141000253000035321110146600000000000236211000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGAT...........................................................245103.405170000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000600000030000000000000000200029100016113510111016773173572000000000006710949000000
......................................................................................................GATCAGGGCCTTTCTAAGTAGC............................................................22597.00485000000000000000000000000000000000000000000000000000000010000000000001030000000000000000000000000000000000000000000001000000000000000000000000070000000280000410109573055123000000000002337320000000
...............................................................TATTTAGAATGGCGCTGA.......................................................................................................18288.00176000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000023000000317122300764443886000000000000101000000
...............................................................TATTTAGAATGGCGC..........................................................................................................15483.2533300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088311453137000000000005221000000
......................................................................................................GATCAGGGCCTTTCTAAGTAGAAA..........................................................24578.603930000000000000000000000000000000000000000000000000000000000000000000000150000000000000000000000000000000000000000000000020000000300000000000000054003000187322015203105220150000000000020761979000000
...............................................................TATTTAGAATGGCGCTGATCTGAAT................................................................................................25271.501430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100501000000000001914524290000000000034037000000
................................................................ATTTAGAATGGCGCTGATCTG...................................................................................................21270.501410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100100001441000406010710250000000000023205000000
........................................................................................................TCAGGGCCTTTCTAAGTAGAA...........................................................21564.20321000000000000000000000000000000000000000000000000000000000000020000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000001000105393800000000000187151039000000
................................................................ATTTAGAATGGCGCTGATCTGA..................................................................................................22263.0012600000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022111834230000000000058238000000
................................................................ATTTAGAATGGCGCTGATCTGT..................................................................................................22254.501090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000001171710001737112705000000000000225000000
.........................................................................................................CAGGGCCTTTCTAAGTAGA............................................................19547.4023700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000040000000020137141100000000000047835000000
...............................................................TATTTAGAATGGCGCTGATCTGAC.................................................................................................24244.508900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000085214300000000000028010000000
.........................................................................................................CAGGGCCTTTCTAAGTAG.............................................................18642.502550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000004865288000000000000510035000000
...............................................................TATTTAGAATGGCGCTGATCTA...................................................................................................22238.50770000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000150000000010100282324434000000000003402000000
........................................................................................................TCAGGGCCTTTCTAAGTAG.............................................................19538.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000165234400000000000738236000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGAAA..........................................................25536.6018300000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000215000000200000000000000006004000101023011140723611000100000004017726000000
.....................................................................................................TGATCAGGGCCTTTCTAAG................................................................19535.201760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000170000000530001170121201281200000001000374313000000
...............................................................TATTTAGAATGGCGCTGATCTC...................................................................................................22235.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000005000000010000020331032212000000000000204000000
...............................................................TATTTAGAATGGCGCTGATCTGAAC................................................................................................25233.0066000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251160000000000051000000000
.......................................................................................................ATCAGGGCCTTTCTAAGTAGAT...........................................................22530.6015300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000001000000001000010320144172300000000000362623000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGC............................................................23530.2015100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000002000000011110040032212610280000000000011417000000
...........................................................................................................GGGCCTTTCTAAGTAGA............................................................17830.1324100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040131201120000000000047116000000
..............................................................CTATTTAGAATGGCGCTGATCTG...................................................................................................23228.505700000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000006000000010000015121032110000000000003010000000
................................................................ATTTAGAATGGCGCTGATCT....................................................................................................20226.50530000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000150100000250100203002000000000000000102000000
......................................................................................................GATCAGGGCCTTTCTAAG................................................................18524.601230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000240000000000100601720230900000000000102010000000
...............................................................TATTTAGAATGGCGCTGATCTTT..................................................................................................23324.33730000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000010200000000000000000000000700100002000005914102010000000000002021000000
......................................................................................................GATCAGGGCCTTTCTAAGTAA.............................................................21621.50129000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000083000000078220012005046000000000003104000000
......................................................................................................GATCAGGGCCTTTCTAAGTAGG............................................................22519.8099000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000210000101817313340000000000021212000000
..............................................................CTATTTAGAATGGCGCTGATCTGT..................................................................................................24219.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000020000022022006000000000002125000000
..................................................................................................AAATGATCAGGGCCTTTCTAAGTAGA............................................................26218.0036000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030000000000000511117000000000007000000000
........................................................................................................TCAGGGCCTTTCTAAGTAGAAA..........................................................22618.001080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000101001009003900000000000601147000000
......................................................................AATGGCGCTGATCTG...................................................................................................15317.33520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001350225000000000000007000000
...............................................................TATTTAGAATGGCGCTGATT.....................................................................................................20316.3349000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026000000043000040100010000000000001324000000
.................................................................TTTAGAATGGCGCTGATCTGT..................................................................................................21215.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000107100000011200000000000001102000000
.................................................................TTTAGAATGGCGCTGATCTG...................................................................................................20215.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000015100050014002000000000007020000000
.................................................................TTTAGAATGGCGCTGATCTGA..................................................................................................21214.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000012220000000000014204000000
..................................................................TTAGAATGGCGCTGATCTG...................................................................................................19214.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000041200010011015000000000001000000000
..........................................................................................................AGGGCCTTTCTAAGTAGAA...........................................................19813.5010800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000010300000013514600000000000418913000000
..................................................................TTAGAATGGCGCTGATCTGT..................................................................................................20213.502700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000071100000003111000000000000211000000
...............................................................TATTTAGAATGGCGCTGATCA....................................................................................................21212.5025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000014000000001210000210010000000000000200000000
......................................................................................................GATCAGGGCCTTTCTAAGTAGAC...........................................................23512.206100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000015714150000000000010205000000
.......................................................................................................ATCAGGGCCTTTCTAAGTAGAAA..........................................................23512.00600000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000010000000000000000200000000001000001120260000000000016719000000
...............................................................TATTTAGAATGGCGCTGATCTGAGA................................................................................................25212.0024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000100000000011030000000000013001000000
...............................................................TATTTAGAATGGCGCTGATCTCT..................................................................................................23212.002400000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000005000000010000022232103000000000000100000000
...............................................................TATTTAGAATGGCGCTGATCTGAG.................................................................................................24211.502300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000040032236000000000002000000000
..............................................................CTATTTAGAATGGCGCTGATCT....................................................................................................22211.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000012000060020000000000000000000000000
...............................................................TATTTAGAATGGCGCTGATCTGATGA...............................................................................................26211.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010041100000000000101210000000000001000000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGG............................................................23511.0055000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000100982124000000000004202000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAGAC...........................................................2459.60480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008511150000000000016001000000
.....................................................................................................TGATCAGGGCCTTTCTAAGTAA.............................................................2269.50570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000160000000020000110014135000000000009401000000
cavPor3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dipOrd1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
hetGal2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
oryCun2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
GTTAAGAAGACTATTAGAATCTAATGTATGAACATTTCATCAAAGGGCTTGGATGCAGTGCCCTATTTAGAACGGTGCTGGTGTGATGAAT---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
...............................................................TATTTAGAACGGTGCTGGTGTGA..................................................................................................231179.00179000
...............................................................TATTTAGAACGGTGCTGGTGTGAT.................................................................................................24158.0058000
...............................................................TATTTAGAACGGTGCTGGTGTGAA.................................................................................................24122.0022000
................................................................ATTTAGAACGGTGCTGGTGTGA..................................................................................................22113.0013000
...............................................................TATTTAGAACGGTGCTGGTGTGT..................................................................................................2317.007000
...............................................................TATTTAGAACGGTGCTGGTGTGATGA...............................................................................................2615.005000
...............................................................TATTTAGAACGGTGCTGGTGTG...................................................................................................2214.004000
...............................................................TATTTAGAACGGTGCTGGTGTGATT................................................................................................2513.003000
...............................................................TATTTAGAACGGTGCTGGTGTGATTT...............................................................................................2612.002000
...............................................................TATTTAGAACGGTGCTGGTGTGATG................................................................................................2512.002000
...............................................................TATTTAGAACGGTGCTGGTGTGAAA................................................................................................2512.002000
................................................................ATTTAGAACGGTGCTGGTGTGT..................................................................................................2211.001000
........................................................................CGGTGCTGGTGTGAT.................................................................................................1511.001000
...............................................................TATTTAGAACGGTGCTGGTGTGACT................................................................................................2511.001000
................................................................ATTTAGAACGGTGCTGGTGTGAAA................................................................................................2411.001000
...............................................................TATTTAGAACGGTGCTGGTGTGAAAG...............................................................................................2611.001000
...............................................................TATTTAGAACGGTGCTGGTGTGAAT................................................................................................2511.001000
...............................................................TATTTAGAACGGTGCTGGTGTGTAT................................................................................................2530.331000
speTri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/01/2015 at 02:19 AM