ID:

mmu-mir-411

 Coordinate:

chr12:109710175-109710256 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-28.4

Sense Strand Reads

CAGAGGGCTTCCTGGACGTGCCCTCAGCCTTTGTCCTCGGCGTCTCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCCCCTGGAGAAGATGCTGTCTTCGGGGAGACGCCA
**************************************************(((((((..(((...((((.((((((...(((((((.((.......)))))))))...)))))).))))...))))))))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR390298
fibroblast		 SRR390297
fibroblast		 SRR391845
embryo		 SRR553582
brain		 SRR391847
embryo		 SRR391846
embryo		 SRR039184
fibroblast		 SRR039186
fibroblast		 SRR038744
brain		 SRR1509750
spermatogonia		 SRR039185
fibroblast		 SRR039183
fibroblast		 SRR206940
brain		 SRR206942
brain		 SRR039610
brain		 SRR391852
embryo		 SRR345202
brain		 SRR038741
brain		 SRR345198
brain		 SRR040488
liver		 SRR206941
brain		 SRR206939
brain		 SRR391853
embryo		 SRR391851
embryo		 GSM510444
brain		 SRR345196
brain		 SRR391848
embryo		 SRR345199
brain		 SRR553602
sertoli_cells		 SRR248526
Thy1-_somatic_testes_cells		 SRR037921
embryo		 SRR345205
brain		 SRR345201
brain		 SRR345207
brain		 SRR037920
embryo		 SRR345197
brain		 SRR345204
brain		 SRR1509751
foetal_primordial_germ_cells		 SRR391849
embryo		 SRR345206
brain		 SRR042471
spleen		 SRR037906
brain		 SRR391850
embryo		 SRR345200
brain		 SRR553583
cerebellum		 SRR345203
brain		 SRR095853
heart		 SRR037905
brain		 SRR248525
Thy1-_somatic_testes_cells		 SRR553584
heart		 SRR037922
embryo		 SRR042477
brain		 SRR248524
Thy1+_spermatogonia		 SRR1509749
zygote		 SRR042475
fibroblast		 SRR042483
muscle		 SRR077866
liver		 SRR037907
brain		 SRR037919
embryo		 SRR037925
embryo		 SRR069809
Type_A_spermatogonia		 SRR1509747
oocyte		 SRR060845
brain		 SRR248523
Thy1+_spermatogonia		 SRR037924
embryo		 SRR037904
brain		 GSM475281
testes		 SRR014234
ovary		 SRR042484
salivary gland		 SRR037929
embryo		 SRR032477
uterus		 SRR042462
bone marrow		 SRR032476
uterus		 SRR037928
embryo		 SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		 SRR1509748
spermatozoa		 SRR553586
testes		 SRR042486
ovary		 SRR116846
epididymis		 SRR037923
embryo		 SRR248527
spermatogonia		 SRR095855BC7
heart		 SRR553585
kidney		 SRR042481
pancreas		 SRR039153
muscle		 SRR069810
pachytene_spermatocytes		 SRR553603
spermatids		 SRR037926
embryo		 SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		 SRR553604
spermatocytes		 SRR037927
embryo		 SRR039152
muscle		 SRR065058
pancreas		 SRR039154
muscle		 SRR065059
pancreas		 SRR073954
blood		 SRR042482
skin		 SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		 SRR037898
ovary		 SRR069811
round_spermatid		 SRR037897
ovary		 SRR065050
liver		 SRR073955
blood		 SRR037930
embryo		 SRR095855BC2
heart		 SRR095855BC5
heart		 SRR095855BC1
heart		 SRR065046
liver		 SRR037902
testes		 SRR051940
testes		 SRR042463
spleen		 SRR095855BC8
heart		 SRR077864
liver		 SRR037901
testes		 SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		 SRR1647954
Dicer_cKO_pachytene_spermatocytes		 SRR065047
liver		 SRR065045
liver		 SRR095855BC6
heart		 GSM317181
brain		 SRR077865
liver		 SRR065048
liver		 SRR042478
lung		 SRR065056
jejunum		 SRR095855BC3
heart		 SRR037903
testes		 SRR065049
liver		 SRR042473
lymph		 SRR525237
Blood		 SRR037899
ovary		 SRR095855BC10
heart		 SRR014231
testes		 SRR065052
jejunum		 SRR042480
kidney		 SRR037900
testes		 SRR059768
spleen		 SRR042485
testes		 SRR095855BC9
heart		 SRR065055
jejunum		 GSM509275
testes		 GSM509279
testes		 SRR065054
jejunum		 GSM317182
brain		 SRR042476
heart		 SRR042479
liver		 SRR095855BC4
heart		 GSM566419
fibroblast		 SRR059770
spleen		 SRR042487
spleen		 GSM566420
fibroblast		 SRR042456
bone marrow		 SRR042459
blood		 SRR1647952
Dgcr8_cKO_pachytene_spermatocytes		 SRR042465
spleen		 SRR065053
jejunum		 SRR1647951
Dgcr8_WT_pachytene_spermatocytes		 SRR1647953
Dicer_WT_pachytene_spermatocytes		 SRR042455
blood		 SRR042470
lymph		 SRR042472
lymph		 SRR042461
bone marrow		 SRR042466
spleen		 SRR042469
lymph		 SRR059767
thymus		 SRR059769
spleen		 SRR525238
Blood		 SRR037896
ovary		 SRR042457
bone marrow		 SRR042467
spleen		 SRR059766
thymus
.................................................................TAGTAGACCGTATAGCGTACG................................................................................................ 21 0 1 370811.00 370811 132520 61609 11557 5526 7093 9595 21480 19936 5230 12 16306 16590 2886 3793 3986 1075 679 2880 95 7884 2155 1729 1238 755 1805 62 2821 194 4637 4397 2676 316 643 293 1873 423 312 0 615 174 207 788 1195 17 355 347 0 462 1314 293 711 151 859 0 106 29 504 154 357 320 390 0 254 431 230 148 262 324 17 189 61 124 50 122 231 0 165 23 85 80 108 39 38 24 29 48 81 61 107 70 57 14 41 18 45 33 5 77 54 29 41 26 22 28 21 27 21 23 30 12 31 47 35 26 46 49 15 7 6 6 12 4 2 7 2 7 7 0 1 7 2 3 8 2 6 7 1 4 3 1 1 0 1 0 0 1 1 3 0 1 2 0 3 0 1 2 3 0 0 0 0 0 0 1 2 0 0 1 0 0
....................................................................................................TATGTAACACGGTCCACTAAC............................................................. 21 0 1 231403.00 231403 103187 57086 4601 1287 4692 4097 472 119 2193 0 183 217 1720 1462 1162 11360 58 1145 37 329 1048 1029 7148 7396 3008 0 2899 15 520 197 2159 11 9 20 1901 8 16 0 2199 41 71 1126 1154 9 263 0 0 899 74 70 557 22 49 0 69 7 120 246 265 234 14 0 2 36 193 172 15 5 1 123 37 19 11 114 3 0 1 5 13 60 9 1 3 1 1 0 1 34 1 1 33 0 2 0 3 36 0 1 11 1 14 4 38 16 2 4 6 1 9 3 1 4 6 20 0 1 0 1 4 18 2 0 0 1 0 7 0 0 0 2 0 0 0 1 1 0 0 1 0 1 1 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................ATAGTAGACCGTATAGCGTACG................................................................................................ 22 0 1 137025.00 137025 39629 26028 3793 4499 2948 3476 6111 6890 2377 0 6624 5834 1710 1687 1816 267 405 1423 51 2352 1081 1297 346 208 1680 58 510 17 1640 1572 778 451 615 310 388 458 311 0 130 110 131 691 251 0 272 369 0 322 453 171 221 510 387 0 311 16 131 142 95 98 181 0 250 155 74 121 156 34 11 71 53 119 45 38 94 0 68 79 33 27 56 72 16 28 44 69 51 21 40 52 16 23 36 25 24 4 4 29 18 30 11 13 4 16 6 9 5 27 12 4 14 14 7 5 27 19 9 13 12 7 2 9 7 2 6 1 7 0 0 4 0 5 2 1 2 2 2 2 0 1 1 0 0 1 4 0 1 1 0 1 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 2 0 0 0 1
.................................................................TAGTAGACCGTATAGCGTAC................................................................................................. 20 0 1 77428.00 77428 10841 1709 11096 1313 5476 5380 2001 1562 933 0 1583 1429 453 771 780 151 3777 594 5770 789 447 269 102 118 320 2090 433 2298 228 797 126 1190 1418 1366 83 1069 1230 0 138 1480 985 118 165 1056 15 454 1 104 337 63 39 114 119 0 142 358 102 35 15 18 173 0 91 74 23 10 120 42 109 17 140 32 129 6 13 0 21 30 6 4 21 13 11 38 24 25 10 2 12 16 3 19 19 12 16 2 24 7 10 15 10 18 6 3 10 4 4 10 5 29 18 7 6 4 2 5 20 5 0 0 1 4 4 9 1 0 3 2 0 1 3 0 5 5 0 2 2 3 2 1 1 6 1 1 0 1 0 2 1 1 1 1 1 1 1 0 0 0 1 2 0 1 1 1 0 0 0 0 0 0
................................................................ATAGTGGACCGTATAGCGTACG................................................................................................ 22 1 1 61791.00 61791 1319 171 8 22602 1 4 64 113 7602 0 82 66 5945 4105 4134 0 189 3347 6 20 2892 3527 8 8 811 7 9 2 291 43 7 346 77 140 4 61 207 0 0 39 0 359 0 0 1638 103 0 170 16 761 0 202 10 0 3 0 3 90 1 0 0 0 7 2 0 53 1 0 0 0 0 1 0 0 2 0 9 0 15 0 3 7 33 2 2 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 1 0 0 0 8 5 4 0 2 0 0 1 2 0 0 0 0 0 2 0 1 0 2 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTGGACCGTATAGCGTACG................................................................................................ 21 1 1 52991.00 52991 793 199 22 13897 2 17 174 263 9747 0 166 131 4681 4950 4494 0 193 3496 9 52 2937 2402 20 26 448 20 65 5 632 83 25 130 46 49 9 30 122 0 9 45 3 256 2 1 1026 67 0 149 40 575 2 66 23 0 0 0 6 42 4 0 1 0 5 12 1 42 1 2 0 2 1 2 0 2 1 0 9 1 35 1 14 21 46 0 0 0 4 1 2 2 1 1 0 1 6 0 0 0 0 0 0 0 0 0 35 21 31 0 2 0 0 2 3 0 0 0 1 0 3 0 2 0 0 1 9 0 0 0 0 0 8 0 0 0 0 0 0 2 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGTAGACCGTATAGCGTAC................................................................................................. 21 0 1 35817.00 35817 1755 1757 3446 1388 2123 1859 751 609 480 3 798 613 343 452 377 78 4110 271 678 347 308 254 47 41 610 116 124 274 102 442 65 1491 850 1651 50 733 1147 0 38 1142 526 187 60 144 28 706 0 159 153 48 25 444 71 0 204 131 49 55 7 11 58 0 44 34 13 31 78 21 70 7 90 20 94 7 10 0 11 59 4 0 7 15 9 42 28 22 16 1 8 9 4 27 8 17 7 0 13 4 4 21 6 10 0 0 1 6 0 12 5 25 8 6 2 6 6 2 8 9 2 1 4 5 8 1 3 4 1 3 0 1 0 0 3 3 1 1 4 0 1 1 1 2 0 2 1 1 1 0 1 0 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGCGT................................................................................................... 18 0 1 27228.00 27228 0 0 13205 4 6346 5426 182 134 11 14 105 117 1 2 7 9 37 3 65 15 2 1 5 8 3 302 171 26 1 18 4 6 32 16 9 82 10 1 63 31 441 1 71 19 0 11 0 1 13 0 1 0 2 0 0 98 1 0 1 0 10 0 4 1 0 0 4 1 32 1 5 0 2 0 0 0 0 0 0 0 0 1 0 0 1 3 0 0 0 0 1 3 2 0 0 1 14 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGTAGACCGTATAGCGT................................................................................................... 19 0 1 25872.00 25872 0 1 5422 44 2841 2216 69 53 19 11 56 55 10 16 12 25 777 12 2056 19 10 7 23 9 47 4777 58 2618 0 18 1 245 606 273 3 660 221 0 21 495 487 11 24 1035 1 231 0 11 5 6 0 6 0 0 5 83 0 0 0 1 5 0 6 4 1 1 12 0 53 0 4 0 8 0 0 0 2 4 0 0 0 0 0 8 7 2 0 0 0 0 0 5 3 9 5 0 5 0 0 2 0 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TATGTAACACGGTCCACTAAT............................................................. 21 1 1 22651.00 22651 1126 2846 2151 37 2289 1808 95 36 193 0 90 83 76 92 108 2266 18 90 24 134 60 45 1193 1274 798 4 863 8 89 17 1103 6 0 10 880 0 14 0 752 23 49 283 345 2 2 6 0 234 6 2 273 7 5 0 56 2 38 81 131 50 7 0 4 2 61 46 10 4 2 40 14 19 6 45 0 0 0 1 0 10 1 0 0 0 0 0 0 10 1 0 10 0 1 0 1 15 0 0 4 0 8 3 10 13 0 0 0 0 2 2 2 0 1 3 0 0 0 1 0 7 1 2 0 0 0 1 1 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGCGTACGATC............................................................................................. 24 2 1 19941.00 19941 0 0 0 0 0 0 0 0 0 15544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 741 0 0 0 0 0 0 0 505 0 0 0 0 0 0 0 0 0 0 0 0 0 163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGCGTA.................................................................................................. 19 0 1 19574.00 19574 0 36 6796 25 3228 2697 489 344 22 19 271 337 6 11 17 22 219 13 399 103 10 2 25 17 14 1167 157 145 11 39 11 60 136 81 5 208 70 0 47 116 1343 4 55 87 0 51 0 10 15 1 1 1 5 0 9 338 2 1 0 0 22 1 13 3 0 1 7 6 116 2 11 2 5 1 0 0 0 2 0 0 0 1 0 1 4 3 0 0 0 0 0 6 1 6 2 0 34 0 0 3 2 2 0 0 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 7 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TATGTAACACGGTCCACTAA.............................................................. 20 0 1 16750.00 16750 2182 941 1196 102 1431 1040 90 23 128 0 48 64 83 114 63 1569 55 70 119 169 77 44 638 862 805 153 815 43 42 18 534 12 21 21 494 9 16 0 605 83 92 259 377 10 17 22 0 252 4 1 185 8 2 0 83 3 20 73 86 75 28 0 5 3 77 45 12 0 3 33 13 13 16 34 0 0 1 0 0 28 0 0 3 0 2 0 0 15 0 1 12 0 2 2 0 3 1 0 5 0 0 3 8 9 0 0 0 0 6 1 3 0 1 6 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................ATAGTGGACCGTATAGCGTAC................................................................................................. 21 1 1 16113.00 16113 0 5 14 4665 0 7 5 11 1113 0 14 8 1275 887 635 0 1483 500 138 1 709 743 1 1 199 27 1 46 18 8 2 934 181 583 0 134 596 0 0 223 1 69 0 6 111 221 0 66 4 163 0 245 3 0 0 1 0 14 0 0 0 0 1 1 0 8 1 0 2 0 0 0 0 0 0 0 2 1 1 0 3 1 6 0 1 0 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGTAGACCGTATAGCGTA.................................................................................................. 20 0 1 14839.00 14839 0 51 4318 37 2308 1809 188 126 11 1 108 105 12 13 12 8 514 7 686 44 9 3 16 7 46 157 54 1111 0 28 8 184 196 256 3 172 121 0 21 264 935 8 18 227 1 178 0 10 8 0 1 20 2 0 16 159 0 4 0 0 6 0 4 2 1 1 3 0 106 1 6 3 8 0 0 0 0 6 0 0 0 1 0 5 4 6 0 0 0 0 0 11 3 11 0 0 16 1 0 2 0 3 0 0 0 1 1 3 0 2 3 0 2 0 0 0 2 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................TAGTGGACCGTATAGCGTAC................................................................................................. 20 1 1 11333.00 11333 0 4 21 1825 2 9 18 18 1137 0 9 5 600 706 572 1 762 414 753 3 411 370 0 0 55 345 10 1246 12 11 1 365 245 297 1 137 292 0 1 202 4 19 0 107 30 114 0 31 1 82 0 15 2 0 1 3 4 3 0 0 0 0 0 0 0 5 1 0 1 0 0 1 0 0 0 0 2 0 1 0 2 6 8 0 0 0 0 0 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 0 4 6 5 0 0 0 0 0 3 0 0 0 0 0 2 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGC..................................................................................................... 16 0 1 8550.00 8550 0 0 3999 8 1947 1898 0 0 0 0 0 0 0 0 0 9 14 0 9 0 0 0 5 4 0 0 275 5 6 36 0 13 1 13 0 0 16 0 67 2 0 0 178 4 0 17 0 0 13 0 0 0 6 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTAGACCGTATAGCGTACGCT.............................................................................................. 22 0 1 8137.00 8137 723 201 685 4 542 578 768 1094 14 13 933 1031 1 2 6 29 36 12 1 385 1 1 29 19 18 0 212 1 34 3 101 22 33 32 88 39 32 0 59 8 24 9 69 0 0 20 0 8 4 0 20 3 1 0 76 6 1 4 7 19 1 0 9 0 28 1 1 2 0 1 2 3 0 2 0 0 0 0 0 6 0 0 0 0 0 1 0 5 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGTAGACCGTATAGCGTACGATC............................................................................................. 25 2 1 7478.00 7478 0 0 0 0 0 0 0 0 0 5699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 418 0 0 1 0 0 0 0 185 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TATGTAACACGGTCCACTAACA............................................................ 22 1 1 7086.00 7086 334 576 685 29 783 557 46 10 41 1 41 37 47 47 26 864 9 19 0 39 57 31 526 493 200 0 329 0 27 12 132 3 6 10 122 6 6 0 332 13 24 59 148 0 9 7 0 53 4 1 39 10 4 0 44 1 10 13 19 27 6 1 1 3 19 18 0 0 1 3 10 5 10 2 0 0 0 1 0 4 0 0 0 2 0 0 0 1 0 0 5 2 0 0 0 2 0 0 0 0 0 4 0 0 0 0 0 2 2 4 1 0 2 2 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGCGTACGA............................................................................................... 22 1 1 6532.00 6532 0 716 113 222 67 79 549 804 70 33 596 630 149 173 52 19 47 57 3 384 119 121 40 23 87 0 117 3 91 230 33 61 28 26 18 38 45 0 23 16 2 24 41 0 15 21 0 22 122 18 6 18 48 1 9 1 27 6 5 8 8 0 37 23 8 8 17 7 0 4 1 11 2 4 0 0 7 2 8 0 2 12 6 11 4 3 5 1 0 3 3 3 2 0 0 0 1 0 4 1 6 1 1 1 3 3 5 3 3 0 1 0 3 2 0 0 0 3 1 0 1 1 1 2 1 0 1 0 0 0 2 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAG...................................................................................................... 15 0 1 6220.00 6220 0 0 2472 1 1872 1808 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 1 0 0 21 0 2 4 0 0 1 3 0 1 0 0 3 0 0 0 16 1 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGTAGACCGTATAG...................................................................................................... 16 0 1 5562.00 5562 0 1 2285 1 1749 1462 0 0 0 0 0 0 0 0 0 4 5 0 2 0 0 0 0 1 0 0 15 1 0 3 0 4 2 7 0 1 1 0 4 0 0 0 6 0 1 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TATGTAACACGGTCCACTAAA............................................................. 21 1 1 5511.00 5511 2621 509 224 13 254 240 28 12 16 0 25 21 21 14 6 388 1 10 1 38 17 9 199 217 84 0 65 1 15 3 62 0 0 5 44 0 4 0 81 1 5 39 41 0 2 1 0 32 2 0 22 1 0 0 17 1 14 9 9 10 1 0 0 0 13 5 2 1 0 6 0 3 0 7 0 0 0 0 0 4 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 4 0 0 0 0 0 0 2 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGTAGACCGTATAGC..................................................................................................... 17 0 1 5103.00 5103 0 1 2345 6 1276 1059 0 0 5 0 0 0 0 8 10 8 25 7 7 0 5 1 3 3 0 20 105 1 6 9 0 17 9 10 0 5 17 0 29 2 0 0 53 0 0 32 0 0 8 0 0 0 0 0 0 0 0 0 0 0 5 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGCGTACGC............................................................................................... 22 0 1 4805.00 4805 2361 565 71 165 45 56 86 75 89 0 72 97 102 53 60 4 10 54 3 37 42 46 8 3 6 0 23 1 236 138 12 9 25 3 9 15 4 0 2 2 5 3 6 0 30 4 0 4 47 11 5 0 34 0 1 0 3 0 1 3 0 0 2 10 3 1 1 3 0 0 1 1 0 0 0 0 6 0 10 3 0 3 5 0 0 0 4 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGCGTACGT............................................................................................... 22 1 1 4212.00 4212 372 780 186 107 105 142 189 264 115 0 170 232 34 64 84 3 45 60 7 284 47 33 7 1 38 0 31 5 45 165 47 24 58 15 32 25 18 0 1 9 0 14 10 2 12 17 0 18 53 9 11 1 24 0 1 0 89 6 3 3 5 0 1 14 2 3 7 5 0 3 1 1 2 2 1 0 3 1 5 0 1 2 5 0 0 0 1 1 0 3 0 0 1 0 1 0 0 0 3 1 4 1 0 1 1 0 2 1 0 0 0 2 3 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGTAGACCGTATAGCGTACGATA............................................................................................. 24 2 1 3825.00 3825 0 0 0 0 0 0 0 0 0 2940 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 630 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 131 0 0 0 0 0 0 0 85 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGTGGACCGTATAGCGT................................................................................................... 19 1 1 2565.00 2565 0 0 11 94 0 3 0 2 11 0 1 0 37 17 9 0 211 7 341 0 7 11 0 0 15 924 1 109 0 0 0 102 94 72 0 123 76 0 0 81 3 4 0 119 1 68 0 1 0 5 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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Anti-sense strand reads

GTCTCCCGAAGGACCTGCACGGGAGTCGGAAACAGGAGCCGCAGAGACACACCATGAACCTCTCTATCATCTGGCATATCGCATGCGAAATAGACACTGCATACATTGTGCCAGGTGATTGGGAGTCATAGTTTAGGTAGGGGCTCCGGGGACCTCTTCTACGACAGAAGCCCCTCTGCGGT
**********************************************(((((((..(((...((((.((((((...(((((((.((.......)))))))))...)))))).))))...))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM361430
brain		 GSM361408
brain		 GSM361407
brain		 GSM361415
brain		 GSM361398
brain		 GSM361395
brain		 GSM361402
brain		 GSM361394
brain		 GSM361399
brain		 SRR345200
brain		 SRR345198
brain		 SRR345202
brain		 SRR345201
brain		 SRR037924
embryo		 SRR345197
brain		 SRR553582
brain		 SRR345206
brain		 SRR391846
embryo		 SRR038741
brain		 SRR345199
brain		 SRR345204
brain		 SRR345207
brain		 SRR073955
blood		 SRR037902
testes		 SRR037920
embryo		 SRR037928
embryo		 SRR073954
blood		 SRR391847
embryo
.................................................................ATCATCTGGCATATCGCATGC................................................................................................ 21 0 1 407.00 407 106 116 67 67 13 12 12 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCATGC................................................................................................ 22 0 1 142.00 142 54 35 20 20 5 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCATGC................................................................................................ 21 1 1 100.00 100 91 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATGC................................................................................................ 22 1 1 83.00 83 73 3 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCATG................................................................................................. 21 0 1 35.00 35 22 4 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATG................................................................................................. 20 0 1 32.00 32 12 5 6 6 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATGCT............................................................................................... 22 1 1 26.00 26 9 0 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATG................................................................................................. 21 1 1 26.00 26 25 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATTG............................................................. 21 0 1 25.00 25 11 6 3 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATT.............................................................. 20 0 1 17.00 17 7 4 2 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATGCA............................................................................................... 22 1 1 13.00 13 4 3 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCATG................................................................................................. 20 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATTC............................................................. 21 1 1 11.00 11 1 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCAT.................................................................................................. 20 1 1 9.00 9 7 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATTA............................................................. 21 1 1 8.00 8 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATTGT............................................................ 22 1 1 7.00 7 1 2 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCATCTGGCATATCGCATGC................................................................................................ 21 1 1 7.00 7 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCATGCA............................................................................................... 23 1 1 7.00 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCAT.................................................................................................. 19 0 1 6.00 6 4 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATGA................................................................................................ 21 1 1 6.00 6 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCAT.................................................................................................. 20 0 1 6.00 6 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATT................................................................................................. 20 1 1 6.00 6 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCA................................................................................................... 19 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCCGGCATATCGCATGC................................................................................................ 21 1 1 5.00 5 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCAT.................................................................................................. 19 1 1 4.00 4 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGTCATATCGCATGC................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATGCT............................................................................................... 23 2 1 4.00 4 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATT................................................................................................. 21 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCATGCT............................................................................................... 23 1 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGCCATATCGCATGC................................................................................................ 21 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGTCATATCGCATGC................................................................................................ 21 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAATCTGGCATATCGCATGCA............................................................................................... 22 2 1 3.00 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATAAATTGTGCCAGGTGATTG............................................................. 21 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGACATATCGCATGC................................................................................................ 21 1 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCATGCT............................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAATCTGGCATATCGCATGC................................................................................................ 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ACCACCTGGCATATCGCATGC................................................................................................ 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCAGGCATATCGCATGCT............................................................................................... 23 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCCGGCATATCGCATGC................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTCGCATATCGCATGC................................................................................................ 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCTCTGGCATATCGCATGCA............................................................................................... 22 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCCGGCATATCGCAT.................................................................................................. 20 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATGCGT.............................................................................................. 23 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCTCATCTGGCATATCGCATGC................................................................................................ 22 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTTTGCCAGGTGATTG............................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCAGGCATATCGCATGC................................................................................................ 21 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCATCTGGCATATCGCATGCGC.............................................................................................. 22 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATCCATTGTGCCAGGTGATT.............................................................. 20 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCATCTGGCATATCGCATGCA............................................................................................... 22 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACTTGGCATATCGCATGC................................................................................................ 21 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCACCTGGCATATCGCATGC................................................................................................ 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCCCTGGCATATCGCATGC................................................................................................ 21 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCATGCG............................................................................................... 22 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATGT................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATGCA............................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCATCTGGCATATCGCATGC................................................................................................ 20 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CTACATTGTGCCAGGTGATTG............................................................. 21 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCCCCTGGCATATCGCATGC................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATATGGCATATCGCATGC................................................................................................ 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................CATCTGGCATATCGCATGC................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATCCATTGTGCCAGGTGATTGA............................................................ 22 2 2 1.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATAGCGCATGC................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCATGCTT.............................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATACATTGTGCCAGGTGATTG............................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCCGGCATATCGCATGC................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCA................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATATGGCATATCGCATGC................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATCC................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATTTGGCATATCGCATGC................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCTCTTGCATATCGCATGCA............................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGCCATATCGCATGCT............................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TACCACCTGACATATCGCATGC................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAATATGGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCTCACCTGCCATATCGCATGC................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCACCTGGCATATCGCATGCGA.............................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCTCACCTGGCATATCGCATGC................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATACTCTGGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCCCCTGTCATATCGCATGC................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGAT............................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCAATGTGCCAGGTGAT............................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTACCATATCGCATGCA............................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCGGGCATATCGCATG................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTCGCATATCGCATG................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATA................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATAA............................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCACCTGGCATATCGCATGCG............................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGCATGCGTTATGCCAGGTGAT............................................................... 22 3 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTCACCTGGCATATCGCATG................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAACCTGGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCATCTGGCATATCGCATGCGA.............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCACCTGGCATATCGCATGCT............................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAATCTGGCATATCGCATG................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCGTTGTGCCAGGTGAT............................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCGGGCATATCGCATGC................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCCCCTGGCATATCGCATGC................................................................................................ 21 3 2 1.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATTGA............................................................ 22 1 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAATCTGGCATATCGCATGCG............................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCCAGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCATT................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAACCTGGCATATCGCATG................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTGGCATAGCGCATGCGA.............................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGGCACATCGCATGC................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTAGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATAATCTGGCATATCGCATGC................................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGACATATCGCATGC................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGCCATATCGCATGC................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGTGCCAGGTGATTT............................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAATCAGGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATCTCGCATGC................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GCATGCGTTGTGCCAGGTGGT............................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGC.................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCTTCTGGCATATCGCATGC................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCATCTTGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCATTATGCCAGGTGAT............................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCTGTCATATCGCATGC................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTGCGCCAGGTGATTG............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGGCATATCGCATGCAA.............................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCATCTGGCATATCGCATGCAAA............................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCATGCATATCGCATGC................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTCATCTGGCATATCGCATGC................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ACCATCTGGCATATCGCATGC................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTACATTGTGCCAGGTGATT.............................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCATGT................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGCATGT................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCACCCGGCATATCGCATGC................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACATGCCATATCGCATGC................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGACATATCGCATGC................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TACCACCTGGCATATCGCATG................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCATCTGGCATATCGAATGA................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCCCCTTGCATATCGCATGC................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATACATTCTGCCAGGTGATTGT............................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCATCTGGCATATCGCATT................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCATTGTGCCAGATGAT............................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACTTGGCATATCGCA................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATACATTGTGCCAGGGCAT............................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGCATGCGTTCTGCCAGGTGAT............................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TATCACCTGCCATATCGCATGA................................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GTATCACATGGCATATCGCATG................................................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GCATCCAATATGCCAGGTGAT............................................................... 21 3 5 0.40 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................ATCACCTGGCATATCGCATACA............................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGAATTGTGCCAGGTGAT............................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGCATGCTTTGTGCCAGGTGT................................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGCATACGATATGCCAGGTGAT............................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................GCATGCCATGTGCCAGGTGAT............................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTGTGCCAGGTGAT............................................................... 14 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ACATGCATTATGCCAGGTGAT............................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GCATTCAATATGCCAGGTGAT............................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................GGGAGTCGGAAACAGGA................................................................................................................................................. 17 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATACGTTATGCCAGGGGAT............................................................... 20 3 20 0.20 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTGGCATTCCGCATGCG............................................................................................... 17 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CGTGCGTTGTGCCAGGTGAT............................................................... 20 3 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
....................................................................GTCTGGCATAGCGCATGCGT.............................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GGGAAACAGGAGCCGC............................................................................................................................................ 16 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATACAATATGCCAGGTGATA.............................................................. 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TACCACCTTGCATATCGCATG................................................................................................. 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGCAATGTGCCAGGTGAT............................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCCTTATGCCAGGTGAT............................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGGAGCCGCAGACACAC.................................................................................................................................... 17 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................CATACCATGTGCCAGGTGATA.............................................................. 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCGTTGTGCCAGGAGAT............................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CGTGCAATGTGCCAGGTGAT............................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................GCGGAAACAGGAGCCG............................................................................................................................................. 16 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATACGATGTGCCAGGTGATA.............................................................. 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCATTATGCCATGTGAT............................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTAGTCTAGGTAGGGGCTC.................................... 19 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................CGTAGTTGAGGTAGGGGCT..................................... 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................TAGTTGAGGTAGGCGCTC.................................... 18 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TATGCATTGTGCCAGATGAT............................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGCGTTGTGCCAGGGGAT............................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................TCGCATAGCGCATGCGGA............................................................................................. 18 3 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCAGCTGGCATATGGC.................................................................................................... 16 2 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATACGTTATGCCAGGTCAT............................................................... 20 3 19 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AAACAGGAGCAGCAGA......................................................................................................................................... 16 1 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATGCATTGTGTCAGGTGAT............................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................GACACTGCAT................................................................................ 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................TGTGCATTGTGCCAGGTGAT............................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TGTGGCATATCGCA................................................................................................... 14 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GCATCTGGCATATGGC.................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTTGCCAGGTGAT............................................................... 14 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................ACCATGAAGCTCGCTAGCA................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................ACCGGAGCAGCAGAGACA..................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATCCATAGTGCCAGGTGAT............................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATGTATTATGCCAGGTGAT............................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GCATATATTGCGCCAG.................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCGCATTGCGCATGCGA.............................................................................................. 17 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................CCCGGCATAGCGCATGCG............................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................CATCCGATGTGCCAGGTGAT............................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TGACATCTTGCATGCGAAAT........................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................GACAGAAGCCTCTCTGCC.. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr12:109710125-109710306 + mmu-mir-411 CA-----GAGGGCTTCCTGGACGTG----CCCTCAGCCTTTGTCCTCGGC---GTCTCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCCCCTGGAGAAGATGCTGTCTTCGGGGAGACGCCA
cavPor3 scaffold_111:1083206-1083387 + CG-----GAGGGCTCTCGGGACGCG----TCCTCCACCTTTGTCCTCGGT---GTCTCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTGGAAGCAACGCTATCACCGGGGAGGTGCCG
dipOrd1 scaffold_11516:4191-4376 + CGCCCCGGAGGGCTTTCTGGATGCG----CCAGCGGTCTCTGTCCTCGGA---GTCTCTATGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTG-AAACCACGCTGTCGCCGGGGAGGCATCA
hetGal2 Unknown --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_28343:5721-5889 + CA-----GAGGGCTTCCTGGACGTGGGCTTCCTCA-CCTTTGTCCTCGGC---A-CCCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCAGGACGCAGCGCCGTC---------------
oryCun2 chrUn0352:122823-123003 + CG-----GAGGGCTTCCTGGAAGCG----TGCTCA-CCTTTGTCCTCGGC---GCCCTTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTGGAAACGCCGCCGTCTTCGGGGAGGCGCCC
rn5 chr6:143020963-143021146 + rno-mir-411 CA---GAGAGGGCTTCCTGGACGCA----CCCTCAGCCTTTGTCCTCGGC---GTCTCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCCCCTGGAGAGGACGCTGTCTTCGGGGAGACGCCA
speTri2 JH393414:4772876-4773060 + CG-----GAGGCCTTTCTGGACGTG----TCCTCGGTCCTTGTCCTCGGCGGCGTCTCTGTGTGGTACTCGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTGGAAACGCCGCTGTCTTCGGGGAGGCGCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
CA-----GAGGGCTTCCTGGACGTG----CCCTCAGCCTTTGTCCTCGGC---GTCTCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCCCCTGGAGAAGATGCTGTCTTCGGGGAGACGCCASizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
Type_A_spermatogonia		SRR069810
pachytene_spermatocytes		SRR069811
round_spermatid		SRR248523
Thy1+_spermatogonia		SRR248524
Thy1+_spermatogonia		SRR248525
Thy1-_somatic_testes_cells		SRR248526
Thy1-_somatic_testes_cells		SRR248527
spermatogonia		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
sertoli_cells		SRR553603
spermatids		SRR553604
spermatocytes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus		SRR1509747
oocyte		SRR1509748
spermatozoa		SRR1509749
zygote		SRR1509750
spermatogonia		SRR1509751
foetal_primordial_germ_cells		SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		SRR1647951
Dgcr8_WT_pachytene_spermatocytes		SRR1647952
Dgcr8_cKO_pachytene_spermatocytes		SRR1647953
Dicer_WT_pachytene_spermatocytes		SRR1647954
Dicer_cKO_pachytene_spermatocytes
.............................................................................TAGTAGACCGTATAGCGTACG................................................................................................211370811.003708110000332201210124610000000001805148462788154288052303986151254172928862155379362423951941764367934731231617429335718732676711802303206157122189281155795957093282161511957551075123885111659021480163061993610661609132520170021221212763947481037278840723154726351250420000014291829324041547232441455310002070723000262113000626307101239048294318591314439710800000005526355293384637817016500015061000120771074623123349
................................................................................................................TATGTAACACGGTCCACTAAC.............................................................211231403.002314030000363800000191810000000003008172899112624611452193116222210291720104814620837159958016114120265190121595576019323434331141231646014097469228992199115473961136071481311217472183119695708610318710060201441410000113290110004621200000000107511411251230100071000000015110000120970031401364974197900000001287263703520111000011370000011030001
............................................................................ATAGTAGACCGTATAGCGTACG................................................................................................221137025.00137025000044201011197000000000016801213226911421423237718165102501297171010811687584585117061540536931145111031095388778221277498211638711637933476294851013025120826734633115834611166246890311260283962911105066091272142210021235241327997137213170000023442516340111847928362441400013102010001561150002512120418169301553874531572560000000449927217116164051526800104553000002940279421019
.............................................................................TAGTAGACCGTATAGCGTAC.................................................................................................20177428.0077428010026001003201000000000320101041183559493378011491269453447771209010695770229810561418377745412301190148013661583126394231823617311096538054764331381651181511026011429200115831562142170910841109114310114013735162957890510204318611024011221924123584201010130381916241811098512020001201100000450202917325157411933779721000000013131563112281016210001129140000007122130105
............................................................................ATAGTAGACCGTATAGCGTAC.................................................................................................21135817.00358170000000020020100000000006103115918755271480377444442543433084521167336782741448504110706114714911142165175065250131114770344618592123124386041784741061375179860920417571755702000131621560302113347191285110244980000327281713121064159428713830052611000007811000016544025582221347115344270000000138828489102169110000949000030486100002
.............................................................................TAGTAGACCGTATAGCGT...................................................................................................18127228.0027228030010000000000000000003011031170411223028265261932371110631161941000010101320554266346171637189500011718210513400032000000000100000000150000000001000002310981001000201400004411000000400000000000001031121318000000004000100000002500014100000000
............................................................................ATAGTAGACCGTATAGCGT...................................................................................................19125872.00258720000000000000000000000047111110121912667101016477766020562618103560677723122124549527303100110000054222216284158212492523000556956535105300000002000000000019010400300000000157983000004835500004873000000120000000000000522405180000000044160000200008400011000000000
................................................................................................................TATGTAACACGGTCCACTAAT.............................................................21122651.002265100001510000001971000000000798462342838190193108744576609240248201861462310131880110327310615010104540132151180822898637523451274226611930118395903656284611262000000000000000000134010021311380000010002408421011020004900000001000000013210027002561710000000372208900000006140000001000000
.............................................................................TAGTAGACCGTATAGCGTA..................................................................................................19119574.001957400000000000200000000000141104113221711326101111672083991458713621951706011681051110000012067962697322815747551722250003374892713449360116000000000100000000103001111200200010764633860201211234200013431001000700000000001012233351539000000002501011000000051110019000000000
................................................................................................................TATGTAACACGGTCCACTAA..............................................................20116750.0016750010038000001300000000000805452522597370128638544837711415391194310215522161283218649453418528777515123433911961040143181560537786215696380006490482383941218230000000000000000001690000003102000000002230005100201301092000000012110000166200128003241800000000102171342011000016130000000000000
............................................................................ATAGTAGACCGTATAGCGTA..................................................................................................20114839.00148393000000000030000000000046110847111220431291315717268611112271965141781211842642560381010000104318180923085421187816000105188108126165101060010000101000010114400320032000011041141115900000653016300093500000003110000000000266222828000000003710000000000860001010000000
.............................................................................TAGTAGACCGTATAGC.....................................................................................................1618550.008550000000000000000000000000000000000000000954114171613213000000000000399918981947275671784950000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026133620000000800060100000000000000000000
..............................................................................AGTAGACCGTATAGCGTACGCT..............................................................................................2218137.0081370000000000030000000000018189412146391112039110333620322283278810120628195221068557854221259691929290001031768933109476201723000000000000000000038500010000010000000006200100000000002401000001111000023000011001430000000040003400000000200013000000001
................................................................................................................TATGTAACACGGTCCACTAACA............................................................2217086.00708600002000000500000000000200185359131941261013147574706000697631310191221323941927152306855577833293321484938645260003746411044576334100000000000000000039022110420100000002001000001200010002400000000000000122000460034412000000002991027000000010101001000000000
.............................................................................TAGTAGACCGTATAGCGTACGA...............................................................................................2216532.006532000001000001100000000000878222465770521837121149119173038330284721456116265183360881344111379671172341231940800630549596804971600005231031120010022038403301113127100000340170640211201100020000000170000000230000831234812223020000000222151869153700002100133000000000
.............................................................................TAGTAGACCGTATAG......................................................................................................1516220.00622000000000000000000000000000000000000000100114900030000000000002472180818722131610100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000100020000000000000000000000
............................................................................ATAGTAGACCGTATAG......................................................................................................1615562.0055620000000000000000000000000000000000000012102561407000000000000228514621749154614000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000110000000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAAA.............................................................2115511.005511000042000003000000000008453239910166109211714001100114015944622241310127612242402546581412173881990002128251217509262100010000000000000003800000000114000000000110000000000000500000002000000001000110000231000000013200150000000000000000000000
............................................................................ATAGTAGACCGTATAGC.....................................................................................................1715103.00510300000000000000000000000000007510021058205710925321717210000000000000234510591276105295338300000000100000000000000000000001000000000000000000000000000000000000000000000000000000500308900000000600060000000000000000000000
.............................................................................TAGTAGACCGTATAGCGTACGC...............................................................................................2214805.00480500000000000100000000000614305489600246102425301531025104492319125333010017156452326348100097867275156523610000000010300000000370000000003000000000030000000000000500000001110000000000000010344713800000000165301152364160000010000000000000
.............................................................................TAGTAGACCGTATAGCGTACGT...............................................................................................2214212.00421200000000000100000000000383181466011584113334476402575258451718249153324711023102311861421053111013751023218917026417803720002010000220000010284001000131891000000000504301011000000000000070000000001000501142453165100000001071295451330000210000000010000
..............................................................................AGTAGACCGTATAGCGTACG................................................................................................2012561.0025610000000000000000000000022138292951050242191023263164148166253641434704211220100616141263429100001211601482233190514002002000310000000004300000010060000000000001100000000002000000011100001010000000168170000000011200580100000000000011000000
.............................................................................TAGTAGACCGTATAGCG....................................................................................................1712401.002401000000000000000000000000000021201103012953066227110000000000001123510532852040611400000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000020000000000
............................................................................ATAGTAGACCGTATAGCGTACGA...............................................................................................2312282.002282000000000008000000000007231225622422928314472407103100519305989421141020053010028251923611639000166128183185132000000200000021100000011101200002310000000342210200815500000101000005003000000000031092019550000000015411503805200000000105000000000
................................................................................................................TATGTAACACGGTCCACTAACC............................................................2212263.002263000002000002000000000001451244401236574750426124490020007045207584015128010201361061025559181562121210006845539610000000000000000000100000000040000000000000000000000002000000001100000100000000023300000000841510220000000010000000000000
.................................................................................................................ATGTAACACGGTCCACTAAC.............................................................2012220.00222000000000000000000000000400301411120001200010000000000351000000001120172653231637200000010012017840000000000100000000000000000020000000000000000000000000000000000000000000000100000000000000100030000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAACT............................................................2222149.50429900001000000411000000000196107089152753411202841496103100464547101286108290991587128721328813091511222091192101722129137436933000000000020120110260310116315600000001070001032100000014000000040000000130002200544181000000037900230000000900000000000000
.............................................................................TAGTAGACCGTATAGCGTACATC..............................................................................................2311851.00185100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142131154424100000000
............................................................................ATAGTAGACCGTATAGCG....................................................................................................1811794.0017940000000000000000000000030000311401011138152191919135412105000000000000582328366472011652000330105140300000002000000000010000000000000001010800000000010000510000000100000000000000002021000000001000000000000000014000000000
............................................................................ATAGTAGACCGTATAGCGTAA.................................................................................................2111771.0017710000000000010000000000059014972335301033151026530612237382921311321740000010000001853000000000103973810291000000100000000215010021000600000381157000007731200006000000080000000000002200302400000000702000000000540001000000000
............................................................................ATAGTAGACCGTATAGCGTACGT...............................................................................................2311614.0016140000010000000000000000032310611337269614291124000000293122398321131650120010076473851032100064455686313629700000000001000000001000100000411600000000000030000000000000001000800700000000001109111657000000006787171120000000000000010000
................................................................................................................TATGTAACACGGTCCACTAATT............................................................2221438.502877000011000001311000000000121636268124028528915210000004235838789219168107504013054151191004994181880001214561334100000000001000000000130383104006000000000200001000001000190000000400000001100005000337000000009110280000000320000000000000
................................................................................................................TATGTAACACGGTCCACTA...............................................................1911372.00137200000200000300000000000835263431243200114131423219472048710275871247601546132138261497968222045682610036632001000000000000000000340001001005000000000000000001000000160000000000000001000002000104000000002120080000000110000000000000
..............................................................................AGTAGACCGTATAGCGTACGCTA.............................................................................................2311319.00131900000000000000000000000001100000000000000000010000240010000101821232020010002814203240113000000000000000000001100000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000
.............................................................................TAGTAGACCGTATAGCGTAA.................................................................................................2011225.0012250000000000000000000000023091011223001125134173844653130276145985602010000220034291711010020018211529333313000001000010001110400000010070000004228100004300010004000000090000000000000615201200000000200000000000640000010000000
..............................................................................................................CGTATGTAACACGGTCCACTAA..............................................................2211185.001185000000000005000000000004001122021000000000015003131524510000000171143212142875743553600053412691000000000000000000006000000000000000000000000000000000022000000001000000020000000000000000000000020000000000000000000000
................................................................................TAGACCGTATAGCGTAC.................................................................................................1711043.001043000000000000000000000000000033100000200000020011200000000000053501000100000000010090000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000100010000000000000000000000
....................................................................................CCGTATAGCGTACG................................................................................................1411042.001042000000000000000000000000000000000000000000000000000000000000000000000000000000710350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AGTAGACCGTATAGCGTAC.................................................................................................191980.009800000000000000100000000018121114282700307395474016281723317711160232000000001718110424602200024271826112311000000001200000000400000010010000000002000000000000018000000000000000000001000002500000000300010000000300000000000000
................................................................................................................TATGTAACACGGTCCACTATT.............................................................211878.008780000300000021100000000020224141352126273040025100004292381340013076491284737166670300003692131050100000000000000000050012012001000000000000000001002000120000000100000000100000000012000000005000110000000030000000000000
............................................................................ATAGTAGACCGTATAGCGTACATC..............................................................................................241819.0081900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123526846800000000
..............................................................................AGTAGACCGTATAGCGTACGC...............................................................................................211807.00807000001000000000000000004011125492310813892931012166471703310000000054303082212100075937772223000000000001000000002700000000000000000100101000000000003000000010100000000000100234101000000015000440000000000000000000000
.............................................................................TAGTAGACCGTATA.......................................................................................................141798.00798000000000000000000000000000000000000061106875111675327302114380000000000000000000000000000017350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAATA............................................................221796.00796000000000003000000000009130212010141200110002002111323503200020948513752531461105471003141619000000000000000000001001000001020000000000000000000000002000000000000000010000000000200000000100030000000000013000000000
.............................................................................TAGTAGACCGTATAGCGTACA................................................................................................211780.00780000000000002000000000007023327764611512647411111456528212899340000000000006105001002100392925250153110000000000000000001000111000060000000104400000410000001000000020000000000000421023800000000912030000000330000000000000
............................................................................ATAGTAGACCGTATA.......................................................................................................151736.0073600000000000000000000000000000000000001043161285269545261115500000000000051256600100000000000136110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000000
..................................................................................................................TGTAACACGGTCCACTAAC.............................................................191700.00700000000000000000000000008012000200000000000000000001500000000013326738300001000236160000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000200020000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAACATC..........................................................241694.00694000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452538724200000000
............................................................................ATAGTAGACCGTATAGCGC...................................................................................................191684.006840000000000000000000000000000000000000715218218711434213421000000000000194800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAT..............................................................201598.0059800001000000111000000000291783267111334201940050000051920407110050453561423911315918000335469000000000000000000002000000000060000000000000000000000008000000000000001101001200000000000000003010000000200000000000000
.............................................................................TAGTAGACCGTATAGCGTACAA...............................................................................................221573.005730000000000020000000000000010010162000114138943417743430421184000000000000000000100000003011100000000000000000000100001010000000002100000000000010000000000000000000000100222001000000000200000000000250001000000000
.............................................................................TAGTAGACCGTATAGCGTACGAA..............................................................................................231572.0057200000000000700000000000100200007330131427432264623537211252100000000004102711300000022222435213000000000000000001001001320000010000001010002001135010003000000010010000000000000023400000000100000000000330000000000000
................................................................................TAGACCGTATAGCGTACG................................................................................................181539.005390000000000010000000000050110810800105400000000100001185200000209601556158010629859700701000000000000000000017000000000000000000000001000000000000000000000000000000000000202000000005601160000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAAAA............................................................221516.00516000010000001000000000001212602100023010000000000011108101201000525148112125495520003592422000000000000000000001000000000031000000000000100000000000000000000000000000000000002000000000300070000000010000000000000
.............................................................................TAGTAGACCGTATAGCGTAT.................................................................................................201487.00487000000000000000000000000020104201010030491615820271814513400200000000018151010100000002041501000000000000000000100000010000000000003600000000000000000000030000000000000100002300000000102000000000200001000000000
............................................................................ATAGTAGACCGTATAGCGG...................................................................................................191445.00445000000000000000000000000010000000000073308310373151012831000000000000255500000000010101000000000000000000000000000000000000000003000000000000001000000000000000000000000000000000000000000000000000000000000000
.............................................................................TAGTAGACCGTATAGCGTACT................................................................................................211432.004320000000000040000000000080121352102031437891103491417891131000000002115163010010009881312113200000000000000000010100010000200000000012000001000000030000000000000000000012000043000000007800120000000340000000000000
...............................................................................GTAGACCGTATAGCGTACG................................................................................................191428.004280000000000000000000000010000193934004932000000000000200200000000261825114000495549551160000000000000000000025000000000000000000000010000000000000000000000000000000000002124000000002401160000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTACA................................................................................................221401.00401000010000000000000000001013112341605799061203483631282219001000200000443101011000913161325500000000000000000005000100000020000002211000010000000020000000100000000000000000105000000002302000010000200000000000000
...................................................................................ACCGTATAGCGTACGCT..............................................................................................171400.0040000000000000000000000000000000110000000000000000000000000000000000000000000000003980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TAGTAGACCGTATAGCGTACATA..............................................................................................231397.00397000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853136900000000
................................................................................................................TATGTAACACGGTCCACTAACG............................................................221385.0038500000000000100000000000701303112019120000003000000312000000101422162823852925400033523900000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000200020000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTACGAA..............................................................................................241368.00368000000000006000000000002000000013190000011001333366108112100000000000011072200000041483000000000000000000000210000000001000002110000004012000000000000000000000000000110000000000000000000000000210000000000000
................................................................................................................TATGTAACACGGTCCACTAAG.............................................................211329.0032900000000000000000000000202313330010381413000000000000053000200110171215910316361200027530190000000001110000000060000000000000000000000000000000000000000000000000000000010000040000000023200200000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAACAA...........................................................231299.0029900000000000300000000000501100001101210000001100000150010001003440491611833351700022317700000000000000000000300000010000000000000000000021000000000000000000000000000000000000000000000000000000010000000000000
............................................................................ATAGTAGACCGTATAGCGA...................................................................................................191289.00289000000000000000000000001000000000000058157159391460015100000000001072100000000000000000000000000000000000000000000000000002111000000000000001000000010000000000000000000000000000000000000000100000000000000
..............................................................................AGTAGACCGTATAGCGTACGCTT.............................................................................................231286.0028600000000000000000000000000000200100000000001000120350000000006242382510100002318203050000000000000000000001400000000010000000000000000000000000000000000000000000000000011000000000120040000000000000000000000
................................................................................................................TATGTAACACGGTCCACT................................................................181282.0028200000200000051000000000102622723140059610305300120002131725701200000731021334101149322000000000000000000000300000000000000000000000000000000000000000000000000000000000312400000000300060000000100000000000000
.............................................................................TAGTAGACCGTATAGCGTACC................................................................................................211272.002720000000000000000000000010000032000012102001012310101310000000198400010100027131260832300000000000000000008000000000000000001003400000000000001000000000000000000000000002000000000300000000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTACGG...............................................................................................231272.00272000000000000000000000000000010000110200000050393261135800000000000011210000000011100110000000000000000000200000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTACT................................................................................................221260.0026000000000000000000000000111020012122112000100810119204600300010000078500000100012412410411000000000000000002020000000000000000000001000000000010000000000000000001000000000000000007001020000000120000000000000
.....................................................................................CGTATAGCGTACG................................................................................................131229.0022900000000000000000000000000000000000000000000000000000000000000000000000000000002290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AGTAGACCGTATAGCGT...................................................................................................171228.002280000000000000000000000000000000000000000000000010000000000000106467310100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTACAA...............................................................................................231224.00224000000000000000000000001000000014000000222074334725501900000000000000000000000011002000000000000000000000000000000000000001010000001200000000000000010000000000001100000100000000100010000000210000000000000
..............................................................................................................CGTATGTAACACGGTCCACTA...............................................................211193.001930000000000000000000000000000010100100000000000001126000000000271429282018916700000103000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000010000000100000000000000
..............................................................................................................CGTATGTAACACGGTCCACTAT..............................................................221191.001910000000000000000000000010000120000000000000010000211201000000211835182411988000000041800000000000000000000100000000000000000000000000000000003000000000000000000000000000000000000000010000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTACC................................................................................................221189.0018900000000000000000000000200220001001220304203724013000200000001043310000000011933039000000000000000000002000000000000000000001000000000000000000000000000000000000100000000000000100010000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTAT.................................................................................................211185.0018500000000000000000000000502010103000006889013338511911000000000000126400000000021011402000000000000001000000100000000000001000300001000000002000000010000000000000100000200000000500001000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTACATA..............................................................................................241184.00184000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071591300000000
.............................................................................TAGTAGACCGTATAGCGTACGG...............................................................................................221182.0018200000000000000000000000201002200013310112405120371211501000000000012321021410032240400000000000000000000400000000000000000000000000000000000000000000000000000000000000100000000201000000000000000000000000
..............................................................................AGTAGACCGTATAGCGTA..................................................................................................181175.00175000000000000000000000001000000000000020315020210001100000010042132843110000014201560000000000000000000000200000000000000000000000001000000005000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CGTATGTAACACGGTCCACTAAA.............................................................231173.00173000000000000000000000000000010000000000000000000001010000000037233848112171100010014900010000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................GTATGTAACACGGTCCACTAAC.............................................................221167.001670000000000000000000000030100253002124200000000000000101000000010810341773000000006500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000420070000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAATAA...........................................................231163.0016300000000000000000000000000000000000010000000000000431002000002226266748157000000112900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAACATA..........................................................241161.0016100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427836500000000
................................................................................................................TATGTAACACGGTCCAC.................................................................171153.0015300000000000000000000000000001540000030041000000100000000000002819351213939300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100010000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAG..............................................................201143.00143000000000000000000000000001031000132676002000300000026000100010433310317600004101000000000000010000000300000000000000000000000000000000000000000000000000000000000100100000000930070000000000000000000000
..............................................................................................................CGTATGTAACACGGTCCACTAAT.............................................................231138.001380000000000000000000000000000000000000000000000000121100000000281940134339400001000000000000000000000000700000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000
................................................................................................................TATGTAACACGGTCCACTAAGA............................................................221136.001360000000000000000000000000000000007644000000000000000000000000432610212725000000001100000000001000000000000000000000000000000000000000100000000000000000000000000000000100000000030080000000010000000000000
.............................................................................TAGTAGACCGTATAGCGTACGCTT.............................................................................................241129.0012900000000000000000000000000000112123230020000020000000000010001121000000001253606700000000001000000000200000000010000000000000000200000000000000000000000000000000000000000000210020000000000000000000000
.............................................................................TAGTAGACCGTATAGCGC...................................................................................................181121.00121000000000000000000000000000000000000077133310000000010000000028382600000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................ATAGTAGACCGTATAGCGTT..................................................................................................201119.0011900000000000000000000000100000000000006722382571415500100000000054400000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TAGTAGACCGTATAGCGTAG.................................................................................................201119.0011900000000000000000000000100000410043136613547111221200000000000029300010000022000001000000000000000000000000000000000000000000000000000000000000000000000000000000003700000000901110000000000000000000000
cavPor3
CG-----GAGGGCTCTCGGGACGCG----TCCTCCACCTTTGTCCTCGGT---GTCTCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTGGAAGCAACGCTATCACCGGGGAGGTGCCGSizeHit CountTotal NormTotal
No Reads
dipOrd1
CGCCCCGGAGGGCTTTCTGGATGCG----CCAGCGGTCTCTGTCCTCGGA---GTCTCTATGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTG-AAACCACGCTGTCGCCGGGGAGGCATCASizeHit CountTotal NormTotal
No Reads
hetGal2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
CA-----GAGGGCTTCCTGGACGTGGGCTTCCTCA-CCTTTGTCCTCGGC---A-CCCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCAGGACGCAGCGCCGTC---------------SizeHit CountTotal NormTotal
No Reads
oryCun2
CG-----GAGGGCTTCCTGGAAGCG----TGCTCA-CCTTTGTCCTCGGC---GCCCTTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTGGAAACGCCGCCGTCTTCGGGGAGGCGCCCSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
............................................................................ATAGTAGACCGTATAGCGTACG................................................................................................22121.0021201
.............................................................................TAGTAGACCGTATAGCGTACG................................................................................................21116.0016160
............................................................................ATAGTAGACCGTATAGCGTA..................................................................................................2018.00835
............................................................................ATAGTAGACCGTATAGCGTAC.................................................................................................2116.00660
............................................................................ATAGTAGACCGTATAGCGT...................................................................................................1914.00404
.............................................................................TAGTAGACCGTATAGCGTA..................................................................................................1913.00303
...........................................................................GATAGTAGACCGTATAGCG....................................................................................................1911.00101
.............................................................................TAGTAGACCGTATAGCGT...................................................................................................1811.00101
..............................................................................AGTAGACCGTATAGCGTACGCTTTATCT........................................................................................2811.00101
................................................................................................................TATGTAACACGGTCCACTAA..............................................................2011.00101
.............................................................................TAGTAGACCGTATAGCGTACGA...............................................................................................2211.00110
rn5
CA---GAGAGGGCTTCCTGGACGCA----CCCTCAGCCTTTGTCCTCGGC---GTCTCTGTGTGGTACTTGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCCCCTGGAGAGGACGCTGTCTTCGGGGAGACGCCASizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
............................................................................ATAGTAGACCGTATAGCGTA..................................................................................................201270.00270000
................................................................................................................TATGTAACACGGTCCACTA...............................................................191102.00102000
.............................................................................TAGTAGACCGTATAGCGTA..................................................................................................19193.0093000
............................................................................ATAGTAGACCGTATAGCGTAC.................................................................................................21181.0081000
................................................................................................................TATGTAACACGGTCCACTAA..............................................................20146.0046000
............................................................................ATAGTAGACCGTATAGCGT...................................................................................................19140.0040000
................................................................................................................TATGTAACACGGTCCACT................................................................18125.0025000
.............................................................................TAGTAGACCGTATAGCGT...................................................................................................18115.0015000
.............................................................................TAGTAGACCGTATAGCGTAC.................................................................................................20113.0013000
.................................................................................................................ATGTAACACGGTCCACTA...............................................................18111.0011000
................................................................................................................TATGTAACACGGTCCACTAAT.............................................................2119.009000
............................................................................ATAGTAGACCGTATAGCGTACG................................................................................................2216.006000
................................................................................................................TATGTAACACGGTCCACTAAC.............................................................2116.006000
.............................................................................TAGTAGACCGTATAGCGTACG................................................................................................2115.005000
.................................................................................................................ATGTAACACGGTCCACTAA..............................................................1915.005000
..............................................................................AGTAGACCGTATAGCGTACG................................................................................................2014.004000
..............................................................................AGTAGACCGTATAGCGTACGCT..............................................................................................2214.004000
..............................................................................AGTAGACCGTATAGCGTACGC...............................................................................................2113.003000
................................................................................................................TATGTAACACGGTCCACTC...............................................................1912.002000
..............................................................................AGTAGACCGTATAGCGTA..................................................................................................1812.002000
............................................................................ATAGTAGACCGTATAGCGTACGA...............................................................................................2312.002000
.............................................................................TAGTAGACCGTATAGCGTACGCT..............................................................................................2312.002000
..............................................................................................................CGTATGTAACACGGTCCACT................................................................2012.002000
.............................................................................TAGTAGACCGTATAGCGTACGT...............................................................................................2212.002000
...................................................................................................................GTAACACGGTCCACTAA..............................................................1712.002000
.............................................................................TAGTAGACCGTATAGCGTT..................................................................................................1911.001000
...............................................................................................................GTATGTAACACGGTCCACT................................................................1911.001000
............................................................................ATAGTAGACCGTATAGCGTACAA...............................................................................................2311.001000
............................................................................ATAGTAGACCGTATAGCGTACGT...............................................................................................2311.001000
.............................................................................TAGTAGACCGTATAGCG....................................................................................................1711.001000
.............................................................................................................ACGTATGTAACACGGTCCACT................................................................2111.001000
.............................................................................TAGTAGACCGTATAGCGTACGCTT.............................................................................................2411.001000
.............................................................................TAGTAGACCGTATAGCGTACGA...............................................................................................2211.001000
..............................................................................AGTAGACCGTATAGCGTACGCTTA............................................................................................2411.001000
.............................................................................TAGTAGACCGTATAGCGTACGC...............................................................................................2211.001000
.................................................................................................................ATGTAACACGGTCCACTAAT.............................................................2011.001000
..............................................................................AGTAGACCGTATAGCGTACGCTTTA...........................................................................................2511.001000
.............................................................................TAGTAGACCGTATAGCGTACGAC..............................................................................................2311.001000
............................................................................ATAGTAGACCGTATAGCGTACGC...............................................................................................2311.001000
.................................................................................................................ATGTAACACGGTCCACTAACA............................................................2111.001000
.................................................................................................................ATGTAACACGGTCCACT................................................................1711.001000
.............................................................................TAGTAGACCGTATAGCGTACAA...............................................................................................2211.001000
................................................................................................................TATGTAACACGGTCCACTAACT............................................................2221.002000
............................................................................ATAGTAGACCGTATAGCT....................................................................................................1820.501000
speTri2
CG-----GAGGCCTTTCTGGACGTG----TCCTCGGTCCTTGTCCTCGGCGGCGTCTCTGTGTGGTACTCGGAGAGATAGTAGACCGTATAGCGTACGCTTTATCTGTGACGTATGTAACACGGTCCACTAACCCTCAGTATCAAATCCATCCCCGAGGCTCCTGGAAACGCCGCTGTCTTCGGGGAGGCGCCASizeHit CountTotal NormTotal
No Reads

Generated: 06/17/2015 at 02:22 PM