ID:

mmu-mir-410

 Coordinate:

chr12:109743715-109743795 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-34.0 -33.3

Sense Strand Reads

GGACAGCTTCAGGTGGTGATTCCAGCTCCAGGGTTGCTGCGGTCAACACTGGGTACTTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAATACCACCTGCCACTCCGGTCACTCGGCAGTACATACCAGGTGTCACACCACTGCC
*************************************************..((((.(((((((.((((((((((((.((.(((((.((.......))))))).)).)))))))))))).))))))))))).....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR391845
embryo		 SRR391846
embryo		 SRR391847
embryo		 SRR391852
embryo		 SRR391851
embryo		 SRR391853
embryo		 SRR391848
embryo		 SRR206942
brain		 SRR553582
brain		 GSM510444
brain		 SRR390298
fibroblast		 SRR391849
embryo		 SRR206940
brain		 SRR206941
brain		 SRR038744
brain		 SRR391850
embryo		 SRR037921
embryo		 SRR037920
embryo		 SRR040488
liver		 SRR553583
cerebellum		 SRR206939
brain		 SRR345203
brain		 SRR553602
sertoli_cells		 SRR1509750
spermatogonia		 SRR037906
brain		 SRR390297
fibroblast		 SRR345202
brain		 SRR039610
brain		 SRR039185
fibroblast		 SRR039184
fibroblast		 SRR038741
brain		 SRR037905
brain		 SRR345199
brain		 SRR039183
fibroblast		 SRR345201
brain		 SRR345207
brain		 SRR039186
fibroblast		 SRR037922
embryo		 SRR345197
brain		 SRR345198
brain		 SRR248526
Thy1-_somatic_testes_cells		 SRR345206
brain		 SRR042475
fibroblast		 SRR345204
brain		 SRR042477
brain		 SRR1509751
foetal_primordial_germ_cells		 SRR345205
brain		 SRR037907
brain		 SRR037919
embryo		 SRR042471
spleen		 SRR1509749
zygote		 SRR248525
Thy1-_somatic_testes_cells		 SRR345200
brain		 SRR037904
brain		 SRR248524
Thy1+_spermatogonia		 SRR553584
heart		 SRR060845
brain		 GSM317181
brain		 SRR248523
Thy1+_spermatogonia		 SRR345196
brain		 SRR037924
embryo		 SRR037925
embryo		 SRR037929
embryo		 SRR042462
bone marrow		 SRR037928
embryo		 SRR042483
muscle		 SRR069809
Type_A_spermatogonia		 GSM475281
testes		 SRR073955
blood		 SRR116846
epididymis		 SRR014234
ovary		 SRR1509747
oocyte		 SRR032477
uterus		 SRR248527
spermatogonia		 SRR073954
blood		 SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		 SRR051940
testes		 SRR032476
uterus		 SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		 SRR042463
spleen		 SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		 SRR037923
embryo		 SRR037926
embryo		 SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		 SRR037930
embryo		 SRR037927
embryo		 SRR042484
salivary gland		 SRR065058
pancreas		 SRR1647954
Dicer_cKO_pachytene_spermatocytes		 SRR037901
testes		 SRR553604
spermatocytes		 SRR077866
liver		 SRR1509748
spermatozoa		 SRR1647953
Dicer_WT_pachytene_spermatocytes		 SRR042486
ovary		 SRR042481
pancreas		 SRR014231
testes		 SRR069810
pachytene_spermatocytes		 SRR039153
muscle		 SRR1647951
Dgcr8_WT_pachytene_spermatocytes		 SRR553586
testes		 SRR553603
spermatids		 GSM509279
testes		 SRR037898
ovary		 SRR037897
ovary		 SRR037902
testes		 SRR065059
pancreas		 SRR095855BC5
heart		 GSM566419
fibroblast		 GSM509275
testes		 SRR037903
testes		 SRR039154
muscle		 SRR065050
liver		 SRR065056
jejunum		 SRR069811
round_spermatid		 SRR553585
kidney		 SRR095855BC7
heart		 SRR014236
testes		 SRR042473
lymph		 SRR039152
muscle		 GSM317182
brain		 SRR014235
testes		 SRR042482
skin		 SRR065045
liver		 SRR525237
Blood		 GSM566420
fibroblast		 SRR037900
testes		 SRR042478
lung		 SRR065047
liver		 SRR1647952
Dgcr8_cKO_pachytene_spermatocytes		 SRR077864
liver		 SRR037899
ovary		 SRR042479
liver		 SRR042485
testes		 SRR065048
liver		 SRR065055
jejunum		 SRR042467
spleen		 SRR042470
lymph		 SRR042476
heart		 SRR042487
spleen		 SRR051939
testes		 SRR065046
liver		 SRR065049
liver		 SRR069834
blood		 SRR077865
liver		 SRR095855BC2
heart		 SRR095855BC4
heart		 SRR095855BC6
heart		 SRR095855BC8
heart		 SRR095855BC9
heart
...................................................................................................AATATAACACAGATGGCCTGT............................................................. 21 0 1 347064.00 347064 63911 51930 51320 26865 16200 11050 9366 9039 7706 7600 2470 7084 5793 5644 5465 4992 4614 3953 4317 3020 3009 2832 2269 0 2345 986 2374 2264 2043 2031 2182 1891 1567 1543 1396 1546 986 1323 1148 1088 986 1261 804 1055 673 0 780 576 616 62 0 288 235 326 252 246 186 206 118 72 87 83 90 71 78 17 58 57 44 35 30 0 18 32 26 30 20 16 26 11 22 20 14 24 18 14 3 15 17 14 7 10 0 15 5 4 2 12 11 8 5 8 1 9 5 6 4 5 1 1 6 3 1 5 4 3 4 0 0 3 0 0 3 0 0 1 2 2 2 3 1 2 0 0 0 2 0 0 0 0 0 0 0 1 1 0 1 0 0 1
...................................................................................................AATATAACACAGATGGCCTGTAA........................................................... 23 2 1 10038.00 10038 2347 1953 2055 533 348 242 330 28 56 101 0 233 70 22 21 173 92 81 27 23 38 146 71 0 31 176 28 9 9 5 5 28 3 9 3 53 4 20 4 6 17 12 190 50 132 0 33 6 10 61 0 6 0 5 6 2 29 0 3 0 5 7 3 8 1 6 13 2 3 0 0 0 2 1 0 0 6 3 0 6 0 1 0 0 0 0 4 0 0 2 0 1 0 0 1 5 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 4 1 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTA............................................................ 22 1 1 8622.00 8622 1183 883 1062 745 482 368 273 116 293 181 0 178 311 114 132 114 162 128 42 89 160 105 162 10 63 129 83 49 8 8 54 60 10 6 22 40 5 41 22 17 123 36 81 32 122 1 43 20 15 21 5 33 0 5 25 13 45 0 19 1 9 4 2 8 5 1 2 2 1 1 0 1 3 1 2 0 5 7 0 3 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTG.............................................................. 20 0 1 8009.00 8009 2212 1831 1775 266 154 90 171 71 32 187 0 126 20 49 54 103 78 62 17 25 22 41 16 0 52 19 37 20 12 5 15 38 27 4 29 29 1 31 33 58 6 18 13 7 3 0 15 20 12 12 0 8 4 6 8 0 2 1 3 17 5 2 1 1 4 1 3 2 0 0 0 0 0 1 0 2 1 1 5 0 4 1 1 2 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGGTTGTCTGTGATGAGTTCG................................................................................................ 21 0 1 6831.00 6831 69 67 52 234 152 215 134 7 120 6 3143 54 30 6 26 52 35 7 19 34 22 3 107 0 3 418 6 11 306 287 19 0 0 236 14 0 554 9 6 0 215 0 10 13 0 0 9 0 4 0 0 21 0 0 29 1 1 2 30 1 2 15 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 4 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTT............................................................ 22 0 1 6492.00 6492 1286 1110 1066 522 339 232 194 101 82 166 0 156 64 48 105 92 158 121 23 18 45 15 31 0 60 26 19 55 15 12 43 31 0 14 15 12 8 46 8 1 29 2 12 3 9 0 8 11 11 0 0 18 0 4 8 2 3 4 2 0 2 1 0 2 7 0 1 2 0 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CAACACTGGGTACTTGAGGAG..................................................................................................................... 21 0 1 5062.00 5062 13 27 26 700 675 490 52 0 31 9 1596 23 9 0 1 17 22 20 12 98 2 0 56 0 0 581 5 0 74 60 0 3 3 54 15 10 83 2 5 0 28 2 102 8 14 0 8 1 4 11 0 3 0 0 6 0 18 0 10 0 6 4 0 7 1 2 0 1 0 1 3 0 8 0 0 0 0 1 0 6 0 1 3 0 0 0 3 1 1 0 5 0 0 0 2 1 0 1 0 0 2 0 1 0 0 1 3 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................AATATAACACAGATGGCCTGA............................................................. 21 1 1 4206.00 4206 140 99 108 61 26 20 32 520 333 506 0 12 266 398 51 9 4 12 6 299 210 83 7 0 159 14 91 42 1 2 28 109 33 4 52 80 1 2 22 53 10 55 9 33 61 0 31 32 1 0 0 7 13 19 2 11 0 0 2 1 0 0 0 0 1 1 0 4 0 5 1 0 1 0 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTATC.......................................................... 24 2 1 3968.00 3968 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 2663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 800 0 0 0 1 442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTAT........................................................... 23 1 1 3639.00 3639 862 633 606 135 83 65 86 89 82 32 0 62 80 66 70 33 27 40 9 24 30 23 77 7 14 53 2 28 4 1 29 5 0 3 0 5 1 9 0 0 76 2 32 6 35 0 15 1 3 13 0 20 0 0 9 2 14 0 17 0 0 0 0 1 0 1 3 0 1 2 0 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................AACACTGGGTACTTGAGGAG..................................................................................................................... 20 0 1 2619.00 2619 6 6 10 235 225 173 44 0 14 1 1347 14 3 0 0 17 13 11 2 37 3 0 41 0 0 141 6 2 38 33 0 0 11 30 0 5 53 2 0 9 11 2 25 8 0 0 4 0 0 2 0 3 0 1 2 0 2 0 7 0 1 2 0 0 2 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATAACACAGATGGCCTGT............................................................. 18 0 1 1899.00 1899 539 220 433 21 23 20 56 0 2 154 0 28 0 0 2 43 84 93 9 0 0 0 0 0 45 0 0 4 6 7 0 34 0 1 0 0 1 35 0 0 1 0 0 0 0 0 0 12 13 0 0 0 0 2 0 0 0 0 2 0 2 0 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGC............................................................. 21 1 1 1881.00 1881 176 169 185 24 13 15 4 122 61 187 1 6 48 72 31 1 13 19 14 18 42 30 12 0 58 1 44 15 1 4 7 55 82 2 82 35 1 4 35 45 1 18 2 17 23 0 15 13 4 0 0 4 22 14 0 8 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATATAACACAGATGGCCTGT............................................................. 20 0 1 1491.00 1491 265 158 221 53 21 23 50 0 12 154 0 84 3 0 9 73 85 65 3 1 4 0 25 0 45 0 0 13 3 2 6 44 0 2 0 0 0 25 0 0 2 0 0 0 1 0 0 8 10 0 0 0 0 11 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTT........................................................... 23 0 1 1327.00 1327 301 253 235 40 31 29 35 31 37 12 0 18 27 21 60 10 11 7 0 4 13 0 18 0 10 7 0 21 0 0 29 7 0 0 0 4 1 2 0 0 18 0 8 1 6 0 1 2 1 0 0 6 0 1 2 1 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCT............................................................... 19 0 1 1297.00 1297 144 98 124 40 17 12 25 29 15 12 0 8 35 14 33 4 7 4 2 7 13 14 14 0 6 0 15 8 1 7 13 5 1 3 6 10 1 2 27 12 6 7 10 5 2 0 5 0 0 360 0 3 0 1 0 0 7 0 1 25 0 0 0 0 0 56 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................TATATAACACAGATGGCCTGT............................................................. 21 1 1 1030.00 1030 456 174 30 80 51 18 0 1 31 6 7 1 3 1 1 0 18 8 11 4 7 14 0 0 14 1 12 1 2 1 1 6 10 0 15 6 2 3 15 5 0 1 0 3 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CAATATAACACAGATGGCCTGT............................................................. 22 1 1 1013.00 1013 324 248 301 16 12 10 23 0 0 20 0 17 0 1 2 9 4 5 0 0 1 0 0 0 6 3 0 0 0 0 0 4 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGCTGGCCTGT............................................................. 21 1 1 930.00 930 121 238 281 37 25 15 1 7 1 22 2 2 1 0 0 0 14 2 7 10 52 12 1 0 4 2 12 1 1 1 1 8 1 3 0 7 1 6 5 5 0 2 1 4 0 0 3 3 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCAACACTGGGTACTTGAGGAG..................................................................................................................... 22 0 1 880.00 880 2 8 3 179 190 142 17 0 7 0 0 6 3 1 0 7 11 5 3 15 0 0 16 0 0 142 2 0 18 15 0 2 0 20 0 3 25 4 0 0 2 0 5 5 0 0 2 0 0 3 0 2 0 0 2 0 0 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................CATATAACACAGATGGCCTGT............................................................. 21 1 1 860.00 860 331 266 65 31 30 18 1 2 6 16 2 0 8 7 3 1 8 5 13 4 10 4 0 0 2 3 3 0 1 0 1 1 3 0 0 1 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTA........................................................... 23 1 1 844.00 844 191 192 196 56 31 25 36 1 0 11 0 16 1 0 1 20 14 13 9 1 2 2 0 0 0 0 0 1 1 0 0 4 0 0 0 2 1 2 0 0 0 0 7 0 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGACGGCCTGT............................................................. 21 1 1 820.00 820 80 310 87 11 8 9 2 9 7 36 2 2 4 12 4 1 13 17 12 1 3 16 2 0 8 5 11 3 2 2 1 3 32 5 17 6 0 6 18 26 0 2 4 4 2 0 4 2 1 0 0 0 5 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACATATGGCCTGT............................................................. 21 1 1 805.00 805 32 10 10 18 9 8 1 11 313 3 0 4 5 6 3 3 1 4 18 112 18 5 183 0 1 1 2 1 2 0 0 0 2 0 0 2 0 2 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 2 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTATA.......................................................... 24 2 1 789.00 789 12 7 7 6 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 5 471 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 185 0 0 0 0 83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCC................................................................ 18 0 1 771.00 771 216 171 182 18 10 13 22 10 0 4 0 18 1 1 6 14 5 8 2 1 0 3 0 1 2 0 10 7 2 2 0 2 1 2 5 9 0 1 2 1 0 0 0 5 0 0 0 0 0 10 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCCGT............................................................. 21 1 1 756.00 756 143 95 50 13 11 6 3 4 1 11 1 4 5 7 2 1 5 10 8 1 3 7 1 0 2 1 6 2 4 2 1 1 71 3 58 5 1 2 93 82 1 1 1 4 0 0 1 0 0 0 0 1 18 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TATAACACAGATGGCCTGT............................................................. 19 0 1 670.00 670 172 127 123 10 5 2 12 1 5 41 0 10 5 4 13 11 18 23 4 2 1 0 0 0 11 0 1 7 0 3 1 14 0 2 0 1 0 10 0 1 0 2 0 0 0 0 0 4 2 0 0 0 5 4 0 1 0 0 0 9 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACCCAGATGGCCTGT............................................................. 21 1 1 659.00 659 63 412 77 10 5 4 0 7 0 2 1 0 2 1 0 1 4 2 5 3 2 7 0 0 3 0 3 19 1 3 0 1 0 2 2 2 0 2 0 0 0 1 0 1 0 0 1 5 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACACATGGCCTGT............................................................. 21 1 1 656.00 656 139 64 90 40 28 20 25 8 41 1 2 18 0 4 1 7 4 4 7 24 3 3 26 0 2 1 3 2 0 1 1 2 18 1 12 1 0 2 24 18 0 1 0 0 0 0 0 0 1 0 0 0 2 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACACTGGGTACTTGAGGAG..................................................................................................................... 19 0 1 655.00 655 6 5 6 117 111 79 31 0 8 0 0 9 1 0 1 4 2 5 0 10 1 0 7 0 0 88 1 0 31 18 0 1 5 16 5 1 30 3 2 25 3 1 4 0 0 0 1 0 0 1 0 0 3 0 1 0 2 0 0 6 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GATATAACACAGATGGCCTGT............................................................. 21 1 1 638.00 638 188 155 107 36 20 10 5 3 4 3 0 6 11 5 4 5 4 1 12 1 9 2 2 0 6 2 1 1 4 0 0 2 1 3 2 3 1 3 3 4 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGTCCTGT............................................................. 21 1 1 614.00 614 35 10 12 21 16 7 4 15 112 18 0 4 88 13 1 2 13 2 27 5 90 7 1 0 0 0 10 3 1 5 1 0 17 0 12 1 4 2 11 3 0 2 1 4 18 0 0 4 0 0 0 0 4 0 0 1 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTAAT.......................................................... 24 2 1 532.00 532 84 87 62 48 33 28 11 7 13 3 0 11 8 7 8 2 6 3 2 6 3 3 63 0 0 0 0 3 1 0 2 1 0 1 0 0 0 2 0 0 12 0 2 0 0 0 0 0 1 0 0 2 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
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................................................................AGGTCGTCTGTGATGAGTTCG................................................................................................ 21 1 1 8.00 8 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ACGAATATAACACAGATGGCCTGT............................................................. 24 0 1 8.00 8 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTACA.......................................................... 24 3 3 8.00 24 7 1 7 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCTATAACACAGATGGCCTGT............................................................. 21 2 5 7.80 39 33 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGTCCTGTA............................................................ 22 2 4 7.75 31 0 1 0 2 1 0 0 0 6 0 0 1 7 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CCTGTCGAAGTCCACCACTAAGGTCGAGGTCCCAACGACGCCAGTTGTGACCCATGAACTCCTCTCCAACAGACACTACTCAAGCGAAATAATTACTGCTTATATTGTGTCTACCGGACAAAAGTTATGGTGGACGGTGAGGCCAGTGAGCCGTCATGTATGGTCCACAGTGTGGTGACGG
**********************************************..((((.(((((((.((((((((((((.((.(((((.((.......))))))).)).)))))))))))).))))))))))).....************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM361408
brain		 GSM361407
brain		 GSM361415
brain		 GSM361430
brain		 GSM361394
brain		 GSM361398
brain		 GSM361399
brain		 SRR345200
brain		 GSM361395
brain		 GSM361402
brain		 SRR1509750
spermatogonia		 SRR345201
brain		 SRR391846
embryo		 SRR345198
brain		 SRR391848
embryo		 SRR039153
muscle		 SRR345199
brain
................................................................TCCAACAGACACTACTCAAGC................................................................................................ 21 0 1 25.00 25 4 6 6 4 0 3 0 0 1 1 0 0 0 0 0 0 0
...................................................................................................TTATATTGTGTCTACCGGACA............................................................. 21 0 1 22.00 22 12 2 2 2 2 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTATATTGTGTCTACCGGACC............................................................. 21 1 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTATATTGTGTCTACCGGACAA............................................................ 22 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................AGTTGTGACCCATGAACTCCTC..................................................................................................................... 22 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTATATTGTGTCTACCGGACAT............................................................ 22 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCCACAGACACTACTCAAGC................................................................................................ 21 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TTGTGACCCATGAACTCCTC..................................................................................................................... 20 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................TACAACAGACACTACTCAAGC................................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTATATTGTGTCTACCGGACATT........................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTATCTTGTGTCTACCGGACA............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CCAACGACGCCTGTTGCGTCCCATGA............................................................................................................................ 26 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....TCGATGTCCACCACTAAGGT............................................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................TTATATTGTGTCTACCGGAC.............................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCAAAAGACACTACTCAAGC................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ATATTGTGTCTACCGGACAAA........................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTATATTTTGCCTACCGGACA............................................................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TCTATTTATATTGTGTCTACCGGACA............................................................. 26 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AGATATGTTGGACGCTGAGGC...................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................GACGGTTAGGCCAGTG................................. 16 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................GCCATCATGTATGGTCAGCA............ 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................CTCCTGGCCAACAGACACT........................................................................................................ 19 2 15 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................CCAACGACGCCGGTTG...................................................................................................................................... 16 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................CCAGACACAACTCAAGCGA.............................................................................................. 19 2 18 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................TATTCCTCGCCAACAGACACT........................................................................................................ 21 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................AGGCTCCAACGACGCCA.......................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................GTCGTGTGTGGTCCACAGTG......... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................GCAGACTCTACTCAAGCGC.............................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................GGCTGCTTATATTGTATCTA.................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr12:109743665-109743845 + mmu-mir-410 GGACAGCTTCAGGTGGTG-ATTC---CAGCTCCAGG-----------GTTGCTGCG------GT-----C------AACAC--TGGGTACTTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAATACCACCTGCCACTCCGGTCACT--CGGCAG-TACA-TACCAGGTGTCACACCACTGCC
cavPor3 scaffold_111:1117581-1117751 + GGACCGCTCCGGAAGGCA-ATGC---CAGCACCACG-----------GCGACCACG------GTCCTGGCTTCAGCGTCAC--TCGGTACCTGAAGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTCTTCAGTACTGCCTTGCCCGC-----------GGCAGAGCGCC--------------GGCCAGCC
dipOrd1 Unknown GGGCAGCGGCAGGAGGTG-GCAC---CAGGCCCACA-----------GAGGCTGCG------GC-----C------TCCTC--TGGGTACCTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACCACCTATccccg-----------ggcgg-gggcc-gcc--gcg---ccccAGCGCC
hetGal2 Unknown ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_7053:51591-51752 + AGGCGACGCCGGGTGCCA-A--------------GGGATGCCCCCAACAGGCTGCA------G-----GCAGCAGCGTGGC--TGTGGCGCTGAGGAGAGGTTGTCTGTGATGAGTTCGCTGTATTAATGTCGAATATAACACAGATGGCCTGTTTTCGGCACCGCCTTGCCCTC-----------GGC-----GCC------G-----CGC--CAGCG
oryCun2 chrUn0352:153110-153279 + GGGCGCCTCCAGGCCACA-GGGACGTCGC-----GG-----------GACGCCGCTGTGGAG-AACTCGTGTCAGCGTCGCTGTGGGTG-CTGAGGGGAGGTTGTCTGTGATGAGTTCGCTGTATTAAAGCCGAATATAACACAGATGGCCTGTTTTCAGCACCGCCTAGCGCTC-----------GGC-----GCC--------------CCGCGGCA
rn5 chr6:143056299-143056480 + rno-mir-410 GGACAGCTTCAGGTGGTGAATTC---CAGCCCCAGG-----------GGTGCTCCG------GT-----C------AACAC--TGGGTACTTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAATACCACCTGCCACTCCTGTCACT--TGGCAG-TACA-TGCCAGGTGTCACAGCACTGCC
speTri2 JH393414:4809745-4809925 + GGGCG-CCCGAGGAGGCA-GCAC---CAG-----CG-----------GAGGCCACGGTCGAGGTCCTTGTGCCAGCATCACTGTGGGTACCTGAGGAGAGGTTGTCTGTGAAGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACCACCTCCCACTC---TCAGCGTGCGCGG-GCGCA------G-------CCAGTGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
GGACAGCTTCAGGTGGTG-ATTC---CAGCTCCAGG-----------GTTGCTGCG------GT-----C------AACAC--TGGGTACTTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAATACCACCTGCCACTCCGGTCACT--CGGCAG-TACA-TACCAGGTGTCACACCACTGCCSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
Type_A_spermatogonia		SRR069810
pachytene_spermatocytes		SRR069811
round_spermatid		SRR248523
Thy1+_spermatogonia		SRR248524
Thy1+_spermatogonia		SRR248525
Thy1-_somatic_testes_cells		SRR248526
Thy1-_somatic_testes_cells		SRR248527
spermatogonia		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
sertoli_cells		SRR553603
spermatids		SRR553604
spermatocytes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus		SRR1509747
oocyte		SRR1509748
spermatozoa		SRR1509749
zygote		SRR1509750
spermatogonia		SRR1509751
foetal_primordial_germ_cells		SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		SRR1647951
Dgcr8_WT_pachytene_spermatocytes		SRR1647952
Dgcr8_cKO_pachytene_spermatocytes		SRR1647953
Dicer_WT_pachytene_spermatocytes		SRR1647954
Dicer_cKO_pachytene_spermatocytes
.....................................................................................................................................AATATAACACAGATGGCCTGT.................................................................211347064.00347064000126440000071206000000000076003261891234557621825465226467318630095793564490397211481088156723513962374283210557801261154661639534614132320878314147890186391151930513209366708449921620026865110503511154320312043986804986247030000001504010002504317000200111102000003113173005925415431100062000000057112000214660020581241182522889863200000007706302024632269875000016180000026243022831517
.....................................................................................................................................AATATAACACAGATGGCCTGTAA...............................................................23110038.00100380000030000080000000000010152831652191322938702228046303281465033125310819220157001302347195320553302331733485332420009594190176040000000000000000102712000040010000020016000001501060006100000002000000020000613103661710000000562320710000000320000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTA................................................................2218622.00862200002100000800000000000181560632054132491224516031111411612217100228310532433640151281624109410520118388310622731781144827453681006885811290200001000000000000042100001000100000001110010011000300021000000020000000000005201192533123100000002938913016210100007310510100000000
.....................................................................................................................................AATATAACACAGATGGCCTG..................................................................2018009.008009000000000001100000000001876385220155420322220497117335827429374171518291262783115211411221218311775171126103154266900004512113190000000000000000000017000000000000000000010000000000000012000000021100000000001300388610000000322500160000000100000052240010
..................................................................................................AGGTTGTCTGTGATGAGTTCG....................................................................................................2116831.00683100000000000020000000000600301926110122306716000146313900473593215420206967521345452152234215010236287306554104183143000000000000000000019000000000000000000001000000000000000000000011000000000000003029212150000000012034101070000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTT................................................................2216492.0064920000100000024000000000016643160114310555934564481010810015191538212111211584602102700128611101066194156923395222320111412158122600000000000000000000230000100001000000000000000000000000000000002010000000000010028182910000000821820310000000020000000100000
.....................................................................C------AACAC--TGGGTACTTGAGGAG.........................................................................................................................2115062.005062000000000007000000000009030101014182900050301550882104202221643010013272652231767570049010054607483102581159630000000010000000001202000000001000010002300002113060001100000001110000001010001010632800000000319801560520000180000000000001
.....................................................................................................................................AATATAACACAGATGGCCTGA.................................................................2114206.0042060000100000000000000000050619109159322851426102102663985201225333135291833331558011242000001001409910832129266120500421191400000000000000000010600000001020000000001101000000000000000000040000000000000000227100000000033329911070000000210000000111000
............................................................................AACAC--TGGGTACTTGAGGAG.........................................................................................................................2012619.002619000000000000000000000001100000202330000911006084250111320120020066104414172252351730103033385325141134710000000000000000002000000000000000000001000000300100120000000001000000000010007231110000000143701410300000000000000000000
........................................................................................................................................ATAACACAGATGGCCTGT.................................................................1811899.001899000000000000000000000001542344512024000000000000000000139384350200013053922043356284323212000017610000000000000000000000900000000000000000000000000000000000000000020000000100000000200100000000200000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGC.................................................................2111881.0018810000000000000000000000018714555813731152304248721220354582228244301715183541913401000010176169185461132415000241121100000000000000000001400000000000000000000100000000010000000000010000000000001000004100000000611880120000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGT.................................................................2011491.001491000000000000200000000001541144458691310430000000000000010658525000021102651582215084732153230002230000000000002010000000030000000000000000000000010000000000000000000000000000000000000020000000012100250000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTT...............................................................2311327.0013270000000000000000000000012171022960216113272131000000001104171120100000030125323535181031402901000018700000000000000000000000000000000000000000001000000000000000000000000000000000000226180000000037410180000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCT...................................................................1911297.0012970000000000000000000000012156013338271335142925271210615145571004720000000014498124258417401200037111000700000000000000000020000101000000102010560000000000000036010000001000000000000040210360000000015700140000000000000000000000
...............................................................T-----C------AACAC--TGGGTACTTGAGGAG.........................................................................................................................221880.008800000000000000000000000000200000000310000000205203051140220000028317671901791421002015182551420000000000000000000030000000001000000000000000000010000300000000110000000001000002220000000071500160100000020000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTA...............................................................231844.00844000000000000000000000001104010112021010000000201021131420010010019119219636162031562500000117000000000000000000000900000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCC....................................................................181771.00771000000000000000000000004022006700011100211051035009085100000010216171182221814101813100222000000000000000000000002000000000000000000000000000000000010000000000000000000000000002000000000010000000000000001000000000
.......................................................................................................................................TATAACACAGATGGCCTGT.................................................................191670.0067000000000000001000000000414141141137001541901050100021223181000000000172127123121011510200023000000000000000000000000400000000000000000000000000000000000000000010000000000000000000000000000521000100000000000000000000
.............................................................................ACAC--TGGGTACTTGAGGAG.........................................................................................................................191655.006550000000000000000000000000100010021100622553510011105230010001065631941111177900016183130488000000000000000000000000000000000000000001000000000000010000000000000010000000000103000000008100070000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTAG...............................................................235472.60236300000000000310000000000802019143396365614310000001718020320000001002251621601461336920848616700035856513000000000000000000001500000001000000000000000001100000001000000000000000000000000181019200000006018101190000000120000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGG.................................................................211471.0047100000000000000000000000110351490102513212138226121910131711016301000010598575011442000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000101000000001340010000000010000000000010
.....................................................................................................................................AATATAACACAGATGGCCTGTAC...............................................................231385.003850000100000010000000000020000110100110000000330101145400000000868853616823372800000002200000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000030000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGTTT...............................................................221301.003010000000000000000000000073160171913103965000000531303001100000000664438404134000002100000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000001604040000000000000000000000
..............................................................GT-----C------AACAC--TGGGTACTTGAGGAG.........................................................................................................................231296.0029600000000000000000000000000000210001000000000000000010000000003127506767670003312218000000000000000000001000000000000000000000000001000000000000000011100000000000001007100000007810130000000000000000000000
..................................................................................................AGGTTGTCTGTGATGAGTTC.....................................................................................................201255.002550000000000000000000000000001000010100162939740210011100100000055111234200013201318180000000000000000000001000000000000000000000000000000000010000000000100000000000000101800000000200020000000000000000000000
.....................................................................................................................................AATATAACACAGATGGC.....................................................................173222.3366700000000000000000000000000004131000113010000101202000000000000234198171731121000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000002000120000000000004000000000
.......................................................................................................................................TATAACACAGATGGCCTGTTT...............................................................211212.002120000000000000000000000013147056121010132317050015104152001010000000081122000000001000000000000000000000000010000000000000000000000000000000000000000001000000000000000000020000000027100000000000000000000000000
..............................................................................CAC--TGGGTACTTGAGGAG.........................................................................................................................181191.00191000000000000000000000000000000001010048700000011101300000000001061132261600091122101700000000000000000000000000000000000000000000000000000001000000000000000000000000010100000000780110000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTAA..............................................................241169.00169000000000000000000000000000000010000000000000000004300000000037494642397100000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000
......................................................CG------GT-----C------AACAC--TGGGTACTTGAGGAG.........................................................................................................................251163.00163000000000001000000000001002000140010000000000000000210000000001000062017000100134200000000000000000000000100000000000000000000001000000005000000001130000000000000000400000000102010110010000000000000000000
....................................................................................................................................GAATATAACACAGATGGCCTGT.................................................................221158.00158000000000000000000000004022003520133040000072200201100000000026363121052400020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000130000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTTT..............................................................241134.0013400000000000000000000000001009771020130000000000000001000000002715151213430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051000000013110100000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTT..................................................................202131.5026300000000000000000000000301000100001000010025730530010000000003252618181625642000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000130010000000000000000000000
..................................................................................................AGGTTGTCTGTGATGAGTT......................................................................................................191129.001290000000000000000000000000000000000010003430000100000000000000010000011000030610000000000000000000001000000000000000000031000000000000097000000000000000000000000000200000000000000000000000000000000000
.......................................................G------GT-----C------AACAC--TGGGTACTTGAGGAG.........................................................................................................................241117.00117000000000000000000000000010001010020000000000000000000000000012171436202100002031700000000000000000000400000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTAAC..............................................................241116.0011600000000000000000000000000000000000000000000000000100000000006101154223221800000000000000000000000000000000000000000000000000000000000000001000000000000000000000000002000000000200080000000001000000000000
..................................................................................................AGGTTGTCTGTGATGAGTTCGT...................................................................................................221104.0010400000000000000000000000001101000000000000001300000211000000004215314640009713231000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000200020000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTAAA..............................................................247101.4371000000000000100000000000201001106231143001100030000099101200000138114107201833457380001010162400000000000000000000500000000000000000000000000000010004000000000010000000000100201160000000010220320000000000000000000000
..................................................................................................AGGTTGTCTGTGATGAGT.......................................................................................................181101.0010100000000000000000000000000000000000000000303011120010000000002099215042000111240100000000000000000000100000000000000000000000000000000006000000000000000000000000000100000000432010000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTG................................................................22191.0091000000000000000000000002020003000111000000000000003810000000002310121231400000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000100000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTC................................................................22178.007800000000000000000000000100001100020015001001000000210000000001416935014100031100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000001000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTG...............................................................23165.00650000000000000000000000000100100000000000000000010101000000000149243146200020621000000000000000000000300000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................ATAACACAGATGGCCTG..................................................................17163.006300000000000000000000000000000000000000000000000000000000000002892211110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TAACACAGATGGCCTGT.................................................................17258.00116000000000000000000000000000010100001100000000000000000000000043213061700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300010000000000000000000000
...................................................................................................................................CGAATATAACACAGATGGCCTGT.................................................................23157.0057000000000000000000000002000017801012200000012000000010000000060420067000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120010000000000000000000000
..................................................................................................AGGTTGTCTGTGATGAGTTCGCTTT................................................................................................25156.005600000000000000000000000000000000000000000000000000000000000001001514171000000000000000000000000000000100000000000000000000000000000000000000000000074500000000000000000000000000000000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGTA................................................................21156.0056000000000000000000000004001000010100000000013022201310000000073454101200000001000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000040000000000000000000000
.......................................................................................................................................TATAACACAGATGGCCTGTTTT..............................................................22155.00550000000000000000000000010100127002313000000030000000000000000312110001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011000000000000000000000000
........................................................................................................................................ATAACACAGATGGCCTGTT................................................................19152.005200000000000000000000000311110000000000000000000000342000000001410810101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTAAG..............................................................24343.3313000000000000000000000000000100001022100000000100000020000000002617131439213000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112000000001200160000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTG..................................................................19143.00430000000000000000000000041111000000000000000000000002000000000108422301100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTC...............................................................23143.004300000000000000000000000001100001000000000000000000010000000007131110121000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGTT................................................................21142.004200000000000000000000000302101100000000000000000000140000000001151200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATAACACAGATGGCCTGTT................................................................20137.0037000000000000010000000007013101000023000000002000001000000000052500000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGAA................................................................22332.3397000000000000000000000001503400105132120000011401100010000000011031032216000000001000000000000000000000000000000000000000000001001000000000000000010000000000000000000000000000180000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTGA...............................................................23131.0031000000000000000000000000001000000030000000000000000000000000034630123400000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGCA................................................................22225.5051000000000000000000000006021200010223100010003030201200000000036401001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000020000000000000000000000
........................................................................................................................................ATAACACAGATGGCCTGTTT...............................................................20125.0025000000000000000000000002002003100002000000000000001000000000065100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTA..................................................................20124.00240000000000000000000000000011000000000001001000000000000000000410210010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................................................................................................................................AATATAACACAGATGG......................................................................16723.57165000000000000000000000000000000000000000000000000000000000000058465222000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000100010000000000000000000000
..................................................................................................AGGTTGTCTGTGATGAGTTCGA...................................................................................................22123.0023000000000000000000000001000000000000001000100000010000000000010100101000041250000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTTA..............................................................24123.0023000000000000000000000000000000000010000000000000000000000000016822011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................C------AACAC--TGGGTACTTGAGGAGATC......................................................................................................................24122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017500000000
.....................................................................................................................................AATATAACACAGATGGCCTGTCA...............................................................23221.50430000000000000000000000000000000000010000000012000000000000000128820012200010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................AGGTTGTCTGTGATGAGTTCGCT..................................................................................................23121.00210000000000000000000000000010000000000000000000000000000000000000000000000000001800000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTGA..............................................................24120.00200000000000000000000000000000000000000000000000000000000000000103111002000000010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATAACACAGATGGCCTG..................................................................18120.0020000000000000010000000003000000000000000000000000000000000000085300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGA.................................................................20118.0018000000000000000000000008110200000000000000000000000000000000012201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATAACACAGATGGCCTGTA................................................................19218.003600000000000000000000000301100000000000000000000000000000000001261002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGTTA...............................................................22118.0018000000000000000000000000000000000000000000002000000010000010023501110000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TTGTCTGTGATGAGTTCG....................................................................................................18117.0017000000000000000000000000000000000000000000000000000000000000000000000000043550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................C------AACAC--TGGGTACTTGAGGA..........................................................................................................................20116.0016000000000000000000000000000000000000000000010000010100000000000000000100000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000100000000130030100000000000000000000
.....................................................GCG------GT-----C------AACAC--TGGGTACTTGAGGAG.........................................................................................................................26115.0015000000000000000000000000000000000020000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000261020000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGTTTT..............................................................23115.0015000000000000000000000000000024000000000000000000000000000000020100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100040000000000000000000000
...................................................................................................GGTTGTCTGTGATGAGTTCG....................................................................................................20114.0014000000000000010000000000000011000001000000000000000000000001100000010100002300000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATAACACAGATGGCCTGTA................................................................20114.0014000000000000000000000001000010000000000000000000000000000000022500000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000200000000000000000000000000
................................................................................................................................TGACGAATATAACACAGATGGCCT...................................................................24114.0014000000000000000000000000000002110222200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTAG..............................................................24114.0014000000000000000000000000000000000000000000000000000000000000030310023100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
................................................................................................................................TGACGAATATAACACAGATGGC.....................................................................22114.0014000000000000000000000000000001000122600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................TATAACACAGATGGCCTGTTA...............................................................21114.0014000000000000000000000004000001000000000000000000000000000000012500000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AACACAGATGGCCTGT.................................................................16413.5054000000000000000000000000000000000000000000000000000000000000015141821210100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GAATATAACACAGATGGCCTGA.................................................................22113.0013000000000000000000000002000000100152100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................C------AACAC--TGGGTACTTGAGG...........................................................................................................................19113.0013000000000000000000000000000000000000000000000000000000000000000000000000032130000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000020000000000000000000000
..................................................................................................AGGTTGTCTGTGATGAGTTCT....................................................................................................21112.0012000000000000000000000000000000000000000000100000000000000000000010000200020100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300010000000000000000000000
...............................................................T-----C------AACAC--TGGGTACTTGAGGAGATC......................................................................................................................25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000
......................................................................................................................................ATATAACACAGATGGCCTGTAA...............................................................22312.0036000000000000000000000004011000000000000000001000001200000000045721200300000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCTGC.................................................................20111.0011000000000000000000000008002000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTTATC............................................................26110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006100000000
................................................................................................................................TGACGAATATAACACAGATGGCCTGT.................................................................26110.0010000000000000000000000000000011600000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTTTT.............................................................2519.009000000000000000000000000010001000000000000000000000000000000051000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................AACAC--TGGGTACTTGAGG...........................................................................................................................1819.009000000000000000000000000000000000000000000000000000000000000000100000100012300000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGAG................................................................2249.0036000000000000000000000000000002300114100000011000000000000000000300012000010101001000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000520010000000000000000000000
......................................................................................................................................ATATAACACAGATGGCCT...................................................................1819.009000000000000000000000002010000000000000000000000001100000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTCC...............................................................2319.009000000000000000000000000000000000000000000000000000000000000071100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTAAT.............................................................2519.009000000000000000000000000000001000000000000000000000000000000011500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................AC--TGGGTACTTGAGGAG.........................................................................................................................1719.009000000000000000000000000000000000000000000000000000000000000001000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTTAGA.............................................................2518.008000000000000000000000000000000000000000000000000000000000000021000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000
.....................................................................................................................................AATATAACACAGATGGCCTGTCG...............................................................2318.008000000000000000000000000000000000000000000000000000000000000002011000000010210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATAACACAGATGGCCTGTTA...............................................................2018.008000000000000000000000000000000000000040000000000000000000000020110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ACGAATATAACACAGATGGCCTGT.................................................................2418.008000000000000000000000000000000000001000000000000000000000000010000030100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001
.....................................................................................................................................AATATAACACAGATGGCCTGTACA..............................................................2438.0024000000000001000000000000000000010000000000000010000000100000071711101000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
cavPor3
GGACCGCTCCGGAAGGCA-ATGC---CAGCACCACG-----------GCGACCACG------GTCCTGGCTTCAGCGTCAC--TCGGTACCTGAAGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTCTTCAGTACTGCCTTGCCCGC-----------GGCAGAGCGCC--------------GGCCAGCCSizeHit CountTotal NormTotal
No Reads
dipOrd1
GGGCAGCGGCAGGAGGTG-GCAC---CAGGCCCACA-----------GAGGCTGCG------GC-----C------TCCTC--TGGGTACCTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACCACCTATccccg-----------ggcgg-gggcc-gcc--gcg---ccccAGCGCCSizeHit CountTotal NormTotal
No Reads
hetGal2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
AGGCGACGCCGGGTGCCA-A--------------GGGATGCCCCCAACAGGCTGCA------G-----GCAGCAGCGTGGC--TGTGGCGCTGAGGAGAGGTTGTCTGTGATGAGTTCGCTGTATTAATGTCGAATATAACACAGATGGCCTGTTTTCGGCACCGCCTTGCCCTC-----------GGC-----GCC------G-----CGC--CAGCGSizeHit CountTotal NormTotal
No Reads
oryCun2
GGGCGCCTCCAGGCCACA-GGGACGTCGC-----GG-----------GACGCCGCTGTGGAG-AACTCGTGTCAGCGTCGCTGTGGGTG-CTGAGGGGAGGTTGTCTGTGATGAGTTCGCTGTATTAAAGCCGAATATAACACAGATGGCCTGTTTTCAGCACCGCCTAGCGCTC-----------GGC-----GCC--------------CCGCGGCASizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
.....................................................................................................................................AATATAACACAGATGGCCTGT.................................................................2113.00330
......................................................................................................................................ATATAACACAGATGGCCT...................................................................1812.00202
.....................................................................................................................................AATATAACACAGATGGCCT...................................................................1911.00110
rn5
GGACAGCTTCAGGTGGTGAATTC---CAGCCCCAGG-----------GGTGCTCCG------GT-----C------AACAC--TGGGTACTTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAATACCACCTGCCACTCCTGTCACT--TGGCAG-TACA-TGCCAGGTGTCACAGCACTGCCSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
.....................................................................................................................................AATATAACACAGATGGCCTGT.................................................................211108.00108000
.....................................................................................................................................AATATAACACAGATGGCCT...................................................................19275.50151000
.....................................................................................................................................AATATAACACAGATGGCCTG..................................................................20130.0030000
.....................................................................................................................................AATATAACACAGATGGCCTGTA................................................................2226.5013000
......................................................................................................................................ATATAACACAGATGGCCTGT.................................................................2014.004000
.....................................................................................................................................AATATAACACAGATGGCCTGTTT...............................................................2314.004000
..................................................................................................AGGTTGTCTGTGATGAGTTCGCTT.................................................................................................2413.003000
.......................................................................................................................................TATAACACAGATGGCCTGT.................................................................1912.002000
.....................................................................................................................................AATATAACACAGATGGCCTGTAA...............................................................2322.004000
......................................................................................................................................ATATAACACAGATGGCCT...................................................................1822.004000
.....................................................................................................................................AATATAACACAGATGGCC....................................................................1821.002000
..................................................................................................AGGTTGTCTGTGATGAGTTCGCT..................................................................................................2311.001000
.....................................................................................................................................AATATAACACAGATGGCCTGC.................................................................2111.001000
.....................................................................................................................................AATATAACACAGATGGCCTGTTA...............................................................2311.001000
.....................................................................................................................................AATATAACACAGATGGCCTGTAAA..............................................................2440.502000
........................................................................................................................................ATAACACAGATGGCCT...................................................................1670.141000
speTri2
GGGCG-CCCGAGGAGGCA-GCAC---CAG-----CG-----------GAGGCCACGGTCGAGGTCCTTGTGCCAGCATCACTGTGGGTACCTGAGGAGAGGTTGTCTGTGAAGAGTTCGCTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACCACCTCCCACTC---TCAGCGTGCGCGG-GCGCA------G-------CCAGTGCASizeHit CountTotal NormTotal
No Reads

Generated: 06/17/2015 at 02:32 PM