ID:

mmu-mir-3620

 Coordinate:

chrX:150547385-150547445 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-39.7 -39.3 -39.1

Sense Strand Reads

AACCTCTTACCTGTTGCCCTGCACTGAGGACGAACCAAAGACGGTGAGTGCTGTGGGCTGGGCTGGGAAGCAGCTTTCATCCCAGCCTCCTGCTCAGCCCCGCCCACCCCACCCCACCCCCTTCCGCCTCGGCCTTAAGGTATCTCAGGCCTCTGCTAAAG
***********************************..(((..((((.(((..((((((.((((((((.((..(((........)))...)).)))))))).))))))..)))..))))..)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR390297
fibroblast		 SRR391853
embryo		 SRR390298
fibroblast		 SRR391851
embryo		 SRR391852
embryo		 SRR042471
spleen		 SRR391848
embryo		 SRR391845
embryo		 SRR391846
embryo		 SRR069809
testes		 SRR391847
embryo		 SRR391850
embryo		 GSM510444
brain		 SRR037899
ovary		 SRR065045
liver		 SRR037898
ovary		 SRR039154
muscle		 SRR042456
bone marrow		 SRR042467
spleen		 SRR042468
lymph		 SRR042470
lymph		 SRR345200
brain		 SRR037902
testes		 SRR345197
brain		 SRR345198
brain		 SRR037928
embryo		 SRR039153
muscle		 SRR039152
muscle		 GSM361395
brain		 SRR059769
spleen		 SRR069834
blood		 SRR345199
brain
..................................................CTGTGGGCTGGGCTGGGAAGCA......................................................................................... 22 0 1 189.00 189 106 28 0 25 16 5 1 1 2 2 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGC.......................................................................................... 21 0 1 164.00 164 17 10 93 12 12 11 3 1 0 1 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAT........................................................................................ 23 1 1 84.00 84 25 24 0 12 9 12 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAA........................................................................................ 23 1 1 43.00 43 26 2 0 5 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAG........................................................................................... 20 0 1 39.00 39 14 5 0 7 5 5 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAAT....................................................................................... 24 2 1 21.00 21 10 3 0 1 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAGT....................................................................................... 24 1 1 20.00 20 8 2 0 3 3 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAG........................................................................................ 23 0 1 16.00 16 9 3 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAAA....................................................................................... 24 2 1 9.00 9 2 3 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCT......................................................................................... 22 1 1 9.00 9 7 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAGA....................................................................................... 24 1 1 8.00 8 5 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGA.......................................................................................... 21 1 1 7.00 7 1 0 0 3 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCATA....................................................................................... 24 2 1 6.00 6 0 2 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GAACCAAAGACGGTGAGTG............................................................................................................... 19 0 1 6.00 6 0 2 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CGAACCAAAGACGGTGAGTG............................................................................................................... 20 0 1 6.00 6 0 1 0 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTGCTCAGCCCCGCCCACCCCA.................................................. 22 0 1 5.00 5 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGAA......................................................................................... 22 1 1 5.00 5 3 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCATT....................................................................................... 24 2 2 4.50 9 0 2 0 3 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGTGGGCTGGGCTGGGAAGCA......................................................................................... 21 0 1 4.00 4 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAAAT...................................................................................... 25 2 1 3.00 3 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCATTTT..................................................................................... 26 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAA........................................................................................... 20 1 1 3.00 3 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAGTTA..................................................................................... 26 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAACA...................................................................................... 25 2 2 3.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAAAA...................................................................................... 25 3 3 2.67 8 5 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGATGGGAAGCA......................................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTGGGCTGGGAAGCA......................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAAG....................................................................................... 24 2 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAC........................................................................................ 23 1 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAATT...................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAT........................................................................................... 20 1 5 1.60 8 7 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGAAT........................................................................................ 23 2 2 1.50 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CCTCCTGCTCAGCCCCGCCCACC..................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGTGAAGCAT........................................................................................ 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTGGGCTTGGAAGC.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAGTT...................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ACGAACCAAAGACGGTGAGTG............................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGACGCA......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGTTGGGCTGGGAAGCA......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGTCTGGGAAG........................................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CGAACCAAAGACGGTCAGTG............................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCCGGGAAGC.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCGT........................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ACGAACCAAAGACGGTGAGT................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCGA........................................................................................ 23 2 2 1.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCATATTT.................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCAGAA...................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCCGGGAAGCAA........................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTGGGCTGGGAAGCAGT....................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTGCTCAGCCCCGCCCACCCC................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAACCA......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGCAGCAG........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGCTCAGCCCCGCCCACCCC................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCCGA....................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGACTGGGAAGC.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TGAACCAAAGACGGTGAGTG............................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTGGGCTGGGAAGC.......................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCCGTTC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTGGGCTGGGAAGT.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGTGGGCTGGGCTGGGAAG........................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGGGCTGGGCTGGGAAGCAGTT...................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGTGGGCTGGGCTGGGAAGCAG........................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGATGGGAAGCAT........................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGAAG........................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCCGGGAAGCAG........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGTA......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AACCAAAGACGGTGAGTG............................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCTAAT...................................................................................... 25 3 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGATGGGAAGCATATTT.................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAA............................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTGGGCTGGGAAGCAA........................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGT.......................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTGGGCTGGGAAGCAAG....................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAAA.......................................................................................... 21 2 8 0.88 7 6 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGCGAAGCT......................................................................................... 22 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................ATGTGGGCTGGGCTGGGAAGCAAT....................................................................................... 24 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGA............................................................................................. 18 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCC......................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCCTT....................................................................................... 24 3 6 0.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGTAT........................................................................................ 23 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGCTCG....................................................................................... 24 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGAATTTT..................................................................................... 26 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGCAGCA......................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GCTGTGGGCTTGGCTGGGAA............................................................................................ 20 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTATGGGCTGGGCTGGGAAGCT......................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GTGAGTGCTGTGGGCTCGGCTC................................................................................................ 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGTTGGGAAGCACTT...................................................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAAGTT......................................................................................... 22 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGAGCTGGGAAGC.......................................................................................... 21 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................CCCACCCCCCTCCGCGTCGG............................. 20 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGAACCT......................................................................................... 22 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGCAGCAATT...................................................................................... 25 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CTGGGCTGGGCTGGGAAGCA......................................................................................... 20 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTGGGCTGGGCAG........................................................................................... 20 1 14 0.14 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................TGGGAAGCTGTTTTCATCCCA............................................................................. 21 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................AGAAGGTGAGCGCTGTGGGCT...................................................................................................... 21 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CTGTGGGCTCGGCTGGGAAT........................................................................................... 20 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................CCACGCCCTTCCGACTCG.............................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................CCCCGCACCGAGGACGAA............................................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................TGGGCTGGGCTGGGAA............................................................................................ 16 0 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GCTGGGCTGGGAAGCGGC....................................................................................... 18 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................GCTCAGCCCCGCTCACCC.................................................... 18 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................CCCCGCCGACCCCACCCC.............................................. 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................GACGTTCAGTGCGGTGGGCT...................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................TGAGGACGAA............................................................................................................................... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................CATCCCCTTCGGCCTCGGCCC.......................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................CCCACCCCCCTCCGCGTCG.............................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................CGGGGTAGCAGCTTTCAT................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........ACTTGTAGCACTGCACTGAGG.................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTGGAGAATGGACAACGGGACGTGACTCCTGCTTGGTTTCTGCCACTCACGACACCCGACCCGACCCTTCGTCGAAAGTAGGGTCGGAGGACGAGTCGGGGCGGGTGGGGTGGGGTGGGGGAAGGCGGAGCCGGAATTCCATAGAGTCCGGAGACGATTTC
***********************************..(((..((((.(((..((((((.((((((((.((..(((........)))...)).)))))))).))))))..)))..))))..)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR073955
blood		 SRR040488
liver		 SRR059771
spleen		 SRR042467
spleen		 SRR345197
brain		 SRR391848
embryo		 SRR345200
brain		 GSM475281
testes		 SRR391850
embryo		 SRR391852
embryo		 SRR042468
lymph		 SRR345196
brain		 SRR345202
brain		 SRR345201
brain		 SRR042469
lymph		 SRR345207
brain		 SRR345199
brain		 SRR345198
brain		 SRR248526
testes		 SRR248527
testes		 SRR553583
cerebellum		 SRR039153
muscle		 SRR042463
spleen		 SRR059765
thymus		 SRR065059
pancreas		 SRR116846
epididymis		 SRR039154
muscle		 SRR039186
fibroblast		 SRR042455
blood		 SRR042470
lymph		 SRR042471
spleen		 SRR042472
lymph		 SRR042487
spleen		 SRR059767
thymus		 SRR065058
pancreas		 SRR069809
testes		 SRR073954
blood		 SRR077864
liver		 SRR077866
liver		 SRR206940
brain		 SRR248523
testes		 SRR248525
testes		 SRR345203
brain		 SRR391846
embryo		 SRR391853
embryo		 SRR553582
brain		 SRR553602
testes		 SRR553603
testes
.................................................................................................GGGGCGGCTGGGGTGGGG.............................................. 18 1 20 5.65 113 1 0 43 24 0 1 0 0 0 0 18 0 0 0 7 0 0 0 2 0 1 3 2 2 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1
..GGAGAATGGACAACGGGA............................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTGGAGAATGGACAACGGG.............................................................................................................................................. 19 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GGACAACGGGACGTGACTCCTG.................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TGGAGAATGGACAACGGG.............................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACGTGACTCCTGCTTGGTTTCTG....................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GGGACGTGACTCCTGCTTGGTT........................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CAACGGGACGTGACTCCTGCTTGG............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GACTCCTGCTTGGTTTCTGCCA.................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CTGCTTGGTTTCTGCCA.................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACGTGACTCCTGCTTGGTTTCTGCCAC................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GACTCCTGCTTGGTTTCTGCCACTCAC............................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GGACAACGGGACGTGACTCCTGCTT............................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GGACGTGACTCCTGCTTGGTTT.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............ACGGGACGTGACTCCTGCTTGGTTTCTG....................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAGGACAACGGGACGTGACTC..................................................................................................................................... 21 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GGGGCGGCTGGGGTGGG............................................... 17 1 20 0.70 14 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 4 1 0 0 0 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 0
.TGGAGAATGGACAACGGGC............................................................................................................................................. 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AATTCAATAGCGTCCGGACACG..... 22 3 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AGGCGCAGCCGGAATTCA..................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AATTCGATAGCGTCCGGACACG..... 22 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CCCTTCGTCGCAAGTAGG............................................................................... 18 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GGGGGAAGCCGGAGCCG............................ 17 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ATTCCATAGAGCTCGGAGCCG..... 21 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ATCCCATAGCGTCCGGAGAC...... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GGCGCAAGGCGGTGCCGGAAT........................ 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GGGCGGCTGGGGTGGGG.............................................. 17 1 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 1 0 0
..................................GGTTTCTGCCACTCCCG.............................................................................................................. 17 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GTGTGGGAAGGCGGAGC.............................. 17 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGGGGTGGGGGATGGCGGA................................ 19 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CAATTCCATAGAGGCCGGACA....... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAGAGTCCGGAGGCGA.... 16 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GCGCAGCGGGAATTCCA.................... 17 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GGGCGGCTGGGGTGGG............................................... 16 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGGGGATGGCGGAGCCA............................ 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GAATTCCATAGAGTCGGGACAA...... 22 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGGGGGAGGCGGAGC.............................. 16 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GGCGGGTGGGGTGGGGTG............................................ 18 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AATTCGATAGAGTCAGGAGA....... 20 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CGCGGCTCCTGCTTGGT............................................................................................................................ 17 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GGGGCGGCTGGGGTGGGGT............................................. 19 1 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GGAAGGGGGGGCCGGAATT....................... 19 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGGCGTGAGGGACGGCGGAGC.............................. 21 3 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TTGGGGCGGCTGGGGTGGG............................................... 19 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GGGCGGCTGGGGTGGGGT............................................. 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GGGGGAAGGC................................... 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GGGCAGGGTGCGGGAAGGCGG................................. 21 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CGGGGCGGCTGGGGT.................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................GGAAGGCGGAGC.............................. 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAGGCGGAGC.............................. 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................GACTTCCATAGAGTCAGGACA....... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ATTCCATAGAGTCAGGACATG..... 21 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CGGGGCGGGTGGGGT.................................................. 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TAGAAAGTAGGGTCGGA......................................................................... 17 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCGAAAGTAGGGTCGAA......................................................................... 17 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TCGGGGCGCGTGGGGT.................................................. 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTTGGGCGGGGGAAGGCGGGGC.............................. 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CTGCTTGGTTTCTCTCAC................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCCATAGAGTCCGGACATG..... 19 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GAGTCGGGGCGGGTG...................................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GCGGGTGGGGTGGCGT............................................. 16 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGGGGAAGGCGG................................. 13 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TCGGGTGGGGGAAGGC................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGGGCTGTGGGAAGGCG.................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGCGGAGCCGGATTTCC..................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGGGGAAGGC................................... 11 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGAGCCGGAATTCCT.................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GGGGGAAGGCGG................................. 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chrX:150547335-150547495 - mmu-mir-3620 AA---CCTCTTACCTGTTGCCCTGCACTGAGGACGAAC-CAAAGACG-GTGAGTGCTGTGGGCTGGGCTGGGAAGCAGCTTTCATCCCAGCCT-CCTGCTCAGCCCCGCCCAC---CCCACCCCACCCCCTT-----------CCGCCTCGGCC-TTAAGGTATCTCAGGCCTCTGCTAAAG
cavPor3 scaffold_170:1465843-1466008 - CA---GTACTTACCTGTTGCCCTGCACTGAGGACGAACCAAAAGACGGATGAGTGCTATGGGT-----TAGGACCTGGCATTTATCCCTACCACCAGACTTAGCTCCACCTAC---CCAG-----CCTATGACTGGACTGGCCTTGCATTTGCCCCAAAGTTATCTCAGGCCTCTGCTGGAG
dipOrd1 Unknown --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
hetGal2 Unknown --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_14566:81068-81223 + -A---GCTCTTACCTGTTGCCCTGCACTGAGGACGAAC-GAACCACGGGTGAGTGCTGTGCGC-----TAGGACCTGGCATTTATGCCTTCC--CCGCCTCAGCTCCACCCAC---CCCG-----CCTTCAGTT------GCCCTGTATTGGCCTGAGAGGTATCTCAGGCCTGTGCTAGAG
oryCun2 chrX:36451062-36451224 + GA---GCTCTTACCTGTTGCCCTGCACTGAGGACGAAC-GAACCACGGGTGGGTGTTGTGGGT-----TAGGATCTGGCATTTATCCCTTCC--CTGCCTCAGCTCCACCCAC---CCTG-----CCTTCTGTTGCCCAGGCCTTGCATTGGCCCCTAAGGTATCTCAGGCCTCTGCTGGAG
rn5 chrX:23610405-23610568 + TA---CTTCTTACCTGTTGCCCTGCACTGAGGACGAAC-CAAAGACG-GTGAGTACTGTGGGCTGGGCTGGGAAGCAGCTTTCATCCCAGCCT-CCGGCTCAACCCCGCCCAACCCCTCTCCCCACCCCCTT-----------CTGCCTTGGCC-CTAAGGTGTCTCAGGCCTCTGCGAAAG
speTri2 JH393561:1840934-1841101 + CAGCAGCGCTTACCTGTTGCCCTGCACTGAGGACGAAC-GAAAGACGGGTGAGTGTTCTGGGT-----TTGGACCTGGTGTTTATTCCTGCCCTCTGGCTCAGCTCCACCCAC---CCCG-----CCTTCTGCTGGCCTGGCCCTGAGTTGGCCCCAAAGGTATCTCAGGCCGCTGCTAGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
AA---CCTCTTACCTGTTGCCCTGCACTGAGGACGAAC-CAAAGACG-GTGAGTGCTGTGGGCTGGGCTGGGAAGCAGCTTTCATCCCAGCCT-CCTGCTCAGCCCCGCCCAC---CCCACCCCACCCCCTT-----------CCGCCTCGGCC-TTAAGGTATCTCAGGCCTCTGCTAAAGSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
.......................................................CTGTGGGCTGGGCTGGGAAGCA.........................................................................................................221189.001890000000000000000000000010000000000000000000000000000000000000120101251628000000001060000000000000000000000000000000000000001000000000000000500000000000000000000020000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGC..........................................................................................................211164.0016400000000000000000000000000000000000000000000000000000000000001033001212100000000017930000000000000000000000000000000000000000000000000000011100000000000000000000010000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAT........................................................................................................23184.0084000000001000000000000000000000000000000000000000000000000000001000012924000000002500000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAA........................................................................................................23143.0043000000000000000000000000000000000000000000000000000000000000000000055200000000260000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAG...........................................................................................................20139.0039000000000000000000000000000000000000000000000000000000000000000000075500000000140000000000000000000000000000000010000000000001000000000500000000000000000000010000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAAT.......................................................................................................24121.0021000000000000000000000000000000000000000000000000000000000000000020012300000000100000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAGT.......................................................................................................24120.002000000000000000000000000000000000000000000000000000000000000000000003320000000080000000000000000000000000000000000000000000000000000000300000000000000000000010000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAG........................................................................................................23116.001600000000000000000000000000000000000000000000000000000000000000000002230000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAAA.......................................................................................................2419.00900000000000000000000000000000000000000000000000000000000000000100000030000000020000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCT.........................................................................................................2219.00900000000000000000000000000000000000000000000000000000000000000000001100000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAGA.......................................................................................................2418.00800000000000000000000000000000000000000000000000000000000000000000000120000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGA..........................................................................................................2117.00700000000000000000000000000000000000000000000000000000000000000000003100000000010000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCATA.......................................................................................................2416.00600000000000000000000000000000000000000000000000000000000000000000003120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GAAC-CAAAGACG-GTGAGTG...............................................................................................................................1916.00600000000000000000000000000000000000000000000000000000000000001110000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGAAC-CAAAGACG-GTGAGTG...............................................................................................................................2016.00600000000000000000000000000000000000000000000000000000000000002100002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................CTGCTCAGCCCCGCCCAC---CCCA..............................................................2215.00500000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCATT.......................................................................................................2424.50900000000000000000000000000000000000000000000000000000000000000000003220000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000
........................................................TGTGGGCTGGGCTGGGAAGCA.........................................................................................................2114.00400000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAA...........................................................................................................2013.00300000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAAAA......................................................................................................2532.67800000000000000000000000000000000000000000000000000000000000000000001200000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCTGTGGGCTGGGCTGGGAAGCA.........................................................................................................2312.00200000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAAG.......................................................................................................2412.00200000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAC........................................................................................................2312.00200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAT...........................................................................................................2051.60800000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................CCT-CCTGCTCAGCCCCGCCCAC---C.................................................................2311.00100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACGAAC-CAAAGACG-GTGAGTG...............................................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCGT........................................................................................................2311.00100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACGAAC-CAAAGACG-GTGAGT................................................................................................................................2011.00100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCGA........................................................................................................2321.00200000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCAGAA......................................................................................................2511.00100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCTGTGGGCTGGGCTGGGAAGCAGT.......................................................................................................2511.00100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................CTGCTCAGCCCCGCCCAC---CCC...............................................................2111.00100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TGCTCAGCCCCGCCCAC---CCC...............................................................2011.00100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCTGTGGGCTGGGCTGGGAAGC..........................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCTGTGGGCTGGGCTGGGAAGT..........................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................TGTGGGCTGGGCTGGGAAG...........................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTGGGCTGGGCTGGGAAGCAG........................................................................................................2211.00100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AAC-CAAAGACG-GTGAGTG...............................................................................................................................1811.00100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAA............................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCTGTGGGCTGGGCTGGGAAGCAA........................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGT..........................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCTGTGGGCTGGGCTGGGAAGCAAG.......................................................................................................2511.00100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAAA..........................................................................................................2180.88700000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGA.............................................................................................................1820.50100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCC.........................................................................................................2220.50100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCCTT.......................................................................................................2460.50300000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGCTCG.......................................................................................................2420.50100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTGTGGGCTGGGCTGGGAAGTT.........................................................................................................2240.25100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................TGGGCTGGGCTGGGAA............................................................................................................16130.08100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGAGGACGAA.................................................................................................................................................10200.05100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
cavPor3
CA---GTACTTACCTGTTGCCCTGCACTGAGGACGAACCAAAAGACGGATGAGTGCTATGGGT-----TAGGACCTGGCATTTATCCCTACCACCAGACTTAGCTCCACCTAC---CCAG-----CCTATGACTGGACTGGCCTTGCATTTGCCCCAAAGTTATCTCAGGCCTCTGCTGGAGSizeHit CountTotal NormTotal
No Reads
dipOrd1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
hetGal2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
-A---GCTCTTACCTGTTGCCCTGCACTGAGGACGAAC-GAACCACGGGTGAGTGCTGTGCGC-----TAGGACCTGGCATTTATGCCTTCC--CCGCCTCAGCTCCACCCAC---CCCG-----CCTTCAGTT------GCCCTGTATTGGCCTGAGAGGTATCTCAGGCCTGTGCTAGAGSizeHit CountTotal NormTotal
No Reads
oryCun2
GA---GCTCTTACCTGTTGCCCTGCACTGAGGACGAAC-GAACCACGGGTGGGTGTTGTGGGT-----TAGGATCTGGCATTTATCCCTTCC--CTGCCTCAGCTCCACCCAC---CCTG-----CCTTCTGTTGCCCAGGCCTTGCATTGGCCCCTAAGGTATCTCAGGCCTCTGCTGGAGSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
TA---CTTCTTACCTGTTGCCCTGCACTGAGGACGAAC-CAAAGACG-GTGAGTACTGTGGGCTGGGCTGGGAAGCAGCTTTCATCCCAGCCT-CCGGCTCAACCCCGCCCAACCCCTCTCCCCACCCCCTT-----------CTGCCTTGGCC-CTAAGGTGTCTCAGGCCTCTGCGAAAGSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
CAGCAGCGCTTACCTGTTGCCCTGCACTGAGGACGAAC-GAAAGACGGGTGAGTGTTCTGGGT-----TTGGACCTGGTGTTTATTCCTGCCCTCTGGCTCAGCTCCACCCAC---CCCG-----CCTTCTGCTGGCCTGGCCCTGAGTTGGCCCCAAAGGTATCTCAGGCCGCTGCTAGAGSizeHit CountTotal NormTotal
No Reads

Generated: 05/01/2015 at 02:00 AM