ID:

mmu-mir-3058

 Coordinate:

chr10:95559231-95559321 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-42.9 -42.9 -42.1

Sense Strand Reads

GTCTAGCTACCATTTGTATGATTTGTCAGAGGGTGATTTCGGGATAATTCTCCAGCGTTGGAGTCAGCCACGGCTTACCTGGAAGATTGAATGTCTACTTGGCTTTCTTCCTGTCAGCCGTGGGTGCCTCTTGCTACTGGAAGAGCTCTGTGATGGTTCTGATTCGTTGCTTCAGTAATACCATGTGTTTA
************************************************..(((((.((.((((.((.((((((((.((..((((((......(((.....)))..)))))).)).)))))))).)).)))).))..)))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR391846
embryo		 SRR391845
embryo		 SRR391847
embryo		 SRR073955
blood		 SRR069809
Type_A_spermatogonia		 SRR095853
heart		 SRR039185
fibroblast		 SRR039186
fibroblast		 SRR391848
embryo		 SRR040488
liver		 SRR390297
fibroblast		 SRR039183
fibroblast		 SRR391852
embryo		 SRR391849
embryo		 SRR391853
embryo		 SRR039184
fibroblast		 SRR077866
liver		 SRR073954
blood		 SRR1509751
foetal_primordial_germ_cells		 SRR391850
embryo		 SRR391851
embryo		 SRR059765
thymus		 SRR059767
thymus		 SRR077864
liver		 SRR1509750
spermatogonia		 GSM510444
brain		 SRR037905
brain		 SRR042480
kidney		 SRR345203
brain		 SRR037924
embryo		 SRR037920
embryo		 SRR037921
embryo		 SRR037925
embryo		 SRR042459
blood		 SRR059770
spleen		 SRR553583
cerebellum		 SRR038744
brain		 SRR059766
thymus		 SRR553582
brain		 SRR037906
brain		 SRR037929
embryo		 SRR065054
jejunum		 SRR248526
Thy1-_somatic_testes_cells		 SRR065059
pancreas		 SRR1509748
spermatozoa		 SRR014231
testes		 SRR042468
lymph		 SRR042471
spleen		 SRR065052
jejunum		 SRR065053
jejunum		 SRR069834
blood		 SRR095855BC1
heart		 SRR248525
Thy1-_somatic_testes_cells		 SRR553584
heart		 SRR553585
kidney		 SRR059768
spleen		 SRR014234
ovary		 SRR032477
uterus		 SRR042460
blood		 SRR042465
spleen		 SRR042472
lymph		 SRR042481
pancreas		 SRR042484
salivary gland		 SRR065058
pancreas		 SRR095855BC2
heart		 SRR206942
brain		 SRR345204
brain		 SRR345199
brain		 SRR345197
brain		 SRR042470
lymph		 GSM475281
testes		 GSM509279
testes		 GSM566420
fibroblast		 SRR014235
testes		 SRR037907
brain		 SRR037922
embryo		 SRR037923
embryo		 SRR037928
embryo		 SRR039610
brain		 SRR042455
blood		 SRR042461
bone marrow		 SRR042464
thymus		 SRR042467
spleen		 SRR042469
lymph		 SRR042473
lymph		 SRR042487
spleen		 SRR051940
testes		 SRR059771
spleen		 SRR060845
brain		 SRR065046
liver		 SRR065047
liver		 SRR065050
liver		 SRR065055
jejunum		 SRR077865
liver		 SRR095855BC10
heart		 SRR116846
epididymis		 SRR206940
brain		 SRR345205
brain		 SRR345196
brain		 SRR039153
muscle		 SRR345201
brain		 SRR345207
brain		 SRR345198
brain		 SRR039152
muscle		 SRR345200
brain		 SRR039154
muscle		 SRR095855BC5
heart		 SRR345202
brain
...............................................................TCAGCCACGGCTTACCTGGAAGA......................................................................................................... 23 0 1 781.00 781 246 133 119 37 12 0 15 16 9 12 15 8 13 13 10 9 8 7 0 7 7 4 5 2 0 5 1 1 0 2 4 3 5 3 3 1 3 4 1 0 2 4 2 1 0 0 0 1 1 2 2 2 0 2 1 2 1 2 1 0 0 1 2 0 2 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAG.......................................................................................................... 22 0 1 209.00 209 83 36 33 2 5 0 1 0 7 0 0 0 3 3 5 0 1 0 0 4 2 0 0 0 0 1 3 2 2 0 0 0 0 0 0 1 1 0 1 1 0 0 0 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAA........................................................................................................... 21 0 1 32.00 32 3 7 2 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CAGCCACGGCTTACCTGGAAGA......................................................................................................... 22 0 1 29.00 29 7 7 7 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGA............................................................................................................ 20 0 1 23.00 23 0 5 2 0 4 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCT.............................................................. 22 0 1 23.00 23 1 0 0 6 3 0 5 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAGAA........................................................................................................ 24 1 1 22.00 22 12 1 2 1 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTCAGCCACGGCTTACCTGGAAGA......................................................................................................... 24 1 1 17.00 17 1 0 1 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCC............................................................... 21 0 1 16.00 16 0 1 0 4 0 0 1 1 1 1 0 2 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGC................................................................ 20 0 1 16.00 16 1 1 0 3 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAGAT........................................................................................................ 24 0 1 14.00 14 3 5 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTCAGCCACGGCTTACCTGGAAG.......................................................................................................... 23 1 1 12.00 12 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAGT......................................................................................................... 23 1 1 12.00 12 2 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ATTTGTATGATTTGTCAGAGGGTATC.......................................................................................................................................................... 26 3 1 11.00 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAA.......................................................................................................... 22 1 1 9.00 9 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTG................................................................. 19 0 1 8.00 8 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAATC......................................................................................................... 23 2 1 6.00 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAGC......................................................................................................... 23 1 1 6.00 6 1 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCTAT............................................................ 24 1 1 6.00 6 0 0 0 1 0 0 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CAGCCACGGCTTACCTGGAAGAA........................................................................................................ 23 1 1 5.00 5 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CCAGCCACGGCTTACCTGGAAGA......................................................................................................... 23 1 1 5.00 5 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CAGCCACGGCTTACCTGGAAG.......................................................................................................... 21 0 1 5.00 5 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCA.............................................................. 22 1 1 5.00 5 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCCGGAAGA......................................................................................................... 23 1 1 5.00 5 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCTAA............................................................ 24 2 1 5.00 5 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGT.................................................................. 18 0 2 4.50 9 0 0 0 0 0 0 2 1 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AGCCACGGCTTACCTGGAAGA......................................................................................................... 21 0 1 4.00 4 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGCAGA......................................................................................................... 23 1 1 4.00 4 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ACAGCCACGGCTTACCTGGAAGA......................................................................................................... 23 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TCTCAGCCACGGCTTACCTGGAAGA......................................................................................................... 25 2 1 4.00 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTCGAAGA......................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAGAAA....................................................................................................... 25 2 1 3.00 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GCCACGGCTTACCTGGAAGATTG...................................................................................................... 23 0 1 3.00 3 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAT.......................................................................................................... 22 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCCGCCACGGCTTACCTGGAAGA......................................................................................................... 23 1 1 3.00 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCACCCACGGCTTACCTGGAAGA......................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGT................................................................ 20 1 2 2.50 5 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CTTCCTGTCAGCCGTGGGTGCCT.............................................................. 23 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCAAT............................................................ 24 2 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCTATA........................................................... 25 2 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGA................................................................ 20 1 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AATCAGCCACGGCTTACCTGGAAGA......................................................................................................... 25 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCTTT............................................................ 24 1 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCAGCCGTGGGTGCCTT............................................................. 23 1 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCATGGCTTACCTGGAAGA......................................................................................................... 23 1 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACAGCTTACCTGGAAGA......................................................................................................... 23 1 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTTGCTACTGGAAGAGCTCTGTGATGGTTCTGAT............................ 34 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCCACGGCTTACCTGGAAAA......................................................................................................... 23 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AGCCACGGCTTACCTGGAAG.......................................................................................................... 20 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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...............................................................TCAGCCACGGGTTCCCGGGAAG.......................................................................................................... 22 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TAGCTGCCAGTTGTATGATT........................................................................................................................................................................ 20 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................TCCTATCTGCCGTGGGTGC................................................................ 19 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGTTTCGGATTCGTTGCT.................... 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCCTGTCGGCCGAGCGTGC................................................................ 20 3 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCAGCAGCGGCTTACCTCGAA........................................................................................................... 21 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................CCAGCCACGGCTTACC................................................................................................................ 16 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCCAGCGTTGGAATC.............................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGGTTCGGATTCGTAGC..................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ATGTCTACTTGGCTATC.................................................................................... 17 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGTTATGATTCGTCGCT.................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................TAGTCGAAGAGCTCTGTGA...................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGGTTCTGATTCGTC....................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGGTTCGGATTCGTCGCTTT.................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................TGGTTCTGATTCGGCGCTTT.................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................GTAAGATTCAATGTCTACT............................................................................................ 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................GTGATTTCGGGA................................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................TGGTTCGGATTCGTAG...................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAGATCGATGGTAAACATACTAAACAGTCTCCCACTAAAGCCCTATTAAGAGGTCGCAACCTCAGTCGGTGCCGAATGGACCTTCTAACTTACAGATGAACCGAAAGAAGGACAGTCGGCACCCACGGAGAACGATGACCTTCTCGAGACACTACCAAGACTAAGCAACGAAGTCATTATGGTACACAAAT
***********************************************..(((((.((.((((.((.((((((((.((..((((((......(((.....)))..)))))).)).)))))))).)).)))).))..)))))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM361408
brain		 GSM361395
brain		 GSM361402
brain		 SRR037925
embryo		 SRR073954
blood		 SRR037924
embryo		 SRR345204
brain		 SRR345200
brain		 SRR345201
brain		 SRR1509748
spermatozoa		 SRR345198
brain		 SRR042484
salivary gland		 SRR345202
brain		 SRR345205
brain		 SRR345206
brain
...........................................................................................................AAGGACAGTCGGCACCCACGGA.............................................................. 22 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................AGTCGGTGCCGAATGGACCTTCT......................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GCCGTATTAAGAGGTTGCAAG................................................................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................ACAGTCTCCCACTAA......................................................................................................................................................... 15 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................CCGAAAGATGGACAGTCG......................................................................... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............ATATACTTAACAGTCGCCCACT........................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................CAACCTCGGGCGGTGCCGA.................................................................................................................... 19 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CTAAGCATCGAAGTCA............... 16 1 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
................................................................GTCGGTGCCGCAAGGACCT............................................................................................................ 19 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................AGTCGGCACGCGCGGAGA............................................................ 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................AAGAAAGTCGGCACCCACG................................................................ 19 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................CAACCTCGGGCGGTGCCG..................................................................................................................... 18 2 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TCGGTGCCGAA................................................................................................................... 11 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................CTCAGTCGGTGCGGAA................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................CCTATTAAGGGGTCGCTA.................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................CCACCTCAGGCGGTGCCG..................................................................................................................... 18 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................CCCCAATAAGAGGTCGCA..................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................CATTCTCCCGCTAAAGC...................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................ATTACGGATGAACCGAAGGAAG................................................................................. 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................GCCAGTCGGCACCCCCTGAG............................................................. 20 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr10:95559181-95559371 - mmu-mir-3058 GTCTAGCTACCATTTGTATGATTTGTCAGAGGGTGATTTCGGGATAATTCTCCAGC-------------------GTTGGAGTCAGCCACGGCTTACCTGGAAGATTGAATGTCTACTTGG--CTTTCTTCCTGTCAGCCGTGGGTGCCTCTTGCTACTGGAA----------------------------------GAGCTCTGTGA-------------------------------TGGTTCTGATTCGTTGCTTCAGTAATACCATGTGTTTA
cavPor3 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dipOrd1 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
hetGal2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
oryCun2 Unknown -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
rn5 chr7:36707878-36708059 - ---------------------TTTGTCCTAGGGTGATTTCAGGATAATTCTACAGCCCGGTGGGCTGTTCTTTCCTTTGGAGTTAGCCA-AACTTACCTTGAAGACTGAATGTCTACTTGC--CTTTCTT-----TGGCTGTGGTTGCTTCTTCTGCCGGGAA----------------------------------GAGTTCTCT-A-------------------------------TAGTTCTGCTTCGTTGCTTCAGTGATGCTATCCGCTTA
speTri2 JH393317:9856025-9856223 + ---------------------TTGGTC-------------------------------------------------------TCAGCCCTGGTTTATATGGAAGGTTGGATATCTACTTTCATCTGTCATCTTATCAATGTGACATATCTCCTGACAGTGGATATGGAAAATAAATTTAAAACCTAGTGACCACATATAAC--TCTGATAGCTGTTAGTGTATTGTCTTAATGAGATTTTACATGAGCTTTGTTAGGTCAGTCGTACCATTTTTAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
GTCTAGCTACCATTTGTATGATTTGTCAGAGGGTGATTTCGGGATAATTCTCCAGC-------------------GTTGGAGTCAGCCACGGCTTACCTGGAAGATTGAATGTCTACTTGG--CTTTCTTCCTGTCAGCCGTGGGTGCCTCTTGCTACTGGAA----------------------------------GAGCTCTGTGA-------------------------------TGGTTCTGATTCGTTGCTTCAGTAATACCATGTGTTTASizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
Type_A_spermatogonia		SRR069810
pachytene_spermatocytes		SRR069811
round_spermatid		SRR248523
Thy1+_spermatogonia		SRR248524
Thy1+_spermatogonia		SRR248525
Thy1-_somatic_testes_cells		SRR248526
Thy1-_somatic_testes_cells		SRR248527
spermatogonia		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
sertoli_cells		SRR553603
spermatids		SRR553604
spermatocytes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus		SRR1509747
oocyte		SRR1509748
spermatozoa		SRR1509749
zygote		SRR1509750
spermatogonia		SRR1509751
foetal_primordial_germ_cells		SRR1647947
Dgcr8_WT_leptotene_zygotene_spermatocytes		SRR1647948
Dgcr8_cKO_leptotene_zygotene_spermatocytes		SRR1647949
Dicer_WT_leptotene_zygotene_spermatocytes		SRR1647950
Dicer_cKO_leptotene_zygotene_spermatocytes		SRR1647951
Dgcr8_WT_pachytene_spermatocytes		SRR1647952
Dgcr8_cKO_pachytene_spermatocytes		SRR1647953
Dicer_WT_pachytene_spermatocytes		SRR1647954
Dicer_cKO_pachytene_spermatocytes
..................................................................................TCAGCCACGGCTTACCTGGAAGA............................................................................................................................................................................231781.00781031273700000000000000000501000300000020000000000000430025000201332461199137713101008915160150200202000000012400112001100120800000000001000001010000010203000001000000000001200000200000000112100000445020000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAG.............................................................................................................................................................................221209.00209000002000000000000000001031101000000000000002000000000000010036833373423500000100000000000000000100102000000000010201000000000000001002001000000000000000000000500000000000000110000001000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAA..............................................................................................................................................................................21132.0032000000000000000000000000010000101000000000000200001200000000073200100000000000000000000000000000000000000001100000000000000000000000000100000000000000000000800000000000000000000000000000000000000000
...................................................................................CAGCCACGGCTTACCTGGAAGA............................................................................................................................................................................22129.0029000000000010000000000000000000000000000000000000000000000000077700010000010020000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000
..................................................................................TCAGCCACGGCTTACCTGGA...............................................................................................................................................................................20123.0023000100000000000000000000000001000000000000000000000000100000050200000000000000000000000000000000001000000002030000000000000000000000000000000000000000000000400000100000000100000000100000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCT...............................................................................................................................22123.0023010006000000000000000000000000000000000000000000000000000000001020000000020510000000000000000000000000000000000000000000000000000000010000000000000000000000300001000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGAA...........................................................................................................................................................................24122.00221000210000000000000000000000000000000000000000000000000000000112200000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCC................................................................................................................................21116.0016000014000000000000000000000000000000000000000000000000000001010011100000021110000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGC.................................................................................................................................20116.0016000003000000000000000000000000000000000000000000000000000000011040000000000110000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000110000000001000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGAT...........................................................................................................................................................................24114.0014000001000000000000000000000000000000000000000000000100000000053110000000010000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGT............................................................................................................................................................................23112.0012010000000000000000000000000000000000000000000000000000000000012100000000000000000000000000000100000100000000010010000000000000000000001000000010000000000000100000000000000000000000000000000000000000
...........ATTTGTATGATTTGTCAGAGGGTATC................................................................................................................................................................................................................................................26111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000
..................................................................................TCAGCCACGGCTTACCTGGAAA.............................................................................................................................................................................2219.009000000000000000000000000010000000000000000002000000000000000001010000000000000000001000000000000000000000001000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTG..................................................................................................................................1918.008000001000000000000000000000000000000000000000000000000000000000001000000010100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000110100000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAATC............................................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGC............................................................................................................................................................................2316.006000004000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CAGCCACGGCTTACCTGGAAGAA...........................................................................................................................................................................2315.005000000000000000000000000000000000000000000002000000000000000020000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CAGCCACGGCTTACCTGGAAG.............................................................................................................................................................................2115.005000000000000000000000000000000000000000000000000000000000000021200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCA...............................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000200000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCTAA.............................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGT...................................................................................................................................1824.509000000000000000000000000000000000000000000000000000000000000000000000000002210000000000000000000000200000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................AGCCACGGCTTACCTGGAAGA............................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000020000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGAAA..........................................................................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCCACGGCTTACCTGGAAGATTG.........................................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000001100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAT.............................................................................................................................................................................2213.003001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGT.................................................................................................................................2022.505000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTTCCTGTCAGCCGTGGGTGCCT...............................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGA.................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCTT..............................................................................................................................2312.002000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CTTGCTACTGGAA----------------------------------GAGCTCTGTGA-------------------------------TGGTTCTGAT............................3412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
....................................................................................AGCCACGGCTTACCTGGAAG.............................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCAT..............................................................................................................................2312.002000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........ATTTGTATGATTTGTCAGAGGGTATA................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.................ATGATTTGTCAGAGGGT...................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TACCTGGAAGATTGAATGTCTA.................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAAGA...........................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGAG...........................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAAG............................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAT..............................................................................................................................................................................2111.001000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTG.................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................CTTCCTGTCAGCCGTGGGTGCCAT..............................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GGAA----------------------------------GAGCTCTGTGA-------------------------------TGGTTCTG..............................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................CCACGGCTTACCTGGAAG.............................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGATT.............................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GA-------------------------------TGGTTCTGATTCGTTGCTTCAGT...............2511.001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGCTACTGGAA----------------------------------GAGCTCTGTGA-------------------------------TGGTTCTGAT............................3211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................CAGCCACGGCTTACCTGGAA..............................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTTCCTGTCAGCCGTGGGTGCCA...............................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGAC...........................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCTAAA............................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATTTGTATGATTTGTCAGAGGGTATG................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................TCCTGTCAGCCGTGGGTGC.................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................AGCCACGGCTTACCTGG................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................TTCTTCCTGTCAGCCGTGGGTG..................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCTG..............................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGGA...........................................................................................................................................................................2411.001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GTATGATTTGTCAGAGGGTGATT...............................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGCTACTGGAA----------------------------------GAGCTCTGTGA-------------------------------TGGTT.................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................ACGGCTTACCTGGAAGAT...........................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGG............................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CGGCTTACCTGGAAGA............................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGATA.............................................................................................................................................................................2221.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCTAG.............................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCTCAAA...........................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GCTCTGTGA-------------------------------TGGTTCTGATT...........................2011.001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGGAAGATT..........................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAGGGTGATTTCGGGAT........................................................................................................................................................................................................................................1711.001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTTCTTCCTGTCAGCCGTG......................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTACCTGG................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCTAGA............................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................CAGCCACGGCTTACCTGGAAGAT...........................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCAAG.............................................................................................................................2420.501000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCAG...............................................................................................................................2220.501000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TCAGCCACGGCTTAC....................................................................................................................................................................................1520.501000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTCCTGTCAGCCGTGGGTGCCAAA.............................................................................................................................2430.331000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TGGTTCTGATTCGTC.......................15200.051000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGATTTCGGGA.........................................................................................................................................................................................................................................12200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
cavPor3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dipOrd1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
hetGal2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
oryCun2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
---------------------TTTGTCCTAGGGTGATTTCAGGATAATTCTACAGCCCGGTGGGCTGTTCTTTCCTTTGGAGTTAGCCA-AACTTACCTTGAAGACTGAATGTCTACTTGC--CTTTCTT-----TGGCTGTGGTTGCTTCTTCTGCCGGGAA----------------------------------GAGTTCTCT-A-------------------------------TAGTTCTGCTTCGTTGCTTCAGTGATGCTATCCGCTTASizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
No Reads
speTri2
---------------------TTGGTC-------------------------------------------------------TCAGCCCTGGTTTATATGGAAGGTTGGATATCTACTTTCATCTGTCATCTTATCAATGTGACATATCTCCTGACAGTGGATATGGAAAATAAATTTAAAACCTAGTGACCACATATAAC--TCTGATAGCTGTTAGTGTATTGTCTTAATGAGATTTTACATGAGCTTTGTTAGGTCAGTCGTACCATTTTTAGASizeHit CountTotal NormTotal
No Reads

Generated: 06/17/2015 at 12:26 PM