ID:

mmu-mir-196b

 Coordinate:

chr6:52230081-52230165 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-34.9 -34.9

Sense Strand Reads

CAGCAGCGGAGGCGGCGAGGGGCGAGGCAACCCTACGCCCGCAGCATCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAAGCATCTCCAGGTACCTGTCCAGAGCAGCCCGGGATGGCTAGGCGGGC
**************************************************((((((..((((((..(((((((.((.(((((((((((..........))))))))))).)).)))))))..))))))))))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553585
kidney		 SRR391853
embryo		 SRR391851
embryo		 SRR391852
embryo		 SRR037929
embryo		 SRR037928
embryo		 SRR037925
embryo		 SRR037924
embryo		 SRR037927
embryo		 SRR037930
embryo		 SRR032476
uterus		 SRR037923
embryo		 SRR037926
embryo		 SRR032477
uterus		 SRR039186
fibroblast		 SRR037921
embryo		 SRR042480
kidney		 SRR037920
embryo		 SRR116846
epididymis		 SRR039185
fibroblast		 SRR039183
fibroblast		 SRR039184
fibroblast		 SRR391846
embryo		 SRR391845
embryo		 SRR391847
embryo		 SRR553602
testes		 SRR073954
blood		 SRR248526
testes		 SRR390298
fibroblast		 SRR037922
embryo		 SRR391848
embryo		 SRR042456
bone marrow		 SRR391849
embryo		 SRR391850
embryo		 SRR014231
testes		 SRR037919
embryo		 SRR042475
fibroblast		 SRR037897
ovary		 SRR248525
testes		 SRR039152
muscle		 SRR039154
muscle		 SRR037898
ovary		 SRR248524
testes		 SRR039153
muscle		 SRR069834
blood		 SRR390297
fibroblast		 SRR042486
ovary		 SRR042483
muscle		 SRR042462
bone marrow		 SRR248523
testes		 SRR553584
heart		 SRR040488
liver		 SRR553586
testes		 SRR248527
testes		 SRR042459
blood		 SRR037899
ovary		 GSM475281
testes		 SRR014234
ovary		 SRR059765
thymus		 SRR037902
testes		 SRR037901
testes		 SRR042482
skin		 SRR042460
blood		 SRR073955
blood		 SRR553582
brain		 SRR042471
spleen		 SRR059766
thymus		 SRR059767
thymus		 SRR553604
testes		 SRR059770
spleen		 SRR042466
spleen		 SRR553603
testes		 SRR069809
testes		 SRR065055
jejunum		 SRR042461
bone marrow		 SRR065059
pancreas		 SRR042484
salivary gland		 SRR042457
bone marrow		 GSM509275
testes		 SRR042463
spleen		 SRR206941
brain		 GSM510444
brain		 SRR037903
testes		 SRR077866
liver		 SRR095853
heart		 SRR042479
liver		 GSM509279
testes		 SRR042476
heart		 SRR051940
testes		 SRR553583
cerebellum		 SRR206940
brain		 SRR065054
jejunum		 GSM566420
fibroblast		 SRR014236
testes		 SRR037896
ovary		 SRR065052
jejunum		 SRR065058
pancreas		 SRR069810
testes		 SRR069811
testes		 SRR077864
liver		 SRR042477
brain		 SRR065046
liver		 SRR042485
testes		 SRR037900
testes		 SRR037905
brain		 SRR042473
lymph		 SRR042478
lung		 SRR042481
pancreas		 SRR042487
spleen		 SRR059768
spleen		 SRR059769
spleen		 SRR065053
jejunum		 SRR095855BC1
heart		 SRR095855BC2
heart		 SRR206942
brain		 SRR065050
liver		 SRR095855BC10
heart		 GSM317181
brain		 GSM317182
brain		 GSM566419
fibroblast		 SRR042472
lymph		 SRR065049
liver		 SRR065056
jejunum		 SRR095855BC4
heart		 SRR095855BC7
heart		 SRR206939
brain		 SRR345203
brain		 SRR525238
Blood		 SRR065048
liver
.................................................................TAGGTAGTTTCCTGTTGTTGGG.................................................................................................. 22 0 1 250531.00 250531 41155 41975 39234 31534 21682 14282 12719 9793 6070 3891 2184 3116 2367 1542 473 2515 745 1737 1313 346 316 290 1304 1280 1005 1102 771 734 4 770 677 278 502 483 1 349 301 118 185 173 182 120 113 121 99 94 44 16 65 76 45 27 40 48 2 20 5 5 4 9 8 4 0 8 4 0 0 1 11 0 0 4 2 0 2 3 0 1 1 0 4 1 0 0 0 1 1 1 1 4 2 0 1 1 1 1 2 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGA................................................................................................. 23 0 1 98459.00 98459 3533 22783 19520 16454 6879 5375 3300 2738 1779 1181 637 795 613 335 2703 770 202 576 295 1582 1367 1249 493 441 393 47 257 42 890 208 164 23 141 90 68 90 34 52 13 19 16 39 8 8 41 88 9 11 7 6 5 13 9 8 2 12 5 6 3 2 4 1 1 1 1 0 5 0 1 0 1 1 1 0 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 1 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGG................................................................................................... 21 0 1 70370.00 70370 36510 1782 1574 1607 4654 3297 4120 3497 1251 833 1525 1001 770 906 615 585 158 466 604 491 362 450 225 118 120 572 235 428 0 189 110 101 50 82 0 83 98 100 117 18 26 65 81 12 37 1 20 32 16 35 54 30 27 25 32 20 33 5 19 7 3 10 10 2 4 3 0 5 4 5 1 7 7 5 0 1 2 0 1 0 0 0 1 1 0 0 1 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGT................................................................................................. 23 1 1 61716.00 61716 11722 6997 4798 4699 5438 4710 5220 4861 1431 952 1275 1189 903 816 442 739 345 587 370 229 248 202 182 239 121 109 207 285 781 194 150 168 94 80 194 120 24 63 61 41 43 44 34 26 20 28 21 17 11 39 18 20 13 9 0 11 0 10 7 7 3 1 1 4 4 0 2 3 1 5 0 2 1 0 4 5 0 1 0 1 1 2 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGAT................................................................................................ 24 0 1 15328.00 15328 577 2369 1900 1647 1670 1360 1599 1391 419 269 48 351 273 42 160 203 17 158 22 101 93 72 57 71 43 6 42 14 0 53 19 9 23 9 134 30 0 12 3 2 0 10 3 1 14 0 0 6 1 0 0 3 1 3 4 1 0 1 3 2 3 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGAA................................................................................................ 24 1 1 11026.00 11026 112 2214 2146 1839 868 693 445 381 222 136 31 135 87 23 486 87 11 71 1 296 225 172 62 52 53 4 22 2 0 18 8 1 9 5 56 15 0 9 0 0 0 7 1 0 2 0 2 1 1 1 0 2 0 2 0 3 0 0 2 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGA.................................................................................................. 22 1 1 9283.00 9283 4002 480 372 372 353 239 230 232 78 69 598 72 55 364 164 35 309 25 532 102 83 91 12 10 11 21 15 51 0 7 9 41 3 3 1 6 31 29 14 10 8 14 6 4 5 5 16 10 2 2 13 2 9 3 6 12 6 4 1 1 2 1 2 0 1 2 2 0 0 0 1 0 2 3 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGT.................................................................................................. 22 1 1 4585.00 4585 1973 126 81 109 303 406 275 343 75 53 161 49 34 106 6 61 79 35 67 0 4 6 12 6 7 8 27 43 0 10 3 8 1 2 0 5 4 6 10 18 9 3 9 12 4 0 3 0 1 3 1 2 2 0 0 3 2 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGTT................................................................................................ 24 1 1 4114.00 4114 562 503 399 405 336 346 375 377 76 38 57 66 64 61 10 42 39 33 37 9 4 2 21 21 4 6 9 19 0 10 4 39 7 6 70 8 0 6 4 1 5 1 2 1 1 0 4 8 1 3 0 0 1 0 5 1 0 0 1 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTG.................................................................................................... 20 0 1 2137.00 2137 505 20 21 18 109 104 155 140 44 18 19 41 19 15 177 11 15 13 18 155 105 135 10 16 10 12 11 28 0 4 7 2 2 6 0 2 0 6 10 0 1 5 3 1 0 0 1 32 0 1 0 7 2 0 20 4 14 4 22 0 0 1 1 0 2 6 4 7 0 3 3 0 0 2 0 0 2 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGAGTTTCCTGTTGTTGGG.................................................................................................. 22 1 1 1615.00 1615 56 179 120 96 382 135 242 174 18 25 20 13 35 16 0 24 8 13 10 0 0 0 9 2 2 4 7 0 0 7 0 6 0 0 0 0 1 0 0 4 2 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGTA................................................................................................ 24 2 1 1508.00 1508 216 301 211 196 96 66 72 52 28 17 23 10 21 21 8 17 7 7 6 5 5 10 10 5 11 2 6 8 0 3 3 4 3 3 38 1 1 0 2 2 1 1 1 1 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TCGACAGCACGACACTGCCTTCA.............................................................. 23 0 1 1460.00 1460 0 10 13 10 142 148 77 55 56 25 213 21 11 158 1 27 14 15 0 0 1 0 60 76 56 0 1 0 0 3 117 3 80 43 0 3 0 7 0 1 1 4 0 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTTGG.................................................................................................. 22 1 1 1447.00 1447 117 15 20 21 109 76 126 71 10 5 121 7 1 88 1 14 417 6 13 2 2 1 0 1 0 0 1 2 0 2 0 78 0 1 0 2 9 0 0 39 23 2 1 13 0 0 11 0 11 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGGTAGTTTCCTGTTGTTGGG.................................................................................................. 21 0 1 1413.00 1413 46 108 66 71 425 268 47 28 108 72 4 7 10 1 1 41 2 20 4 1 0 0 1 5 5 3 2 0 0 8 9 0 12 14 0 7 0 5 0 2 0 3 0 0 0 0 0 1 0 0 3 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGTG.................................................................................................. 22 1 1 1270.00 1270 12 11 16 17 184 52 187 82 6 28 39 4 5 18 0 24 413 6 8 1 0 0 1 0 0 0 1 0 0 2 0 68 0 0 0 0 2 0 0 14 17 0 0 16 0 0 8 0 22 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGTAGTTTCCTGTTGTTGGG.................................................................................................. 20 0 1 1163.00 1163 34 30 23 25 66 20 465 269 9 8 0 81 87 0 1 4 1 5 3 0 0 0 1 1 5 15 0 0 0 0 3 0 3 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TCGACAGCACGACACTGCCTTC............................................................... 22 0 1 1084.00 1084 1 2 11 5 156 114 64 83 44 20 160 10 15 160 0 10 17 10 1 0 0 2 21 38 19 0 0 0 0 3 35 2 41 25 0 0 0 4 0 0 0 1 0 0 3 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................TAGGAAGTTTCCTGTTGTTGGG.................................................................................................. 22 1 1 935.00 935 22 130 86 56 209 59 163 66 8 7 4 3 82 0 0 9 0 4 4 0 0 1 2 1 5 1 1 0 0 7 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGAA................................................................................................. 23 1 1 851.00 851 123 74 84 96 40 45 24 33 14 16 46 2 8 57 28 4 51 4 11 16 16 18 3 1 1 0 5 0 0 0 0 2 0 0 0 0 0 5 0 0 2 2 0 0 1 12 0 2 0 0 0 0 1 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGAT................................................................................................. 23 2 1 820.00 820 269 28 25 28 25 25 19 25 6 7 87 2 7 118 7 5 51 2 18 2 3 6 3 0 1 1 4 7 0 0 1 5 0 0 0 0 4 3 1 0 1 0 1 0 1 0 3 3 2 0 2 1 0 1 3 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGAAA............................................................................................... 25 2 2 759.50 1519 39 359 215 285 103 71 59 45 20 20 1 12 6 5 67 12 0 3 0 38 37 27 9 7 4 0 6 0 0 1 1 0 0 0 64 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGAAT............................................................................................... 25 2 2 725.50 1451 36 116 43 48 218 146 182 131 45 21 1 31 18 0 71 36 1 38 0 38 44 30 8 14 1 0 5 0 0 8 1 0 2 1 107 3 0 1 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGCAGTTTCCTGTTGTTGGG.................................................................................................. 22 1 2 718.50 1437 141 230 205 147 276 58 140 58 12 22 24 5 40 3 2 14 1 6 7 1 0 0 5 3 5 3 12 0 0 6 3 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GCATCAGAACTGGTCGGTGATT........................................................................................................................ 22 0 1 686.00 686 0 0 1 3 70 39 32 32 15 8 65 5 5 244 12 9 5 4 0 10 7 9 15 14 19 0 0 0 0 3 5 1 0 5 0 3 12 0 0 3 16 0 0 7 0 0 7 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTTTTGTTGGG.................................................................................................. 22 1 1 682.00 682 384 35 35 46 15 86 9 13 4 1 0 0 1 1 0 1 1 0 19 0 0 0 2 0 0 5 3 0 0 1 1 6 3 1 0 2 0 0 0 2 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGAGTTTCCTGTTGTTGGGA................................................................................................. 23 1 1 632.00 632 3 109 91 58 122 48 76 60 5 7 4 2 14 4 2 6 1 4 0 2 0 1 2 1 3 0 1 0 0 1 1 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTTGGT................................................................................................. 23 2 1 603.00 603 38 7 5 2 27 16 38 33 2 2 105 0 5 45 1 3 186 1 4 1 0 0 0 0 0 0 2 1 1 2 0 33 0 0 5 0 2 0 0 8 9 2 0 2 0 0 9 0 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTATTTTCCTGTTGTTGGG.................................................................................................. 22 1 1 602.00 602 390 49 41 49 16 6 17 5 2 0 2 1 0 0 0 3 0 1 0 0 0 1 1 2 0 6 3 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGTGT................................................................................................. 23 2 1 563.00 563 3 2 0 4 41 35 84 51 2 5 22 2 0 10 0 11 200 11 5 1 0 1 0 0 0 0 1 0 0 0 0 43 0 0 11 0 0 0 0 7 2 0 0 2 0 0 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTTTTGTTGG................................................................................................... 21 1 1 548.00 548 477 2 1 1 5 18 5 6 1 1 2 0 2 1 0 0 0 0 7 1 0 0 1 0 0 7 0 1 0 1 0 3 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGGTTCCTGTTGTTGGG.................................................................................................. 22 1 1 542.00 542 2 26 18 14 135 50 107 61 15 20 8 3 10 7 1 7 6 4 12 0 0 0 0 4 1 1 3 2 0 2 0 8 0 0 0 0 1 0 0 0 4 0 0 1 0 1 2 0 2 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGGTAGTTTCCTGTTGTTGGGT................................................................................................. 22 1 1 529.00 529 23 30 10 10 115 84 68 72 19 20 2 15 12 2 0 14 2 11 3 1 1 2 0 0 0 0 2 0 0 7 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CGACAGCACGACACTGCCTTCA.............................................................. 22 0 1 496.00 496 0 1 3 4 62 67 8 8 9 7 11 1 1 10 1 10 1 7 0 1 1 2 22 66 43 0 0 0 0 1 74 1 45 25 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTTTTGGG.................................................................................................. 22 1 1 495.00 495 18 38 40 32 45 39 37 61 2 7 12 2 2 6 0 4 55 6 44 0 1 1 1 1 2 1 2 2 0 1 0 18 0 0 0 0 1 0 1 4 3 0 0 0 1 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGT................................................................................................... 21 1 1 477.00 477 23 5 2 7 37 54 51 82 4 10 23 0 4 17 6 8 84 5 4 3 1 3 0 0 0 0 2 0 0 0 0 12 0 0 0 0 1 6 0 4 2 1 0 2 0 0 5 0 3 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTTGGA................................................................................................. 23 1 1 472.00 472 40 23 14 31 24 22 33 27 2 2 59 1 0 21 2 6 128 3 5 1 3 1 0 0 0 0 2 0 0 0 0 5 0 0 3 0 0 0 0 4 0 0 0 1 0 0 4 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGCTTCCTGTTGTTGGG.................................................................................................. 22 1 1 469.00 469 24 42 34 22 94 36 62 55 9 30 2 5 7 3 2 11 3 3 4 0 1 0 1 5 1 2 3 0 0 4 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGGTAGTTTCCTGTTGTTGGGA................................................................................................. 22 0 1 465.00 465 2 61 27 44 105 92 17 13 34 25 0 3 1 0 2 9 1 7 0 0 1 0 0 0 1 0 1 0 0 2 3 0 5 4 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGC................................................................................................. 23 1 2 465.00 930 83 143 75 74 119 81 83 86 22 17 18 10 19 16 4 7 1 5 9 1 6 2 5 5 5 2 9 4 4 3 1 3 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGAG................................................................................................ 24 1 1 460.00 460 11 54 39 45 55 35 46 42 15 10 0 9 9 1 22 4 0 3 1 10 14 13 6 5 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.................................................................TAGGTAGTTTCCTGTTGTTGGGTAT............................................................................................... 25 3 4 240.00 960 184 105 30 42 101 62 48 32 22 11 27 10 11 28 10 8 10 7 7 3 3 1 8 12 3 7 1 8 0 3 3 12 16 4 104 0 0 2 1 2 1 0 0 1 1 0 2 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.................................................................TAGGTAGTTTCCTGTTGTTCGG.................................................................................................. 22 1 1 211.00 211 104 10 13 11 14 11 13 4 1 4 0 2 4 0 0 0 0 0 2 0 1 1 2 1 0 4 4 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.................................................................TAGGTAGTTTCCTGTTGTTGGGATA............................................................................................... 25 1 1 195.00 195 22 31 21 28 12 20 13 6 3 4 0 1 2 1 3 6 2 2 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 7 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCCGTTGTTGGG.................................................................................................. 22 1 1 195.00 195 14 25 20 20 25 6 10 6 8 13 1 5 10 0 1 1 4 2 3 0 3 0 2 1 9 1 3 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGGTAGTTTCCTGTTGTTGGG.................................................................................................. 22 1 1 193.00 193 10 22 17 16 14 19 23 22 1 27 1 3 1 0 1 3 0 0 2 0 0 0 1 1 0 0 4 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.................................................................TAGGTAGTTTCCTGTTGTTGAGA................................................................................................. 23 1 1 42.00 42 2 3 3 1 2 2 2 1 1 14 0 0 0 0 1 1 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGTG................................................................................................ 24 2 1 41.00 41 4 9 4 5 4 2 1 2 2 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................AGTTTCCTGTTGTTGGGA................................................................................................. 18 0 1 41.00 41 0 1 2 2 8 4 3 1 0 2 0 0 0 0 6 0 0 1 0 2 1 4 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTACCTGTTGTTGGG.................................................................................................. 22 1 1 40.00 40 2 3 2 0 0 4 3 3 0 19 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................AATAGGTAGTTTCCTGTTGTTGGGA................................................................................................. 25 2 2 40.00 80 0 0 3 0 0 0 33 35 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGAGTTTCCTGTTGTTGGT.................................................................................................. 22 2 2 39.50 79 3 1 0 1 22 18 7 17 0 1 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTCGGA................................................................................................. 23 1 1 39.00 39 11 2 8 3 2 3 0 3 0 0 0 0 1 0 0 0 0 0 0 0 3 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTTGAA................................................................................................. 23 2 1 39.00 39 0 0 0 0 0 1 0 0 0 0 2 0 0 1 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGCA................................................................................................ 24 2 2 39.00 78 3 8 7 7 10 3 9 3 0 9 3 1 4 2 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAATTTCCTGTTGTTGGGA................................................................................................. 23 1 1 39.00 39 1 2 4 4 2 12 2 2 1 0 0 0 0 1 2 0 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTATTGGGA................................................................................................. 23 1 1 39.00 39 0 6 2 3 1 0 0 2 0 16 0 0 1 0 1 0 1 0 0 3 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTAGGTAGTTTCCTGTTGTTGGGA................................................................................................. 24 1 1 38.00 38 0 11 5 6 1 2 0 0 2 0 0 0 0 0 4 0 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGTAGTTTCCTGTTGTTGGGAAAT.............................................................................................. 26 3 2 38.00 76 1 1 0 1 9 7 9 11 3 4 0 0 2 0 2 1 0 5 0 3 5 3 0 0 0 0 0 0 0 2 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTCGTCGCCTCCGCCGCTCCCCGCTCCGTTGGGATGCGGGCGTCGTAGTCTTGACCAGCCACTAAATCCATCAAAGGACAACAACCCTAGGTGGAAAGAGAGCTGTCGTGCTGTGACGGAAGTAATGAAGTCAACTTTCGTAGAGGTCCATGGACAGGTCTCGTCGGGCCCTACCGATCCGCCCG
***********************************************((((((..((((((..(((((((.((.(((((((((((..........))))))))))).)).)))))))..))))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM361398
brain		 GSM361394
brain		 GSM361399
brain		 SRR073954
blood		 SRR345205
brain		 SRR345207
brain		 GSM361408
brain		 SRR042456
bone marrow		 SRR073955
blood		 SRR345201
brain		 SRR345203
brain		 SRR345197
brain		 SRR345202
brain		 SRR345198
brain		 SRR345204
brain		 SRR345200
brain		 SRR345199
brain		 SRR391850
embryo		 SRR037924
embryo		 SRR042484
salivary gland		 SRR391848
embryo		 SRR039152
muscle		 SRR391849
embryo		 SRR391852
embryo
.................................................................ATCCATCAAAGGACAACAACCC.................................................................................................. 22 0 1 282.00 282 130 76 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCT................................................................................................. 23 0 1 116.00 116 48 34 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACC................................................................................................... 21 0 1 85.00 85 47 19 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCA................................................................................................. 23 1 1 42.00 42 20 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAAC.................................................................................................... 20 0 1 18.00 18 12 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCT.................................................................................................. 22 1 1 14.00 14 3 5 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCCATCAAAGGACAACAACCC.................................................................................................. 22 1 1 12.00 12 2 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCTT................................................................................................ 24 1 1 11.00 11 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCTA................................................................................................ 24 0 1 9.00 9 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCCTCAAAGGACAACAACCC.................................................................................................. 22 1 1 9.00 9 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAACGGACAACAACCC.................................................................................................. 22 1 1 6.00 6 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCACAGGACAACAACCC.................................................................................................. 22 1 1 5.00 5 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCAA................................................................................................ 24 1 1 5.00 5 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCTC................................................................................................ 24 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCACAGGACAACAACC................................................................................................... 21 1 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAACGGACAACAACCCT................................................................................................. 23 1 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCCATCAAAGGACAACAACCCT................................................................................................. 23 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCAT................................................................................................ 24 2 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCCTCAAAGGACAACAACCCT................................................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GGATGCGGGCGT.............................................................................................................................................. 12 0 12 2.58 31 0 0 0 0 7 4 0 0 0 5 4 2 4 2 2 1 0 0 0 0 0 0 0 0
.................................................................ATCCATCACAGGACAACAACCCAA................................................................................................ 24 2 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCTA................................................................................................. 23 2 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CGTGGTCTTGACCAGCCACTAA........................................................................................................................ 22 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGGCAACAACC................................................................................................... 21 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAATGGACAACAACCC.................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAGGGACAACAACCC.................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCCAAGGACAACAACCC.................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCTC................................................................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACGACAACCC.................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ACCCATCAAAGGACAACAACCCT................................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................GTCTTGACCAGCCACTAA........................................................................................................................ 18 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATACATCAAAGGACAACAACCC.................................................................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATACATCAAAGGACAACAACCCTA................................................................................................ 24 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GTCCATCAAAGGACAACAACCC.................................................................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ACCCATCCAAGGACAACAACCC.................................................................................................. 22 2 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GGCCCTAGCGATCCGCCC. 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCAATCAAAGGACAACAACCC.................................................................................................. 22 1 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCAT................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GCTGTCGTGCTGTGACGGAAGT.............................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATTCATCAAAGGACAACAACCCT................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCCAAGGACAACAACCCT................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGCACAACAACC................................................................................................... 21 1 3 1.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACGACAACC................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAAGAACCC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAAGACAACAACCC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................ATCAAAGGACAACAACCCT................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACGACCCT................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAAACCC................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACTACAACCC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCA.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCACAGGACAACAACCCT................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCACCAAAGGACAACAACCCT................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAGAGGACAACAACCC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAGCCC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCGCCGTTGGGATGCCGGCGT.............................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCTCCGTTGGGATGTGCGC................................................................................................................................................ 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AATTTCGTAGAGGTCCATGGACAGGT.......................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCGAAGGACAACAACCC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAATCC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAATCT.................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGATAACAACC................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGCACAACAACCCTCT............................................................................................... 25 3 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGCACAACAACCC.................................................................................................. 22 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGAACAACAACCC.................................................................................................. 22 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTCCGTTGGGATGTGCGC................................................................................................................................................ 18 2 7 0.57 4 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTCCATCAACGGACAACAACCC.................................................................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CACCGTTGGGATGCGCGC................................................................................................................................................ 18 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AGCCCTAGGCGGAAACAGAGCT................................................................................. 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCATA............................................................................................... 25 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ACTGCCCGCGCCGTTGGGATGC.................................................................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CGTTGGGATGCAGGCGT.............................................................................................................................................. 17 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCAATCAAAGGACAACAACCCTA................................................................................................ 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCACCGGACAACAACCC.................................................................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATCCATCAAAGGACAACAACCCATT............................................................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................AGATCCATCAAAGTACAACAACCC.................................................................................................. 24 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTTCGTTGGGATGCGCGC................................................................................................................................................ 18 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................GTTGGGATGCGTGCGT.............................................................................................................................................. 16 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ATCCCTTGGGATGCGCGC................................................................................................................................................ 18 3 20 0.20 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GGCCATACGGATCCGCCC. 18 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GGCCCTAGGGATCCGCCC. 18 2 19 0.16 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AGCCCTAGACGGAAAGAGAGCT................................................................................. 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................GGCGTCTTAGTCGTGACCAG............................................................................................................................... 20 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTGGGCCCTACGGGTCCGCCC. 21 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TCAGTTGGGATGCGGGAGT.............................................................................................................................................. 19 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................ATCCATCAAAGCACAACGAC.................................................................................................... 20 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GGGCCATATCGATCGGCCCG 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................TTGGGTTGCGGGCGGCGT........................................................................................................................................... 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................GTTGGGATGCGGGAGT.............................................................................................................................................. 16 1 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TAGGATGCGGGCGCCGT........................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....TCGGCTCCGCCGCTCCCGG.................................................................................................................................................................. 19 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................GGTGGAAAGAGCGCT................................................................................. 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................ATCCGTTGGGATGCGGGA................................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TAGAGGTCCATGGCTAGG........................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....CGCTTCCGCCGCGCACCGCT................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................CAATGGACAGGTCTCGTGG................... 19 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GGATGCGAGCATCGTAG......................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................CTTTTGGATGCGGGCGT.............................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................GATCCGCCCG 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TAGGCGGACAGAGAGCTG................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................CTAGGTGGAAAGCGTGC.................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................GTTGGGATGCGGGGGT.............................................................................................................................................. 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GTGGGATGCGGGCGT.............................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TCCCCTTCGCCGCTCCCCG.................................................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................GGCCCTACGGATCCGCCA. 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TTGGGCTGCGGGCG............................................................................................................................................... 14 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................ATGCGGGCGT.............................................................................................................................................. 10 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CGCCCTACCGATGCGCCC. 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr6:52230031-52230215 - mmu-mir-196b CAGCAGCG---GAGGCGG------------CGAGGGGCGAGGCAACCCTACGCC--CGCAGCATCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAAGCATCTCCAGGTACCTGTCCAGAGCAGCCCGG----GATGGCTAGGCGGGC
cavPor3 scaffold_44:3907378-3907575 - gGGgGGgGGgG---GgGGgGGgGGgGGgGGgGGgGGGCGAGGCGGCCCCGCGCG--GGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGgGgGgGgGGGGggGGGgggGGg---gGGGgGGGG
dipOrd1 scaffold_676:119718-119904 - gtGgGGgt---GTGGgtG-------gGt--gtGgGAGTGAGGCAGCCCCGCGCG--GGCAGCTCCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGATACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGTGgGgGgGgGGGGGG----ggGGg-gtGGgGGGG
hetGal2 Unknown --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_522:131207-131402 - gGGgtGgGGgt---GgtG---gtGTGGgGGgGGgGGGCGAGGCAGCCCCGCGCGAGGGAAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCCGTGCGCGTGCTGGGGG-CCGGGC---CGGGCGGGG
oryCun2 chr10:11887916-11888106 - gGGgtGgGGgG---GgGG---gGGgGGgGGgGGAGGGCGAGACAGCCCCGCGCG--GGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGTGgGgGgGGGGGggG----GGg---gGGGgGGGG
rn5 chr4:146951632-146951802 - rno-mir-196b-2 CGGCAGCG---GAGGCGG------------CGAGGGGCGAG----------------GCAGCATCTGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAAGCGTCTCCAGGTACCTGTACTGAGCAGCCCGG----GGTGGCCAGGATGGC
speTri2 JH393288:3797034-3797192 - G--------------------------------------AGGGAGCCCCGCGCG--GGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGTAgGgGgGGGGGggG----GGg---gGGGgGGGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
CAGCAGCG---GAGGCGG------------CGAGGGGCGAGGCAACCCTACGCC--CGCAGCATCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAAGCATCTCCAGGTACCTGTCCAGAGCAGCCCGG----GATGGCTAGGCGGGCSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
..................................................................................TAGGTAGTTTCCTGTTGTTGGG......................................................................................................221250531.00250531020997718002781265110000000001000000010024100000001000034917372515770311697931271923676070142822168238911280130410056775024833923431534419751313013162903464733019440101000000000100007452710000100000000001731211821651118120204402340000000000005111010189000121176113185734480000000444541155110241140040121841542
..................................................................................TAGGTAGTTTCCTGTTGTTGGGA.....................................................................................................23198459.0098459021412571002310700000000000000000000000000000000000009057677020879527383300613177953756879118144149339316414190195201645422783295001367124915822703348889000000100000000010020213000000010200000119816116052391290101001000000000511680101420000110681342800000001053533471190350637335
..................................................................................TAGGTAGTTTCCTGTTGTTGG.......................................................................................................21170370.007037003210372352101010016000000000000010000000010000000000000083466585189100134974120770125132974654833118225120110508215741607178260401362450491615981021010101000001105115830000000000100000118122632511006520200011000103011500033110000037100170035811174282500000004054365105727427019051525906
..................................................................................TAGGTAGTTTCCTGTTGTTGGGT.....................................................................................................23161716.00617160012020740016814110000000000020000000001010000000000000120587739194118948615220903143147105438952239182121150948047984699699737001248202229442242878100000000000000000034520002000100010001041264317100634411210051100000005000000194000037210010139346128590000000401811722109211307231275816
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAT....................................................................................................24115328.00153280411442100900100000000000000000000000000000000000003015820353351139115992734191360167026971574319239190016472369220093721011600000000000000000000001730000000000000000210610121010000000000000000000013400003200000000331430000000100577600103104842
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAA....................................................................................................24111026.0011026000222000100100000000000000000000000000000000000001571871813538144587222693868136526253895214618392214100225172296486000000000000000000000112000000000100000000010097320000000000000000000560000000001000110220000000000112400002303123
..................................................................................TAGGTAGTTTCCTGTTGTTGGA......................................................................................................2219283.0092830625150004100200000000000000000000000100000000000006253577223223055782393536910121193337237248053200839110216431500000000000000012303092000000010000000010481040291412160001001020000000600100002120002002614513000000010134002210090120598364
..................................................................................TAGGTAGTTTCCTGTTGTTGGT......................................................................................................2214585.0045850004270008001000000000001000000000000000000000000053561104934327534754063035361273128110912667004606400100000000000010000792000000000000000018129000633300000000000000002000000011000101039104300000000101197380020100161106
..................................................................................TAGGTAGTTTCCTGTTGTTG........................................................................................................2012137.00213702010110002000000000000001000000000000000000000000021311441140155194410410918161010726211820180010513515517700020000000000000002015700000000010000000113240654100010030610130001410000000000000011310280000000020050512002022471915
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTA....................................................................................................2411508.0015080000600040000000000000000000000000000000000000000171731052722128669617510113332111963016005105810000000000000000000070000000010000000021140001020000000000000000000380000000000000012800000000000216200000002321
.....................................................................................................................TCGACAGCACGACACTGCCTTCA..................................................................2311460.00146000001000300100000000000001000000000000000000000003152732155771156148142257660561178043131010000100100000000000000000000014000000000000000001111007402000000000010000001000000000000000000000000000000000000000213158
...................................................................................AGGTAGTTTCCTGTTGTTGGG......................................................................................................2111413.001413000020000000000000000000000000000000000000000000072041872847101082684257251591214667110840000110000000000000000000002000000000000000002001005310000000000000000000000000010000000000000000000003463001000041
....................................................................................GGTAGTTTCCTGTTGTTGGG......................................................................................................2011163.001163000000000001000000000000000000000000000000000000005408126946587920668115332232530300000100000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000003415000000000
.....................................................................................................................TCGACAGCACGACACTGCCTTC...................................................................2211084.00108400030000200100000000000000000000000000000000000000101031083641544114156203821193541251152110020000000000000000000000017000000000000000000003004100000000000000000001100000000000000000000000000000100000000160160
..................................................................................TAGGTAGTTTCCTGTTGTTGGAT.....................................................................................................231820.008200301400051020000000000000000000000000000000000000025022519762525703110025282818003627400000000000000000000511000000000000000000130030030000001000000000000000000001000000117100000002022691000000287118
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAAA...................................................................................................252759.50151900006000000000000000000000000000000000000000000001312112455962071103207941002152853590003727386700000000000000000000000000000000000000000000001000000000000000000000640000100000000000000000000000390000000015
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAAT...................................................................................................252725.5014510000500000000000000000000000000000000000000000000338368311311821845146218211481121434811600044303871000000000000000000000100000000000000000000100130000000000000000000001070000000000000020000000000000360000000010
............................................................GCATCAGAACTGGTCGGTGATT............................................................................................................................221686.0068600000000100100000000000000000000000000000000000003493532325153970814151950513000079101212000000000000000000005000000000000000003716000000700000000000000000000000000000000000000000000000000000000065244
...................................................................................AGGTAGTTTCCTGTTGTTGGGT.....................................................................................................221529.0052900002000000000000000000000000000000000000000000000111471572681219841152000011010103030012100000000000000000000002000000000000000000010000100000000000000000000000000000000000000000000000000230000000022
......................................................................................................................CGACAGCACGACACTGCCTTCA..................................................................221496.004960000000010000000000000000000000000000000000000000271011881967627662243744525341000121110000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000000001110
..................................................................................TAGGTAGTTTCCTGTTGTTGT.......................................................................................................211477.00477010020001201300000000000000000000000000000000000000580082514454371000000027540013361000000000000000000008401000000000000000422000611510000000000000001000000000000000000000000000000023000000002317
...................................................................................AGGTAGTTTCCTGTTGTTGGGA.....................................................................................................221465.00465000010000000000000000000000000000000000000000000047923131713492105250013542744610001002000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000020000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGC.....................................................................................................232465.00930000090003000000000000000000000000000000000000000005731086831922811191755510075741439006214104000000000000000000100000000000000000000010101000000000000000000001000000000000000142000000000083200000001816
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAG....................................................................................................241460.004600000000000000000000000000000000000000000000000000034094246915355510564000394554100141310220000000000000000000000000000000000000000000000010000000000000000000060000000000000000000000000000110000000001
..................................................................................TAGGTAGTTTCCTGTTGTTGGGG.....................................................................................................231457.00457000110001000000000000000000000000000000000000000022208283371338504326000344946460023640000000000000000000006100000000000000000000501100000000000000000000010000000000000010200000000000411000000033
....................................................................................GGTAGTTTCCTGTTGTTGGGA.....................................................................................................211423.00423000000000000000000000000000000000000000000000000012303411416926210212000010107130000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000051000000000
....................................................................................GGTAGTTTCCTGTTGTTGG.......................................................................................................191396.003960000000000000000000000000000000000000000000000000013028106148237613300020103420000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000001384000000000
..................................................................................TAGGTAGTTTCCTGTTGT..........................................................................................................181392.0039201410200000000000000000000000000000000000000000000042016522251223121323131510191008342422000100000000000000000110000000000000000010250000000003001030000000000000000000000000001000000000005000000002622
..................................................................................TAGGTAGTTTCCTGTTGTT.........................................................................................................191382.003820100110000000000000000000000000000000000000000000120011374510945131113351100203835450000000000000000000001000000000000000000001000100000030030310010001000000000000000002240000000000094100001011111
..................................................................................TAGGTAGTTTCCTGTTGTTGGTT.....................................................................................................232379.507590000100010000000000000000000000000000000000000000112504119443812431400001081312500010010000000000000000000019000001010000000003440001011000000000000000000060000000000000100100000000000218000000007327
..................................................................................TAGGTAGTTTCCTGTTGTTGGC......................................................................................................221370.00370000010000000000000000000000000000000000000000000002504251754262010000001282531800111200000000000000000000050000000000000000000002000000000000000000000000000000000000000020000000000001381000000041
...................................................................................AGGTAGTTTCCTGTTGTTGG.......................................................................................................201341.00341000010000000000000000000000000000000000000000000011014128932867872610200236410000010000000000000000000000000000000000000000000013100000000000000000000000000000000000000200000000000470000000064
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATT...................................................................................................252335.5067101023000100000000000000000000000000000000000000004132042075967306110019420000283661100734500000000000000000000010000000000000000000020000000000000000000000000440000000000000000000000000000100000000043
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAC....................................................................................................241287.002870000100010000000000000000000000000000000000000000022053030414233312261000222137100745120000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000110000000000
....................................................................................GGTAGTTTCCTGTTGTTGGGT.....................................................................................................211281.002810000000000000000000000000000000000000000000000000010120681061731413100002085600000000000000000000000000000000000000000000000100001000000000000000000000000000100000000001000000000000120000000000
.............................................................CATCAGAACTGGTCGGTGATT............................................................................................................................211261.00261000000000000000000000000000000000000000000000000001111341311153434535413221000025360000000000000000000020000000000000000012100000010000000000000000000000000000000000000000000000000000000001147
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTAT...................................................................................................254240.0096000211000120000000000000000000000000000000000000000078310324811226210111128331643042105700313100000000000000000000001000000000000000000211200200200000000000000000001040000000000000001810000000000184700001102728
......................................................................................TAGTTTCCTGTTGTTGGG......................................................................................................181220.0022000011000000000000000000000000000000000000000000001653212120103561701000175500057540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000240000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATA...................................................................................................251195.00195000000000000000000000000000000000000000000000000012601613232012412000021283110011230000000100000000000002000000000000000000000001000000000000000000000070000000000000000000000000000220000000001
....................................................................................GGTAGTTTCCTGTTGTTGGGAA....................................................................................................221155.00155000010000000000000000000000000000000000000000000000101544671105500000002310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CGACAGCACGACACTGCCTTC...................................................................211149.00149000200000000000000000000000000000000000000000000015100010732283143915640040000000000000000000000000000200000000000000000000000100000000000000000000000000000000000000000000000000000000000056
................................................................CAGAACTGGTCGGTGATT............................................................................................................................181139.001390000000000000000000000000000000000000000000000000011003505573141410201311000144230000000000000000000000000000000000000031200000010000000000000000000000000000000000000000000000000000000001032
......................................................................................TAGTTTCCTGTTGTTGGGA.....................................................................................................191138.001380000000000000000000000000000000000000000000000000044006319212150000016460001413810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000
.....................................................................................................................TCGACAGCACGACACTGCCTTT...................................................................221136.0013600000000000000000000000000000000000000000000000000100714203216194000123000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000001919
..................................................................................TAGGTAGTTTCCTGTTGTTGA.......................................................................................................211134.001340001000000000000000000000000000000000000000000000000024200021001100023240034560000000000000000000000000000000000000000001000000000000000000000040000000000000000010300000000001650000000025
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTAA...................................................................................................253128.67386000000003000000000000000000000000000000000000000004445141891016373674405234346000111370000000000000000000007100000000000000000001002002000000000000000000045000000000000000020000000000014000000001015
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAGA...................................................................................................251126.00126000000000000000000000000000000000000000000000000001000772685320000013172210031370000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000100000000001
.....................................................................................................................TCGACAGCACGACACTGCCTT....................................................................211104.00104000000000000000000000000000000000000000000000000000001581211172301320000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000002321
...................................................................................AGGTAGTTTCCTGTTGTTGGGAT....................................................................................................23194.00940000000000000000000000000000000000000000000000000135215405202530000012790000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAAG...................................................................................................25192.00920000000000000000000000000000000000000000000000000002023524711000000045112004759000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000071000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGC.......................................................................................................21183.0083000000000000000000000000000000000000000000000000000000640142400000010010000100000000000000000000000100000000000000000000100000000000000000000000000000000000000101100000000000531000000000
.....................................................................................GTAGTTTCCTGTTGTTGGG......................................................................................................19178.00780000000000000000000000000000000000000000000000000034116164371102220015210000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000
...............................................................TCAGAACTGGTCGGTGATT............................................................................................................................19176.00760000000010000000000000000000000000000000000000000011001020310146321234000000210000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000421
......................................................................................TAGTTTCCTGTTGTTGG.......................................................................................................17171.0071000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGGA....................................................................................................24167.00670000000000000000000000000000000000000000000000000030002601127000000064171001101000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000010000000000
...................................................................................AGGTAGTTTCCTGTTGTTGGGAA....................................................................................................23164.0064000000000000000000000000000000000000000000000000002300210291440000008990000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GGTAGTTTCCTGTTGTTGGGAT....................................................................................................22162.00620000000000000000000000000000000000000000000000000010032122611110000000220000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGTA......................................................................................................22362.0018600000000110000000000000000000000100000000000000000000005200330000000001400010000000000000000000000013801000000000000000000010000000000000000000000000000000010000000000000000000010000000094
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAGT...................................................................................................25252.50105000030000000000000000000000000000000000000000000002012101204191240100006760004011000000000000000000000000000000000000000000000000000000000000000000003000000000000000011000000000050000000000
....................................................................................GGTAGTTTCCTGTTGTTGGT......................................................................................................20152.005200000000000000000000000000000000000000000000000000000111519401000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................ATCAGAACTGGTCGGTGATT............................................................................................................................20151.0051000000001000000000000000000000000000000000000000000001611030016640011100000110100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000014
.....................................................................................GTAGTTTCCTGTTGTTGG.......................................................................................................18150.0050000000000000000000000000000000000000000000000000000020371112000000000000044250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000180000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATC...................................................................................................25149.004900000000000000000000000000000000000000000000000000100223114232010006371003313000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TCGACAGCACGACACTGCCTTA...................................................................22148.00480100000000000000000000000000000000000000000000000001002302120101020000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000001515
.....................................................................................................................TCGACAGCACGACACTGCCTTCT..................................................................23148.004800000000000000000000000000000000000000000000000000120001019914202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048
.....................................................................................................................TCGACAGCACGACACTGC.......................................................................18147.00470000000000000000000000000000000000000000000000000010011303121660300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................TAGGTAGTTTCCTGTTGTTGTT......................................................................................................22344.6713400000000200100000000000000000000000000000000000000020010100188000000012110000001000000000000000000007201000000000000000230000000200000000000000000000000000000000000000000000000030000000012
..................................................................................TAGGTAGTTTCCTGTTGTTGGAG.....................................................................................................23144.0044000000000000000000000000000000000000000000000000000001211042100000022300001000000000000000000000002000000000000000000000000000000000000000000000000000000000000000100000000000160000000014
..........................................................CAGCATCAGAACTGGTCGGTGATT............................................................................................................................24144.004400000000100000000000000000000000000000000000000000000021024328351022200000002000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000012
.....................................................................................................................TCGACAGCACGACACTGCCT.....................................................................20144.004400000000000000000000000000000000000000000000000000000144013211113500000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000087
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTG....................................................................................................24141.004100000000000000000000000000000000000000000000000000010021122400000004590000001000000000000000000000100000000000000000000000000100000000000000000001000000000000000000000000000041000000010
.......................................................................................AGTTTCCTGTTGTTGGGA.....................................................................................................18141.004100000000000000000000000000000000000000000000000000100013004820003102210001426000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGCA....................................................................................................24239.0078000010000000000000000000000000000000000000000000001011394031090010007780001000000000000000000000000100000000000000000001000000000000000000000000002000000000000000000000000000030000000032
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAAAT..................................................................................................26238.0076000000000000000000000000000000000000000000000000005120119237940000000110005332000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000010000000000
cavPor3
gGGgGGgGGgG---GgGGgGGgGGgGGgGGgGGgGGGCGAGGCGGCCCCGCGCG--GGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGgGgGgGgGGGGggGGGgggGGg---gGGGgGGGGSizeHit CountTotal NormTotal
No Reads
dipOrd1
gtGgGGgt---GTGGgtG-------gGt--gtGgGAGTGAGGCAGCCCCGCGCG--GGCAGCTCCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGATACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGTGgGgGgGgGGGGGG----ggGGg-gtGGgGGGGSizeHit CountTotal NormTotal
No Reads
hetGal2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
gGGgtGgGGgt---GgtG---gtGTGGgGGgGGgGGGCGAGGCAGCCCCGCGCGAGGGAAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCCGTGCGCGTGCTGGGGG-CCGGGC---CGGGCGGGGSizeHit CountTotal NormTotal
No Reads
oryCun2
gGGgtGgGGgG---GgGG---gGGgGGgGGgGGAGGGCGAGACAGCCCCGCGCG--GGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGTGgGgGgGGGGGggG----GGg---gGGGgGGGGSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
..................................................................................TAGGTAGTTTCCTGTTGTTGGCG.....................................................................................................23112.0012120
..................................................................................TAGGTAGTTTCCTGTTGTTGGGCG....................................................................................................24211.5023230
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTCG...................................................................................................2528.5017170
..................................................................................TAGGTAGTTTCCTGTTGTTGGGACG...................................................................................................2517.00770
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATCG..................................................................................................2614.00440
..................................................................................TAGGTAGTTTCCTGTTGTTGGACG....................................................................................................2423.00660
..................................................................................TAGGTAGTTTCCTGTTGTTGGGA.....................................................................................................2313.00303
....................................................................................................................CTCGACAGCACGACACTGCCTTCG..................................................................2412.00220
..................................................................................TAGGTAGTTTCCTGTTGTTGGTCG....................................................................................................2421.50330
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAA....................................................................................................2411.00101
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCG..........................................................................................3411.00110
.....................................................................................................................TCGACAGCACGACACTGCCTTC...................................................................2211.00101
..................................................................................TAGGTAGTTTCCTGTTGTTGGGG.....................................................................................................2311.00110
...................................................................................AGGTAGTTTCCTGTTGTTGGGCG....................................................................................................2320.50110
rn5
CGGCAGCG---GAGGCGG------------CGAGGGGCGAG----------------GCAGCATCTGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAAGCGTCTCCAGGTACCTGTACTGAGCAGCCCGG----GGTGGCCAGGATGGCSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
..................................................................................TAGGTAGTTTCCTGTTGTTGGGA.....................................................................................................23316.6750000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGT.....................................................................................................23315.0045000
..................................................................................TAGGTAGTTTCCTGTTGTTGGG......................................................................................................22311.3334000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAT....................................................................................................2435.0015000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATCCG.................................................................................................2733.3310000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAA....................................................................................................2433.009000
..................................................................................TAGGTAGTTTCCTGTTGTTGG.......................................................................................................2132.678000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTCG...................................................................................................2542.5010000
..................................................................................TAGGTAGTTTCCTGTTGTTGGT......................................................................................................2242.259000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAAT...................................................................................................2541.255000
.....................................................................................................................TCGACAGCACGACACTGCCTTCA..................................................................2331.003000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTAA...................................................................................................2551.005000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTA....................................................................................................2431.003000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTAT...................................................................................................2570.715000
......................................................................................................................CGACAGCACGACACTGCCTTCAA.................................................................2330.672000
...................................................................................AGGTAGTTTCCTGTTGTTGGGA.....................................................................................................2230.672000
..................................................................................TAGGTAGTTTCCTGTTGTTGT.......................................................................................................2130.672000
..................................................................................TAGGTAGTTTCCTGTTGTTGTCG.....................................................................................................2380.383000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGTG....................................................................................................2430.331000
...................................................................................AGGTAGTTTCCTGTTGTTGG.......................................................................................................2030.331000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGG.....................................................................................................2330.331000
.....................................................................................................................TCGACAGCACGACACTGCCTTCAA.................................................................2430.331000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATCC..................................................................................................2630.331000
...................................................................................AGGTAGTTTCCTGTTGTTGGGT.....................................................................................................2230.331000
...................................................................................AGGTAGTTTCCTGTTGTTG........................................................................................................1930.331000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGATT...................................................................................................2540.251000
..................................................................................TAGGTAGTTTCCTGTTGTTGGGAGAA..................................................................................................2650.201000
..................................................................................TAGGTAGTTTCCTGTTGTTGGAT.....................................................................................................2350.201000
..................................................................................TAGGTAGTTTCCTGTTGTTGGCT.....................................................................................................2360.171000
..................................................................................TAGGTAGTTTCCTGTTGTTGTAG.....................................................................................................23180.061000
speTri2
G--------------------------------------AGGGAGCCCCGCGCG--GGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACCTGTAgGgGgGGGGGggG----GGg---gGGGgGGGGSizeHit CountTotal NormTotal
No Reads

Generated: 05/01/2015 at 12:08 AM