ID:

mmu-mir-155

 Coordinate:

chr16:84714140-84714204 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-33.8 -33.8 -33.8

Sense Strand Reads

TTGCATATCCCTTATCCTCTGGCTGCTGGAGGCTTGCTGAAGGCTGTATGCTGTTAATGCTAATTGTGATAGGGGTTTTGGCCTCTGACTGACTCCTACCTGTTAGCATTAACAGGACACAAGGCCTGTTACTAGCACTCACATGGAACAAATGGCCACCGTGGG
**************************************..(((((.....((((((((((((((.....((((((((.............))))))))...)))))))))))))).......)))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR059770
spleen		 SRR390298
fibroblast		 SRR059765
thymus		 SRR039185
fibroblast		 SRR059768
spleen		 SRR042470
lymph		 SRR553602
testes		 SRR039186
fibroblast		 SRR039183
fibroblast		 SRR039184
fibroblast		 SRR059769
spleen		 SRR390297
fibroblast		 SRR042471
spleen		 SRR059766
thymus		 SRR059767
thymus		 SRR037925
embryo		 SRR042463
spleen		 SRR037924
embryo		 SRR042473
lymph		 SRR095855BC2
heart		 SRR042487
spleen		 SRR042468
lymph		 SRR042469
lymph		 SRR042461
bone marrow		 SRR095853
heart		 SRR037929
embryo		 SRR042467
spleen		 SRR391853
embryo		 SRR391852
embryo		 SRR553584
heart		 SRR037923
embryo		 SRR065059
pancreas		 SRR042456
bone marrow		 SRR037926
embryo		 SRR095855BC1
heart		 SRR037928
embryo		 SRR391851
embryo		 SRR042465
spleen		 SRR073954
blood		 SRR553585
kidney		 SRR248527
testes		 SRR042472
lymph		 SRR065058
pancreas		 SRR042466
spleen		 SRR059771
spleen		 SRR042464
thymus		 GSM510444
brain		 SRR037927
embryo		 SRR095855BC7
heart		 SRR095855BC4
heart		 SRR042457
bone marrow		 SRR391847
embryo		 SRR040488
liver		 SRR037930
embryo		 SRR391845
embryo		 SRR391846
embryo		 SRR042475
fibroblast		 SRR042455
blood		 SRR014231
testes		 SRR095855BC5
heart		 SRR095855BC10
heart		 SRR248524
testes		 SRR553582
brain		 SRR248523
testes		 SRR037906
brain		 SRR042459
blood		 GSM475281
testes		 SRR077864
liver		 SRR095855BC8
heart		 SRR525237
Blood		 SRR037921
embryo		 SRR206941
brain		 SRR042484
salivary gland		 SRR077866
liver		 SRR042483
muscle		 SRR037905
brain		 SRR391849
embryo		 SRR525238
Blood		 SRR042462
bone marrow		 SRR391848
embryo		 SRR206942
brain		 SRR059773
spleen		 SRR553583
cerebellum		 SRR391850
embryo		 SRR037920
embryo		 SRR065053
jejunum		 SRR038744
brain		 SRR248526
testes		 SRR069834
blood		 SRR116846
epididymis		 SRR206939
brain		 SRR206940
brain		 GSM566419
fibroblast		 SRR037907
brain		 SRR248525
testes		 SRR095855BC6
heart		 SRR038741
brain		 SRR039153
muscle		 SRR039152
muscle		 SRR065054
jejunum		 SRR039154
muscle		 SRR042460
blood		 SRR032477
uterus		 SRR037901
testes		 SRR039610
brain		 SRR065052
jejunum		 SRR037902
testes		 SRR037922
embryo		 SRR037904
brain		 SRR032476
uterus		 SRR042480
kidney		 SRR042478
lung		 SRR059772
spleen		 GSM566420
fibroblast		 SRR553604
testes		 SRR037903
testes		 SRR077865
liver		 SRR042481
pancreas		 SRR065055
jejunum		 SRR095855BC3
heart		 SRR037919
embryo		 SRR042476
heart		 SRR073955
blood		 SRR553603
testes		 SRR095855BC9
heart		 SRR553586
testes		 SRR065056
jejunum		 SRR014234
ovary		 SRR037897
ovary		 SRR345204
brain		 SRR042486
ovary		 SRR069809
testes		 SRR037898
ovary		 SRR037900
testes		 SRR042477
brain		 SRR042479
liver		 SRR060845
brain		 SRR345197
brain		 SRR345201
brain		 GSM317181
brain		 GSM317182
brain		 GSM509279
testes		 SRR014236
testes		 SRR037899
ovary		 SRR065046
liver		 SRR065049
liver		 SRR065050
liver		 SRR069810
testes		 SRR069811
testes		 SRR345207
brain
.....................................................TTAATGCTAATTGTGATAGGGGT......................................................................................... 23 0 1 56794.00 56794 6605 2524 5403 3829 4756 2809 1362 3171 2403 2232 2966 2253 1410 2594 1826 1531 1212 1169 665 234 563 311 278 359 1 250 598 230 209 46 348 20 254 287 38 183 118 113 131 80 77 104 25 83 0 59 80 73 19 4 51 44 60 58 36 31 53 23 5 5 8 21 8 20 24 13 15 22 2 25 40 10 22 18 12 20 14 17 12 7 14 0 5 6 17 15 9 5 8 11 1 3 1 7 3 3 5 0 0 7 0 2 7 6 3 8 3 4 7 8 4 1 0 1 0 3 3 2 6 0 2 1 1 1 1 1 2 0 3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTT........................................................................................ 24 0 1 42446.00 42446 2777 4012 3235 4311 1438 1622 1306 3533 2611 2308 1362 1539 941 1276 963 1521 1259 1125 319 68 367 141 107 348 0 418 0 359 311 24 344 15 141 258 19 268 225 72 116 31 30 37 8 34 0 67 42 99 10 4 33 92 41 70 89 97 45 15 84 1 3 11 2 14 15 47 25 12 4 19 23 8 13 4 10 13 31 10 19 29 6 0 2 21 8 8 7 3 4 7 5 3 1 8 0 3 3 0 0 4 0 6 2 2 2 5 1 4 0 1 3 1 0 1 2 1 2 1 3 1 1 0 0 0 1 0 3 1 1 0 1 0 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 1 0
.....................................................TTAATGCTAATTGTGATAGGGG.......................................................................................... 22 0 1 36731.00 36731 2764 4795 2512 2178 1909 1452 6344 1818 1426 1374 1179 1484 791 912 845 372 240 217 297 410 299 162 164 35 0 53 232 200 201 192 84 5 42 81 165 36 128 67 60 157 182 54 8 48 0 37 19 17 40 61 20 12 13 8 4 11 14 21 0 31 28 65 42 53 11 11 3 7 17 14 6 23 10 7 10 2 3 3 3 7 5 0 24 4 2 3 3 9 7 4 9 9 1 2 8 4 7 0 0 0 0 2 1 1 2 1 0 2 2 0 0 0 0 1 3 1 0 0 0 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGG........................................................................................... 21 0 1 27047.00 27047 2598 2153 2149 2350 1620 718 2153 1881 1481 1940 1098 558 395 506 881 338 50 227 138 1054 158 70 88 9 0 68 116 79 97 343 67 2 10 54 309 57 67 29 69 66 114 30 0 22 0 18 43 24 45 112 9 14 18 16 8 7 6 12 0 41 57 33 37 30 24 2 11 12 33 6 8 22 1 10 7 12 3 0 1 1 13 0 2 2 12 2 12 11 10 4 8 5 1 2 8 4 4 0 0 1 0 1 2 3 8 1 4 2 3 0 0 0 0 1 3 4 1 0 0 3 2 0 1 2 3 0 0 2 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................TTAATGCTAATTGTGATAGGGGTTT....................................................................................... 25 0 1 9078.00 9078 826 0 646 571 311 1309 273 437 439 346 376 67 674 303 214 173 336 93 246 42 215 145 48 52 0 51 0 46 59 7 30 7 39 23 7 16 29 61 24 7 6 48 4 34 0 56 7 15 8 1 32 17 27 6 27 23 10 19 21 3 1 4 0 5 3 16 12 4 4 6 4 2 11 1 10 3 8 1 4 8 3 0 1 6 1 7 0 2 3 3 1 2 1 1 2 2 1 0 0 2 0 3 6 1 1 1 1 0 0 1 0 1 0 1 0 0 1 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGG............................................................................................ 20 0 1 7137.00 7137 786 0 377 501 599 493 573 356 255 450 339 162 256 65 190 20 12 13 111 248 82 84 64 0 0 7 11 15 14 215 7 0 0 3 171 7 16 19 6 53 35 20 0 15 0 10 36 0 85 39 0 2 2 2 5 7 0 7 0 45 45 8 26 7 16 2 15 7 31 0 2 7 3 1 2 5 0 0 0 2 3 0 1 0 1 1 5 4 1 1 3 9 1 3 4 4 5 0 0 0 0 3 0 0 1 0 1 1 3 0 0 0 0 0 2 0 2 0 1 2 0 0 2 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGA.......................................................................................... 22 1 1 5755.00 5755 1510 1 338 182 1269 194 109 174 138 126 632 24 93 118 134 14 6 9 78 76 21 20 31 1 0 2 24 22 13 62 5 6 6 0 27 0 9 24 4 26 11 22 0 24 0 1 20 0 7 12 8 0 2 2 4 0 2 1 0 12 2 0 17 1 3 0 3 19 1 2 0 6 2 13 2 2 0 0 0 1 3 0 0 0 1 1 3 0 0 0 4 3 0 2 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGA......................................................................................... 23 1 1 5154.00 5154 905 5 428 181 641 391 238 142 122 91 405 274 230 152 103 32 38 23 107 34 50 29 48 16 0 5 50 47 36 24 2 0 12 6 5 2 27 32 6 26 18 10 1 21 0 4 9 3 10 6 2 2 1 1 0 3 3 3 0 3 4 1 8 3 3 2 1 5 0 5 1 4 2 5 6 2 0 6 2 0 2 0 9 0 0 2 0 0 0 2 1 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAG............................................................................................. 19 0 1 3611.00 3611 120 0 76 37 163 992 51 27 26 38 65 4 735 9 34 3 4 2 395 8 169 141 222 1 0 0 2 1 0 18 1 0 0 3 7 1 1 68 0 3 1 56 0 22 0 20 9 1 3 0 0 2 1 1 0 1 0 23 0 3 1 2 3 0 2 8 1 0 1 0 0 1 5 1 4 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTA....................................................................................... 25 1 1 3223.00 3223 115 0 297 538 36 208 81 304 349 266 66 100 137 62 57 51 139 15 32 5 54 24 14 30 0 17 0 30 26 1 11 0 25 10 0 9 5 10 5 1 0 2 0 12 0 7 3 7 0 0 6 5 1 2 5 6 6 0 5 0 0 0 0 0 2 1 0 1 0 0 1 0 0 2 0 0 4 1 0 1 1 0 0 7 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTCCTACCTGTTAGCATTAACA................................................... 22 0 1 2906.00 2906 2 2087 0 1 5 45 42 0 0 0 1 317 41 0 1 6 63 6 57 0 26 12 15 33 0 9 29 3 5 0 0 0 34 2 0 4 5 2 3 2 1 0 0 1 0 1 2 3 0 0 1 2 0 2 1 1 11 0 0 0 0 0 0 0 0 7 1 0 0 0 2 0 1 0 0 0 0 0 2 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTTT...................................................................................... 26 0 1 2798.00 2798 75 0 74 22 53 1389 57 8 27 21 44 20 375 38 21 7 13 4 133 21 54 118 2 1 0 1 0 1 0 1 1 0 1 0 2 2 0 37 6 0 1 33 4 27 0 23 1 0 4 2 6 0 4 0 0 0 1 9 8 3 1 1 0 1 1 4 3 2 2 3 0 2 2 2 3 0 2 0 0 0 1 0 2 1 0 2 1 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTAT...................................................................................... 26 1 1 1889.00 1889 136 0 247 129 35 319 74 62 163 81 65 0 156 57 52 10 61 10 27 3 11 33 12 5 0 12 0 0 1 1 5 0 21 2 3 4 0 9 9 1 2 1 0 10 0 4 0 3 4 1 1 0 5 1 0 0 3 5 8 0 0 1 0 1 1 0 2 0 1 1 0 0 2 1 3 0 2 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATA.............................................................................................. 18 0 1 1874.00 1874 17 0 5 249 9 517 7 67 67 205 7 0 304 6 6 0 0 0 97 0 97 52 91 0 0 0 0 0 0 1 1 0 0 0 0 0 0 21 0 0 1 18 0 9 0 5 0 0 0 0 0 0 1 0 0 0 0 6 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGT......................................................................................... 23 1 1 1841.00 1841 23 1429 5 3 13 3 0 1 2 1 6 0 0 3 7 2 0 1 1 0 1 0 2 0 0 0 0 0 0 1 0 221 0 0 0 0 0 0 0 9 0 0 84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGT.......................................................................................... 22 1 1 1819.00 1819 524 0 130 34 449 26 14 26 25 28 248 1 11 61 80 6 4 8 4 39 3 9 7 0 0 4 6 2 1 3 1 0 0 0 2 2 1 7 0 3 0 4 0 3 0 2 5 0 1 1 2 0 0 1 0 3 0 1 0 0 2 0 0 0 4 0 0 3 1 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTA........................................................................................ 24 1 1 1722.00 1722 160 0 200 129 82 136 34 104 95 74 60 42 137 56 48 16 21 18 42 3 37 30 29 9 0 2 0 21 20 1 3 0 14 6 0 0 13 10 6 3 2 3 1 6 0 3 1 0 0 0 1 4 5 0 3 3 1 10 1 0 0 1 0 1 1 0 0 0 0 3 0 0 2 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CTAATTGTGATAGGGGTT........................................................................................ 18 0 1 1529.00 1529 2 1076 1 34 2 0 0 38 19 35 4 20 0 2 3 20 0 26 0 0 0 0 0 0 0 90 0 0 0 0 8 0 0 3 0 69 0 0 0 0 0 0 0 0 17 0 13 17 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTAA....................................................................................... 25 2 1 1376.00 1376 53 0 70 213 22 154 10 146 146 97 28 14 129 20 25 7 42 2 31 1 27 17 26 15 0 2 0 1 2 1 1 0 25 1 0 0 2 6 1 0 0 1 0 4 0 3 0 0 0 0 1 2 7 1 0 1 8 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTAA...................................................................................... 26 2 1 1353.00 1353 59 0 156 251 14 56 43 111 260 111 46 2 42 35 39 17 24 7 4 2 3 5 6 9 0 9 0 1 0 0 0 0 5 3 0 7 0 2 0 0 0 0 0 1 0 2 0 2 0 0 1 0 0 0 0 0 1 2 6 0 0 1 0 0 0 1 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTAT....................................................................................... 25 1 1 1218.00 1218 130 0 113 95 30 138 14 55 62 46 65 32 98 31 32 5 32 2 30 3 27 20 29 7 0 3 0 13 12 1 0 0 19 1 0 1 3 11 5 0 1 4 0 1 0 2 1 1 0 0 2 5 5 2 2 1 4 3 1 0 0 0 0 0 0 2 0 1 0 0 0 0 2 3 2 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TAATGCTAATTGTGATAGGGGTT........................................................................................ 23 0 1 793.00 793 40 0 21 66 24 60 28 67 42 53 19 28 19 16 4 15 27 15 10 1 16 4 7 4 1 11 3 5 1 0 4 0 0 3 0 5 3 0 1 1 1 1 0 3 129 1 1 2 1 0 0 2 0 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 2 0 0 1 0 11 0 1 1 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGAC........................................................................................ 24 2 1 789.00 789 4 744 2 1 0 3 1 0 0 0 0 25 3 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTTTT..................................................................................... 27 1 1 763.00 763 7 0 5 0 17 534 9 3 1 2 4 0 118 3 2 1 0 1 11 4 1 19 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 3 0 0 0 5 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGA........................................................................................... 21 1 1 604.00 604 117 0 30 26 130 1 5 21 27 28 68 6 3 9 11 2 1 1 1 46 0 1 1 0 0 0 1 2 3 10 0 0 0 0 13 1 0 0 1 3 1 0 0 1 0 0 7 0 2 1 1 0 0 0 0 0 0 0 0 1 1 0 1 0 3 0 3 0 2 0 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................TAATGCTAATTGTGATAGGGGT......................................................................................... 22 0 1 595.00 595 41 0 19 31 33 38 20 42 27 26 18 6 21 11 14 6 9 9 4 4 12 6 5 0 0 2 1 1 4 1 3 0 3 1 0 2 0 1 1 0 1 3 0 4 120 1 1 2 4 0 1 0 0 1 3 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 17 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGAT........................................................................................ 24 1 1 554.00 554 94 10 29 11 76 49 14 4 9 8 40 19 28 8 8 10 24 7 14 5 7 4 7 3 0 4 0 3 8 1 2 0 3 3 0 3 1 5 2 1 0 5 0 6 0 1 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 2 0 0 0 1 0 3 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGTGGT......................................................................................... 23 1 1 549.00 549 87 0 6 5 40 2 11 1 1 1 21 0 0 20 20 7 184 3 21 5 1 14 24 29 0 0 4 0 0 0 0 0 27 0 2 0 0 0 1 0 0 0 0 1 0 0 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGAA......................................................................................... 23 2 1 535.00 535 113 0 16 31 76 45 1 19 13 20 47 25 20 3 5 4 5 2 26 2 5 3 4 1 0 2 7 1 0 0 1 1 0 0 0 0 0 5 0 1 0 5 0 2 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 3 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTTAT..................................................................................... 27 2 1 510.00 510 27 0 54 3 8 221 19 0 8 6 15 8 44 10 15 0 3 0 9 6 2 23 0 0 0 1 0 0 0 0 0 0 3 0 0 1 0 3 0 0 0 0 0 3 0 1 0 0 1 0 0 0 1 0 0 0 2 4 4 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTTA...................................................................................... 26 1 1 494.00 494 20 0 30 27 6 125 7 13 25 11 13 0 82 7 7 4 16 1 29 2 9 18 7 2 0 3 0 0 0 0 0 0 2 0 0 0 1 4 1 0 0 2 0 5 0 2 0 0 0 0 0 0 1 0 1 0 2 3 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTT........................................................................................ 24 1 1 487.00 487 7 0 5 5 1 0 0 5 5 2 3 0 0 2 1 1 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 299 0 0 0 1 0 0 0 0 0 0 118 1 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGT........................................................................................... 21 1 1 447.00 447 133 0 21 11 115 0 0 6 4 6 55 0 0 12 16 3 0 7 4 18 0 3 7 1 0 1 2 1 0 2 0 0 3 0 1 0 0 0 0 1 0 1 0 2 0 0 2 0 1 2 0 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGTT......................................................................................... 23 1 1 414.00 414 123 0 17 8 63 2 9 4 3 7 38 2 0 36 37 16 3 15 3 2 0 2 3 1 0 1 5 1 3 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CTTAATGCTAATTGTGATAGGG........................................................................................... 22 1 1 394.00 394 0 0 1 2 1 0 0 1 3 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.....................................................TTAATGCTAATTGTGAAAGGGG.......................................................................................... 22 1 1 27.00 27 0 11 0 1 0 1 1 2 0 0 0 2 0 1 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTTAAC..................................................................................... 27 3 1 27.00 27 1 0 6 0 0 0 2 0 3 0 0 11 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGAGG.......................................................................................... 22 1 1 27.00 27 1 2 11 2 1 2 2 2 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TAATGCTAATTGTGATAG............................................................................................. 18 0 1 27.00 27 0 0 0 0 1 9 1 1 0 0 0 0 5 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCAATGCTAATTGTGATAGGG........................................................................................... 21 1 1 27.00 27 3 0 4 3 2 0 0 2 2 3 1 0 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AACGTATAGGGAATAGGAGACCGACGACCTCCGAACGACTTCCGACATACGACAATTACGATTAACACTATCCCCAAAACCGGAGACTGACTGAGGATGGACAATCGTAATTGTCCTGTGTTCCGGACAATGATCGTGAGTGTACCTTGTTTACCGGTGGCACCC
************************************..(((((.....((((((((((((((.....((((((((.............))))))))...)))))))))))))).......)))))..************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM361408
brain		 GSM361407
brain		 GSM361415
brain		 GSM361430
brain		 GSM361398
brain		 GSM361395
brain		 GSM361402
brain		 GSM361394
brain		 GSM361399
brain		 SRR039153
muscle		 SRR248526
testes		 SRR345203
brain		 SRR039152
muscle
.....................................................AATTACGATTAACACTATCCCCA......................................................................................... 23 0 1 77.00 77 31 11 11 10 6 3 3 1 1 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCAA........................................................................................ 24 0 1 76.00 76 29 3 3 5 10 10 10 3 3 0 0 0 0
.....................................................AATTACGATTAACACTATCCCC.......................................................................................... 22 0 1 55.00 55 16 4 4 1 8 4 4 7 7 0 0 0 0
.....................................................AATTACGATTAACACTATCCC........................................................................................... 21 0 1 30.00 30 15 3 3 8 1 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCAAA....................................................................................... 25 0 1 13.00 13 3 3 3 0 4 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCC............................................................................................ 20 0 1 7.00 7 3 1 1 0 0 1 1 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCAC........................................................................................ 24 1 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCC......................................................................................... 23 1 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCT.......................................................................................... 22 1 1 4.00 4 1 0 0 3 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCT......................................................................................... 23 1 1 4.00 4 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCAAT....................................................................................... 25 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCAT........................................................................................ 24 1 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCAAC....................................................................................... 25 1 1 3.00 3 0 1 1 0 1 0 0 0 0 0 0 0 0
.....................................................CATTACGATTAACACTATCCCCAAA....................................................................................... 25 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................AATTACGATTCACACTATCCCCA......................................................................................... 23 1 1 2.00 2 0 0 0 0 0 0 0 1 1 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCATT....................................................................................... 25 2 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................AATTCCGATTAACACTATCCCCAA........................................................................................ 24 1 1 2.00 2 0 0 0 0 0 0 0 1 1 0 0 0 0
.....................................................ACTTACGATTAACACTATCCCCAA........................................................................................ 24 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................AATTACGACTAACACTATCCCC.......................................................................................... 22 1 1 2.00 2 0 0 0 0 0 0 0 1 1 0 0 0 0
..................................GCTACATCCGACATACGACAATTAC.......................................................................................................... 25 3 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0
.....................................................AATTACGATTAACACTATCCCCAAAAA..................................................................................... 27 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................AATTATGATTAACACTATCCCCAA........................................................................................ 24 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................AATTACGATTAACGCTATCCCCAATA...................................................................................... 26 2 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCATA....................................................................................... 25 1 1 2.00 2 0 0 0 0 0 0 0 1 1 0 0 0 0
.....................................................AATTACGATTAACACCATCCCCAA........................................................................................ 24 1 1 2.00 2 0 0 0 0 0 0 0 1 1 0 0 0 0
.....................................................CATTACGATTAACACTATCCCCATG....................................................................................... 25 3 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................ACTTACGATTACCACTATCCCCAATA...................................................................................... 26 3 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................TATTACGATTAACACTATCCCCAA........................................................................................ 24 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCCAATA...................................................................................... 26 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0
.......................................TTCCGACATACGACGATTAC.......................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................CATTACGATTAACACTATCCCCA......................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................AATAACGATTAACACTATCCCCA......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCTA......................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCTCCA......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CATTACGATTAACACTATCCCCATC....................................................................................... 25 3 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTATCACTATCCC........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................AAATACGATTAACACTATCCCCAA........................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CATTACGATTAACACTATCCCC.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCT........................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................AATTACCATTAACACTATCCCCA......................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................AATTACGATTAACACTATCCCTT......................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................ACTTACGATTAACACTATCCCCAAA....................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AATTACTATTAACACTATCCCT.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ACGATTAGCACTATCCCC.......................................................................................... 18 1 2 1.00 2 0 0 0 0 0 0 0 1 1 0 0 0 0
........................................TCCGTCATACGACATTTACGAT....................................................................................................... 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................AATTAAGATTAACACTATCCCCATG....................................................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AATTAATATTAACACTATCCC........................................................................................... 21 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr16:84714090-84714254 + mmu-mir-155 TTGCATAT-Cccttatcct--ctggctgctggaggcttgctgaaggctgtatgctgttaatgctaattgtgataggggttttgGCCTCTGACTGACTCCTACCTGTTAGCATTAACAGGACACAAGGCCTGTTACTAGCACTCACATGGAACAAATG---GCCACCGTGGG
cavPor3 scaffold_52:7888234-7888395 - TTCTTTAT-GCCTCATCCT--ATAAGCACTGGAGGCTTGCTGTAGGCTGTATGCTGTTAATGCTAATCGTGATAGGGGTTTTTACCTCTGACTGACTCCTACATGTTAGCATTAACAGGGTATGATGCCTGTTACCAGCACTCACATGGAACAACT------TACCGTGGG
dipOrd1 scaffold_4187:15941-16103 + TTCTTTCG-TTCTCACCCT--CTGAATGCTGGAGACTTGCTGGAGGCTGTATGCTGTTAATGCTAATCGTGATAGGGGTTTTTACCTCAGACTGACTCCTACATGTTAGCATTAACAGGGTATGATGCCTGTTACCAGCACTCACATGGAACAAA-----GCTGCCTGGGG
hetGal2 Unknown ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 scaffold_1436:59367-59529 + TTCCTCAGGGCCACATCC----TGACTGCTGGAGGCTTGCTGAGGGCTGTACGCTGTTAATGCTAATCGTGATAGGGGTTT-TACCTCCAGCTGACTCCTACATGTTAGCATTAACAGGGTATGGTGCCTATTACTGGCATTCATGTGGAGCGCAGT---GCTGCCGTGGG
oryCun2 chr14:154700563-154700728 + TTCTTTCATGCCTCATCCT--TTGAACACTGGAAGTCTGCTGTAGGCTGTATGCTGTTAATGCTAATCGTGATAGGGGTTTTTACCTCCAACTGACTCCTACATGTTAGCATTAACAGGGTATGACGCCTCTTACTAGCTTTCACGTGGAACACAGT---GCCGCCGTGGG
rn5 chr11:27810306-27810475 + rno-mir-155 TTGCTTAT-CCCTTATCCTGTCTGGCTGCTGGAGGCTTGCTGAAGGCTGTATGCTGTTAATGCTAATTGTGATAGGGGTTTTGGCCTCTGACTGACTCCTACCTGTTAGCATTAACAGGATACAGTGCCTGTTACTAGCATTCACGTGGAACAAATGGCCGCCGCCGTGGG
speTri2 Unknown ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
TTGCATAT-Cccttatcct--ctggctgctggaggcttgctgaaggctgtatgctgttaatgctaattgtgataggggttttgGCCTCTGACTGACTCCTACCTGTTAGCATTAACAGGACACAAGGCCTGTTACTAGCACTCACATGGAACAAATG---GCCACCGTGGGSizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
........................................................TTAATGCTAATTGTGATAGGGGT............................................................................................23156794.005679423132813111725254513591200000000000807202475930013101400000000000021740434811691531287731832505836314471461182092301111240322323829317153225325242211388234045319218157624600000010223181311278280910466500012003000225200121211383598141056347562966660500015005000263300000020213577000000085468013621015954032594182687
........................................................TTAATGCTAATTGTGATAGGGGTT...........................................................................................24142446.0042446154764116010191413334819110000000004201315837211538600000000000018234344112515212589926841870899792293121225311359711261123084311353345153940121300193681413104158433341000000012241141107162237319000101011011815012597234094136714381362277700025018400002110000011411033000000002224311306020673235127696312
........................................................TTAATGCTAATTGTGATAGGGG.............................................................................................22136731.003673121112760131442203530000000000019221127320099235000000000000126284217372811736538411127341282012004111426137421781818141484479510101652841016131440170130000130000000707016216414525429700010000000085024067482327912991909117927640003000000010100000053658918200000004224192157634433037251291284501
........................................................TTAATGCTAATTGTGATAGGG..............................................................................................21127047.002704712211069106109910000000000043312242412800852213000000000001212826722733854245768168714132679779411148119402350188165582153100309571054311241445333121000180000000121100708871830138000720120000205029221163951581620109825980001100000013440000003033811114000000037234366215323018214950688102
........................................................TTAATGCTAATTGTGATAGGGGTTT..........................................................................................2519078.0090781916332401639325240000000000070331101001223000000000000014030931732315165162723178862959463114393465714371067011207142013284017201027000000041111454813094824600010000000047033661340674215311376826000120021000011000000054226000000001772730015664630321416
........................................................TTAATGCTAATTGTGATAGG...............................................................................................2017137.00713772316200000000000000000363516355100397300000000000001217132030772572200161415110255450501356016203001714524823945485310010100200000007210846449320111000200000000001219151125682599339786000150000000010000000784435000000026121553573222103776519000
........................................................TTAATGCTAATTGTGATAGGGA.............................................................................................2215755.0057551000400268100000000000020023203010436300000000000001005914000224001009132200013812618217422412002727611212171111000020000001190130203119422780002000000006062424249321126963215100003000000000000000010001100000001706226109010133811813401
........................................................TTAATGCTAATTGTGATAGGGGA............................................................................................2315154.005154320060651221620000000000090231100001042000000000000101022332632510320002736472001229118114232745200543406311000021000100000005050294839110107000600000041003832215023050641405905000100000001200000003110180000000892426238000442815210300
........................................................TTAATGCTAATTGTGATAG................................................................................................1913611.00361123830000000100000000000090025000000011000000000000010012331101012000101000263837270405007180030310000000100000000010141222992563950004000000000046822273516916365120000100000000000000000210100000003018351010207693400
........................................................TTAATGCTAATTGTGATAGGGGTTA..........................................................................................2513223.003223010151102563000000000000030020010000001000000000000001011155110791725651475263000034926653830461000000005000000001100010000000102024142082320000000000000013910120137543666115000000500000000000000000000000000011810007297625700
...............................................................................................CTCCTACCTGTTAGCATTAACA......................................................2212906.0029060710300034133200000000000200000000000000000000000000021066234921123015530000010113172087100000000000000000100000000000012154505700000000000000632129412651200010000000000000100000010000000010242000100100
........................................................TTAATGCTAATTGTGATAGGGGTTTT.........................................................................................2612798.00279894006003161000000000000100100100000210000000000000000147002100000210010102721228120020021210230420021001400000002021118213893313300030000000400133727037554534475000300800000000000001111100000000210570002374382101
........................................................TTAATGCTAATTGTGATA.................................................................................................1811874.0018746410000000000000000000000000000000000000000000000000010000000000000000000672052496700000000000000000000001000000000005291517189700010000000000021903049797170000000000000000000000001000000010107010556600
........................................................TTAATGCTAATTGTGATAGGGT.............................................................................................2211819.00181910000000020000000000000502410100000100000000000000000186002410300001121112528342601010022392100110110101000000003010972644000000000000004736113449248524000000000000000000000000000000000033140002130618010
........................................................TTAATGCTAATTGTGATAGGGGTA...........................................................................................2411722.00172210000602314192000000000001001000000000000000000000000003181660020334100132021000957412910414202000030000000002000500000000010302913634200000000000100211060137378260160000000100000000000001100200000000013340003200564810
..............................................................CTAATTGTGATAGGGGTT...........................................................................................1811529.001529000000000000000000000001312020000000000000000000001251826203176990131000000000001935343802010760000000000000000000000000000000000000000000000000000000024217100000000000100000000000000000000000000012300
........................................................TTAATGCTAATTGTGATAGGGGTAA..........................................................................................2511376.0013761000100025115200000000000000000000000000000000000000000127100210120002210001469721314681402000010000000010000700000000011172615413100000000000000426401292722285300010010000000000000000100000000001010000370202500
........................................................TTAATGCTAATTGTGATAGGGGTTAA.........................................................................................2611353.0013532100000051900000000000000000000000000000000000000000007173279000001100100026011125111112000000200000000000000000000000205656040000000000000024210423144659000100600000000001000100000000000000430002156353901
.........................................................TAATGCTAATTGTGATAGGGGTT...........................................................................................231793.00793000010000040000000000001001000001000000000000000001004151532511100212131501142536667228000100100021000000000000000000104760110000000000000002703319162419401292110000000000000000000001000000000012800012116400
........................................................TTAATGCTAATTGTGATAGGGGAC...........................................................................................241789.0078900000000100000000000000000000000000000000000000000000000100000000000100000010025744000000000000000000000000000000000302000000000000000000300040000000000000000000000000000000000001000021000
........................................................TTAATGCTAATTGTGATAGGGGTTTTT........................................................................................271763.00763000000100200000000000000000000000001000000000000000000110000000000000001012030001001040010000000000000000000000190534511000000000001000300118117470001001000000000000000000000000000109000053210
........................................................TTAATGCTAATTGTGATAGGA..............................................................................................211604.006040000100001000000000000070030001002001020002000000000001200100000000032000272826210600001314601102200000000000000000301110100000000000000101130130681170003000000000000000000001000000010103500003091100
.........................................................TAATGCTAATTGTGATAGGGGT............................................................................................221595.005950000100031000000000000010020100000000000000000000010039612221300010041010272631420600000140000400002000000000000010653834000000000000009141211233184112031700000000020000000000010000000001020000119111400
........................................................TTAATGCTAATTGTGATAGGGAA............................................................................................231535.00535000000100010000000000005003000000000000000000500000001240102000000000100013203119025011001200100000010000000000011003445526000000001000105527205764711300000000000000000000000000000000000110001163500
........................................................TTAATGCTAATTGTGATAGGGGTTTAT........................................................................................271510.00510400000003000000000000000001000000000000000000000000000000011000000000001086302800000060000110000000100000000000230221090000000000000033304428152700010040000000000000000000000000100019000154101500
........................................................TTAATGCTAATTGTGATAGGGGTTTA.........................................................................................261494.00494300010012020000000000000010000000001100000000000000000140003010000010000025112713200000002000000000000010000000001018712522900000000000000164508296132000010000000000000000000000000000000070002307700
........................................................TTAATGCTAATTGTGATAGGT..............................................................................................211447.00447100000003011000000000002001000000000000000000000000000730001000000000100046116000000111802101000000000000000000103701400000000000000002200115551330000000000000000000000000000000000210000021121600
.........................................................TAATGCTAATTGTGATAGGG..............................................................................................201386.00386000010000000000000000000000000000000000000000000001000221010010000010001023383941014000213522012211300000000000000001000212002000000000000000102103131221231100000000000000000110010000000003019000081300
........................................................TTAATGCTAATTGTGATAGGGGAA...........................................................................................241379.003790000100021100000000000000010000000000000000000000000008400200000000431000218371612200000010000100000000000000002000375811400010000000120611036118183600000000000000000010000000000000000070002148600
.........................................................TAATGCTAATTGTGATAGGGG.............................................................................................211373.0037310003000000000000000000100000000000100000000000000000001001100000002020001022332703200015090730900100000000000000000432112000010000000001111769820303600000000000000000100020000000002155000183300
........................................................TTAATGCTAATTGTGATAGGGGTAG..........................................................................................251316.00316000020003011000000000000000000000000000000000000010001000211000000000100012192514000000000010000000000000000000000001100000000000000003000002590000001000000000000000001000000000111770000233300
.........................................................TAATGCTAATTGTGATAGGGGTTT..........................................................................................241304.003041000100112100000000000000000000000000000000000000000006400422200000010000111316120000020000000310000000100000000000615811100010000000100621025761313310160000000000000000000000000000000005000155200
........................................................TTAATGCTAATTGTGATAGGGGC............................................................................................231272.0027201001000001000000000000201000000000000000000000000000110241113000000020100018121515017400000200000000000000000000010000018110000000000000050012120142700000000000000000000000000000000000080000287500
........................................................TTAATGCTAATTGTGATAGGGGTTAG.........................................................................................261239.002390000100000000000000000010000000000100000000000000000038830220000000000010117177024000000000000000000000000000000000110000000000000000100010146000000100000000000000101000000000000920000271500
.............................................................GCTAATTGTGATAGGGGTT...........................................................................................191228.00228000000000000000000000001001000000000000000000000000000210134001500000000030546658000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.............................................................GCTAATTGTGATAGGGGT............................................................................................181199.00199000000000000000000000001000000000000000000000000000000010010000000000000030625141000000000000000000000000000000000010100000000000000000000006010000000000000000000000000000000000000000011100
........................................................TTAATGCTAATTGTGATAGGGGTTAGA........................................................................................271195.0019500000000000000000000000000000000000000000000000000000143000310000000000004001016000000000000000000001000000000000010000000000000000000000053000000000000000000000010000000000000139000092100
........................................................TTAATGCTAATTGTGATAGGGGG............................................................................................231195.0019501000000308000000000000000000000000000000000000000000132010030113000013010112203000000501000000100001000000000001011010000000000000013204241291300000000000100000000000000000000000060000422500
........................................................TTAATGCTAATTGTGATAGGGGTTG..........................................................................................251188.001880000000010200000000000010000000000000000000000000000000610011000010233010202035200000000000000000000000000000000000109000000000000000050001252700000010000000000000000000000000000060000208300
........................................................TTAATGCTAATTGTGATAGGGGTTAAT........................................................................................271187.00187000000000100000000000000000000000000000000000000000002350225100000000001114270000000001000000000000010000000000020140000000000000000410030513110000001000000000000000000000000000002900003881000
........................................................TTAATGCTAATTGTGATAGGGGTAAA.........................................................................................261171.0017100002000202000000000000000000000000000000000000000000010000000000000000001583040201000000000000000000000000000000202104000000000000006210160458000000100000000000000000000000000001110000162310
.........................................................TAATGCTAATTGTGATAGG...............................................................................................191155.0015500000000000000000000000000000000000000000000000000000000100100000000000001022146000000904050112010000000000000000002214010000000000000000004244641000000000000000000010000000000106112000031000
........................................................TTAATGCTAATTGTGATAGGGGTTAAA........................................................................................271153.0015300000000101000000000000100000000000000000000000000000225002600000000000001448200000000100000000000000000000000001070100000000000200201090558000000000000000000000000000000000000100000377900
...............................................................................................CTCCTACCTGTTAGCATTAAC.......................................................211147.0014703001000400000000000000000100000000000000000000000000273003000001001010000010210000000000000000000000000000000009101709000000000000002021071501100020000000100000100020020000000101013000010000
........................................................TTAATGCTAATTGTGATAGGGGTTTAA........................................................................................271141.001410000000050000000000000000000000000000000000000000000013310000000000000000122420000001000000000000000000000000000512503000000000000004010190311000010020000000000000000000000000000040000221500
........................................................TTAATGCTAATTGTGATAGGGGTAGA.........................................................................................261132.00132000000003020000000000000000000000000000000000000000002100000000000000000031030000000000000000000000000000000000000000000000000000040000002300000000000000000000100030000000100393000042100
........................................................TTAATGCTAATTGTGATAGGGGTTC..........................................................................................251109.0010900000000103000000000000000000000000000000000000000000010010110000000010101156809000000000000000000001000000000001060000000000000000101010661300000000000000000000000000000000000010001145300
........................................................TTAATGCTAATTGTGATAGGGGTTTTA........................................................................................271103.001030000100000000000000000000000000000000000000000000000010100000000000000000200005010000200000100000000000000000004046040000000000000000201801220000000000000000000000000000000000000000071200
........................................................TTAATGCTAATTGTGATAGGGGTC...........................................................................................241100.0010000000000000000000000000000000000000000000000000000000063101010000000000001229201000000000000000000000000000000000010100000000000000700001931100000000000000000000000000000000000000000168500
........................................................TTAATGCTAATTGTGATAGGGGTG...........................................................................................24195.009500000000000000000000000000000000000000000000000000000014200200000000300005561500000000000000000000001000000000000230000000000000000102002033500000000000000000000000000000000000050001131100
........................................................TTAATGCTAATTGTGATAGGGC.............................................................................................22194.00940000000000000000000000000000000000000000000000000000000010011100000010000431400000000201000000000000000000000000000000001000000000000000532100000000000000000000000040000000000028000083100
........................................................TTAATGCTAATTGTGATAGGGAG............................................................................................23190.0090100000001100000000000000000000000000000000000000000000010000000000000100011010000000000000000000000000000000000028010000000000000001001016122300000000000000000000000000000000000213000021000
........................................................TTAATGCTAATTGTGATAGGGGTTTTAT.......................................................................................28182.0082000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000214200000000000000000000104490000002000000000000000000000000000006000061200
........................................................TTAATGCTAATTGTGATAGGGGTTTAAT.......................................................................................28177.00770000100000000000000000000010000000001000000000000000021100000000000000010000010000000000000000000000000000000002070000000000000000000000232000000100000000000000000000000000000230000195400
........................................................TTAATGCTAATTGTGATAGGGTA............................................................................................23177.007700000000000000000000000000000000000000000000000000000001000000000000010003101000000000000000000000000000000000001102000000000000001110201812190000000000000000000000000000000000001000052400
..............................................................CTAATTGTGATAGGGGTTT..........................................................................................19176.0076000000000000000000000002002000000000000000000000000100220191830000000000007755060000000000000000000000000000000000000000000000000000000000023000000000000000000000000000000000000000001000
.........................................................TAATGCTAATTGTGATAGGGGTTA..........................................................................................24173.00730000000000100000000000000000000000000000000000000000000011120101000000000671010000000001000000000000000000000000000800000000000000000010131325010000000000000000000000000000000004000020000
........................................................TTAATGCTAATTGTGATAGGGGTTGA.........................................................................................26172.007200000000100000000000000000000000000000000000000000000013101100000000000001035400000000000000000000000000000000000000000000000000000510011150000000000000000000000000000000000001110000114100
........................................................TTAATGCTAATTGTGATAGGGGTAAG.........................................................................................26161.0061000000000010000000000000000000000000000000000000000000010102000000000001141200000000000000000000000000000000000105010000000000000011002002200000000000000000000000010000000000024000041200
........................................................TTAATGCTAATTGTGATAGGGGTTTATT.......................................................................................28160.00600000000000000000000000000000000000000000000000000000002000100000000000000000000000000000000000000000000000000001024010000000000000000004022100000000000000000000000000000000000015000050200
..........................................................AATGCTAATTGTGATAGGGGT............................................................................................21160.0060000000100010000000000000000000000000000000000000000001311000000000000000023480100000000000000000000000000000000011101000000000000001000102152000000000000000000000000000000000006000021000
.........................................................TAATGCTAATTGTGATAGGGGTTTT.........................................................................................25159.0059000000000100000000000000000000000000000000000000000000000000000000000000010200000011000010000000000000000000000102201000000000000000000710069120000000000000000000000000000000001000100000
........................................................TTAATGCTAATTGTGATAGT...............................................................................................20257.50115000000000000000000000002000000000001000000000000000000000000000000000000000010000002140010220000000000000000000105107000000000000003000001911310000000000000000000000000000000000310000021500
........................................................TTAATGCTAATTGTGATAGGGGTAC..........................................................................................25156.0056000000001010000000000000000000000000000000000000000001000000000000000000091670000000000000000000000000000000000006000000000000000020002121000000000000000000000000000000000000030000101200
..........................................................AATGCTAATTGTGATAGGGGTT...........................................................................................22156.0056010000000000000000000000000000000000000000000000000001221000000001001000024412000000000000000000000000000000000000301000000000000000001420124001000000000000000000001000000000001000022000
........................................................TTAATGCTAATTGTGATAGGGGTTAC.........................................................................................26154.005400000000000000000000000000000000000000000000000000000001000000000000000111211040000000000000000000000000000000000103000000000000000010000010200000000000000000000000000000000000020000111200
........................................................TTAATGCTAATTGTGATAGGGGTTTTTT.......................................................................................28148.0048000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402700000000000000000000701020000000000000000000000000000000000004000000210
...........................................................ATGCTAATTGTGATAGGGGT............................................................................................20146.0046000000000000000000000000000000000000000000000000000000240000000000000001045710000000000000000000000000000000000000001000000000000000000003420000000000000000000000000000000000000000001200
........................................................TTAATGCTAATTGTGATAGGGGTGA..........................................................................................25146.0046000000000000000000000000000000000000000000000000000000110000000001010000050104000000000000000000000000000000000000200000000000000001000032120000002000000000000000000000000000000000063100
.............................................................GCTAATTGTGATAGGGGTTT..........................................................................................20144.00440000000000000000000000000000000000000000000000000000001000000110001000000714107000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000
.........................................................TAATGCTAATTGTGATAGGGGA............................................................................................22243.0086000010000000000000000000000000000000000000000000000000010101000000000000024630100010000000000000000000000000000018020000000000000011006293416200000000000000000000000000000000204000012100
.........................................................TAATGCTAATTGTGATAGGGA.............................................................................................21139.003900000000000000000000000000000000000000000000000000000000000000000000000001522030000100000010000000000000000001012500000000000000000010114222000000000000000000000000000000000001000000100
..............................................................CTAATTGTGATAGGGGT............................................................................................17139.0039000000000000000000000000000000000000000000000000000000000000000000000000000000390000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATTGTGATAGGGGTTT..........................................................................................18139.003900000000000000000000000100000000000000000000000000000202101300000000000004785000000000000000000000000000000000000000000000000000000000001211000000000000000000000000000000000000000000000
.........................................................TAATGCTAATTGTGATAGGGGTAG..........................................................................................24138.0038000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000035000000000
...........................................................ATGCTAATTGTGATAGGGGTT...........................................................................................21138.003800000000000000000000000000000000000000000000000000000034010000010000000003794000000000000000000000010000000000000000000000000000000001101100000000000000000000000000000000000000000010000
........................................................TTAATGCTAATTGTGATAGGGGAAA..........................................................................................25335.3310600000000002000000000000000000000000000000000000000000010000000000000110009714801000000000000000020000000000000003313020000000000000012001205660000000000000000000000000000000000004000003000
.........................................................TAATGCTAATTGTGATAGGGGTTAA.........................................................................................25135.003500000000001000000000000000000000000000000000000000000101000000000000000004185000000000000000000000000000000000000200000000000000001000000116000001000000000000000000000000000002000000000
........................................................TTAATGCTAATTGTGATAGGGGTTTTAA.......................................................................................28132.003200000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001010300000000000000000000000350001001000000000000000000000000000003000063400
.........................................................TAATGCTAATTGTGATAGGGGTA...........................................................................................23131.003100000000100000000000000000000000000000000000000000000000000000000000000001314030000000000000000000000000000100000201000000000000000000310024000000000000000000000000000000000002000020000
............................................................TGCTAATTGTGATAGGGGTT...........................................................................................20130.0030000000000000000000000000000000000000000000000000000000000000000000000000031377000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CTAATTGTGATAGGGGTTA..........................................................................................19229.5059000000000000000000000000000000000000000000000000000000110146200000000000091587030000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000
........................................................TTAATGCTAATTGTGATAGGGGTTTC.........................................................................................26128.002800000000000000000000000000000000000000000000000000000000000000000000000002230000000000000000000000000000000100000900000100000000000000300130000000000000000000000000000000000000000010200
...............................................................................................CTCCTACCTGTTAGCATTAACC......................................................22127.002700000000602000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000000000000030011000000000000001000320000000000000000000000000000000000000004000010000
........................................................TTAATGCTAATTGTGATAGGGGTTAAC........................................................................................27127.0027000000000000000000000000000000000000000000000000000000000000000000000000030000110000001000000000000000000000000010000000000000000000000000010000000000000000000000000000000000002000060200
.........................................................TAATGCTAATTGTGATAG................................................................................................18127.002700000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000002911000000000000000000501005100000000000000000000000000000000001000000000
cavPor3
TTCTTTAT-GCCTCATCCT--ATAAGCACTGGAGGCTTGCTGTAGGCTGTATGCTGTTAATGCTAATCGTGATAGGGGTTTTTACCTCTGACTGACTCCTACATGTTAGCATTAACAGGGTATGATGCCTGTTACCAGCACTCACATGGAACAACT------TACCGTGGGSizeHit CountTotal NormTotal
No Reads
dipOrd1
TTCTTTCG-TTCTCACCCT--CTGAATGCTGGAGACTTGCTGGAGGCTGTATGCTGTTAATGCTAATCGTGATAGGGGTTTTTACCTCAGACTGACTCCTACATGTTAGCATTAACAGGGTATGATGCCTGTTACCAGCACTCACATGGAACAAA-----GCTGCCTGGGGSizeHit CountTotal NormTotal
No Reads
hetGal2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
TTCCTCAGGGCCACATCC----TGACTGCTGGAGGCTTGCTGAGGGCTGTACGCTGTTAATGCTAATCGTGATAGGGGTTT-TACCTCCAGCTGACTCCTACATGTTAGCATTAACAGGGTATGGTGCCTATTACTGGCATTCATGTGGAGCGCAGT---GCTGCCGTGGGSizeHit CountTotal NormTotal
No Reads
oryCun2
TTCTTTCATGCCTCATCCT--TTGAACACTGGAAGTCTGCTGTAGGCTGTATGCTGTTAATGCTAATCGTGATAGGGGTTTTTACCTCCAACTGACTCCTACATGTTAGCATTAACAGGGTATGACGCCTCTTACTAGCTTTCACGTGGAACACAGT---GCCGCCGTGGGSizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
........................................................TTAATGCTAATCGTGATAGGGGTTT..........................................................................................2518.00808
........................................................TTAATGCTAATCGTGATAGGGGT............................................................................................2315.00505
........................................................TTAATGCTAATCGTGATAGGGGTT...........................................................................................2413.00303
........................................................TTAATGCTAATCGTGATAGGGGTTTT.........................................................................................2613.00303
........................................................TTAATGCTAATCGTGATAGGGGTTTTAT.......................................................................................2811.00101
.........................................................TAATGCTAATCGTGATAGGGGTT...........................................................................................2311.00101
........................................................TTAATGCTAATCGTGATAGGG..............................................................................................2111.00101
.........................................................TAATGCTAATCGTGATAGGGGTTT..........................................................................................2411.00101
.........................................................TAATGCTAATCGTGATAGGGA.............................................................................................2111.00101
........................................................TTAATGCTAATCGTGATAGGGGTA...........................................................................................2411.00101
........................................................TTAATGCTAATCGTGATAGGGGTTTTTA.......................................................................................2811.00101
........................................................TTAATGCTAATCGTGATAGGGGTCG..........................................................................................2511.00110
...........................................................ATGCTAATCGTGATAGGGGCG...........................................................................................2120.50110
........................................................TTAATGCTAATCGTGATAGGGGTTTTTTTT.....................................................................................3020.50101
rn5
TTGCTTAT-CCCTTATCCTGTCTGGCTGCTGGAGGCTTGCTGAAGGCTGTATGCTGTTAATGCTAATTGTGATAGGGGTTTTGGCCTCTGACTGACTCCTACCTGTTAGCATTAACAGGATACAGTGCCTGTTACTAGCATTCACGTGGAACAAATGGCCGCCGCCGTGGGSizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
........................................................TTAATGCTAATTGTGATAGGGGTTT..........................................................................................251201.00201000
........................................................TTAATGCTAATTGTGATAGGGGTT...........................................................................................241166.00166000
........................................................TTAATGCTAATTGTGATAGGGGT............................................................................................23183.0083000
........................................................TTAATGCTAATTGTGATAGGGGTTTT.........................................................................................26174.0074000
........................................................TTAATGCTAATTGTGATAGGGGTTAA.........................................................................................26144.0044000
........................................................TTAATGCTAATTGTGATAGGGGTTA..........................................................................................25142.0042000
........................................................TTAATGCTAATTGTGATAGGGGTTTTT........................................................................................27118.0018000
........................................................TTAATGCTAATTGTGATAGGGGTAA..........................................................................................25118.0018000
........................................................TTAATGCTAATTGTGATAGGGGTTTA.........................................................................................26112.0012000
........................................................TTAATGCTAATTGTGATAGGGGTA...........................................................................................24111.0011000
........................................................TTAATGCTAATTGTGATAGGGGTTAAA........................................................................................27110.0010000
.........................................................TAATGCTAATTGTGATAGGGGTT...........................................................................................23110.0010000
........................................................TTAATGCTAATTGTGATAGGGGTTTAT........................................................................................2717.007000
.........................................................TAATGCTAATTGTGATAGGGGTTT..........................................................................................2416.006000
........................................................TTAATGCTAATTGTGATAGGGGTTTAA........................................................................................2716.006000
.........................................................TAATGCTAATTGTGATAGGGGT............................................................................................2216.006000
........................................................TTAATGCTAATTGTGATAGGGG.............................................................................................2215.005000
........................................................TTAATGCTAATTGTGATAGGGGTTTTAT.......................................................................................2815.005000
.........................................................TAATGCTAATTGTGATAGGGGTTTT.........................................................................................2515.005000
........................................................TTAATGCTAATTGTGATAGGGGA............................................................................................2315.005000
.........................................................TAATGCTAATTGTGATAGGGGTTAA.........................................................................................2513.003000
........................................................TTAATGCTAATTGTGATAGGGGTTTAAA.......................................................................................2813.003000
........................................................TTAATGCTAATTGTGATAGGGGTTTTGA.......................................................................................2813.003000
........................................................TTAATGCTAATTGTGATAGGGGTTGA.........................................................................................2612.002000
........................................................TTAATGCTAATTGTGATAGGGGTTAC.........................................................................................2612.002000
.........................................................TAATGCTAATTGTGATAGGGGTTTTT........................................................................................2612.002000
........................................................TTAATGCTAATTGTGATAGGGA.............................................................................................2212.002000
............................................................TGCTAATTGTGATAGGGGTT...........................................................................................2012.002000
........................................................TTAATGCTAATTGTGATAGGGGTTTTAAA......................................................................................2912.002000
.......................................................GTTAATGCTAATTGTGATAGGGGTTA..........................................................................................2612.002000
..........................................................AATGCTAATTGTGATAGGGGTT...........................................................................................2212.002000
........................................................TTAATGCTAATTGTGATAGGGGTTTTTT.......................................................................................2812.002000
........................................................TTAATGCTAATTGTGATAGGGGTTTTAA.......................................................................................2812.002000
.........................................................TAATGCTAATTGTGATAGGGGTTAAT........................................................................................2612.002000
........................................................TTAATGCTAATTGTGATAGGGGTTAAT........................................................................................2711.001000
........................................................TTAATGCTAATTGTGATAGGGGTTTAAT.......................................................................................2811.001000
........................................................TTAATGCTAATTGTGATAGG...............................................................................................2011.001000
........................................................TTAATGCTAATTGTGATAGGGGTG...........................................................................................2411.001000
...........................................................ATGCTAATTGTGATAGGGGTTT..........................................................................................2211.001000
...........................................................ATGCTAATTGTGATAGGGGTTTT.........................................................................................2311.001000
.........................................................TAATGCTAATTGTGATAGGGGTAA..........................................................................................2411.001000
........................................................TTAATGCTAATTGTGATAGGGGTTTACT.......................................................................................2811.001000
........................................................TTAATGCTAATTGTGATAGGGGTTTC.........................................................................................2611.001000
.........................................................TAATGCTAATTGTGATAGGGGTTTAT........................................................................................2611.001000
........................................................TTAATGCTAATTGTGATAGGGGAA...........................................................................................2411.001000
........................................................TTAATGCTAATTGTGATAGGGGTAAA.........................................................................................2611.001000
........................................................TTAATGCTAATTGTGATAGGGGC............................................................................................2311.001000
.........................................................TAATGCTAATTGTGATAGGGGTTTGT........................................................................................2611.001000
........................................................TTAATGCTAATTGTGATAGGGGTTTGT........................................................................................2711.001000
........................................................TTAATGCTAATTGTGATAGGGGAAG..........................................................................................2520.501000
........................................................TTAATGCTAATTGTGATAGGGGAAA..........................................................................................2530.331000
............................................................TGCTAATTGTGATAGGGGTTTTTTT......................................................................................2530.331000
speTri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 04/30/2015 at 08:13 PM