ID:

mmu-mir-133a-1

 Coordinate:

chr18:10782909-10782976 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-37.8
mature
  1. chr18:10782912-10782933 -
  2. chr2:180398438-180398459 +
star
  1. chr18:10782950-10782971 -
  2. chr2:180398400-180398421 +

Sense Strand Reads

AAAAGAGCATTTAACCTGTTTGGATCCTACACCAGCAGCGGCAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACACATGGACAGCCAGTGTTTTATGAGCATGAATTACA
****************************************.((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))))))...************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR095855BC7
heart		 SRR095853
heart		 SRR553584
heart		 SRR095855BC1
heart		 SRR039154
muscle		 SRR095855BC2
heart		 SRR095855BC5
heart		 SRR039153
muscle		 SRR039152
muscle		 SRR095855BC3
heart		 SRR095855BC10
heart		 SRR095855BC6
heart		 SRR095855BC8
heart		 SRR391848
embryo		 SRR077864
liver		 SRR042483
muscle		 SRR391852
embryo		 SRR391851
embryo		 SRR391853
embryo		 SRR095855BC4
heart		 SRR391850
embryo		 SRR391846
embryo		 SRR037921
embryo		 SRR391847
embryo		 SRR095855BC9
heart		 SRR391849
embryo		 SRR037920
embryo		 GSM510444
brain		 SRR206942
brain		 SRR042476
heart		 SRR206941
brain		 SRR391845
embryo		 SRR040488
liver		 SRR116846
epididymis		 SRR037922
embryo		 SRR037906
brain		 SRR037905
brain		 SRR553583
cerebellum		 SRR206940
brain		 SRR032476
uterus		 SRR037897
ovary		 SRR077866
liver		 SRR038744
brain		 SRR037919
embryo		 SRR037898
ovary		 SRR042482
skin		 SRR032477
uterus		 SRR206939
brain		 SRR037901
testes		 SRR039610
brain		 SRR038741
brain		 GSM475281
testes		 SRR037902
testes		 SRR037929
embryo		 SRR039185
fibroblast		 SRR037907
brain		 SRR553582
brain		 SRR248525
testes		 SRR042478
lung		 SRR037928
embryo		 SRR037904
brain		 SRR042486
ovary		 SRR039186
fibroblast		 SRR037925
embryo		 SRR037924
embryo		 SRR039183
fibroblast		 SRR014231
testes		 SRR037899
ovary		 SRR248526
testes		 SRR037927
embryo		 SRR042477
brain		 SRR065058
pancreas		 SRR039184
fibroblast		 SRR553602
testes		 SRR553586
testes		 SRR077865
liver		 SRR042484
salivary gland		 SRR037923
embryo		 SRR014234
ovary		 SRR037903
testes		 SRR345205
brain		 SRR065059
pancreas		 SRR037900
testes		 SRR345197
brain		 SRR553585
kidney		 SRR037930
embryo		 SRR248524
testes		 SRR069834
blood		 SRR042462
bone marrow		 SRR345201
brain		 SRR345202
brain		 SRR037926
embryo		 SRR042481
pancreas		 SRR345198
brain		 SRR065056
jejunum		 SRR345200
brain		 SRR069809
testes		 SRR069810
testes		 SRR248523
testes		 SRR525238
Blood		 SRR345207
brain		 SRR051940
testes		 SRR065055
jejunum		 SRR042471
spleen		 SRR059769
spleen		 SRR073955
blood		 SRR042470
lymph		 GSM317181
brain		 SRR059765
thymus		 SRR345196
brain		 GSM509275
testes		 SRR042475
fibroblast		 SRR069811
testes		 SRR042480
kidney		 SRR065053
jejunum		 SRR345203
brain		 SRR345204
brain		 SRR345206
brain		 SRR525237
Blood		 GSM317182
brain		 SRR037896
ovary		 SRR345199
brain		 GSM509279
testes		 SRR042456
bone marrow		 SRR042463
spleen		 SRR059766
thymus		 SRR059767
thymus		 SRR553603
testes		 SRR042466
spleen		 SRR014235
testes		 SRR014236
testes		 SRR042461
bone marrow		 SRR042467
spleen		 SRR042485
testes		 SRR060845
brain		 SRR065047
liver		 SRR065054
jejunum		 SRR073954
blood
.............................................................................................TTGGTCCCCTTCAACCAGCTGT..................................................... 22 0 2 20803.50 41607 4805 17 3224 3697 4628 3475 3359 2780 2301 1284 1454 1087 964 667 931 474 295 331 276 542 384 354 189 320 364 172 164 198 510 133 399 172 165 137 44 62 50 62 109 90 68 87 91 24 42 40 37 38 17 38 31 21 10 15 33 10 11 31 15 17 10 14 23 5 6 24 1 8 2 3 6 17 11 8 11 10 1 2 4 6 2 8 3 0 2 5 7 4 6 1 2 1 3 0 1 0 3 3 1 4 2 1 3 3 2 3 0 0 1 0 1 1 1 0 2 0 0 2 0 0 2 0 0 2 2 2 2 1 0 0 0 0 1 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGCTGT..................................................... 23 0 2 11644.50 23289 2860 1 1964 1826 2244 1784 1821 1445 1233 613 674 629 652 278 663 266 242 255 216 374 160 157 205 135 257 61 178 201 221 78 223 77 179 116 37 56 71 53 67 51 63 56 45 26 55 18 19 18 23 20 22 13 16 23 20 14 10 15 10 11 14 9 16 13 13 10 6 7 3 8 2 3 9 5 2 4 2 4 3 1 5 2 3 0 1 0 1 3 1 0 0 2 2 0 1 0 1 0 1 0 0 3 1 1 1 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................TTTGGTCCCCTTCAACCAGCTG...................................................... 22 0 2 6925.00 13850 2164 0 482 372 1701 339 341 674 641 133 277 67 130 428 34 324 986 980 896 60 260 183 338 131 36 127 290 246 75 12 85 111 81 47 97 62 70 29 23 35 41 5 27 45 24 20 21 9 30 15 13 5 30 24 3 10 7 8 5 19 14 6 1 15 20 0 0 5 1 7 1 0 0 1 3 0 4 10 2 5 0 0 6 1 0 4 1 0 1 0 0 4 1 0 1 0 1 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGA..................................................... 22 1 2 4611.00 9222 1388 4 456 1592 203 1193 1198 122 85 539 789 383 141 44 126 27 109 88 82 206 21 30 43 20 22 12 44 37 18 5 27 17 6 9 10 9 7 18 5 17 17 3 1 2 10 2 3 1 2 0 0 3 1 0 1 3 1 2 1 0 3 0 0 3 1 1 0 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCAAAT........................................................................................... 22 0 2 4507.00 9014 544 0 655 565 645 451 448 653 674 615 68 299 237 558 65 466 66 43 55 64 269 198 57 207 15 306 56 20 1 383 3 153 5 0 16 8 5 1 0 7 1 5 1 6 1 16 8 0 5 0 1 10 3 1 0 3 0 1 13 1 1 8 0 0 0 0 0 0 1 2 6 1 0 0 1 0 6 0 0 0 6 4 0 0 1 0 0 0 0 0 2 0 0 3 1 0 0 1 0 0 3 0 1 0 0 1 0 0 0 0 0 0 0 0 1 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0
............................................................................................CTTGGTCCCCTTCAACCAGCTGT..................................................... 23 1 2 3094.00 6188 9 6129 3 1 6 1 3 5 4 1 0 0 0 5 1 0 0 1 0 0 2 6 0 4 0 1 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGCTGA..................................................... 23 1 2 3002.00 6004 432 2 480 640 606 436 418 199 203 130 335 104 73 94 94 37 321 256 235 63 40 60 112 38 10 29 67 80 27 12 25 19 10 20 20 22 30 27 11 27 14 7 5 13 12 6 14 4 5 0 2 0 3 6 5 5 5 3 3 2 2 2 6 6 3 1 2 2 2 3 2 0 1 1 0 0 0 2 0 1 0 1 2 0 1 1 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTG...................................................... 21 0 2 2837.00 5674 1053 4 202 225 807 194 235 276 229 124 167 54 44 211 9 151 261 236 243 34 126 85 67 94 12 53 64 57 42 2 31 56 5 13 20 16 20 4 6 6 11 1 8 11 8 10 10 3 5 1 6 8 5 4 0 5 2 4 2 5 4 1 1 4 4 0 0 1 0 1 0 2 0 0 1 1 2 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTT.................................................... 23 1 2 2299.00 4598 597 7 494 455 181 571 462 180 156 185 407 113 109 9 236 21 7 8 4 87 9 10 2 8 87 4 2 1 52 15 27 1 6 13 1 0 0 3 13 2 0 19 5 0 1 0 0 2 0 3 5 3 0 0 3 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCAAA............................................................................................ 21 0 2 2157.00 4314 352 0 554 381 114 292 287 123 142 372 40 185 164 317 13 44 47 22 34 35 178 64 57 82 7 157 56 6 2 37 2 63 4 0 16 0 0 1 0 2 1 3 0 10 0 0 0 0 1 1 0 1 2 2 0 0 3 2 1 2 0 2 0 2 1 0 0 0 9 2 2 0 0 0 0 0 1 0 0 1 0 1 0 5 0 1 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGC........................................................ 20 0 3 2014.00 6042 803 1 1032 948 117 666 674 68 57 167 199 183 323 29 4 30 15 23 27 115 9 20 34 17 64 7 26 79 36 1 30 9 2 24 9 29 24 10 17 2 5 0 23 5 3 2 1 12 0 10 13 2 1 2 0 7 10 2 0 0 5 1 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGCT....................................................... 21 0 3 1664.33 4993 165 1 100 123 735 131 120 475 415 39 44 49 75 236 80 188 108 158 237 16 75 54 167 27 3 49 151 262 34 6 21 49 94 19 46 83 80 6 14 8 6 7 11 19 5 11 4 3 17 9 8 12 12 4 18 21 3 1 0 7 13 3 14 0 0 4 0 0 0 2 0 1 5 1 0 1 0 0 4 4 1 0 1 0 0 0 2 3 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 5 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTAG................................................... 24 0 2 1558.00 3116 275 0 1186 324 13 324 351 4 10 156 81 44 37 3 0 1 8 4 6 91 1 1 1 0 73 1 3 2 15 1 9 3 0 13 0 2 0 22 16 1 0 0 0 0 0 0 0 11 0 0 1 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTTGGTCCCCTTCAACCAGCTGTT.................................................... 24 2 2 1441.00 2882 0 2881 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CTTTGGTCCCCTTCAACCAGCTGT..................................................... 24 1 2 1392.00 2784 0 2775 1 0 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TGGTCCCCTTCAACCAGCTGT..................................................... 21 0 2 1368.50 2737 696 33 103 141 217 284 120 105 89 58 95 166 67 91 20 27 9 15 11 54 51 30 11 30 15 28 9 3 32 3 13 19 24 4 2 2 4 1 7 2 2 5 11 4 1 1 2 2 1 4 0 1 1 1 1 1 0 0 0 3 0 0 1 1 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTA.................................................... 23 0 2 1356.00 2712 331 0 409 319 198 253 264 151 122 88 93 60 44 21 56 1 28 33 20 33 16 3 8 9 16 5 9 3 23 9 16 6 3 9 0 1 2 13 5 5 3 7 1 0 2 0 0 1 0 2 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCAAATC.......................................................................................... 23 0 2 1136.00 2272 242 0 437 196 36 172 177 26 34 218 32 130 97 86 7 61 13 3 11 27 51 27 10 34 2 41 8 2 1 35 1 27 0 0 4 1 0 1 1 0 0 1 0 3 0 1 0 1 0 0 1 0 0 0 0 0 3 0 2 0 2 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTTT................................................... 24 2 2 1087.50 2175 372 1 101 286 30 389 302 18 26 109 99 77 53 0 60 5 2 0 0 69 1 0 0 1 100 0 0 0 10 16 14 1 0 5 0 0 0 0 10 4 0 7 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTAT................................................... 24 1 2 992.00 1984 305 0 489 224 67 205 198 53 51 80 52 73 37 3 24 1 3 1 3 34 1 4 1 1 16 3 1 0 6 15 12 1 0 1 0 0 0 1 5 2 0 1 0 0 1 1 2 2 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTAA................................................... 24 1 2 966.50 1933 207 0 422 210 145 172 162 95 96 70 48 39 28 19 26 8 13 6 5 21 12 11 2 7 10 9 5 7 8 8 11 8 0 5 0 1 1 5 2 5 4 1 0 0 0 0 2 1 0 0 0 1 0 0 0 0 2 1 0 0 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCAA............................................................................................. 20 0 2 813.50 1627 67 0 86 53 127 52 47 126 114 46 6 38 23 279 11 60 15 15 19 3 138 29 23 57 0 92 14 3 0 9 0 21 0 1 6 0 0 0 1 1 0 2 0 4 0 0 3 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 7 4 0 0 2 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................TTGGTCCCCTTCAACCAGC........................................................ 19 0 3 674.67 2024 346 3 142 402 83 287 203 34 22 83 70 70 56 8 1 24 1 2 7 34 3 8 7 15 32 2 7 7 15 0 14 4 0 3 0 1 2 0 4 0 0 0 2 3 1 1 1 0 0 0 4 2 0 1 0 0 1 2 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTTGGTCCCCTTCAACCAGCTGTTT................................................... 25 3 2 659.00 1318 0 1315 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCA.............................................................................................. 19 0 2 647.50 1295 154 0 262 243 5 112 119 3 3 182 14 81 55 5 6 2 0 2 4 16 2 5 1 4 2 3 1 1 1 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGCTGTT.................................................... 24 1 2 618.50 1237 192 3 170 106 30 173 117 43 24 36 91 39 40 0 42 2 12 9 5 30 5 1 1 1 25 1 1 1 10 2 1 1 0 6 0 0 0 0 3 0 0 5 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCT....................................................... 20 0 3 482.33 1447 47 1 26 42 375 30 27 200 152 16 9 18 11 54 9 178 19 15 14 9 20 17 16 8 4 16 11 14 3 0 10 2 6 1 1 5 5 0 1 2 6 1 2 0 0 7 1 0 0 2 0 11 0 1 1 2 0 0 0 0 2 2 1 0 1 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGCTGTAG................................................... 25 0 2 412.00 824 84 0 333 94 1 70 72 0 0 46 20 16 11 0 0 0 3 3 6 19 0 1 1 0 12 1 0 0 1 0 3 0 0 1 0 0 0 10 3 0 0 0 2 0 1 0 0 2 0 1 0 0 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGCTGTA.................................................... 24 0 2 410.00 820 111 0 139 61 49 62 70 48 40 31 14 26 22 13 13 0 29 25 9 10 4 2 5 1 0 2 1 6 6 2 4 1 1 1 2 2 1 1 2 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GCTGGTAAAATGGAACCAAATC.......................................................................................... 22 0 2 404.50 809 65 1 118 45 16 14 10 16 21 37 12 3 17 80 0 22 18 10 15 4 66 37 3 42 4 57 6 0 1 9 1 32 2 0 1 0 0 1 2 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 3 1 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................TTTGGTCCCCTTCAACCAGCTGTATCTCTT.............................................. 30 3 1 401.00 401 104 0 0 67 0 50 48 0 0 31 22 28 28 0 0 0 0 0 0 17 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTAGA.................................................. 25 1 2 358.50 717 70 0 222 83 0 94 95 2 0 36 26 12 11 0 0 0 4 3 1 19 1 0 0 2 25 0 2 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CTTTGGTCCCCTTCAACCAGC........................................................ 21 1 3 341.67 1025 0 1023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CTTTGGTCCCCTTCAACCAGCTG...................................................... 23 1 2 339.00 678 0 662 0 0 3 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 2 3 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTTGGTCCCCTTCAACCAGCTG...................................................... 22 1 2 328.50 657 2 635 0 0 3 0 0 1 0 0 1 0 1 0 0 1 0 5 0 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CTGGTCCCCTTCAACCAGCTGT..................................................... 22 1 2 327.50 655 4 614 0 3 4 1 0 2 4 2 1 2 1 0 2 0 1 0 1 2 1 4 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCAAT............................................................................................ 21 1 2 325.00 650 82 0 116 97 11 67 74 8 10 69 6 45 30 8 1 10 0 0 0 7 1 0 0 0 0 1 0 1 0 4 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GCTGGTAAAATGGAACCAAAT........................................................................................... 21 0 2 311.00 622 48 0 22 8 47 7 4 38 44 10 1 3 2 97 3 55 8 4 3 1 50 17 1 38 0 48 11 1 0 17 0 15 0 0 1 1 0 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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............................................................................................TTTGGTCCCCTTCAACCAGCTGAA.................................................... 24 1 2 94.00 188 3 0 4 8 40 2 1 8 8 0 6 3 1 3 0 2 18 14 12 1 3 12 9 2 0 4 6 3 1 3 0 1 1 1 0 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.............................................................................................TTGGTCCCCTTCAACCAGCTGAA.................................................... 23 1 2 88.50 177 10 0 9 14 21 13 5 9 14 6 17 3 0 6 1 1 8 5 3 4 4 3 1 2 0 0 2 1 0 2 0 1 0 0 1 1 1 1 0 2 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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............................................................................................CTTGGACCCCTTCAACCAGCTGT..................................................... 23 2 2 15.50 31 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCCGT..................................................... 22 1 2 15.50 31 4 1 1 2 3 1 0 4 0 2 3 0 1 0 3 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTAAACCAGCTGT..................................................... 22 1 2 15.50 31 9 0 0 4 2 4 4 2 1 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTTGGTCCCCTTCAACCAGCTGC..................................................... 23 2 3 15.33 46 1 42 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCCACCCGCTGT..................................................... 22 2 2 15.00 30 0 0 0 0 5 2 1 3 16 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTTAACCAGCTGT..................................................... 23 1 2 15.00 30 4 0 2 0 6 1 1 5 1 1 1 1 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CTTTGGTCCCCTTCAACCAG......................................................... 20 1 4 15.00 60 0 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCAAC............................................................................................ 21 1 2 15.00 30 3 0 4 4 0 6 0 3 1 3 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATCTGGTAAAATGGAACCAAAT........................................................................................... 22 1 2 15.00 30 1 0 5 4 0 5 4 3 0 3 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGGAG................................................... 24 1 2 15.00 30 3 0 1 6 0 6 3 0 0 2 2 1 0 0 0 0 0 0 0 3 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGATCCCCTTCAACCAGCTGT..................................................... 23 1 2 15.00 30 0 0 4 3 4 2 2 3 4 1 1 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACAAAAT........................................................................................... 22 1 2 15.00 30 4 0 1 5 0 3 2 3 0 4 1 4 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTAGAT................................................. 26 1 2 15.00 30 3 0 11 2 0 2 8 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATCTGGTAAAATGGAACCAAA............................................................................................ 21 1 3 14.67 44 2 0 12 11 1 4 4 0 3 2 0 2 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCTTTGGTCCCCTTCAACCAGCTGT..................................................... 25 2 2 14.50 29 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 6 6 0 0 0 0 0 0 2 0 1 0 0 0 3 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCACCCCGCTGT..................................................... 22 2 2 14.50 29 3 0 0 0 4 2 1 9 7 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAACCAGTTGT..................................................... 23 1 2 14.50 29 2 0 2 3 1 2 3 2 1 1 0 0 3 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GTTGGTCCCCTTCAACCAGCTGT..................................................... 23 1 2 14.50 29 9 0 0 4 1 1 0 0 1 3 1 4 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TGTTCCCCTTCAACCAGCTGT..................................................... 21 1 2 14.50 29 7 0 10 4 0 3 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTTGTCCCCTTCAACCAGC........................................................ 19 1 4 14.50 58 6 1 27 2 0 7 5 0 0 1 3 1 1 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTTGA.................................................. 25 2 2 14.50 29 5 0 9 2 0 6 2 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCACTTCAACCAGCTG...................................................... 22 1 2 14.00 28 5 0 1 0 9 0 0 7 2 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCGCCTTCAACCAGCTGT..................................................... 22 1 2 14.00 28 4 0 0 5 1 4 5 0 5 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTGTCCCCTTCAACCAGCTGTAA................................................... 23 2 2 14.00 28 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTGGTCCCCTTCAAACAGCTGT..................................................... 23 1 2 14.00 28 0 0 2 1 0 0 2 4 1 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTCGTCCCCTTCAACCAGCTGA..................................................... 22 2 2 14.00 28 0 0 26 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTCT..................................................... 22 1 2 14.00 28 1 0 1 0 7 2 0 5 5 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAGCTGTTG................................................... 24 1 2 13.50 27 5 0 10 3 0 1 3 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGCTGGTAAAATGGAACCAAATTT......................................................................................... 24 2 2 13.50 27 2 0 4 4 1 1 2 0 0 4 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTGGTCCCCTTCAACCAACTGT..................................................... 22 1 2 13.50 27 4 0 0 3 1 3 3 2 0 2 0 2 1 0 0 0 0 0 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTTCTCGTAAATTGGACAAACCTAGGATGTGGTCGTCGCCGTTACGAAACGATTTCGACCATTTTACCTTGGTTTAGCGGAGAAGTTACCTAAACCAGGGGAAGTTGGTCGACATCGATACGTAACTAATGTGTACCTGTCGGTCACAAAATACTCGTACTTAATGT
**************************************.((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))))))...**************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM361407
brain		 GSM361415
brain		 GSM361430
brain		 SRR073954
blood		 GSM361408
brain		 SRR038744
brain		 SRR391849
embryo		 SRR039154
muscle		 SRR059765
thymus		 SRR039153
muscle		 SRR040488
liver		 SRR059773
spleen		 SRR345198
brain		 SRR095855BC5
heart		 GSM361398
brain		 SRR073955
blood		 SRR345197
brain		 SRR345202
brain		 SRR391845
embryo		 SRR525237
Blood		 SRR345201
brain		 SRR059766
thymus		 SRR095855BC3
heart		 SRR037920
embryo		 SRR095853
heart		 SRR345205
brain		 SRR391847
embryo		 SRR525238
Blood		 SRR553582
brain		 SRR553584
heart		 SRR553585
kidney
............................................................................................AAACCAGGGGAAGTTGGTCGA....................................................... 21 0 3 2.00 6 1 1 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAGTTGGTCGAC...................................................... 22 0 2 2.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTACCTTGGTTTAGCGG....................................................................................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAGTTGGTCG........................................................ 20 0 3 1.00 3 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TAAATTGGACAAACCTAGGA............................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCCGGGGAAGTTGGTCGACC..................................................... 23 2 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCGACCATTTTACCTTGGTTT............................................................................................ 21 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAACCTAGGATGTGCTC..................................................................................................................................... 17 1 4 0.75 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAGTTGGTCGC....................................................... 21 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CAACCAGGGGAAGTTGGTCGA....................................................... 21 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAGTTGGTCGATATTT.................................................. 26 3 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CCAAGGGTGTGGTCGTCGCCGGTA........................................................................................................................... 24 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TAACCAGGGGAAGTTGGTCGAC...................................................... 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACAAGGGGAAGTTGGTCGACAA.................................................... 24 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GATGTGGTCGCCGCC............................................................................................................................... 15 1 20 0.50 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 1 0 1 1 1 1 1
........................................................CGACCATTTTACCTTGGTTT............................................................................................ 20 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CGACCATCTTACCTTGGTT............................................................................................. 19 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AACCAGGGGAAGTTGGTCGATAT.................................................... 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GGGACGTTGGTCGACAGCGA................................................. 20 2 6 0.33 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACAAGGGGAAGTTGGTCGA....................................................... 21 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAGCTGGTCGA....................................................... 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAGTTGGTCGATA..................................................... 23 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACAAGGGGAAGTTGGTCG........................................................ 20 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCGGGGGAAGTTGGTCGA....................................................... 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAACCTAGGATGGGGTCG.................................................................................................................................... 18 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCGTCCATTTTACCTTGGTTT............................................................................................ 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TTCGACCAACTTACCTTGGTT............................................................................................. 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAAACAGGTGAAGTTGGTCGA....................................................... 21 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACGAGGGGAAGTTGGTC......................................................... 19 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTTCGACCATTTTATGCTGGTTT............................................................................................ 23 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTTCGACCATCTTACGATGGTTT............................................................................................ 23 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GTCGACCATTTTACCATGGTTT............................................................................................ 22 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................ATGTCGACCATCTTACCATGGTTT............................................................................................ 24 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAAATGGTCGA....................................................... 21 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCGGTCGTCGCCGTGGCGAA....................................................................................................................... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCGACCAATTTACCCTGGTT............................................................................................. 20 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GTCGACCATTTTGCCATGGTTT............................................................................................ 22 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TGGTCGTCGCCTTTAGGAA....................................................................................................................... 19 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GGGGACGTCGGTCGACATCGA................................................. 21 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................ACAAAGCTAGGAGGTGGTC..................................................................................................................................... 19 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................CGACCATCTTACCCTGGTTT............................................................................................ 20 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TAAACCAGGGGAAATGGGTCGT....................................................... 22 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTTCGACCATCTTCCCATGGTT............................................................................................. 22 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................GGGGGCGTTGGTCGACAGCGA................................................. 21 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGCAGTTGGG.......................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AGGGGAAGTTGG........................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................GCAAACCTAGGATGTGCGC..................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAACCAGGGGAAGTGCGT.......................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........TAAATTGGACAA.................................................................................................................................................... 12 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GTCGACCATTTTCCCATGGTTT............................................................................................ 22 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TGGCTGTCGGTCACAAAAT............... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
mm10 chr18:10782859-10783026 - mmu-mir-133a-1 AAAA---GAGCATTTAACCTGTT-TGGATCCTACACCAGCAGCG------GCAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACACATGGACAGCCAGTGTTTTATGAGCATGAATTACA
cavPor3 Unknown AAACGAA-ATCACTGATTTGTCC-TGGGTCCCAAACCAGCAGCAC----TACAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTTCTGCAGGAGAGCCAGCACTTTATTATTATCAATTATA
dipOrd1 Unknown ATAT--------TTTAACTGTTT-TGGATCCCAAACTAGCAGCAC----TACAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGATAGCCAACGTTTTGTGAATATCAATTATA
hetGal2 Unknown ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ochPri2 Unknown AA-CGAAAATAATATAAATGTTTCTGGATTCCAAACTAGCAGCACTCCATACAATGCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTTAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGACAGCTAATGTTTTAAGGATGTCAA----A
oryCun2 Unknown AAATGAAAAGCATTTAACTGTTT-TGGATTCCAAACTAACAGCAC----TACAATGCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGACAGCCAACATTTTATGAATGTCAATCACA
rn5 chr18:2085417-2085584 - rno-mir-133a AAATG---AGCATAGAACTTGTT-TGGATCCTAAACCAGCAGCG------GCAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTGCCACAGGACAGCCAGCGCTCTGTGAATGTGAGTTACA
speTri2 Unknown AAATGAAAAGCATTTAACCGTTT-TGGATCCCAAACTGGCAGCAC----TACAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGAGAGACGACGGTTCATGAATATCAGTTACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
mm10
AAAA---GAGCATTTAACCTGTT-TGGATCCTACACCAGCAGCG------GCAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACACATGGACAGCCAGTGTTTTATGAGCATGAATTACASizeHit CountTotal NormTotalSRR042455
blood		SRR042459
blood		SRR042460
blood		SRR069834
blood		SRR073954
blood		SRR073955
blood		SRR525238
Blood		SRR525237
Blood		SRR042456
bone marrow		SRR042457
bone marrow		SRR042461
bone marrow		SRR042462
bone marrow		GSM317181
brain		GSM317182
brain		GSM361394
brain		GSM361395
brain		GSM361398
brain		GSM361399
brain		GSM361402
brain		GSM361407
brain		GSM361408
brain		GSM361415
brain		GSM361430
brain		GSM510444
brain		SRR037904
brain		SRR037905
brain		SRR037906
brain		SRR037907
brain		SRR038741
brain		SRR038744
brain		SRR039610
brain		SRR042477
brain		SRR060845
brain		SRR206939
brain		SRR206940
brain		SRR206941
brain		SRR206942
brain		SRR345196
brain		SRR345197
brain		SRR345198
brain		SRR345199
brain		SRR345200
brain		SRR345201
brain		SRR345202
brain		SRR345203
brain		SRR345204
brain		SRR345205
brain		SRR345206
brain		SRR345207
brain		SRR037919
embryo		SRR037920
embryo		SRR037921
embryo		SRR037922
embryo		SRR037923
embryo		SRR037924
embryo		SRR037925
embryo		SRR037926
embryo		SRR037927
embryo		SRR037928
embryo		SRR037929
embryo		SRR037930
embryo		SRR391845
embryo		SRR391846
embryo		SRR391847
embryo		SRR391848
embryo		SRR391849
embryo		SRR391850
embryo		SRR391851
embryo		SRR391852
embryo		SRR391853
embryo		SRR116846
epididymis		GSM566419
fibroblast		GSM566420
fibroblast		SRR039183
fibroblast		SRR039184
fibroblast		SRR039185
fibroblast		SRR039186
fibroblast		SRR042475
fibroblast		SRR390297
fibroblast		SRR390298
fibroblast		SRR042484
salivary gland		SRR042476
heart		SRR095853
heart		SRR095855BC1
heart		SRR095855BC10
heart		SRR095855BC2
heart		SRR095855BC3
heart		SRR095855BC4
heart		SRR095855BC5
heart		SRR095855BC6
heart		SRR095855BC7
heart		SRR095855BC8
heart		SRR095855BC9
heart		SRR065052
jejunum		SRR065053
jejunum		SRR065054
jejunum		SRR065055
jejunum		SRR065056
jejunum		SRR042480
kidney		SRR040488
liver		SRR042479
liver		SRR065045
liver		SRR065046
liver		SRR065047
liver		SRR065048
liver		SRR065049
liver		SRR065050
liver		SRR077864
liver		SRR077865
liver		SRR077866
liver		SRR042478
lung		SRR042468
lymph		SRR042469
lymph		SRR042470
lymph		SRR042472
lymph		SRR042473
lymph		SRR039152
muscle		SRR039153
muscle		SRR039154
muscle		SRR042483
muscle		SRR014234
ovary		SRR037896
ovary		SRR037897
ovary		SRR037898
ovary		SRR037899
ovary		SRR042486
ovary		SRR042481
pancreas		SRR065058
pancreas		SRR065059
pancreas		SRR042482
skin		SRR042463
spleen		SRR042465
spleen		SRR042466
spleen		SRR042467
spleen		SRR042471
spleen		SRR042487
spleen		SRR059768
spleen		SRR059769
spleen		SRR059770
spleen		SRR059771
spleen		SRR059772
spleen		SRR059773
spleen		GSM475281
testes		GSM509275
testes		GSM509279
testes		SRR014231
testes		SRR014235
testes		SRR014236
testes		SRR028731
testes		SRR037900
testes		SRR037901
testes		SRR037902
testes		SRR037903
testes		SRR042485
testes		SRR051939
testes		SRR051940
testes		SRR069809
testes		SRR069810
testes		SRR069811
testes		SRR248523
testes		SRR248524
testes		SRR248525
testes		SRR248526
testes		SRR248527
testes		SRR363956
testes		SRR363957
testes		SRR363958
testes		SRR363959
testes		SRR363960
testes		SRR363963
testes		SRR363964
testes		SRR553582
brain		SRR553583
cerebellum		SRR553584
heart		SRR553585
kidney		SRR553602
testes		SRR553603
testes		SRR553604
testes		SRR553586
testes		SRR042464
thymus		SRR059765
thymus		SRR059766
thymus		SRR059767
thymus		SRR032476
uterus		SRR032477
uterus
.......................................................................................................TTGGTCCCCTTCAACCAGCTGT.....................................................22220803.50416070004034020060000000000019810506210319138603810939951000000120022224164189442651317155172354320667172384331295276137002411332310011331736971454347512845423359108748059643640203101650000000931108715000002301278046284744268428143178402001300200002110100031710600133117312000000001162322428101101229037
......................................................................................................TTTGGTCCCCTTCAACCAGCTGT.....................................................23211644.502328900031000000100000000000201147156142245202018672232210000000005002617820537413132811230771571352786116025524221611600109201620027811826674178461337418216292860652257000110179000000066345610000001233144522442663063557923218000010010000130160003231610031001115300000000105319641500202005119
......................................................................................................TTTGGTCCCCTTCAACCAGCTG......................................................2226925.0013850000000000001010000000002461470621013271510923857501000000000145290338971020154719244111183131428127260980986896470000310004120372277339133603416721641303600001081000000034055000006416741701324204124561002000001000000050000006303050011101181000000007294820110300003521
.......................................................................................................TTGGTCCCCTTCAACCAGCTGA.....................................................2224611.0092220000000000100000000000037379301010152718000000000010244431001300000173020441221881098290010100001541592789119353920611983831388141220000006000000012613100000851222032700171010100200000000000030000001210000000002000000000118456000010000173
.................................................................AGCTGGTAAAATGGAACCAAAT...........................................................................................2224507.009014000001010000000000000002015831106100310030002226036565716000021101531982075583062694366550000000000638305656845161564448299544237150101105000000065051300000674653645466001108014160000000000001000000005301000100011000000000165510001000078
......................................................................................................TTTGGTCCCCTTCAACCAGCTGA.....................................................2323002.006004000000000000000000000008023022525020411252700000000000013671122023623261196038942940256321235200011560000122640335436130634181044327310000000100000000940730000020319960637001412221016000000000000000200025310000101032000000005274801100000002714
.......................................................................................................TTGGTCCCCTTCAACCAGCTG......................................................2122837.00567400000000000000000000000574201656810036314200000000000011646720244015405685942115312623626124313000001000224225167194124342355410534412000000500000009112000002292768071510011811020100010000000008000000055000000101400000000024202000010000610
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTT....................................................2322299.00459800000000000000000000000100005530021327520000000000000221000000001108949874130000300001157455407571185874621135971098700000160000000236319400000156180181210001000100000000000000300000010000000000001000000000349400000000020
.................................................................AGCTGGTAAAATGGAACCAAA............................................................................................2122157.004314000000000000000000000006000000120002205210100000010565716012022216364823171571782247340000000000137038140292372352871853521647000000400000001303100000142123114440010020010000000000000110000001210000000129000000003155400000000020
......................................................................................................TTTGGTCCCCTTCAACCAGC........................................................2032014.00604200010000000000000000000795242971323100012173036000000000000526349000000209201729792315272400000000001194819966616711567418380332364000000200000004000000005768117300053110002000000000000200000000110000000022000000001010103221000000021
......................................................................................................TTTGGTCCCCTTCAACCAGCT.......................................................2131664.334993000300000000510000000002621380832181190031421340011001001001915116746000027404954272364975158108237190045181410006112344131391612049165753000000940000000801700000041547573518840650301011000000000000120000001171240020010210000000003610001000000084
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAG...................................................2421558.003116000000000000000000000002002010000111691500000000000003100000000031031148613000000000010324813241569135144275377300000000000000000000000104131000000000000000000000000000000001000000005300000000722118641001000010
........................................................................................................TGGTCCCCTTCAACCAGCTGT.....................................................2121368.5027370000000000000000000000030421011400271332000000000000491120010031019303091285115911400101100003331419528458541201666966715000000240000000200500000089105217270021000001000000000000100000001100000000000000000000110302000000022
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTA....................................................2321356.002712000000200000000000000003021101200151623000000000000098000000000639215163328209000000000090319932538833264603314416000001300000005607000000122151198110322100000000000000000001000000000000000100000000011340900000000050
.................................................................AGCTGGTAAAATGGAACCAAATC..........................................................................................2321136.002272000000000000000000000002201010010111100000000020038104000000002727348641513131100000000002350196321722182717713024297200000000000000701200000342636610000020001000000000000000000000000000000000000000003143700000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTT...................................................2421087.5021750000000000000000000000000000011000101410000000000000000000000000101001020500100000001612869938910969302773725310000000000000000600730000026183050000000000000000000000000000000000000000010000000000010100000000040
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAT...................................................242992.001984000000000000000000000000000000000251260000000000000110000000001413311331000000000015022452205803419873305371600000000000000240100000051536710001000001000000000000000100000000000000000000000003148900000000022
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAA...................................................242966.5019330000000000010000000000070110000001211800000000000005200000000181171991261355000000000080210481727021162392072810000010000000002601000000969514580040010110000000000000100201000000002010010000000002542200000000052
.................................................................AGCTGGTAAAATGGAACCAA.............................................................................................202813.5016270000000000000000000000030000000000100442187400000414236000000002129572799213815151910000000000905365246347386723000100000000000110200000011412612760000001000000000000000010100000000000000000100000000108600000000013
.......................................................................................................TTGGTCCCCTTCAACCAGC........................................................193674.6720240000000000000000000000071210420000414150000000000003770000001104815823217300000000000340270287833420370346563200000000000000100000000223483240001000001000000000000200100000000000000020000000001014201000000001
.................................................................AGCTGGTAAAATGGAACCA..............................................................................................192647.501295000000000000000000000001000000000100100000000010001100000000035453220400000000000002431411218216119811545520000000000000060100000033520000000000000000000000000000000000000000000000000001026200000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTT....................................................242618.501237000000000000000000000001000002100031100000000000000110000000001110159125600101100002310691173363011739192402500000000000000420500000024433020000000000000000000000000010000000000000000000000000017002000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCT.......................................................203482.331447000000000000010000000001425520220001103000000000001011161010100102178541620151914100011100020142930169271847114000000600000009010001001522003751780060120117001000000000111000000000000000000000000000002600001000021
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAG...................................................252412.00824000000000000000000000000000002100233100000000000000100000000001001033610000000000009420704619721684111200000000000000000000000001000010100000000000000000000000000000000020010000000031033300000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTA....................................................242410.00820000000000000000000000006012001000024600000000000011520000000012113242529910001000000206114623110702611122000000010000000130000000040484900010000000000000000000000000000000000000000000000000113900000000000
..................................................................GCTGGTAAAATGGAACCAAATC..........................................................................................222404.50809000000000000000000000000000000000021100000000000026310131000032374280576610181500000010000914512143741036517400000020001000000000000211616220010000000000000000000010000000010000000026000000000111800000000001
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAGA..................................................252358.5071700000000000000000000000000000000011000000000000000200000000000020013410000000000000832694361995127011250000000000000000000000002000000000000000000000000000000000000000000000000000002222210000000011
.................................................................AGCTGGTAAAATGGAACCAAT............................................................................................212325.0065000000000000000000000000100000000000000000000000000000000000001008110000000000000040976676977445823000000000000000010000000010811100000000000000000000000000000000000000000000000000000011600000000010
..................................................................GCTGGTAAAATGGAACCAAAT...........................................................................................212311.0062200000000000000000000000100100001000000600020000000111100000010151738974850483000000000001708171014348200000000000000030100000044384755000001000100000000000000000000000000000100000000000002200000000021
........................................................................................................TGGTCCCCTTCAACCAGCTGTT....................................................222250.00500000000000000000000000000000000000002300000000000000000000000011031021100000000000210303968862330109185000000200000008010000002629434000000000100000000000020000000000000000000000000000012000000000000
........................................................................................................TGGTCCCCTTCAACCAGCTGTAG...................................................232246.5049300000000000000000000000000001100015330000000000000011000000001000011001000000000000491764432714156150000000000000000000000011200000000000000000000000000000000000000000000000000003312210000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAT...................................................252237.00474000000000000000000000000000000000000100000000000000000000000003312030110000000000014464714143520579400000020000000700000000551320000010000000000000000000000000000000000010000000001116900000000010
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTTT...................................................252233.5046700000000000000000000000001001000003350000000000000000000000000010002001000000000010532383131263207322190000000000000011010000001632000000000000000000000000060000000000000000000000000003700000000010
.........................................................................................................GGTCCCCTTCAACCAGCTGT.....................................................202221.00442000000000000000000000001000002000003100000000000000000000000020000100100000000000074938244274445000000000000000000000000037101000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAA...................................................252214.00428000000000000000000000002001001100100100000000000001200000000004462215310010000000203953778331342145000000000000003000000007102620000000000000000000000000100000000000000000000000001113200000000001
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTA...................................................242193.0038600000001000000000000000000000000002110000000000000000000000000111130011001000000070321847156428449150000001000000022001000002023248001001000000000001000000020000000000000000000000000102100000000011
.................................................................AGCTGGTAAAATGGAACC...............................................................................................182184.503690000000000000000000000000000000000003000000000000031000000000410000000000010000000013032036541832160000000000000000000000001001000000000000000000000000000000000000000000000000000016200000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTTT..................................................252175.00350000000000000000000000000000000000000100000000000000000000000000000000000000000000404613501911491361139000000000000003001000001120000000000000000000000000000000000000000000000000000005300000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGC.....................................................223171.00513000000000000000000000004010100000011100000000000011200000000011010010270000000000009622581318551671106000000000000007000000001516191400000000000000000000000000000000000000010000000000005800000000001
......................................................................................................TTTGGTCCCCTTCAACCAG.........................................................193169.0050700000100000000000000000140530123000033001000000000524258000000007710316121000000000000021720863042812300000010000000100000010024395157012000000100000000000050000000000000000001000000000003900000000000
.................................................................AGCTGGTAAAATGGAACCAAATT..........................................................................................232159.0031800000000000000000000000000000000001000000000001000010000000001214020200000000000017035323321311727111000000000000003002000001792115000001000000000000000020000000000000000000000000000003400000000001
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAAA..................................................252143.5028700000000000000000000000000000001000020000000000000020000000000102010110000000000010376239127134871000000000000002000000002180001000000000000000000000000000000000000000000000000038600000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTATT..................................................252138.00276000000000000000000000000000000000002000000000000000000000000001000000010000000000002561820221831710000000000000000000000001000000000000000000000000000000000000000000000000000000013100001000000
................................................................AAGCTGGTAAAATGGAACCAAA............................................................................................222123.502470000000000000000000000000000000100000000000000000002000000000382183610000000000000370402100185000001000000000000600000651153000000000100000000000000000000000000000000000000000005300000000000
..........................................................................................................GTCCCCTTCAACCAGCTGT.....................................................192122.0024400000000000000000000000001000000000220000000000000000000000000000000000000000000000513013311000000000000000000000000000100000000000000000000000000000000000000000000000000001320700000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGC.....................................................233110.33331000000000000000000000004101000000034500000000000001500000000001000022010000100000104710259632943122000000100000002001000001713192000100000100000001000000000000010000000001000000000004201000000010
........................................................................................................TGGTCCCCTTCAACCAGCTGTAA...................................................232110.00220000000000000000000000000000000000000100000000000001000000000021010001000000000000101161144686801000000000000002000000002328281000000000000000000000000000000000000000000000000000001000000000001
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAAT..................................................252110.002200000000000000000000000010010000000000000000000000000000000000100000110100000000000025325422573860000000000000003000000001071001000000000000000000000000000000000000000000000000016500000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGG.....................................................222109.002180000000000000000000000010000000000023000000000000010000000000000000000000000000000029154113124010344000000000000000000000000526000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGGTCCCCTTCAACCAGCTGTA....................................................222105.00210000000000000000000000001000000000002100000000000000000010000031150303200000000000009214424106024000000000000007010000001418241000000000000000000000000000000000000010000000000000001000000000000
..................................................................GCTGGTAAAATGGAACCAAA............................................................................................202103.00206000000000000000000000000000000000000000000000000015400000000018119221902400000000000002271015432920000001000000000000000046108000000000000000000000000000000200000000001100000000001300000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAGA..................................................262100.0020000000000000000000000000000000000000100000000000000000000000000000001000000000000000237311062731918000000000000000000000000000000000000000000000000000000000000000000000000000000036000000000000
........................................................................................................TGGTCCCCTTCAACCAGCTGTTT...................................................23293.0018600000000000000000000000000000000000000000000000000000000000000100000000000000000022127261141413621500000000000000200000000547000000000000000000000000000000000000000000000000000000700000000001
......................................................................................................TTTGGTCCCCTTCAACCAGCTT......................................................22386.33259000000000000000000000005001001000000000000000000000100200000011121222800000000000111661542185369100000010000000502000000201848700010100020000000000000000000001000000000000000000000800000000010
........................................................................................................TGGTCCCCTTCAACCAGCTG......................................................20285.0017000000000000000000000000111100010000200000000000000011000000000034131021000000000000281001428910000000000000000000000004414200000000000000000000000000000000000000000000000000000500000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTAT..................................................25385.0025500000000000000000000000000000000011100000000000000000000000000001000000000000000040339531011341038860000000000000010000000000161000000000000000000000000030000000000000000000000000001300000000010
........................................................................................................TGGTCCCCTTCAACCAGCTGA.....................................................21274.0014800000000000000000000000000110000000110000000000000000000000000114023020000000000000733143126431000000000000000100000000643000000000000000000000000000000000000000000000000000000700000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGAT....................................................23270.501410000000000000000000000000000000000020000000000000000000000001000001000100000000000018161770185212200000000000000500000000557000000000000000000000000000000000000000000000000000000800000000000
........................................................................................................TGGTCCCCTTCAACCAGCTGTAT...................................................23263.001260000000000000000000000000000000000000000000000000000000000000000000000100000000000185182195552000000000000000000000000434200000000000000000000000000000000000000000000000000000600000000000
................................................................AAGCTGGTAAAATGGAACCAAAT...........................................................................................23261.0012200000000000000000000000000000002000000000000001000110000000003221300000000000000136010000002200000200000000000010000063632000000000000000000000000000000000000000000000000000001400000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAGT..................................................25255.00110000000000000000000000000000000000000000000000000000000000000000000010000000000000001628121821200000000100000000000000001110000000000000000000000000010000000000000000000000000004300000000000
.................................................................AGCTGGTAAAATGGAACCAAATA..........................................................................................23254.50109000000000000000000000000000000000000000000000000000000000000010205702100000000000505012131731200000000000000000002000009143000000000000000000000000000000000000000000000000000101300000000000
.......................................................................................................TTGGTCCCCTTCAACCAG.........................................................18354.0016200000000000000000000000300101000000120000000000000552000000107391101100000000000000946338484100000000000000200000000613161600100000000000000000003000000001000000000000000000000900000000010
.........................................................................................................GGTCCCCTTCAACCAGCTGTT....................................................21251.001020000000000000000000000000000000000001000000000000000000000000000000000000000000000234834030240000000000000000000000000021000000000000000000000000000000000000000000000000000000200000000000
.................................................................AGCTGGTAAAATGGAACCAAATCT.........................................................................................24251.001020000000000000000000000000000000000000000000000000000000000000010003000000000000001011281211161050000000000000000000000002125000000000000000000000000000000000000000000000000000002100000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTT......................................................21348.33145000000000000000000000002000000000001000000000000000000000000010172112100000000000201228218014420000003000000030030000017830300000000000000000000000000000000000000000000000000010300000000000
.........................................................................................................GGTCCCCTTCAACCAGCTGTAG...................................................22245.509100000000000000000000000000000000000000000000000000000000000000000000000000000000000231011046000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................AGCTGGTAAAATGGAAC................................................................................................17244.00880000000000000000000000000000000000000000000000000000000000000891111010000000000000004283041980000000000000000000000000000000000000000000000000000000000000000000000000000000001800000000000
..................................................................GCTGGTAAAATGGAACCAA.............................................................................................19243.008600000000000000000000000000000000000000000000000000100000000000009851000000000000000001100172000000000000000000000000141614500000000000000000000001000000000000000000000000000000000000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGAT....................................................24242.008400000000000000000000000001100200000000000000000000010000000002221013100000000000000797302471000000010000000100000000837100000100000000000000000000000001000000000000000000000400000000000
......................................................................................................TTTGGTCCCCTTCAACCA..........................................................18341.671250000000000000000000000000011120000111000000000000063100000000201000000000000000000091210747100000000000000000100000036104500000000010000000000000000000000000000000000000000000500000000001
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTTA...................................................25241.00820000000000000000000000000100000000011000000000000000000000000000001100100000000000014585172152100000000000000200000000114000000000000000000000000003000000000000000000000000000500000000000
.................................................................AGCTGGTAAAATGGAACCAAAA...........................................................................................22239.5079000000000000000000000000000000000000000000000000000100000000024031200000000000000204037165114000000000000000100000000356100000000000000000000000000000000000000000000000000000700000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGGT....................................................23239.50790000000000000000000000000000000000000000000000000000000000000000001000000000000000011131632143141000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGGTCCCCTTCAACCAGCTGTTA...................................................23238.0076000000000000000000000000010000000000100000000000000000000000000000100000000000000012142113134100000000000000200100000121211100000000000000000000000000000000000000000000000000000100000000000
......................................................................................................TTTGGTCCCCTTCAACC...........................................................17337.67113000000000000000000000000000000000110300000000000000000000000012300100010000000000002921713122750000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAAA..................................................26237.50750000000000000000000000000000000000000000000000000012000000000000001020000000000000072132244430000000000000000000000000000000000000000000000000000010000000000000000000000000002700000000000
.......................................................................................................TTGGTCCCCTTCAACC...........................................................16337.331120000000000000000000000000000000000000000000000000000000000000010000000000000000000031120331751541000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000
................................................................AAGCTGGTAAAATGGAACCAA.............................................................................................21237.00740000000000000000000000000000000000000000000110000010000000000345100001000000000001303000000200000000000000000000000002362300000000010000000000000000000000000000000000000000000400000000000
................................................................AAGCTGGTAAAATGGAACCAAT............................................................................................22237.007400000000000000000000000100000000000000000000000000000000000001000010000000000000015000120112100000000000000000000000010130000000000000000000000000000000000000000000000000000001600000000000
.................................................................AGCTGGTAAAATGGAACCAT.............................................................................................20236.0072000000000000000000000000000000000000000000000000000000000000000010100000000000000007079077830000000000000002000000002341000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGG.....................................................23235.50710000000000000000000000000000010000100000000000000010000000000000100341100000000000083125010161000000020000000100000000411100000000000000000000000000000000000000000000000000001100000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTTTT..................................................26235.00700000000000000000000000000000000000021000000000000000000000000001000000000000000000024143171184100000000000000100000000000000000000000000000000000000000000000000000100000000000900000000000
...............................................................AAAGCTGGTAAAATGGAACCA..............................................................................................21133.0033000000000000000000000000000000000100000000000000000110000000021100001000000000000002002010100000000000000000000000000000000000000000000000000000000000000000000000000000000001900000000000
........................................................................................................TGGTCCCCTTCAACCAGCTGTAGA..................................................24232.5065000000000000000000000000000000000100000000000000000000000000002000001000000000000000020052391200000000000000000000000011000000000000000000000000000000000000000000000000000000800000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTAA..................................................25232.006400000000000000000000000000001000000000000000000000000000000000000001001000000000010826517280100000000000000100000000453100000000000000000000000001000000000000000000000000000500000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGATT...................................................24231.00620000000000000000000000000000000000000000000000000000000000000100000010000000000000091257131171100000000000000000000000100000000000000000000000000000000000000000000000000000000200000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAAG..................................................25230.006000000000000000000000000000100000011000000000000000000000000000000000100000000000000531051101101100000000000000000000000001000000000000000000000000000000000000000000000000000000800000000000
...............................................................AAAGCTGGTAAAATGGAACC...............................................................................................20130.0030000000000000000000000000000000000001000000000000000000000000000000000000000000000000003000110000000000000000000000000000000000000000000000000000000000000000000000000000000002400000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTC....................................................23228.005600000000000000000000000000000000010000000000000000000000000000040000000000000000000458119230100000000000000500000000415100000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTATA..................................................25227.0054000000000000000000000000000000000000000000000000000000000000000000001000000000000005544171521000000000000000000000002000000000000000000000000000000000000000000000000000000001600000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAAT..................................................26226.5053000000000000000000000000000001000000000000000000000000000000001000000100000000000106163066621000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000001
.......................................................................................................TTGGTCCCCTTCAACCAGA........................................................19424.00960000000000000000000000010000000000051000000000000000000000000000000000000000000000019019631211400000000000000000000000001120000000000000000000000010000000000000000000000000000001000000000000
........................................................................................................TGGTCCCCTTCAACCAGC........................................................18323.677100000000000000000000000000000000001100000000000001010000000000000010000000000000000511500410230100000000000000000000000004000000000010000000000000000000000000000000000000000000200000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTCT...................................................24223.504700000000000000000000000000000000001100000000000000000000000000000000000000000000010708114180200000000000000100000000404000000000000000000000000000000000000000000000000000000102000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTATT..................................................26223.5047000000000000000000000000000000000001000000000000000000000000000000001000000000000003023151210000000000000000000000000000000000000000000000000000000000000000000000000000000002700000000000
.....................................................................................................ATTTGGTCCCCTTCAACCAGCTG......................................................23223.004600000000000000000000000200000000000000000000000000332000000000011113240000000000000000001030000010000000000000000000318100000000000000000000000000000010000000000000000000000400000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTTAT..................................................26223.00460000000000000000000000000000000000001000000000000000000000000000000000000000000000022111232103300000000000000100000000001000000000000000000000000000000000000000000000000000000400000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAAGA.................................................26222.5045000000000000000000000000000000000000000000000000000000000000000000000000000000000004193080701000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000
.....................................................................................................ATTTGGTCCCCTTCAACCAGC........................................................21222.5045000000000000000000000000000000000000100000000000000100000000000010000010000000000007050030120100000000000000000000000111100000000000000000000000000000000000000000000000000000900000000000
................................................................AAGCTGGTAAAATGGAACCA..............................................................................................20222.5045000000000000000000000000000000000000000000000000000000000000001110000000000000000100002002510000000000000000000000000015000000000000000000000000000000000000000000000000000002500000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTTA.....................................................22321.0063000000000000000000000000000000000000100000000000000000000000000000000000000000000008617326452000000000000000001000000422000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTTA..................................................25221.004200000000000000000000000000000000000000000000000000000000000000000000000000000000020506104292300000000000000300000000101000000000000000000000000000000000000000000000000000000300000000000
......................................................................................................TTTGGTCCCCTTCAACCAGA........................................................20319.0057000000000000000000000000110000000010000000000000000100000000000000000000000000000002372172600000000000000007000000002100000100000000000000000010000000000000000000000000000001100000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAAG..................................................26219.003800000000000000000000000000000000000000000000000000100000000000000001001000000000000414209161000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTC...................................................24219.003800000000000000000000000000000000000010000000000000000000000000100000000000000000000523122152200000000000000200000000140000000000000000000000000000000000000000000000000000000400000000000
....................................................................TGGTAAAATGGAACCAAATCGA........................................................................................22218.50370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016714000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAGAA.................................................26218.003600000000000000000000000000000000000000000000000000000000000000000000100000000000000433248131100000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGAG....................................................24216.503300000000000000000000000000000000000000000000000000411000000000012005360000000000000012000030000000000000000000000000002000000000000000000000000000000000000000000000000000000200000000000
...............................................................AAAGCTGGTAAAATGGAAC................................................................................................19116.0016000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000001200000000000
...........................................................................................................TCCCCTTCAACCAGCTGT.....................................................18316.0048000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000000004400000000000
.........................................................................................................GGTCCCCTTCAACCAGCTGTA....................................................21216.0032000000000000000000000000000000000000000000000000000000000000000000001000000000000000611020270000000000000000000000000002000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................ATTTGGTCCCCTTCAACCAGCTGT.....................................................24216.003200000000000000000000000100000000000010000000000000000212000000100000000000010000000000101140000000000000000000000000028000100000000000000000000000000003000000000000000000000200000000000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTGA...................................................24215.503100000000000000000000000000000000000000000000000000100000000000002010000000000000000312012241000000000000000100000000122000000000000000000000000000000000000000000000000000000500000000000
.................................................................AGCTGGTAAAATGGAACCAAC............................................................................................21215.003000000000000000000000000000000000000000000000000000001000000000000100000000000000010406300131000000000000000100000000130000000000000000000000000000000000000000000000000000000400000000000
.................................................................AGCTGGTAAAATGGAACCAAATTT.........................................................................................24213.502700000000000000000000000000000000000000000000000000000000000004001000000000000000000401402222000000000000000000000000001000000000000000000000000000000000000000000000000000000400000000000
cavPor3
AAACGAA-ATCACTGATTTGTCC-TGGGTCCCAAACCAGCAGCAC----TACAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTTCTGCAGGAGAGCCAGCACTTTATTATTATCAATTATASizeHit CountTotal NormTotal
No Reads
dipOrd1
ATAT--------TTTAACTGTTT-TGGATCCCAAACTAGCAGCAC----TACAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGATAGCCAACGTTTTGTGAATATCAATTATASizeHit CountTotal NormTotal
No Reads
hetGal2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
ochPri2
AA-CGAAAATAATATAAATGTTTCTGGATTCCAAACTAGCAGCACTCCATACAATGCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTTAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGACAGCTAATGTTTTAAGGATGTCAA----ASizeHit CountTotal NormTotal
No Reads
oryCun2
AAATGAAAAGCATTTAACTGTTT-TGGATTCCAAACTAACAGCAC----TACAATGCTTTGCTAGAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGACAGCCAACATTTTATGAATGTCAATCACASizeHit CountTotal NormTotalGSM1528820
Adult_testes		GSM1528821
Adult_testes_Mili_IP
No Reads
rn5
AAATG---AGCATAGAACTTGTT-TGGATCCTAAACCAGCAGCG------GCAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTGCCACAGGACAGCCAGCGCTCTGTGAATGTGAGTTACASizeHit CountTotal NormTotalGSM1528817
Adult_testes		GSM1528818
Adult_testes_Mili_IP		GSM1528819
10dpp_testes
......................................................................................................TTTGGTCCCCTTCAACCAGCTGT.....................................................23243.0086000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGT.....................................................22228.0056000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAA...................................................24217.0034000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAT...................................................2429.0018000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTT....................................................2328.0016000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTT....................................................2427.0014000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTA....................................................2425.5011000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGA.....................................................2225.0010000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAA...................................................2524.008000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTAT..................................................2524.008000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGA.....................................................2324.008000
......................................................................................................TTTGGTCCCCTTCAACCAGCTG......................................................2223.507000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTTT...................................................2523.006000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGAT....................................................2422.505000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTAT...................................................2522.505000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTT...................................................2422.505000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTTT..................................................2521.503000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAAT..................................................2521.503000
........................................................................................................TGGTCCCCTTCAACCAGCTGTAT...................................................2321.503000
.................................................................AGCTGGTAAAATGGAACCAAAT...........................................................................................2221.503000
.......................................................................................................TTGGTCCCCTTCAACCAGCTG......................................................2121.503000
........................................................................................................TGGTCCCCTTCAACCAGCTGT.....................................................2121.503000
..................................................................GCTGGTAAAATGGAACCAAAT...........................................................................................2121.503000
.....................................................................................................ATTTGGTCCCCTTCAACCAGCTG......................................................2321.002000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAAA..................................................2521.002000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTAA..................................................2521.002000
.....................................................................................................ATTTGGTCCCCTTCAACCAGCTGT.....................................................2421.002000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTA....................................................2321.002000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTTTT..................................................2621.002000
........................................................................................................TGGTCCCCTTCAACCAGCTGTTA...................................................2320.501000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGGT....................................................2320.501000
......................................................................................................TTTGGTCCCCTTCAACCAGCTGTTAT..................................................2620.501000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGAT....................................................2320.501000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTGA...................................................2420.501000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTTA...................................................2420.501000
.......................................................................................................TTGGTCCCCTTCAACCAGCTGTAC...................................................2420.501000
........................................................................................................TGGTCCCCTTCAACCAGCTGTT....................................................2220.501000
......................................................................................................TTTGGTCCCCTTCAACCAGC........................................................2030.331000
......................................................................................................TTTGGTCCCCTTCAACCAGCT.......................................................2130.331000
........................................................................................................TGGTCCCCTTCAACCAGCTGTTAA..................................................2430.331000
speTri2
AAATGAAAAGCATTTAACCGTTT-TGGATCCCAAACTGGCAGCAC----TACAATGCTTTGCTAAAGCTGGTAAAATGGAACCAAATCGCCTCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGATTACTACAGGAGAGACGACGGTTCATGAATATCAGTTACCSizeHit CountTotal NormTotal
No Reads

Generated: 04/30/2015 at 09:12 PM