Possible Orthologs for sblock53978

droSim1 - 32 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
599 chr3R:1415632-1415763 + 81.44
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACTCACTGTTTATAATTTTCAAACAGAGATATATAATTTCAAATTGCCTTGGCTGTGTTCTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTACGAATTCCATTTAATCATGGTCCCTGCCATATTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........TTGTTTATAATTTTCAGAC........................................................................................................1930.670.000.000.000.67
......................................................GGCTGxGTTCTGCTGGCTG...........................................................1830.330.000.000.330.00
............................................................GTTCTGCTTGCTCATCGG......................................................1830.330.000.000.330.00
1347 chr2R:265581-265711 - 75.69
TTGAACTTACTGT--TTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACTCATTGTTTTTAATAATTCCACACACAGATATTTAATTGAAAATTGCCTAGGAGGCGACATGCGGGCGCATCGGTATGTCTGCGATTGAGCTATGATTTGTATCCAATCATGGT---CGCCATATTTT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........................................................................................................GTATCCAATCCTCGT---CGCCA......2011.000.001.000.000.00
.......................................................................GCGCATCTGTTTGTCTGC.............................................1811.000.000.001.000.00
95 chr2h_random:2411690-2411810 + 71.88
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T------------TTATTAATGTCACACACAGATATACAATTTTATGTTGCCTTGGCTGCAGTTTGATGGCTCGTCGGTATGGCTGCGATTGAGCTATGATTTGCATTTAATCATAGTCCCTGTCATATTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
887 chrU:11626934-11627058 + 68.27
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT-TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAAGTCACTAT------ATCTTTTTTTCACATAAATAACTTTAATTTGCCTTAGCTGCAACTTGATGGCTCGTTGGTATGGCTATGATTGAGCTTTGA-CTGCCTTTTTTCGAGCTCCGAGCCATATTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........................................................................GTTGGTCTGGATATGATT.........................................1820.500.000.000.500.00
57 chr2h_random:1549702-1549823 + 68.06
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT-TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAAAT--GTTTTAAATAATTTCACACACAGATATTAAATGTCAAATTGTGTTGGCTGTGACATGCT-GCTCGTTGGCATGGCTTCTATTGAGCTA-------CATTTATTCATGGTCTGCGTCATATTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..............................................................CATGxT-GCTCGCTGGCATG..................................................1840.750.000.500.250.00
.................................................................ACT-GTTCGTTGGCATGGCT...............................................1930.330.000.000.330.00
1714 chr4:93419-93541 - 65.51
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAAGTCACTATATCTTTATTTTACATAAATAA-----CTTTAATTTGCCTTAGCTGCAACTTGATGGCTCGTTGGTATGGCTATGATTGAGCTTTGAT-TGCCTTTTTTCGAGCTCCGAGCCATATT--
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
........................................................................GTTGGTCTGGATATGATT.........................................1820.500.000.000.500.00
.....................................................................................TGATTGAxCTTTGCT-TGCCT.........................1911.000.000.000.001.00
954 chrX:3240619-3240766 + 56.74
TTGAACTTACTGTTTAATAATGTTAAATACAGATAT--------ATAATTAAAG--------TTGCCTTGGCTACGACTTGCT--GGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CGCGATTGACTCGAGAAAATTGAAAAGAATAAATATCTTCACGTGAAATTAAACTAAACTTTTTGCCTTGGCGGTGACCTGCGGAGGCGCGTCGGCATGGCTGCGATTGAGGTAAGATTTGCATTTAATCATGGTC-CCGCAATGTTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
............GAGAAAGTTGAAAAGAAC.......................................................................................................................1831.330.000.000.001.33
..............................................AATTAAACTAAATTTATT.....................................................................................1840.250.000.000.250.00
174 chr2L:20852947-20853076 + 48.53
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTT------GCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-GAGCTTATAATTTAATGGT---GGATAGAGATTTTTAGTTACAACCGAA--CGTTACGAACTCTCCTTTTTCTTTCGGCAGTGCCACTCAAAATGGT-CAAAATAAATACATTTTAGTTGCCTCAGTTGCAGCTG
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
......................................................................ATTCTTTCGGCTGTGCCA.................................................1811.000.001.000.000.00
995 chrX:15857264-15857363 + 47.82
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGAT--TGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATAA--------------------------GGATCGATAACTATCGACGTCTC----ACGACTCACGAA---ATCTGTAAAGCAGTAAAACAGACAAATGATTTGCCTTTATTTATGGTCCCCGCCATATACC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
................................................................................AGCAGTAAAAAAGACAAG...................................1830.330.000.000.000.33
2058 chrX:17018320-17018437 - 46.47
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGC------------TGCGATTGAGCTATGATCTGCATTTAATTATGGTCC-----------CCGCCATATTCC
AA------------------AGTAAGTTTCTAAAATACAGATAAAGTTTCGGCGGCGA-AGCAGACTGGCTTCACGAAATAATTATTTTCCTGACTTCCAAT-----------------GCAATATTGCCCGGCGCCCTATTGCGCCATATTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.............................................................................AAAAATTATCTTCCTGACTT.........................................................2030.670.000.000.000.67
....................................................CGGCGA-AGGCGACTGGCT...................................................................................1830.330.000.000.330.00
.................................................................................GTTATTTTCCTGACTGCC.......................................................1830.330.000.000.330.00
1476 chr3h_random:814664-814775 - 41.5
TTGAACTTACTGTTTAATAATGTTAA-----ATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAAAAATTATTTTTTCATAATTTTATTAGTATTGTAAATTTTTA--TCGATCTCTCTCTACTCTAACTCACTAACG----------------TTTGAACT------CACTGTTTCTAATAATTTCACACATATTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
....................GTTTATTAGTATTGTAAA..................................................................................................1831.670.000.670.001.00
................ATATTTTTATTAGTCTTGTAAATTT...............................................................................................2550.400.000.000.000.40
...................AGTTTATTAGTATTGTAAAA.................................................................................................2012.000.000.000.002.00
......................TTATTAGTATTGTAAACT................................................................................................1830.670.000.000.000.67
.....................TTTATTAGTATTGTAAAAC................................................................................................1920.500.000.000.000.50
.......................................................................TAACG----------------TTTGAACT------CACTGTTTCTAA..................2530.330.000.000.000.33
.....................TTTATTAGTATTGTAAAAG................................................................................................1920.500.000.000.500.00
...................AGTTTATTAGTATTGTAAA..................................................................................................1920.500.000.500.000.00
...................ATTCTATTAGTCTTGTAAATTT...............................................................................................2240.250.000.000.000.25
1584 chr3L:22335186-22335264 - 34.35
TTGAACTTACTGTTTAATAATGTTAAATACAGATAT-----ATAATT-----AAAGTTGC----CTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAAAAAATACT-TTCATTAA--ATAAATACAAATATGCAACATAATTATTTCAAAATTGATTTCTTGAGGCACGACGTGCGG---------------------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........................................................TGATTTCTTGAGGCACGACGTGCGG---------------------------------------------------------------2721.000.000.000.001.00
........................................................ATGATTTCTTGAGGCGCG.......................................................................1820.500.000.500.000.00
583 chr3R:467658-467736 + 33.17
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT-TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T------------TTAATAATTTCACACGCAGATATTTAATTTAAAATTGCCTTGGC---GGTTATCTGGCGCATCGGTATGGCTGCGATTGAG--------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..............................ATATAxTTAATTTAAAACTG..................................................................................1930.330.000.330.000.00
1986 chrX:10802296-10802366 - 31.78
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCGATTAGAACTTATAATCAAAAAAACTTAATATGAATAATTAAAGTTTCTTTTATTATGTTTTTGTGGCT------------------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
680 chr4:356144-356214 + 31.78
TTGAACTTACTGTT--------TAATAATGTTAAA-TACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAATTATTTGTACAGATGACCTATTATGTTAAACTACAGATTC-----------------------------------------------------------------TACATTTAACTTCGAC----ATTACTTCTA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
................................AAACTATAGATTC-----------------------------------------------------------------TAGAT.........................1811.000.000.000.001.00
469 chr3L:18819341-18819401 + 31.01
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAGAATTCACTGATTGATGATATTAAATTTAAATATATAAATTTAATTGTAATGGATGTAA----------------------------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
........................................GTGTAATTGTAATGGATG.........................................................................1811.000.001.000.000.00
1399 chr2R:3276973-3277030 - 31.01
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAA--AGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-----------------------ATATATAAATATATATTTAAAAATTTGCCTTTTTGATGATTTTCTGATTACTCGGTA----------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
979 chrX:13355593-13355652 + 30.23
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGCACTTCCTGTGCAAAGCTGATTGATAAGCATATATATTTATAATTGCTTTAATTATG-----------------------------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
1495 chr3L:3799989-3800057 - 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATCGGATTGCAATTTAATAACATTTCGGTCAGCTTCATATGTATATCTTCCTTACTCATGAGTTTCTGG--------------------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
1693 chr3R:14291007-14291050 - 20.93
TTGAACTTACTGTTTAA----TAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAGCTTACTTATTGAAACTTAATTTTTGTTGTAGATCTATCA-------------------------------------------------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
478 chr3L:19151545-19151606 + 19.95
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT--AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
-------------------------AACACAGATATATAAATTTATG---ATTTAAGCTGCAACTTGATGACTCGT-------------------------------------------GCAACTCATGCTCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................................TAAGCTGCAACTTGATGACTCGT-------------------------------------------GC............2513.001.000.000.002.00
................................................................TTGATGACTCGT-------------------------------------------GCAACTCATGCTCC2612.000.000.000.002.00
.....................................TAAATATATG---ATTTAGGC...........................................................................1811.000.000.001.000.00
.................................................................TGATGACTCxT-------------------------------------------GCAACTCATGCTCC2411.000.000.000.001.00
........................................ATTTATG---xTTTAAGCTGGAAC.....................................................................2011.000.000.000.001.00
.................................................................TGATGACTCGT-------------------------------------------GCAACTCATGCTCC2511.000.000.000.001.00


droSec1 - 38 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
149 super_6:1494904-1495035 + 82.18
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACTCACTGTTTATAATTTTCAAACAGAGATATATAATTTCAAATTGCCTTGGCTGTGTCCTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTACGAATTCCATTTAATCATGGTCCCTGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..................................................................CTGGCTCGTCGGTATGGCTGC.............................................2190.110.110.000.00
........................AAACAGAGATATTGAATT..........................................................................................1830.330.000.330.00
2058 super_55:122579-122710 - 79.96
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCGAACTTACCGTTTATTAATTTCACACACATATTTATAATTTTAAGTTTACTTGGCTGCAACTCGAGGGCTCGTCGGTATAGCTGCGATTGAGCTAAGATTTGCATTTAATCATGGTCCCCCGCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
1056 super_275:10148-10269 + 73.9
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
-----------GTTTATTAATGTCACACACAGATATACAATTTTATGTTGCCTTGGCTGCAATTTGATGGCTCGTCGGTATGGCTGCGATTGAGCTATGATTTGCATTTAATCATAGTCCCTGTCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..................................................................CTGGCTCGTCGGTATGGCTGC.............................................2190.110.110.000.00
............................................................AATTTGATGCCTAGTCGG......................................................1830.330.000.330.00
674 super_43:60493-60622 + 71.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTAC------GACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACTTACTCTTTATAAATTGCACACACAAATATTTAATTTCAAATTGCGTTGTCTGTGACCGTGACCTGCTGTCTCGTCGGTATGGCTGCGATCG-------ATTTGTATTTAATCATGGTT-CCGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.......................................ATTTCAAACTGCGCTGTC.................................................................................1830.330.000.330.00
........................................................................CTGGCTCGTCGGTATGGCTGC.............................................2190.110.110.000.00
2149 super_72:138771-138886 - 63.35
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAA-TTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAAAT--GTTTTAAATAATTTCACACACAGATATTAAATTTAAAATTGCGTTGGCTGTGACATG-------GTTGGCATGGCTTCTATTGAGCTA-------CATTTAATCATGGTCTCCGTCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
2092 super_61:62971-63116 - 60.49
TTGAACTTACTGT--TTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC---------------
TTGAACTCATTGTTTTTAATAATTCCACACACAGATATTTAATTGAAAATTGCCTAGGAGGTGACATGCGGGCGCATCGGTATGTCTGCGATTGAGCTATGATTTGTATCCAATCATGGT---CGCCATATTTTATATATTATATATTA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...........................................................................................................ATCCCATCATCGT---CGCCA.....................1830.670.000.330.33
...........................................................................................................ATCCTGTCATGGT---CGCCA.....................1830.670.000.670.00
.....................................................................................................................................TATTTATTATATCTTA1820.500.000.000.50
1396 super_4:2513769-2513916 - 56.74
TTGAACTTACTGTTTAATAATGTTAAATACAGATAT--------AT-----AATTAAAG---TTGCCTTGGCTACGACTTGCT--GGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CGCGATTTACTCGGGAAAATTGAAAAGAATAAATATCTTCACGTGAAACTAAACTAAACTTTTTGCCTTGGCGGTGACCTGCGGAGGCGCGTCGGCATGGCTGCGATTGAGGTAAGATTTGCATTTAATCATGGTC-CCGCAATGTTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...........AGGGAAAGTTGAAAAGAA........................................................................................................................18791.710.431.1490.14
...........GGGGAAAGTTGAAAAGAA........................................................................................................................1872.570.000.002.57
...........AGGGAAAATTGAAAAGAA........................................................................................................................1870.140.000.000.14
..........GCGGGAAACTTGAAAAGAA........................................................................................................................1970.140.140.000.00
....................................................................................AGGCGxGTCGGCATGGCTG..............................................1890.110.000.000.11
........................................AACTGAAACTAAACTAAACT.........................................................................................2070.140.000.140.00
477 super_29:505493-505620 + 50.32
TTGAACTTACTGTTTAATAATGTTAA--------ATACAGATA--------------------------------TATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGATC---CTGGTCAAGAATATATACTTTATATAGTCGGATATGCTTCCTTCCTTTTACTCTACGAGTAACGAGTATGATTTAA---------GCTGCAACTTGATGACTCGTGCA-------------------------------ACTCATGCTCCCGTCCATAATCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
....................TATATACTTTATATAGTCGGATATGCT............................................................................................................................2713.000.002.001.00
.............................TATATAGTCGGATATGCTTCCTTCCTT...................................................................................................................2713.000.003.000.00
.................ATATATATACTTTATATAGTCGG...................................................................................................................................2350.400.000.400.00
..........................................................................................................TGACTCGTGCA-------------------------------ACTCATGCTCCCG..........2412.000.002.000.00
............................................................TCTACGAGTAACGAGTATGATTTAA---------GC...........................................................................2712.000.002.000.00
......................TATACTTTATATAGTCGGATATGCT............................................................................................................................2512.000.002.000.00
..........TGGTCAAGAATATATACTTTATATAGT......................................................................................................................................2712.000.002.000.00
.................ATATATATACTTTATATAGTCGGA..................................................................................................................................2450.400.000.400.00
...............................................................................ATTTAA---------GCTGCAACTTGATGACTCG..........................................................2512.000.002.000.00
..................................................................................TAA---------GCTGCAACTTGATGACTCGTGCA-------------------------------A......................2712.000.002.000.00
.............................................................CTACGAGTAACGAGTATGATTTAA---------GC...........................................................................2612.000.002.000.00
....................TATATACTTTATATAGTCGGATATGC.............................................................................................................................2611.000.001.000.00
........................................................TTACTATACGAGTAACGGGT...............................................................................................2040.250.000.250.00
..................................................................................TAA---------GCTGCAACTTGATGACTCGTGCA-------------------------------AC.....................2811.000.001.000.00
.................................................................................................................TGCx-------------------------------ACTCATGCTCCCGTCCATAAT..2411.000.001.000.00
.......................................................................................................TGATGACTCGTGCA-------------------------------ACTCATGCTCCC...........2611.000.000.001.00
.TGATC---CTGGTCAAGAATATATACTT..............................................................................................................................................2511.000.001.000.00
............................TTATATAGTCGGATATGCTTCCTTC......................................................................................................................2511.000.001.000.00
......................TATACTTTATATAGTCGGATATGCTA...........................................................................................................................2611.000.001.000.00
....................................................................................................ACTTGATGACTCGTGCA-------------------------------ACTCATG................2411.000.001.000.00
.......................................................................................................TGATGACTCGTGCA-------------------------------ACTCATGCTC.............2411.000.001.000.00
..........................................................................................................TGACTCGTGCA-------------------------------ACTCATGCTCCCGTC........2611.000.001.000.00
..................................................................................TAA---------GCTGCAACTTGATGACTCGTGC.......................................................2511.000.001.000.00
........................................................TTACTCTACGAGTAACGAGTATGAT..........................................................................................2511.000.001.000.00
.......................................................................................................TGATGACTCGAGCA-------------------------------ACTCATGCTCCCG..........2711.000.001.000.00
...........................TTTATATAGTCGGATATGCTTCCTTC......................................................................................................................2611.000.001.000.00
..............................................................TACGAGTAACGAGTATGATTTAA---------GC...........................................................................2511.000.001.000.00
...................ATATATACTTTATATAGTCGGATATGC.............................................................................................................................2711.000.001.000.00
...................ATATATACTTTATATAGTCGGATATG..............................................................................................................................2611.000.001.000.00
...........................................TGCTTCCTTCCTTTTACTCTACGAG.......................................................................................................2511.000.001.000.00
..............................................................................................................TCGTGCA-------------------------------ACTCATGCTCCCGTCCATA....2611.000.001.000.00
......................................................................................................TTGATGACTCGTGCA-------------------------------ACTCATGCTC.............2511.000.001.000.00
.................................................................................TTAA---------GCTGCAACTTGATGACTCGTGC.......................................................2611.000.001.000.00
...............................................TCCTTCCTTTTACTCTACGAGTAACGAG................................................................................................2811.000.001.000.00
......................TATACTTTATATAGTCGGAAACGCT............................................................................................................................2530.330.000.330.00
................................................................................TTTAA---------GCTGCAACTTGATGACTCGTGC.......................................................2711.000.001.000.00
.....................ATATACTTTATATGGTCG....................................................................................................................................1850.200.000.200.00
.....................................................CTTTTACTCTACGAATAACGG.................................................................................................2111.001.000.000.00
............................TTCTATAGTCGGATATGCTTCCTTC......................................................................................................................2511.000.001.000.00
...............................TATAGTCGGAAACGCTTCCTT.......................................................................................................................2140.250.000.250.00
.....................ATATACTTTATATAGTCGGATATGC.............................................................................................................................2511.000.001.000.00
.......................................................................................................TGATGACTCGTGCA-------------------------------ACTCATGCTCC............2511.000.001.000.00
...................................................................................................AACTTGATGACTCGTGCA-------------------------------ACTCATGC...............2611.000.001.000.00
......................TATACTTTATATAGTCGGATATGCTTC..........................................................................................................................2711.000.001.000.00
.....................ATATACTTTATATAGTCGGATATG..............................................................................................................................2411.000.001.000.00
..........................................................................................................TGACTCGTGCA-------------------------------ACTCATGCTCCCGT.........2511.000.001.000.00
...................ATATATACTTTATATGGTCG....................................................................................................................................2050.200.000.200.00
........................TACTTTATATAGTCGGATA................................................................................................................................1911.000.001.000.00
.......................................................................................................TGATGACTCGTGCA-------------------------------ACTCATGCTCCCGC.........2811.000.001.000.00
........................................................................................................GATGACTCGTGCA-------------------------------ACTCATGCTCCCGT.........2711.000.001.000.00
....................TATATACTTTACATGGTCGG...................................................................................................................................2040.250.250.000.00
334 super_18:1191277-1191406 + 48.53
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGC-----------------------CTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-GAGCTTATAATTTAATGGT---GGATAGAGATTTTTAGTTACAACCGAACGTTACGAACTCTCCTTTTTCTTTTGGCAGTGCCGCTCAAAATGGTCAAAATAAATACATTTTAGT--------------------TGCCTCAGTTGCAGCTG
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..............................................................................................................TTTTAGT--------------------TGCCTCCCTTGCAGC..2212.000.002.000.00
..............................................................................................................TTTTAGT--------------------TGCCTCCCTTGCAGCTG2411.000.001.000.00
..................GGA---GGATAGAGATTTTTGGT.................................................................................................................2011.001.000.000.00
1901 super_39:231325-231462 - 46.74
TTGAA-CTTACTGTTT-AATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCC-----------CCGCCATATTCC
TGACTCCTTAGTGTAGTTGAAAAGAAAGTTTCAAAAATACAGATGAAGTTTCGGTGGCGA-AGCAGACTGGCTTCACGAAATAATTA---TTTTCC--TGACTTCCAATGCAATATTGCCCGGCGCCCTATTGCGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.................................AAAATACAGATGAAGTTTCGGT.........................................................................................2230.330.000.330.00
................................................TTTCGGTGGCGA-AGCAGACTG..........................................................................2130.330.000.330.00
.................................................TTCGGTGGCGA-AGCAGACTGG.........................................................................2130.330.000.330.00
...................AAAAGAGAGTTTCAAACA...........................................................................................................1840.250.000.250.00
2123 super_65:116723-116860 - 42.72
TTGAACTTACTGTTTAATAATGTTAAATACAGATAT----------------------ATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGT-CGGTATGGCTGCGATTGAGCTATG--ATCTGCATTTAATTATGGTCCCCGC---------CATATTCC
TGGA-TTGAGTGAC----------AAATTCAGGTAAGCGTTACAAAATAATTTACACAATAACTAAGCTT-AATTGAATAAAATATCCTAGCACCAGCGGT-----------T----TATAGCCTCTGTAAACAATCGTGGCGGTCGGTTTGAACTCACTGTTTC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
............AG----------AAATTCAGGTAAGCGC.............................................................................................................................1811.000.001.000.00
890 super_93:18865-19030 + 41.88
T-TGAACTTACT-GTTTAA------TAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCT-----------------------------GGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACCGATCTAAATCGTCTAAGTCACTATATCTTTATTTCACATAAATAACTTTAATTTGCCTTAGCAAA--TATGGTATGTGGTATGGTATATGGTATGGTAAATATGGTCGTTGGTATGGCTACGATTGAGCTTTGAT-TGCCTTTTTTCGAGCTCAGAGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..........................................................................................ATCGTxTGGTAAATATGGT............................................................1821.000.001.000.00
...........................................................................................TGGTATGGTAAGGATGGT............................................................1820.500.000.000.50
...............................................................................TGGTATGGTATATGGTATGGTT....................................................................2220.500.500.000.00
..................................................................................................................GTATGACTAGGATTGAGC.....................................1830.330.000.330.00
..............................................................................GTGGTATGGTAxAAGGTATGG......................................................................2020.500.500.000.00
2370 super_354:7846-8011 - 41.88
T-TGAACTTACT-GTTTAA------TAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCT-----------------------------GGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACCGATCTAAATCGTCTAAGTCACTATATCTTTATTTCACATAAATAACTTTAATTTGCCTTAGCAAA--TATGGTATGTGGTATGGTATATGGTATGGTAAATATGGTCGTTGGTATGGCTACGATTGAGCTTTGAT-TGCCTTTTTTCGAGCTCAGAGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..........................................................................................ATCGTxTGGTAAATATGGT............................................................1821.000.001.000.00
...........................................................................................TGGTATGGTAAGGATGGT............................................................1820.500.000.000.50
...............................................................................TGGTATGGTATATGGTATGGTT....................................................................2220.500.500.000.00
..................................................................................................................GTATGACTAGGATTGAGC.....................................1830.330.000.330.00
..............................................................................GTGGTATGGTAxAAGGTATGG......................................................................2020.500.500.000.00
1397 super_4:2517917-2518010 - 41.2
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCT--GGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
A--AACTT-------------------------------------TTTGCCTTGGCGGTGACCTGCGGAGGCGCGTCGGCATGGCTGCGATTGAGGTAAGATTTGCATTTAATCATGGTC-CCGCAATGTTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
....................................................................AGGCGxGTCGGCATGGCTG..............................................1890.110.000.000.11
2626 super_13584:304-397 - 41.2
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCT--GGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
A--AACTT-------------------------------------TTTGCCTTGGCGGTGACCTGCGGAGGCGCGTCGGCATGGCTGCGATTGAGGTAAGATTTGCATTTAATCATGGTC-CCGCAATGTTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
....................................................................AGGCGxGTCGGCATGGCTG..............................................1890.110.000.000.11
2483 super_2396:926-1062 - 39.97
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGG-----------------------CTACGACTTGCTGGCTC--GTCGGTATG-GCTGCGATTGAGCTATGATCTGC--ATTTAATTATGGTCCCCGCCATATTCC---------------------
TTTGTTT------------------------------------------CCTCTGTCAGGCTAATCAACTTTTCGCGACC-CAAAGTCACGACGACGACAATTAGGACTCGCGATTGACTCAGGATTGACAAATTTAGGTATGATTTACAAAATTTTACATGAAATCTATGTCAATCGAA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.....................................................................................................................ACTAAGGATTGACAGATT.............................................1812.000.000.002.00
1114 super_1024:1318-1375 + 38.43
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
---------------------------------------------------------------------CCCGTCGGTATGGCTGCGATTGAGTTATGATTTTCATT----TATGGTCTCCGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..........................................................................................GAGTTGTGATTTTGATT----T...................1860.170.000.170.00
215 super_8:2871349-2871406 + 38.43
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
---------------------------------------------------------------------CCCGTCGGTATGGCTGCGATTGAGTTATGATTTTCATT----TATGGTCTCCGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..........................................................................................GAGTTGTGATTTTGATT----T...................1860.170.000.170.00
1259 super_8739:111-172 + 36.62
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
--------------------------------------------------------------------GGTCGTTGGTATGGCTACGATTGAGCTTTGAT-TGCCTTTTTTCGAGCTCAGAGCCATATTCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
............................................................................GTATGACTAGGATTGAGC.....................................1830.330.000.330.00
434 super_28:365045-365133 + 35.71
TTGAACTTACTGTTTAATAAT---GTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGGAAGTCACAGTTTCGTGTTTCGGATCGATGCAAGACTATGGTTAAT----------------------------TCGTTGGGGTTCAGCTTGAGCTATGAGCTGCCTTCAATTAT-----------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.............................................................................................GAGATATGAGCTGCTTTC.......................1811.000.000.001.00
2361 super_293:2829-2907 - 33.68
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT-TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T------------TTAATAATTTCACATGCAGATATTTAATTTAAAATTGCCTTGGCGGTTAC---CTGGCGCATCGGTATGGCTGCGATTGAG--------------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head


droYak2 - 48 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
184 chr2h_random:1463679-1463807 + 78.03
TTGAACTTACTGTTTAATAATGTTAAATACAGATATAT-AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAACTCACTGTTTATTAATTTCACACACAGATAGAAAAATTAAAGTTGCCCGAGCTGCAACTTAATGGCTCATTAGTAGGGCTGCGATTGAGCTATGATTTGCATTT---CATGCTGCCCGCTATATTCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
8974 chrU:11905743-11905874 - 65.63
TTGAACTTACTGT--TTAATAATGTTAAA--TACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCA-TTTAATTATGGTCCCCGCCATATTCC
TTATACTCACGGGCCTTA-----GTTAAAGGTAAAAATGTATAATTTTATGTTGCCTTAGTTGCAACTGAAAAACTTATTAGTACGGCTACCATTAAGCTATGCTTTGCAATTTATTTATGCTCCCCGCCATATTTT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
225 chr2h_random:1837322-1837426 + 65.27
TTGAACTTACTGTTTAATAATGTTAAATACAGATATAT-AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
--------------------------ACACAGATATAAAAATTTAAGTTGTCTTAGCTGCAACTGGATAGCTCGTCGGTATGGCTACGATTGA-CTATGATTTGCATTTTATCATGCCTCTCGCCATATTCA
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.........................................................TGCAACTGGATAGCTCGTCGGTATG..................................................2561.000.500.000.330.000.17
.........................................................TGCAACTGGATAGCTCGTCGGTATGGT................................................2760.830.670.000.170.000.00
.....................................................TAGCTGCAACTGGATAGCTCGTCGG......................................................2560.670.670.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATT..................................................2560.500.500.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTATGGT................................................2460.500.500.000.000.000.00
.........................................................TGCAACTGGATAGCTTGTCGGTATGGT................................................2760.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATGG.................................................2660.330.330.000.000.000.00
...................................................CGTAGCTxCAACTGGATAGC.............................................................1960.330.000.170.000.000.17
.........................................................TGCAACTGGATAGCTTGTCGGTATG..................................................2560.330.000.000.330.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTCTG..................................................2560.170.170.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTGTG..................................................2560.170.170.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGCATT..................................................2560.170.170.000.000.000.00
...................................................CCTAGCTGCAACTGGATAGCTTGTCG.......................................................2660.170.000.000.170.000.00
...............................................................TGGATAGCTCGTCGGTATGGTT...............................................2260.170.170.000.000.000.00
........................................................CTGCAACTGGATAGCTCGTCGGTATG..................................................2660.170.000.000.170.000.00
...........................................................CAACTGGATAGCTCGTCGGTATGGT................................................2560.170.170.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTCTGGT................................................2460.170.170.000.000.000.00
3509 chrU:7773907-7774001 + 59.69
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
------------------------------------ATAATTTAAGTTGCCTCAGTTGCAACTAGCTAGCTCGTCGGTAAGGTTTCCATTGAGCTATGATTTGCTTTTTATCATGCTCCCTGCCATATTCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
........................................................................................TTGGGCTATGTTTTGCT..........................1740.250.000.000.000.250.00
3515 chrU:7789852-7789946 + 59.69
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
------------------------------------ATAATTTACGTTGCCTCAGTTGCAACTAGCTAGCTCGTCGGTAAGGTTTCGATTGAGCTATGATTTGCTTTTTATCATGCTCCCTGCCATATTCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................ATAATTTACGTTGCTTCGG............................................................................1930.330.000.000.330.000.00
........................................................................................TTGGGCTATGTTTTGCT..........................1740.250.000.000.000.250.00
3511 chrU:7776638-7776732 + 59.69
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
------------------------------------ATAATTTACGTTGCCTCAGTTGCAACTAGCTAGCTCGTCGGTAAGGTTTCGATTGAGCTATGATTTGCTTTTTATCATGCTCCCTGCCATATTCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................ATAATTTACGTTGCTTCGG............................................................................1930.330.000.000.330.000.00
........................................................................................TTGGGCTATGTTTTGCT..........................1740.250.000.000.000.250.00
5419 chr2h_random:3046300-3046407 - 59.59
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAA-TTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACACACTGTTTCTTATTTTCCCACACAGATATATAAATTTAAGT-TCCCTAGCTGCAACTGGATAGCTCGTCGGTATGGTT--AATTGA-CTATGATTTGCATTTTAT--------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...........................................TAAGT-TCCCTAGCTGCAACTGGATAGC.............................................................2733.003.000.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATG..................................................2561.000.500.000.330.000.17
.........................................................TGCAACTGGATAGCTCGTCGGTATGGT................................................2760.830.670.000.170.000.00
.....................................................TAGCTGCAACTGGATAGCTCGTCGG......................................................2560.670.670.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATT..................................................2560.500.500.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTATGGT................................................2460.500.500.000.000.000.00
...................................................CGTAGCTxCAACTGGATAGC.............................................................1960.330.000.170.000.000.17
.........................................................TGCAACTGGATAGCTTGTCGGTATG..................................................2560.330.000.000.330.000.00
...............................................T-TCCCTAGCTGCAACTGGATAGCTCG..........................................................2630.670.670.000.000.000.00
.........................................................TGCAACTGGATAGCTTGTCGGTATGGT................................................2760.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATGG.................................................2660.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGCATT..................................................2560.170.170.000.000.000.00
........................................................CTGCAACTGGATAGCTCGTCGGTATG..................................................2660.170.000.000.170.000.00
................TTATTTTCCCACACAGATATATAAATT.........................................................................................27110.090.090.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTGTG..................................................2560.170.170.000.000.000.00
.................TATTTTCCCACACAGATATATAAATT.........................................................................................26110.090.090.000.000.000.00
..............................................................................TATGGTT--AATTGA-CTATGATTTGCATT........................2730.330.000.000.330.000.00
...................................................CCTAGCTGCAACTGGATAGCTTGTCG.......................................................2660.170.000.000.170.000.00
...................................TATAAATTTAAGT-TCCCTAGCTGCAAC.....................................................................2730.330.330.000.000.000.00
..............................................................................TATGGTT--AATTGA-CTATGATTTGCA..........................2530.330.000.000.330.000.00
...................................TATAAATTTAAGT-TCCCTAGCTGC........................................................................2430.330.330.000.000.000.00
...........................................................CAACTGGATAGCTCGTCGGTATGGT................................................2560.170.170.000.000.000.00
.......................................................................TCGTCGGTATGGTT--AATTGA-CTATTA................................2630.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTCTG..................................................2560.170.170.000.000.000.00
...................................................................TAGCTCGTCGGTATGGTT--AATTG........................................2330.330.330.000.000.000.00
...............................................T-ACCCTAGCTGGAACTGGATAGCTCG..........................................................2630.330.330.000.000.000.00
...............................................T-TCCCTAGCTGCCACTGGATAGCTCG..........................................................2630.330.330.000.000.000.00
..........................................TTAAGT-TCCCTAGCTGCAACTGG..................................................................2330.330.330.000.000.000.00
...............................................................TGGATAGCTCGTCGGTATGGTT--.............................................2260.170.170.000.000.000.00
......................TCCCACACAGATATATAAATTTAAGT-...................................................................................26140.070.070.000.000.000.00
..............................................................CTGGATAGCTCGTCGGTATGGTT--AAT..........................................2630.330.330.000.000.000.00
............................................AAGT-TCCCTAGCTGCAACTGGATAGCC............................................................2730.330.330.000.000.000.00
...................CTTTCCCACACAGATATATAAATT.........................................................................................24140.070.070.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTCTGGT................................................2460.170.170.000.000.000.00
.................................................TCCCTAGCTGCAACTGGATAGCTCGTC........................................................2730.330.330.000.000.000.00
5423 chr2h_random:3074528-3074635 - 59.59
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAA-TTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACACACTGTTTCTTATTTTCCCACACAGATATATAAATTTAAGT-TCCCTAGCTGCAACTGGATAGCTCGTCGGTATGGTT--AATTGA-CTATGATTTGCATTTTAT--------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...........................................TAAGT-TCCCTAGCTGCAACTGGATAGC.............................................................2733.003.000.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATG..................................................2561.000.500.000.330.000.17
.........................................................TGCAACTGGATAGCTCGTCGGTATGGT................................................2760.830.670.000.170.000.00
.....................................................TAGCTGCAACTGGATAGCTCGTCGG......................................................2560.670.670.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATT..................................................2560.500.500.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTATGGT................................................2460.500.500.000.000.000.00
...................................................CGTAGCTxCAACTGGATAGC.............................................................1960.330.000.170.000.000.17
.........................................................TGCAACTGGATAGCTTGTCGGTATG..................................................2560.330.000.000.330.000.00
...............................................T-TCCCTAGCTGCAACTGGATAGCTCG..........................................................2630.670.670.000.000.000.00
.........................................................TGCAACTGGATAGCTTGTCGGTATGGT................................................2760.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATGG.................................................2660.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGCATT..................................................2560.170.170.000.000.000.00
........................................................CTGCAACTGGATAGCTCGTCGGTATG..................................................2660.170.000.000.170.000.00
................TTATTTTCCCACACAGATATATAAATT.........................................................................................27110.090.090.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTGTG..................................................2560.170.170.000.000.000.00
.................TATTTTCCCACACAGATATATAAATT.........................................................................................26110.090.090.000.000.000.00
..............................................................................TATGGTT--AATTGA-CTATGATTTGCATT........................2730.330.000.000.330.000.00
...................................................CCTAGCTGCAACTGGATAGCTTGTCG.......................................................2660.170.000.000.170.000.00
...................................TATAAATTTAAGT-TCCCTAGCTGCAAC.....................................................................2730.330.330.000.000.000.00
..............................................................................TATGGTT--AATTGA-CTATGATTTGCA..........................2530.330.000.000.330.000.00
...................................TATAAATTTAAGT-TCCCTAGCTGC........................................................................2430.330.330.000.000.000.00
...........................................................CAACTGGATAGCTCGTCGGTATGGT................................................2560.170.170.000.000.000.00
.......................................................................TCGTCGGTATGGTT--AATTGA-CTATTA................................2630.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTCTG..................................................2560.170.170.000.000.000.00
...................................................................TAGCTCGTCGGTATGGTT--AATTG........................................2330.330.330.000.000.000.00
...............................................T-ACCCTAGCTGGAACTGGATAGCTCG..........................................................2630.330.330.000.000.000.00
...............................................T-TCCCTAGCTGCCACTGGATAGCTCG..........................................................2630.330.330.000.000.000.00
..........................................TTAAGT-TCCCTAGCTGCAACTGG..................................................................2330.330.330.000.000.000.00
...............................................................TGGATAGCTCGTCGGTATGGTT--.............................................2260.170.170.000.000.000.00
......................TCCCACACAGATATATAAATTTAAGT-...................................................................................26140.070.070.000.000.000.00
..............................................................CTGGATAGCTCGTCGGTATGGTT--AAT..........................................2630.330.330.000.000.000.00
............................................AAGT-TCCCTAGCTGCAACTGGATAGCC............................................................2730.330.330.000.000.000.00
...................CTTTCCCACACAGATATATAAATT.........................................................................................24140.070.070.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTCTGGT................................................2460.170.170.000.000.000.00
.................................................TCCCTAGCTGCAACTGGATAGCTCGTC........................................................2730.330.330.000.000.000.00
5418 chr2h_random:3036353-3036460 - 59.59
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAA-TTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACACACTGTTTCTTATTTTCCCACACAGATATATAAATTTAAGT-TCCCTAGCTGCAACTGGATAGCTCGTCGGTATGGTT--AATTGA-CTATGATTTGCATTTTAT--------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...........................................TAAGT-TCCCTAGCTGCAACTGGATAGC.............................................................2733.003.000.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATG..................................................2561.000.500.000.330.000.17
.........................................................TGCAACTGGATAGCTCGTCGGTATGGT................................................2760.830.670.000.170.000.00
.....................................................TAGCTGCAACTGGATAGCTCGTCGG......................................................2560.670.670.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATT..................................................2560.500.500.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTATGGT................................................2460.500.500.000.000.000.00
...................................................CGTAGCTxCAACTGGATAGC.............................................................1960.330.000.170.000.000.17
.........................................................TGCAACTGGATAGCTTGTCGGTATG..................................................2560.330.000.000.330.000.00
...............................................T-TCCCTAGCTGCAACTGGATAGCTCG..........................................................2630.670.670.000.000.000.00
.........................................................TGCAACTGGATAGCTTGTCGGTATGGT................................................2760.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTATGG.................................................2660.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGCATT..................................................2560.170.170.000.000.000.00
........................................................CTGCAACTGGATAGCTCGTCGGTATG..................................................2660.170.000.000.170.000.00
................TTATTTTCCCACACAGATATATAAATT.........................................................................................27110.090.090.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTGTG..................................................2560.170.170.000.000.000.00
.................TATTTTCCCACACAGATATATAAATT.........................................................................................26110.090.090.000.000.000.00
..............................................................................TATGGTT--AATTGA-CTATGATTTGCATT........................2730.330.000.000.330.000.00
...................................................CCTAGCTGCAACTGGATAGCTTGTCG.......................................................2660.170.000.000.170.000.00
...................................TATAAATTTAAGT-TCCCTAGCTGCAAC.....................................................................2730.330.330.000.000.000.00
..............................................................................TATGGTT--AATTGA-CTATGATTTGCA..........................2530.330.000.000.330.000.00
...................................TATAAATTTAAGT-TCCCTAGCTGC........................................................................2430.330.330.000.000.000.00
...........................................................CAACTGGATAGCTCGTCGGTATGGT................................................2560.170.170.000.000.000.00
.......................................................................TCGTCGGTATGGTT--AATTGA-CTATTA................................2630.330.330.000.000.000.00
.........................................................TGCAACTGGATAGCTCGTCGGTCTG..................................................2560.170.170.000.000.000.00
...................................................................TAGCTCGTCGGTATGGTT--AATTG........................................2330.330.330.000.000.000.00
...............................................T-ACCCTAGCTGGAACTGGATAGCTCG..........................................................2630.330.330.000.000.000.00
...............................................T-TCCCTAGCTGCCACTGGATAGCTCG..........................................................2630.330.330.000.000.000.00
..........................................TTAAGT-TCCCTAGCTGCAACTGG..................................................................2330.330.330.000.000.000.00
...............................................................TGGATAGCTCGTCGGTATGGTT--.............................................2260.170.170.000.000.000.00
......................TCCCACACAGATATATAAATTTAAGT-...................................................................................26140.070.070.000.000.000.00
..............................................................CTGGATAGCTCGTCGGTATGGTT--AAT..........................................2630.330.330.000.000.000.00
............................................AAGT-TCCCTAGCTGCAACTGGATAGCC............................................................2730.330.330.000.000.000.00
...................CTTTCCCACACAGATATATAAATT.........................................................................................24140.070.070.000.000.000.00
............................................................AACTGGATAGCTCGTCGGTCTGGT................................................2460.170.170.000.000.000.00
.................................................TCCCTAGCTGCAACTGGATAGCTCGTC........................................................2730.330.330.000.000.000.00
3513 chrU:7782502-7782596 + 58.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
------------------------------------ATAATTTACGTTGCCTCAGTTGCAACTAGCTAGCTCGTCGATAAGGTTTCGATTGAGCTATGATTTGCTTTTTATCATGCTCCCTGCCATATTCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................ATAATTTACGTTGCTTCGG............................................................................1930.330.000.000.330.000.00
........................................................................................TTGGGCTATGTTTTGCT..........................1740.250.000.000.000.250.00
10132 chrX:8990801-8990935 - 46.43
TTGAAC---------TTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTC--GGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTGGCCGGCTAAAATAATTTGTTAACAAAATGCACTACACACATCTAGGCGTTGTGTGCTTGGCTAATTGCCGCAGGCACTCTGCTTTTTGCCGTAGATATACCACATCTCTGTTTTTTTTTGTTTAC-------CATTTC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..............ATAATTTxTTAACTAAATG.............................................................................................................1812.000.001.000.001.000.00
..............ATAATTTxTTAACAAAATGGA...........................................................................................................2012.000.000.000.002.000.00
..............................................................................................................ACTGGTTTTTTTTGTT................1660.170.000.000.000.170.00
6750 chr3h_random:825368-825466 - 39.84
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACAGTTTTTATTTTAATTCCACAAATGGATA---AATTAATGTTGCCTCAG-------TTGCAAGCTCTTCGGTATGGCCACGGT-AAGCAATGATTTCCATTTTA---------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
......................................AATTGATGTTGCCTCAA-------T....................................................................1830.330.000.000.000.000.33
123 chr2h_random:717103-717188 + 35.61
TTGAACT---TACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCCG-AGTCGATTTGGCTATGT-CCGTCTGTCCGTCTGTCTGTCCG----------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.......................TTCTTGATCAGGATCAATAGCCG-AG.....................................................................................25430.770.580.000.120.070.00
.......................TTCTTGATCAGGACCAATAGCCG-AG.....................................................................................25430.490.420.020.050.000.00
.......................TTCTTGATCAGGATCAGTAGCCG-AG.....................................................................................25280.640.540.000.110.000.00
.......................TTCTTGATCAGGACCAATAGCCG-AGT....................................................................................26390.210.100.000.050.000.05
..........................TTGATCAGGATCAATAGCCA-AGTTGA.................................................................................26260.310.230.000.080.000.00
.......................TTCTTGATCAGGATCAATAGCCG-AGT....................................................................................26390.210.130.030.050.000.00
...................TATATTCTTGATCAGGATCAGC.............................................................................................22450.130.000.020.020.020.07
...................TATATTCTTGATCAGGACCAATAGCC.........................................................................................26480.130.060.000.020.000.04
..........................TTGATCAGGATCAATAGCCA-AGTTGAT................................................................................27260.190.190.000.000.000.00
.......................TTCTTGATCAGGATCAATAGCCG-AGTC...................................................................................27360.140.140.000.000.000.00
...........................................................CATGT-CCGTCTGTCCGTCCGT.....................................................2141.250.000.000.750.000.50
..........................TTGATCAGGACCAATAGCCG-AGTCG..................................................................................25370.110.050.000.030.030.00
........................TCTTGATCAGGACCAATAGCCG-AGTC...................................................................................26360.110.060.000.030.000.03
..................ATATATTCTTGATCAGGATCA...............................................................................................21420.100.020.000.000.000.07
...............................................................T-CCGTCTGTCCGTCCGTCTGTC................................................2214.003.000.000.000.001.00
.................TATATATTCTTGATCAGGATC................................................................................................21420.100.000.000.050.000.05
..........................TTGATCAGGATCAATAGCCG-AGTCG..................................................................................25370.110.110.000.000.000.00
.......................TTCTTGATCAGGATCAGTAGCCG-AGT....................................................................................26260.150.080.000.080.000.00
........................................................................TCCGTCCGTCTGTCCG----------------------------------------------1890.330.000.000.000.000.33
.........................................................GCCATGT-CCGTCTGTCCGTCC.......................................................2131.000.000.000.670.330.00
...................TATATTCTTGATCAGGACC................................................................................................19440.070.000.000.000.000.07
.............................................................TGT-CCGTCTGTCCGTCTGTCCGTC................................................2413.003.000.000.000.000.00
....................................................................TCTGTCCGTCCGTCTGTC................................................1860.500.330.000.000.000.17
...............................................................T-CTGTCCGTCCGTCTGTC....................................................1860.500.330.000.000.000.17
.......................TTCTTGATCAGGATCAATAGCGG-AGT....................................................................................26250.120.120.000.000.000.00
..........................TTGATCAGGATCAGTAGCC.........................................................................................19340.090.000.000.000.000.09
....................................................................TCCGTCCGTCTGTCCGTC................................................1890.330.000.000.000.000.33
..........................................................CCATGT-CCGTCTGTCCGTCCG......................................................2131.000.000.000.000.001.00
...........................................................TCCGT-CCGTCTGTCCGTC........................................................1890.330.000.000.000.000.33
.......................................................TGACCATGT-CCGTCTGTCCGTCTGTC....................................................2613.003.000.000.000.000.00
...........................................................TCTGT-CCGTCTGTCCGTCTGTCCGT.................................................2513.002.000.000.000.001.00
...............TATATATATTCTTGATCAGGA..................................................................................................21490.060.000.000.040.000.02
..........................................................CCATGT-CCGTCTGTCCGTC........................................................1931.000.000.000.000.001.00
........................TCTTGATCAGGATCAATAGCCG-AG.....................................................................................24430.070.070.000.000.000.00
.......................TTCTTGATCAGGACCAATAGCCG-AGTC...................................................................................27360.080.080.000.000.000.00
9159 chrU:14805351-14805444 - 35.22
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TACACAACACT-------------------------------------AAATAAGTTGCAACCGGATATCTCGTCGGTATGGCTTAAA-TGGACAATAACTTCCATTTTATCATGCTCCCCGTCATATTCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
6584 chr2R:6846279-6846367 - 32.2
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTA---AAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTAACAATGTCGAGCATTGCTATTTGTCCCAACTAAATATTTATGCCAGCTGTCCATGTTCC-ATGTCCATGTTCATCTGCATGTCCACG--------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
6748 chr3h_random:806176-806235 - 30.76
TTGAACTTACTGTTTAATAATGTTAAA--TACAGATATAT-AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACTCACAGATT--TTATTTTAACCGTACAAATTGATCAATAAACGTTGCCTCAGTTAC------------------------------------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.............................TACAAATTTATCAATAAACGTA...................................................................................2211.000.000.001.000.000.00
5372 chr2h_random:2445317-2445407 - 30.53
TTGAACTTACTGTTTAATAATGTTAAATACA--GA-TATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCACAA----TTTGTAATCAAATTAAAGGCACTAATTAATAAATTTCAGTTGCCTTTGTTGCAACTGTTAGTCTTGTCAGTATAGCTACGATTGA---------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................................................TGTCAGTATAGTTACGAA..........................................1811.000.001.000.000.000.00
345 chr2h_random:3719843-3719901 + 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T----------GTTTAATAACCACAGATATAGATGCATAGTTGATACTGGCTTTTCGATAA-------------------------------------------ACTTGATG-------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...................ACCACAGATATAGATGCATAGTTGATAC....................................................................................2811.000.000.001.000.000.00
...................ACCACAGATATAGATGCATAGTTGA.......................................................................................2511.000.000.001.000.000.00
......................ACAGATATAGATGCATAGTTG........................................................................................2111.000.000.001.000.000.00
...................ACCACAGATATAGATGCATAGTTG........................................................................................2411.001.000.000.000.000.00
..............TAATAACCACAGATATAGATGCATAG...........................................................................................2620.500.000.000.500.000.00
.....................CACAGATATAGATGCATAGTTGATAC....................................................................................2611.000.000.001.000.000.00
1973 chr3L_random:2041177-2041243 + 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCAGATGGAAGGAATAATAATTTAATATTCAAATGTGTACTTAAAACTGCGTCGGTTGTACATTGAT----------------------------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.......................AATATTCAAATGAGAACTT.........................................................................................1913.000.000.000.000.003.00
........................ATATTCAAATGAGAACTT.........................................................................................1811.000.000.000.000.001.00
.......................AATATTCAAATGAGAACT..........................................................................................1811.000.000.000.000.001.00
8415 chrU:3035982-3036054 - 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATA-----TTCC
TTTTGCGTACTTTGTAGCGATGGTGGTTTGTCTTATGGATCTATTT---------------------------------------------------------------TTTTTGTTACCAGCGGTAATACATGCT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
......CTAGTTTGTAGCGATGGT................................................................................................................1830.330.000.000.000.330.00
.....................................................................................................................CCAAGCGGTAATACATGC.1820.500.000.000.000.500.00
497 chr2L:16942666-16942715 + 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-----------------------AAATCGAGTTAACTGATTAAAGTTGCCTGAGCCAGCAGTTCGTGCCTCG----------------------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.........................AATCGAGTTCACTGAGTA........................................................................................1811.000.000.000.001.000.00


droEre2 - 41 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1738 scaffold_4929:26255623-26255753 + 78.18
TTGAACTTACTGTTTAATAATGTTAAATACAGATATAT-AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TT-AACTCACTGTTTCTTAATTTCCCACACAGATATAAAAATTTAAGGTGCCCTAGCTGCAACTTGATAGCTCGACGGTATGGCTACGATTGAGCTATGATTTCCATTTTACCATGCTCCCCGCCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
............................................................................................ATCTATGATTACCATTTT......................1811.001.000.000.000.00
819 scaffold_4784:24171307-24171437 + 74.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATA-ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACTCACTGTTTCTTAATTTCCGGCACAGATTTATAAATTTATGTTGCTCTATCTGCAACTTAATAGCTCGTCGGTATGGATACGATTGA-CTATGATTTGCTTTTTATCATGCTCCCCGCCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
2525 scaffold_4784:22802832-22802957 - 72.32
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACTCACTGTTCCTTAATTTTCCACACAGA-----AATTTAAGTTGCCCTAGGTGCAACTTGATAGCTCGTCGGTATGGCTACGATTGTGCTATGATATGCATTTTCATACTGCTCCCCCCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
............................................................................GTTTGGCTACGxTTGTGCT....................................1830.330.000.000.000.33
2796 scaffold_4845:1016186-1016313 - 72.16
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAA-TTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATC-TGCA-TTTAATTATGGTCCCCGCCATATTCC
TCTAACTCACTGTTTTTTAATTTCCCGCACAGATATATAAAGTTATGTTACCCTAGCTGCAACTT--CAACTCGTCGGTATGGCTACGATTGA-CTATGATTATA-ATTTTAA-TTTGCTCCCCGC-ATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
2810 scaffold_4845:1439834-1439952 - 72.16
T-TGAACTTACTGTTTAATAATGTTAAATACAGATATATA-ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGTTCAGTTACTA---------GTTGGCTATATATATATAAATTTAAGT----TTAGCTGCAACTTGATAGCTCGTCGGTATGGCTACGATTGA-CTATGATTTGCATTTAATCATGCTCCCCGCCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.......TCACTA---------GTTTGCTATATA...................................................................................................1811.001.000.000.000.00
1036 scaffold_4845:2047605-2047731 + 69.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACTCACTGTATCCTAATTTCCTACAGAGATATATAATTTTAACTTTTCCTACTTGCAACTATATAGCTCGTCGGTATGGCTACGATTGAGCTATGAT-----TATTATTATGCTTCCAGGCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...................................................................................................AT-----TATAATTGTGCTTCCAG.........1930.330.000.000.000.33
3323 scaffold_4929:22897434-22897564 - 68.75
TTGAACTTACTGTTTAATAATGTTAAATACAGATATA--------TAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTA-ATTATGGTCCCCGCCATATTCC
T----------GTTCCTTAATTTCCCACACAGATATAATTTATATAAATTAAAGTTTCCCTAGCTGCAACTTGATGGCTCGTCGGTATGGCTACGATTAAGCTATGATTTACATTTCCATACTGCTTCCCGCCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
2798 scaffold_4845:1019940-1020067 - 68.4
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT-TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACTCACCGTTTCTTCATTTCCCGCACAGATATATAAAGTTACGTTACCCTAGGTGCAACTT--CAACTCGTCGGAATAGCTACGATTGA-CTATGATTATAATTTTAATTTGCTCCCCG-CATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
2782 scaffold_4845:706760-706888 - 68.12
TTGAACTTACTGTTTA----------------------------------ATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCC-GCCATATTCC
TGTAACTCACTGTTTCTAAATTTTCTACTATATAATATAATTTCTTCTATATAATGATAAATATAAA-------------------------------------ACGTCGGTATGGCTACGATTGATCTATGATTTGCATTAAATCATGCTCCCCGGCCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.......................................ATTTCTTCGCTATAATGA.............................................................................................................1830.330.000.000.000.33
3326 scaffold_4929:22909887-22910003 - 57.03
TTGAACTTACTGTTTAATAATGTTAAAT-----ACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACTCACAATTTTTAAA--TTAAGGTCGAAATTAATAC---ATTTTAGTTGCCTTAGTTGCAACTCAC-------TCAGTATAGC-----TTAAGCTATGACTTGCATACTATCATGCTCCC--CCATATTTC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
........................................C---ATTTTAATTGCCCTAGT...........................................................................1811.001.000.000.000.00
2553 scaffold_4784:23187818-23187925 - 53.19
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
---AACTCACTGTTTTTTTATTTCCCACACAGATATA-AATTTAAGTTGCC----------CTTGATAGCTCATCGGAATGGTTACGATTGGCCTATGATTTGCGTTTTATCATGCTCCCC----------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
................................ATCTA-AATTTAAGTTGCT----------......................................................................1866.500.000.000.006.50
................................ATATA-AATTTAAGTTGCT----------G.....................................................................1960.170.000.000.000.17
767 scaffold_4784:23311858-23311964 + 52.16
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATA-ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGTAACTCACTGCTTCATAATTTCCCCCACAGATATATAAATTTAAGTTGCCCTAGGTGCAACTTGATAGCTCGTCGGTATGGCTACGATTGAGT-------------------------ACGACATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..................................ATCTAAATTTAAGTTGCT................................................................................1866.500.000.000.006.50
..................................ATATAAATTTAAGTTGCTG...............................................................................1960.170.000.000.000.17
1027 scaffold_4845:1948996-1949110 + 49.18
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGC-----------TACGACTTGCTGGCTCGTCGGTATGGCT---GCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T--------------ACTAATACTAAATACTAATACATAATTTGAAAGGTCTTGACATAACCTACAAAACGACGCTATGCATGATCAGTTTGGATATTGCG-TTTAACAGTTATAGACGTGTAAACATGG---------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.................................................................................................TGCG-TTCAACAGTTATAGACG..........................2133.330.000.000.003.33
.................................................................................................TGCG-TTCAACAGTTGTAGACG..........................2131.000.000.000.001.00
......................................................................................................TTCAACAGTTATAGACGTGTA......................2131.000.000.000.001.00
................................................................................ATGATTAGTTTGGATATTGCG-...........................................2130.670.000.000.000.67
............................................................................ATGCATGATTAGTTTGGATAT................................................2130.670.000.000.000.67
........................................................................................................CAACAGTTATAGACGTGTAAA....................2130.670.000.000.000.67
........................................TTTGAAAGGTCTTGACATAAC....................................................................................2140.250.000.000.000.25
................................................................................................TTGCG-TTCAACAGTTATAGACG..........................2230.330.000.000.000.33
...............................................................................CATGATTAGTTTGGATATTGC.............................................2130.330.000.000.000.33
..........................................TGAAAGGTCTTGACATAACCTACA...............................................................................2440.250.000.000.000.25
......................................................................GACGCTATGCATGATTAGTT.......................................................2030.330.000.000.000.33
..................................................................................GATTAGTTTGGATATTGC.............................................1830.330.000.000.000.33
................................................................................................TTGCG-TTCAACAGTTATAG.............................1930.330.000.000.000.33
....................................ATAATTTGAAAGGTCTTGACA........................................................................................2140.250.000.000.000.25
...............................................................................................ATTGCG-TTCAACAGTTATAGA............................2130.330.000.000.000.33
......................................................ACATAACCTACAAAACGACGCT.....................................................................2240.250.000.000.000.25
.................................................................................TGATTAGTTTGGATATTGCG-T..........................................2130.330.000.000.000.33
....................................ATGATTTGAAGGGTCTTGACA........................................................................................2140.250.000.000.000.25
................................................................................................TTGCG-TTCAACAGTTATAGA............................2030.330.000.000.000.33
............................................................................ATGCATGATTAGTTTGGATATTGC.............................................2430.330.000.000.000.33
............................................................................................................AGTTATAGACGTGTAAACA..................1930.330.000.000.000.33
............................................................................................................AGTTATAGACGTGTAAACAT.................2020.500.500.000.000.00
.........................................................................................................AACAGTTATAGACGTGTAAA....................2030.330.000.000.000.33
.................................................................................TGATTAGTTTGGATATTGCG-TT.........................................2230.330.000.000.000.33
............................................................................................GATATTGCG-TTCAACAGTTAT...............................2130.330.000.000.000.33
..........................................................................................................ACAGTTATAGACGTGTAAACA..................2130.330.000.000.000.33
....................................................................................................G-TTCAACAGTTATAGACGTGT.......................2130.330.330.000.000.00
..................AATTCTAAAxACTAATACAT...........................................................................................................1911.001.000.000.000.00
.................................................................................................TGCG-TTCAACGGTTATAGACG..........................2130.330.000.000.000.33
..............................................................................................TATTGCG-TTCAACAGTTATAGACG..........................2430.330.330.000.000.00
............................................................................ATGCATGATTAGTTTGGATATTTC.............................................2430.330.330.000.000.00
................................ATACATAATTTGAAAGGT...............................................................................................1840.250.000.000.000.25
.........................................................TAACCTACAAAACGACGCTAT...................................................................2140.250.000.000.000.25
.........................................TTGAAGGGTCTTGACATAACC...................................................................................2140.250.000.000.000.25
....................................ATAATTTGAAAGGTCTTG...........................................................................................1840.250.000.000.000.25
.........................................................................................TTGGATATTGCG-TTCAACAGT..................................2130.330.000.330.000.00
.............................................................................................................GTTATAGACGTGTAAACATG................2020.500.000.000.000.50
............................................................................................................AGTTATAGACGTGTAAACATGG---------------2220.500.000.000.000.50
...................................CATAATTTGAAAGGTCTTGACA........................................................................................2240.250.000.000.000.25
2616 scaffold_4784:24610659-24610767 - 47.76
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGGCCATACGGCTAAATACTGCTAAATACGGCTAAATACGCATATTTGCGTCAA-----ATGTGCTGGCGA-GCACGCTGCCAGCAACTGTACTAGGCCGCGCAGTGAACCGTG----------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.....................................................................................CATCTGTACTAGGCCGCGCA..........................2011.000.000.000.001.00
.............................................................TGTGCTGGCGA-GCACGCTGCCCG..............................................2311.001.000.000.000.00
780 scaffold_4784:23595129-23595206 + 46.4
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
---------------------------------------------GTTTCCCTAGCTGCAACTTGATAGC--------ATGGCTACGATTGAGCTATGATTTGCATTTTATCATGCTCCCCGCCATATTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
396 scaffold_4770:1356179-1356321 + 45.42
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAA----------TTAAAGTTGCCTTGGCTACGACTTG----------CTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
---AACTTAGTAAATAATATCTTAAAACA--TACAAGAAATATGTTGCGTTTAAATTTG--TTTGATACAATTTTTAGTTCAGCTTTAACAGACCGTTGAAGTTTCAGATAGATTCTGGTTG--AAATAAGTAGTGAGCCCACTGTATATA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
........................................................................TTTTAGTTCAGCTTTTACAG...........................................................2012.000.000.000.002.00
.......................................................................TTATTAGTTCAGCTTTTACAG...........................................................2111.000.000.000.001.00
.......................................................................................TACAGACCGTTGAAGTTTCAG...........................................2111.000.000.000.001.00
.....................................AAATTTGTTGCGGTTAAA................................................................................................1811.000.000.000.001.00
.....................................ATATATGTTGCTTTTAAAT...............................................................................................1911.001.000.000.000.00
................................................................................CAGCCTTTACAGACCGTTGAA..................................................2111.000.000.000.001.00
...............................TACAAGAAAAATGTTGCGTTT...................................................................................................2111.000.000.000.001.00
...................................................................................CTTTTACAGACCGTTGAGGTT...............................................2111.000.000.000.001.00
....................................................................................CTTTACAGACCGTTGAAGTTT..............................................2111.000.000.000.001.00
.................................................................................AGCTTTTACAGACCGTTGAAG.................................................2111.000.000.000.001.00
....................................................................................TTTTACAGACCGTTGAAGTT...............................................2011.000.000.000.001.00
........................................................................................ACAGACCGTTGAAGTTTCAGA..........................................2111.000.000.000.001.00
1179 scaffold_4845:3951126-3951249 + 45.23
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTT---GGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGGATGTAACGATGTAACAGCTATTTGTCCCAACTAAATATTTGTGCCAGCTGGCCGTGTTCCACGTCCATGTTCATCTGCATGTCCACTTCCATG-----T---CC--ACTGCCATGTCCACTGCCATGTCCA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
1675 scaffold_4929:24624157-24624267 + 44.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGC------------TA-TGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTA-CTTGACCAAACAAAAAATCCAAATCCAAATCCAGTCTTTAATT------------------------------TATGGCACAAATTAATCATTTTATGTTGCCATAGATTTGCATTT--TCATGCTCCCAGAC-TATTCA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
....................................................................................CAAATTGATCATTTTxTGTTGC......................................2130.330.000.000.000.33
1649 scaffold_4929:23820636-23820749 + 42.66
TTGAACTTACTGTTTAATAATGTTAAATACAGATATAT--------------AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTTAGCTTAT---GTATGATTGTCCAATTCTAATTTATGGCATAAATTAATCAATTTCAGTTGCCTTAGTTGCAACT-GCAAAGTTGTCAGTAAAGCAACTAT---------------------------TCCCTGCCATATTTC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
3325 scaffold_4929:22907599-22907688 - 40.64
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACAGCCTCACA-TTTAAAACTG---------------------------------TTGCAACTGTCAAGCTCGTCAGTATAGCT-----TAAGGTATGACATGCATACTATCTAGCTCTC--CCATATTTC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.............................................................................................................ATCTAGCACTC--CCATGTT..1811.001.000.000.000.00
............................................................................................................TATCTAGCACTC--CCAAATT..1911.001.000.000.000.00
2831 scaffold_4845:1837494-1837610 - 39.96
TTGAACTT---ACTGTTTAATAATG------TTAAATACAGATATATAATTAAAGTTGC---CTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCAT--T-TAATTATGGTCCCCGCCATATTCC
TTTTACTCTGGATTGCTTAACAATGATTGAGTTAAGTTCAAACACA--ATTTACATTAATACGAAAAATAAGACT-----------------------AGTTGAACTATAATTTCAGCGCCAGGACTAGCGGCGACGCCGAA----
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...................................................................................................GTTGxACTATAGTTTCAGCG...........................1911.000.001.000.000.00


droFic1 - 40 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
335 scf7180000453278:52662-52792 + 53.52
TTGAACTTACTGTTTAATAATGTTAAATACA---GATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCAT---TTAATTATGGTCCCCGCCATAT-TCC
TCTAACTCACTTTTTACAAAATTTACACAAAATTAATACTCGGTTAAAATTGTC-CGTCTACCACTTT------TGCCTTTTCGGGTACAACTGAACGGTGATCCGTATGATCACGCCATGTTCCCTAACATCTTTTC
SizeHit CountTotal Norm
695 scf7180000453957:6966-7091 + 52.01
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAA-----TTATGGTCCCCGCCATATTCC
---AACTCACTTGTTCACAAATTTCACAAAATTTCTACTAGTAAGAATCGTCCGTCTACCACGT------TTGTCTTCTTGGGTACTACTGAACGGTGATCCGTAT--AATCACGCAATGTTCCCTACCATCTTCC
SizeHit CountTotal Norm
1487 scf7180000453853:22659-22776 - 51.88
TTGAACTTACTGTTTAATAATGTTAAATACA---GATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACTCACTTTTTACAAAATTTACACAAAATTAATACTCGGTTAAAATTGTC-CGTCTACCACTTT------TGCCTTTTCGGGTACAACTGAACGGTGATCCA--TATGATCA-------CGCCATGTTCC
SizeHit CountTotal Norm
1667 scf7180000454019:3069-3197 - 51.8
TTGAACTTACTGTTTAATAA--TGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTC-GGTATGGCTGCGATTGAGCTAT--GATCTGCATTTAATTATGGTCCCCGCCATAT-TCC
TCCAACTCACTTTTTCACAAAATTTGCACAACCACTACGAGGTTAAAT-TCCCACGTCTATCGTGT-CCGTCTTTTCTTGTACTACTACCGGTGATCCGTATAAT------CACGCCATGTTCCCTACCATCTTTCC
SizeHit CountTotal Norm
166 scf7180000452262:314-439 + 51.3
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAA-----TTATGGTCCCCGCCATATTCC
---AACTCACTTGTTCACAAATTTCACAAAATTTCTACTAGTAAGAACTGTCCGTCTACCACGT------TTGTCTTCTTGGGTACTACTGAACGGTGATCCGTAT--AATCATGCCATGTTCCCTACCATCTTCC
SizeHit CountTotal Norm
1192 scf7180000453108:13804-13932 - 51.06
TTGAACTTACT--GTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGT----ATGGCTGCGATTGAGCTATGATCTGCATTT-------AATTATGGTCCCCGCCATAT-TCC
AAAAACTAACTCACTTTAATGACCTTAACCACAAATA----------ATTTCTTCCACTACGTCC--GTTGCTCAA--GTTTTACTGGGCACAACTAAACGGTGATCCGTTTCTTGCACGCCG--TTGTTCCCTACCATCTTTCC
SizeHit CountTotal Norm
1498 scf7180000453873:1315-1442 - 50.71
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATA-ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCA---TTTAATTATGGTCCCCGCCATATTCC
ACTAACTCACTTTTCACAAAAGTTTCACAATGCCACTACGAGTA-------CAAATCCCCGTCCACCACGCTTGTCTTTTCCGATACCACTAAACTCTGATCCGTAATATCACGCCATGTGCCCTACCATCTCAC
SizeHit CountTotal Norm
1582 scf7180000453930:431461-431587 - 49.53
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTC-GGTATGGCTGCGATTGAGCTATG-ATCTGCATTTAATTATGGTCCCCGCCATAT-TCC
ACTCACTT-TTTCACAAAAATTTGCACAACCACTACGAGGTTAAATT-CCCACGTCTATCGTG-TCCGTCTTTTCTTGTACTACTACCGGTGATCCGTATA-----ATCACGCCATGTTCCCTACCATCTTTCC
SizeHit CountTotal Norm
1065 scf7180000451535:3293-3417 - 48.42
TTGAACTTACTGTTTAATAATGTTAAATACAGATAT-ATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCA---TTTAATTATGGTCCCCGCCATATTCC
AC----TCACTTTTCACAAAAGTTTCACAATGCCATTACGAGTACAA-ATCCCCGTCC------ACCACGCTTGTCTTTTCCGATACCACTAAACTCTGATCCGTAATATCACGCCATGTGCCCTACCATCTCTC
SizeHit CountTotal Norm
1195 scf7180000453108:21809-21931 - 46.95
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTA----TGGCTGCGATTGAGCTATGATCTG-------CATTTAATTATGGTCCCCGCCATAT-TCC
---AACTCACTA--TAATGACCTCAACCACAAATA----------ATTTCTTCCACTACGTCC--GTTGCTCA--AGTTTTACTGGGCACAACTAAACGGTGATCCGTTTCTTGCACGCCGT--TGTTCCCTACCATCTTTCC
SizeHit CountTotal Norm
1135 scf7180000452497:8426-8529 - 45.86
TTGA--------ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGC---ATTTAATTATGGTCCCCGCCATATTCC
TACAGAAAATTAACTT--------------------------------------TCGGTCCCGCCACGTCAGTCACGTCGATCGCTCCGGGCACTATTCAACGGTGATCCGTTTAATCACGCCATGTTCCCTACCATCTTCC
SizeHit CountTotal Norm
1392 scf7180000453774:3535-3638 - 45.86
TTGA--------ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGC---ATTTAATTATGGTCCCCGCCATATTCC
TACAGAAAATTAACTT--------------------------------------TCGGTCCCGCCACGTCAGTCACGTCGATCGCTCCGGGCACTATTCAACGGTGATCCGTTTAATCACGCCATGTTCCCTACCATCTTCC
SizeHit CountTotal Norm
1562 scf7180000453927:1240261-1240387 - 44.94
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTC-------GTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATCGATAGAAAGTGCAAAAACGCTGACTAACTGTACCTAACTTATTTTTCTTCTATTTCGCTTAGCTGCTTATATTTTTTTC-----------GGTTTACTTTTGGTTCTATAATGACCACCCTTTTTTCCCGCCTCC
SizeHit CountTotal Norm
444 scf7180000453722:11260-11389 + 43.45
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGC-TCGTCGGTA----TGGCTGCGATTGAGCTATGATCTGCATTTAATTATG---------GTCCCCGCCATATTCC
AAAAAAAAACTTC--AA------------CGAATTTACACAAAAATACTTTTCGGTCCCGCCACGTCAGTTACGTCGATCTCTCCGGGCACTACTAACCGGTGATCCGTTTT--ATCACGCCATATTACCATCCTACCATCTTTC
SizeHit CountTotal Norm
794 scf7180000454068:73740-73844 + 43.41
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGA--GCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACAAAAT----------------------------TTTAACAGAAACACTGTTCGTTACGTCTATCTTGTCCGTTTTTCTCGGTACCACTGACGGTGATCGGCTCCATCACGCCACGTTCCTCGCCATCTTCT
SizeHit CountTotal Norm
338 scf7180000453289:5541-5655 + 43.24
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCAT---TTAATTATGGTCCCCGCCATATTCC
CTAAATTTATCACAAAAAAAACTAACTCAC------------AAAATTGTC-CGTCTACCA------CGTTTGTCTTTTCGGGTACTACTGAATGGTGATCCGTATTATCACGCCATGTTCCCTACCATCTTTC
SizeHit CountTotal Norm
18 scf7180000448733:10984-11087 + 43.0
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTG---CATTTAATTATGGTCCCCGCCATATTCC
C---------------------------ACAGAAACA--CTACGAGTTTAAATCGCCACGTCTATCTTGTCCGTTTTTTCGAGTACCACT-CGCGGTGATCGGTTCTATCACGCCACGTTCCTCGCCATCTTCC
SizeHit CountTotal Norm
650 scf7180000453932:369375-369493 + 42.17
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCAT---------ATTCC
GTTAAGCTATTATTTTTTTATTCTAAGTACAATTTATTAATTAATTCT-TTGGGGTCATGTGGTACTGA--------------------AATGTTTCGTCTCGTAATTTAATATAAGCCCTACTATTACGCATTAACTCT
SizeHit CountTotal Norm
1614 scf7180000453942:810-927 - 42.06
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTG-GCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGA------GCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTATAGCTCATTTTCAAAATTTTCAC-C---------AAACCACTTCTACGTCGAGCTTCGCCTATCACGATCGTTTTTTCGGGTACTATTGAAAGGTTCCTTTGATCTG-------TTCTTCTCCCTGCCAT---CC
SizeHit CountTotal Norm
436 scf7180000453629:7633-7748 + 41.4
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCA---TTTAATTATGGTCCCCGCCATATTCC
TTCAC--AAAAGTTTCACAATGCCA-TTACGAGTACAAA---------TCCCCGTCCAC------CACGCTTGTCTTTTCCGATACCACTAAACTCTGATCCGTAATATCACGCCATGTGCCCTACCATCTCTC
SizeHit CountTotal Norm
51 scf7180000449466:12325-12433 + 38.12
TTGAACTTACTG--TTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTG--------CATTTAATTATGGTCCCCGCCATATTCC
AAAAACTAACTCACTTCAACGAATTTACACACAATTACTTCTTTACT----CTCCGGGCACTACTAACC---------------------------GGTGATCCGTTTTATCACGCCATATTACCAT-CCTACCATCTTTC
SizeHit CountTotal Norm


droEug1 - 19 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2377 scf7180000407524:9378-9509 - 49.22
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCC-------------TTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCT-----ATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTC-------------TCAGTGATTAATGCAATCACTTTGTGAAATTTGTTTCGCGAGCTCGGTTTCACTTTGATCATCCGAATCCGCAATATGACAGCTACTGATTAGTAGTTTGGCCTACAT---ATCGTAGGCCTCGCCATTTTC-
SizeHit CountTotal Norm
1155 scf7180000409223:105589-105730 + 44.79
TTGAACTTACTGTTTAATAATGTTAAATACAG-ATATATAATTAAAGTTGCCTTGGCTAC-----GACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGC----------ATTTAATTATGGTCCCCGCCATATTCC
TTTAAGTCAAAAGTCAA--AAGTAACATACAGTACATATCCCAAAAGCCACATTATCAATCTGTTGACCTGATACCTGAAGCTTATTGACGGATCAAAGCG---ATGTGCATTTGTTTCTATATAATTATTGGCCTAATAATAGTGC
SizeHit CountTotal Norm
1639 scf7180000409676:80725-80829 + 42.84
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACAGACTTATAGACAAAAGCTCTTAATTGAAGACACTGG--AAGCGTTGATTTGACTACCGCGTCT----GCGGCAGCATTATTTTTTTCGAGATA---TATACATATATTTAT-----------------
SizeHit CountTotal Norm
3291 scf7180000409472:779971-780068 - 42.04
TTGAA-----CTTACTGTTTAATAAT-GTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTCAAAAGCAATCACAGTTTTATATTTGAAGAATACACTTT---CATCGAAGCTGA--TTCCTTCGATTTTCTAGTTAGATTATAGTGCTTCCTTTCAGATAT----------------------------------
SizeHit CountTotal Norm
3091 scf7180000409196:4496-4585 - 37.98
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TA-----------------------------------------AAAACCCTGTGACTCGGGGTTCCTAGTCTGTGTGTGTGTGGACGGTTCTGGCATCATCTGCATCTCTCTGTCGTGTCCGACACACTGC
SizeHit CountTotal Norm
1434 scf7180000409551:65312-65386 + 33.33
TTGAACTTACTGTT----TAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGTAGTTGTAGTTCCTGAGATCACAACAAGTACAGGTACAAAATTAAAGTTAATTTGTTAATGATTAATTCGCT------------------------------------------------------------
SizeHit CountTotal Norm
1228 scf7180000409369:18178-18236 + 31.01
TTGAACTTACTGTTTAATAATGTTAAATACAGATATAT-AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAGTTTACGTAACATTCTTTTTAAATACACATTTATCAATTAAAGATGCATTCGTTA-------------------------------------------------------------------------
SizeHit CountTotal Norm
440 scf7180000407987:12397-12462 + 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
-----------------------------------------------------------------CCAGATCGGCAAAATGGCAGCTACTGACTATTGGTTTGGCCTACATGACGTGGACCGCCATTTCCT
SizeHit CountTotal Norm
2159 scf7180000405811:11497-11548 - 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-GAAATTAATATATAATTATCTGAAACAAAGTTATATAATCTGAA------------------------------------------------------------------------------ATACTTT
SizeHit CountTotal Norm
3809 scf7180000409760:986717-986768 - 26.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
----------------------------------------------------------------GCAGGCTGGCAGGCAGGGTTGCTATGAAGCTATAAAACACTTGGAATTATGG---------------
SizeHit CountTotal Norm
3750 scf7180000409752:51192-51233 - 22.48
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTACCCCTACTATTTATTGCTTTTAAATACAAACATAAATTT-----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
4043 scf7180000409917:20898-20942 - 22.03
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
----AGTAATCGTTTAAGATCGTTATATATGGTTATATAATTCAAATT-----------------------------------------------------------------------------------
SizeHit CountTotal Norm
2493 scf7180000408038:9789-9822 - 18.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACAAATTTTTAAACATTCTTAAATAAAGGT-------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
1158 scf7180000409223:202835-202863 + 17.83
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCAAACTTAATATTTAATAATATTTAATA------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
1015 scf7180000409063:51033-51071 + 17.05
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTATTTAGGTTGTTTAATACGTTCATACATACATATATA--------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
3443 scf7180000409554:4982167-4982202 - 16.28
TTG--AAC---TTACTGTTTAATA-ATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTACTAACACCCCTTTGTTTAACATATTTTAAATGC-----------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
3288 scf7180000409472:418208-418241 - 14.73
TTGAACTTACTGTTTAATAATGT-TAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATGTAACAATTACTTAATAGAATCTGAATCTAGA--------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
1323 scf7180000409466:3761299-3761313 + 9.3
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAACTTACTACTT--------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
None None
2896 scf7180000409004:291957-291960 - 3.1
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TT-------------------------------------------------------------------------------------------------------------------------------CC
SizeHit CountTotal Norm
None None


droBia1 - 52 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4191 scf7180000301469:14871-15004 - 56.92
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCA------TTTAATTATGGTCCCCGCCATATTCC
TACCACTCACTTTTATTTTATTTTTGGCACAAA-ATTTAACTTAGGCTTC--TAGCTGCATCTGTCTGGTTCGGCAATATGGCTGCGACGATACCCATATCTGCTGATCATTTTTATTTCTGCCCCCGCCATATTAC
SizeHit CountTotal Norm
1397 scf7180000301566:4902-5032 + 56.07
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCT-TGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGG-----TCCCCGCCATATTCC
TTA--CTTAAT----TTTAATTTTAAGCACAAAACTTTACTTAGCACGGAGTGCAGCTGCATCTGCCTGGTTGGAAAATATGGCTGTGACTATACCAATATATGCTTATCATCTTCGCTTTTCCCCCGCCATATTAC
SizeHit CountTotal Norm
3118 scf7180000302509:24090-24225 + 55.96
TTG-AACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATT-------TAATTATGGTCCCCGCCATATTCC
CTACCACTCACTTTTATTTTATTTTTGGCACATA-ATTTAACTTAAGCTTC--TAGCTGCATCTGTCTGGTTCCGCAATATGGCTGCGACTATACCAATATCTGCTGATCATCTTCGTTTCCGCTCCCCGCCATATTAC
SizeHit CountTotal Norm
144 scf7180000297583:368-498 + 54.95
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGC-------ATTTAATTATGGTCCCCGCCATATTCC
TTCGCCTCACTATT--ATATTTTTTATTATAACTTT---ACTTAGGCTTC--TAGCTGCATCTGTGTGGATCGCCAATATGGCTGCGACTACACCCATATCTCCTGATCATCTTCGCTTCTTTCCCCCGCCATATTAC
SizeHit CountTotal Norm
584 scf7180000301155:11980-12106 + 52.3
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGG----CTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACTAACATACTATC-ACTCACATTTATTTTATTTTTGGCACAAAACTTAACTTAGGACCTTGCACCTGTCTGGTTCGGCAATATGGCTGCGACTATACCCATATCTGCTGATCATCTTCGCT-------TCTGCC
SizeHit CountTotal Norm
4616 scf7180000301604:6251-6370 - 47.92
TTGA-ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTACCACTCACTTAT--TTTATTTTTAGCACAAA-ACTTAACTTAGGCTTC--TAGCTGCATCTGTATGGTTCGGAAATATGGCTGCGACTATACCCATATCGGCTG------ATCATCTTCGC-TTCTGCC
SizeHit CountTotal Norm
169 scf7180000297854:15198-15320 + 47.33
TTGAACTTACTGTTT-AATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCA-------TTTAATTATGGTCCCCGCCATATTCC
TTTATTTTATTTTTGGCACAACGCTTAACTTAGGCTTCTAGTTGCATCTGCGTCTGCGGC----------------AATATGGCTGCGACTATCCCCATATCTGCTGATCATCTTCTCTTCTGCCCCCCACCATATTAC
SizeHit CountTotal Norm
3189 scf7180000302520:2070-2187 + 47.29
TTGAACTTACTGTTTAATAATGTTAAATA-----CAGATATAT-AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCGTTTTCCCCGGAAAACAACCTAAAACCGCTGGCAACTATTTGCATTAAAATTGATTTTGTTCGTACTTTATATAGACTCGACACATTTTCGATTAAGCCCTGATCTGTTTCTGTTT-------------------
SizeHit CountTotal Norm
4935 scf7180000302050:16083-16192 - 45.19
TTGAACTTACTGT--TTAATAATGTTAAATAC---AGATATATA--ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CCAAACTTATGAGGTTGTATGTTAAGAAACACCTAAGATATATTTTTTTCATATTATTTTACCATCAATTTTCCGACT-GTTTGTATGGCAGCTAT------ATGATTCGAACTTCA---------------------
SizeHit CountTotal Norm
2756 scf7180000302405:63085-63213 + 44.83
TTGAACTTACTGTTTA-----ATAATGTTAAATACAGATATATAATTAAAGTTGCC---------TTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTGGGTAGTATGAAGAGTATTGTAGTAGAACTCACAAGTATGTAGTCGAACTTACGAGTAAATCTTCGGGGGCCATTTG------CGTCGGTAC---CCTGATTGCCCTATAA------ATTAATAATAATAAATACCGCACTC-
SizeHit CountTotal Norm
3250 scf7180000297125:4100-4238 - 43.79
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCT--------CGTCGGTATGGCTGCGATTGAGCTATG---ATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTTATTTATTATATTTTCTGTATATATGCGTATATGCAATTAGATCTTATCTAGAT-CGTTTTCTTGGCTTAGGGCCCTTTTTGTTAGACACTTATTGTGTAATAGGTATCCGCACAAAATTATGACAATTATCATAAA--
SizeHit CountTotal Norm
4608 scf7180000301601:4775-4891 - 42.96
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCG--ATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCAAAGAAACGGTTAAAGAAATA-------------ATAATATAACTTTTTTTAAATATTGCTT--TGTTGTATTAATATCACTGCAGCAAGCAACAATCATTAAAACTTTAACATGGTGATCGAT-TATTTC
SizeHit CountTotal Norm
4607 scf7180000301600:21009-21143 - 42.47
TTGAACTTACTGTTTA-------------ATAATGTTAAATACAGATATAT--------------AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTC--GTCGGTATGGCTG-CGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGGTATATTTTTGTATTTTTATTCCCTCAATTTATTAAACAAAGGAATATACCCTGCAGTACTGAATGAGAATTTGTTTGAAAATGACTGATTAAATAACATATGTATGACCAAGGATTCAGCAGTGCTCAACA--------------------------
SizeHit CountTotal Norm
2242 scf7180000302178:25428-25511 + 40.31
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT-----CCCCGCCATATTCC
T----------------------------------------------------AGTTGCGTCTGCCTGGTTTGGCAATATGGCTGCGACTCTACCAATATCTGCTGATCATCTTCGTTTCTCCCTCGCCATATTAC
SizeHit CountTotal Norm
2947 scf7180000302425:25617-25719 + 38.4
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAA----AGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTATT---------TA---ACTTTAATCACAAA------ACTTAACTTAGCACTTCCAGTTGCATCTGCCTCGTTTGGCAATATGGCTGCGATTCAAT----ATCTGC------TAATCATCTTCGT----TTCT
SizeHit CountTotal Norm
4257 scf7180000301495:241901-242006 - 38.26
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACG--ACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCGAAATTCTTAA----AAATA-----------------TAAAAATTTATATTCGCAATATTATAAGATAATATGTCAAAAAGCCC-C---AAAGCTATAATTTGTTTCAAATTAT--TTCCCACCAATTATC
SizeHit CountTotal Norm
1838 scf7180000302072:5171-5264 + 37.54
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TACCATAAACTTTATTCTGGAGTTAAATTAAAAGACATTCTTATATTCGATTTAGCTTCG-----CTTGTGAACAGCTGTGTTTACTTTTGTGCTCTGA--------------------------------
SizeHit CountTotal Norm
5143 scf7180000302113:1268797-1268898 - 37.42
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT-TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TA---TTTA-TGTTTAAGATCATTC----------CAAAATAGGAAAACTCCTTTTTTGTAACCTTCCAATGTATTTC----------------TGAACATTTACATACAATTTTTGTCATCGATAGATTTC
SizeHit CountTotal Norm
2079 scf7180000302135:6310-6391 + 37.21
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGG-----TCCCCGCCATATTCC
------------------------------------------------------GCTGCATCTGCCTGGTTGGAAAATATCGCTGTGACTATACCAATATATGCTTATCATCTTCGATTTTCCCCCGCCATATTAC
SizeHit CountTotal Norm
3698 scf7180000300522:912-993 - 37.21
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGG-----TCCCCGCCATATTCC
------------------------------------------------------GCTGCATCTGCCTGGTTGGAAAATATCGCTGTGACTATACCAATATATGCTTATCATCTTCGCTTTTCCCCCGCCATATTAC
SizeHit CountTotal Norm
3700 scf7180000300522:4481-4562 - 37.21
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGG-----TCCCCGCCATATTCC
------------------------------------------------------GCTGCATCTGCCTGGTTGGAAAATATCGCTGTGACTATACCAATATATGCTTATCATCTTCGATTTTCCCCCGCCATATTAC
SizeHit CountTotal Norm


droTak1 - 93 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
74 scf7180000410435:1249-1378 + 58.94
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
TAACACTCACTTCTTTCTGTTTTTTTGCACAAACACTTA-TTTAAGTAACTCCCGCTGCGTCCAGCTTCTGGGTCAATATGGCTGCGACTATTC--TAATCTGCCTATCATCATGACGATATCGCCATATTCC
SizeHit CountTotal Norm
6702 scf7180000410823:20826-20951 - 58.3
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
----ACTCACTTCTTTCTGTTTTTTTGCACAAACACTTA-TTTAAGTAACTCCCGCTGCGTCCAGCTTCTGGGACAATATGGCTGCGACTATTCT--AATCTGCCTATCATCATGACGATATCGCCATATTCC
SizeHit CountTotal Norm
10492 scf7180000415362:3676-3807 - 58.05
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTC--CCCGCCATATTCC
TAGCACTCACTTCTTTCTGTTTTTTTGCACAAACACTTA-TTTAAGTAACTCCCGCTGCGTGTGCCTCATTTGACAATATGGCTGCGACTACCTCAATATCTGCCTATCATCATTCTCATCCCGCCATATTCC
SizeHit CountTotal Norm
1367 scf7180000413256:4694-4823 + 57.45
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCC--CCGCCATATTCC
TAACACTCACTTTTCTCTGTTTTTTCGCACAAACACTT-GTTCAAGTAACTCCCGCTGCGTCTAGCTTCTGGGGCAATATGGCTGCGACTAT--TCTAATCTGCCTATCATCATGGCGGTATTGCCATATTCC
SizeHit CountTotal Norm
9376 scf7180000414758:2683-2812 - 57.45
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCC--CCGCCATATTCC
TAACACTCACTTTTCTCTGTTTTTTCGCACAAACACTT-GTTCAAGTAACTCCCGCTGCGTCTAGCTTCTCGGGCAATATGGCTGCGACTAT--TCTAATCTGCCTATCATCATGGCGGTATTGCCATATTCC
SizeHit CountTotal Norm
6703 scf7180000410823:21351-21480 - 57.45
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGG--TCCCCGCCATATTCC
TAACACTCACTTGTTTCTGTTTTTTTGCACAAGC-TCTTATTTAAGTAACTCCCACTGCGTCCAGCTTCTGGGACAATATGGCTGCGACTATTC--TAATCTGCCTATCATTATGAAGATATCGCCATATTCC
SizeHit CountTotal Norm
7095 scf7180000412276:5333-5462 - 57.45
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTC--CCCGCCATATTCC
CTAAACTCTCACTTTTTCTGGTTTTGGCACACAC--TTAATGACGGAACTAATCGCTGCGTCCAGCTTTCA-GACAATATGGCTGCGACTGCATTAATATCTGCCTATCATCATTCTCATCCCGTCATATTCC
SizeHit CountTotal Norm
8709 scf7180000414321:12560-12691 - 57.31
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTC--CCCGCCATATTCC
TAACACTCACTTTATATCAATTTTTGACACAAACACTTATCTTAAA-ACCAATCGCTGCGTACAGCTTCTATGACAAAATGGCTGGGACTATCCCAATATCTGCCTATCATTATTCTCATCCCGCCATATTCC
SizeHit CountTotal Norm
1160 scf7180000412950:40485-40615 + 57.01
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTC--CCCGCCATATTCC
TAACACTCACTTCTTTCT-GTATTTTGCACAAACACTTA-TTTGAGTAACTCCCGCTGCGTGTGCCTCATTTGACAATATGGCTGCGACTACCTCAATATCTGCCTATCATCATTCTCATCCCGCCATATTCC
SizeHit CountTotal Norm
2481 scf7180000414438:13320-13449 + 56.7
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCC--CCGCCATATTCC
TAACACTCACTTTTTTCTGTTTTTTTGCACAAACACTTG-TTCAAATAACTCCCGCTGCGTCCAGCTTCTGGGACAATATGGCTGCGACTATTC--TAATCTGCCTATCATCATGGCGGTATTGCCATATTCC
SizeHit CountTotal Norm
9795 scf7180000415155:38094-38223 - 56.7
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTC--CCCGCCATATTCC
TAACACTCACTTCTTATTAATTTTTGGCACAAACACTTATCT-TAGAACCAATCGCTGCGTCCAGCTTCTGGGACAATATGGCTGCGACCATCCT--AATCTGCCTATCATCATGGCGATATTGCCATATTCC
SizeHit CountTotal Norm
6706 scf7180000410823:28622-28751 - 56.7
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
TAACACTCACTTCTTTCTGTTTTTTTGCAAAAACACTTA-TTTAAGTAACTCCCGCTGCGTCCAGCTTCTGGGACAATATGGCTGCGACTA--TTGTAATCTGCCTATCATCATGGCGATATCGCCATATTCC
SizeHit CountTotal Norm
9069 scf7180000414548:3988-4117 - 56.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
CTAAACTCTCACTTTTTTCTGGT-TTTGGCACACACTTAATGAAGGAACTTATCGCTGCGTCCAGCTTTCATGACAATATGGCTGCGACTATCT--TAATCTGCCTATCATCATGGCGGTATTGCCATATTCC
SizeHit CountTotal Norm
12382 scf7180000415877:65981-66110 - 56.6
TTGAA--CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
CTAAAATCTCACTTTTTTCTGGTTTTG---GCACACACTTAATGAAGGAACTTATCGCTGCGTCCAGCTTTCCTGACAATATGGCTGCGACTCTCT--TAATCTGCCTATCATCATGGCGGTATTGCCATATTCC
SizeHit CountTotal Norm
12383 scf7180000415877:68693-68822 - 56.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
CTAAACTCTCACTTTTTTCTGGT-TTTGGCACACACTTAATGAAGGAACTTATCGCTGCGTCCAGCTTTCATGACAATATGGCTGCGACTATCT--TAATCTGCCTATCATCATGGCGGTATTGCCATATTCC
SizeHit CountTotal Norm
1019 scf7180000412763:20168-20298 + 55.53
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTC--CCCGCCATATTCC
TAACACTCACTTCCTTC-TGTATTTTGCACAAACACTTA-TTTGAGTAACTCCCGCTGCGTGTGCCTCATTTGACAATATGGCTGCGACTACCTCAATATCTGCCTATCATCATTCTCATCCCGCCGTATTCC
SizeHit CountTotal Norm
6084 scf7180000415892:3932-4062 + 55.53
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
CTAAACTCTCTCTTTTTCTGGTTTTGGCACAAACACATAATTGAGGAACTAATCGCTGTGGCCAGCTTATATAGCAATATGGCTGCGACTATCCT--AATCTGCCTATCATCATGGTGATATTGCCATATTCC
SizeHit CountTotal Norm
6943 scf7180000411231:5121-5251 - 54.79
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATG---GTCCCCGCCATATTCC
TAACACTCACTTCTTT-CCGTATTTTGCACAAACACTTA-TTTAGGTAACTCCCGCTGCGTGTGCCTCATTTGACAATATGGCTGCGACTACCTCAATATCTGCCTATCATCATTCTAA-TCCCGCTATATTCC
SizeHit CountTotal Norm
9567 scf7180000415053:27022-27146 - 53.19
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
TAACACTCACTTCTTATTGATTCTTGGCACAAACACTTATTTCAG--------GACTACGTCCAGCTCCTGAGACAATATGGCTGCGACTATCTTACTATTTGCCAATAATTATGATGATATTGCCATATTTC
SizeHit CountTotal Norm
2651 scf7180000414536:74972-75096 + 52.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGT--CCCCGCCATATTCC
TAGCACTCACTTCTTATTGATTCTTGGCACAAACACTTATTTCAGG--------ACTACGTCCAGCTTTTGAGACAATATGGCTGCGACTATCTTACTATTTGCCAATCATCATGATGATATGGCCATATTTC
SizeHit CountTotal Norm
9042 scf7180000414535:30412-30531 - 51.98
TTGAA---CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATT--ATGGTCCCCGCCATATTCC
TCTAAACTCTCACTTTTTTCTGATTTTGG-CACAAAAAC----------TA---ATCGCTGCGTCCAGCATCTATGACAATATGGCTGCGACTATCCC--AATCTGCCTATCATAATATCTATCCCGCCATATTCC
SizeHit CountTotal Norm


droEle1 - 55 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4335 scf7180000490995:30198-30325 - 50.7
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCT--TGG----CTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTCAAATGGCTTTGTACGTTTTTT-------TGTAATTTATTAAAATCGCCCACTGACGAGGTTTGATTTTCTCCCTAGGCTCTATTACTGTGTTTATGCTATGAATTTCATG-AATTATTGAATACATGA-AATCA
SizeHit CountTotal Norm
4386 scf7180000491003:3155-3295 - 50.25
TTGAACTTACTGTTTAATAATGT---------------TAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATAAGTTTATTGCAAATAAATAATTTATCTAAAAACTAATAATGCACTTATGA-ACTTATTTTTCCACGACTGTTCTCCTTCGACTTATTGCAGCAACTAAAGCAAAACCCTGACCTACACCA----AAGTCGTTCGCCATTTTCC
SizeHit CountTotal Norm
2705 scf7180000491309:6154-6280 + 48.16
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGT-----ATGGCTGCGATTGAGCTATGATCTGCATTTA-ATTATGGTC-CCCGCCATATTC-C
TTTAACTTATC------------TAAGCACTAATAATGAATTAAAGAACTCATATTTTTTACTCGACCGTTCGTCTACGACTTTTTGCAGCAACTAACGTAAAACCCAGACCTACACCAAAGTCGTTCGCCATTTTCAC
SizeHit CountTotal Norm
4083 scf7180000490719:21841-21972 - 47.11
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGT-------------------TGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTGAGTTAT---TCA--AACACTAATCACGAACTT------TAAATTTTTGGGTTTTTTTTTCTGTACCGTTTCTCCTACTTACT-TCTTGTCAGC--AACTAAAGCAAAACCCTGACCTACACCAAA----GTCGCTCGCCATTTTCC
SizeHit CountTotal Norm
5089 scf7180000491214:4439970-4440092 - 46.57
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCT---------TGGCTACGACTTGCTGGCTCGTCGGTA--------TGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTAAATCCATCAATTATTTTCTTTTAAAATAATTCTTTAATAAAATTTGACACTTTTTTCGTGGTTTA------------CATTGGTACTGCCCCTTAAAGGTGAGTCAACTAAAATATGACTTTTATTATGGCC-------------
SizeHit CountTotal Norm
215 scf7180000487616:9457-9596 + 46.07
TTGAACTTACTGTTTAA------------TAATGTTAAATACAGATATATAATTAAAGTTGC--CTTGGCTAC-GACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATAAAT-AACCACTCACTTTGAGTTATTCAAACACTAATCACGAACTTAAATTTTGGGTTTTTTTCCGACCGTTCTCCTACTA-CTTCTTGCAGCAACTAAAGCAAAACCCTGACCTACACCAAA----GTCGCTCGCCATTTTCC
SizeHit CountTotal Norm
167 scf7180000487213:9428-9550 + 44.4
TTGAACTTACTGTTTAATAATGTTAA--ATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAATTTATCT---A--AACACCAATAATGCACATATGA-ACTTATTTTTCCACGACTGTTCTCCTACGACTTATTGCAGCAACTAAAGCAAAACCCTGACCTACACCAA----AGTCGTTCGCCATTTTCC
SizeHit CountTotal Norm
750 scf7180000490260:6314-6431 + 44.19
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTG--CTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GCAAATTAAATCCCATACGTCGTTAAATTCCGCAACCCAATTAAGACATTCCAGATTAGAATTTACAGTGAGTATTTGGCTATGTTTTTATAAATTAATGATTACAATTTATTTATGG---------------
SizeHit CountTotal Norm
4072 scf7180000490712:58228-58341 - 44.19
TTGAACTTACTGTT------TAATAATGTTAAATACAGATATATA--------------ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGGGAAA---GTTTCATGCAGATGATGCTGATCAAGAATATATATACTTTAAAGGGTAGAAGATGTCTCCTTCACTGCG--TTGCAAACT------TCTGACTGAAATTATAATACCGTCTGCA--------------------------
SizeHit CountTotal Norm
751 scf7180000490260:6955-7070 + 43.93
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAG-TTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTT-AATTATGGTCC-CCGCCATATTCC
TCTAAGCAACA-TTGATTGATTTTCAGAACTCCTTTTTTTCTC-CGACC-GTTTGTCTACGACTT--------------TTTGCAGCAACTGAAGTAAAACCCTGAACTACACCAAAGTCCTTCGCCATTTT-C
SizeHit CountTotal Norm
255 scf7180000488030:824-952 + 43.61
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTG--GCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTCACTTTGAGTTATTCAAACACTAATCACGAACTTAAATTTTGGGTTTTTTTCCGACCGTTCTCCTACTACTTCTTGCAGCAACTAAAGCAAAACCCTGACCTACACCAAA----GTCGCTCGCCATTTTCC
SizeHit CountTotal Norm
4525 scf7180000491024:431631-431772 - 43.53
TTGAACTTACTGTT--------------------------TAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATG---ATCTGCAT-TTAATTATGGTCCCCGCCATATTCC
TTTGAAAAACTTTCGGCCAGCCGAAGTTCATATACCCTTGCAGCTATTGCAAAATTAGA--TATTTTTGAAGTCATTAAAATTATGATTTACTTGCGTGTATATTTAAAGGCATTTGAGCTATGATGATTTGCAGCTTAATTAT-----------------
SizeHit CountTotal Norm
3572 scf7180000490293:32709-32821 - 40.83
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATA-ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTAAAC---------------ACTAATTATGAATTTATGAACTTATTTTTTCCCGACTGTTCTCCTACAACTTAGTGCAGCAACTAAATCAAAACCCTGACCTACACCAAA----GTCGTTCGCCATTTTCC
SizeHit CountTotal Norm
1816 scf7180000491046:4336403-4336524 + 39.71
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAAGTAACTATTCAA----AATAAGCCCGAATGAATGACTACTTTTTTTCCGACCGTTCGTCTACGACTTTTTGCAGCTACTGAAGTAAAACCCTGACCTACACC-----AAAGTCCTTCACGACTCTT
SizeHit CountTotal Norm
3792 scf7180000490492:13621-13761 - 39.48
TTGAACTTACTGTTTAA------------TAATGTTAAATACAGATATATAATTAAAGTTG--CCTTGGC--------TACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATAAATAACTTCTCACATTGAGTTATCTAAACACTAATTACGAATTTTTGTCTTAATTTTTTTCCCGACAGTTCTCCTACGACT--------TCTTGCAGCAACTAAAGCAAAACCCTGACCTACACCAA----AGTCGCTCGCCATTTTCC
SizeHit CountTotal Norm
4285 scf7180000490974:20575-20678 - 36.92
TTGAACTTACTGTTTAATAATGTT-AAATA------------------CAGATATATA---------------ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TACAACAGGATTTTGTGTAATGATTTCATGCAGCCTTAGCAATGCTCCCAGAAATATTTTTTTTCGTGTCTGCGTAGAAGTCGCCTTGTCTA---ACTGCTGGCTTG----------------------------------------------------------
SizeHit CountTotal Norm
2897 scf7180000486948:23193-23305 - 36.45
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TA----------TCTAAACACCAATAATGCACATATGAA-CTTAATTTTCCACGACTGTTCTCCTACGACTTATTGCAGCAACTAAAGCAAAACCCTGACCTACACCAAA-----GT---CGTCATTTTCC
SizeHit CountTotal Norm
1584 scf7180000491000:963211-963377 + 35.65
TTGAACTTACTGTTT-AA-TAATGTTAAATACAGAT-ATATAATTA--AAGTTGCCTTGGCTACGACTTGCTGGCT--CGTCGGTATGGCTGCGATTGAGC-----------------------------TATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAGTTTAGTTGTTTTAATGAATATTACATATATTTTTTATAGCTGAAAGGGTAAATAAACTTCAGCTTGCTTCCTTTCTTCTCTATAACCGTAGCTTATATACCCAATTGATCTTATCTTACAGCTCTCGTCCAGCTGCCTGAAGGTGCCGTCCACGCCGGATGCC
SizeHit CountTotal Norm
4976 scf7180000491193:4680213-4680321 - 35.15
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-------ACTGAAGCGTAATTTTCCTTCTAGACAATATCTTAAAGTTTATTAATTTTCGGTTTGCATATTCA----------------CTATCTTTCTTCTAGCGCAATTTATAGCCTGGGCGAGTTTCC
SizeHit CountTotal Norm
4691 scf7180000491104:172024-172099 - 33.67
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAACCCTTTGTTAAATAATACAAAATTTAAACAATGATTACACATTTTTTACGTTTTGATTTGATAACCTATCG-------------------------------------------------------
SizeHit CountTotal Norm
2297 scf7180000491217:452686-452757 + 32.0
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGATCTTTCTACTCACTGCCAAAAACAACAGACGTGCCATAAATATTGCCTTTGCCT---ATTGCTGGCCCACC--------------------------------------------------------
SizeHit CountTotal Norm


droRho1 - 152 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
13464 scf7180000780189:8752-8880 - 60.15
TTGA--ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTACCACTCACTTTTTTTTGATTT-CGGCACAAACAGTAATTTAAAAACTCC--CGCTCCGTCTAGCTTCCTGGACAATATGGCTGCGACCATCCCATTATCTGCCTATCATTGCCATA-TCGCCATATTCC
SizeHit CountTotal Norm
6620 scf7180000780115:877-1004 + 57.57
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAACACTCACTTTTTTTTTGATTTCGGTACAAACACTAATTTAATAACTCC--CGCTCCGTCTAGCTTTCTGGACAATATGGCTGCGACTATCCCAATATCTGCCTATCATTGCTATA-TCGCTATATTCC
SizeHit CountTotal Norm
6624 scf7180000780115:5693-5820 + 57.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAACACTCACTTTTTTTTTGATTTCGGCACAAACACTAATTTAATAACTCC--CGCTCCGTCTAGCTTGCTGGACATTATGGTTGCGACTATCCCAATATCTGCCTATCAATGCTAAA-TCGCCATATTCC
SizeHit CountTotal Norm
2564 scf7180000773127:13752-13879 + 56.81
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAACACTCACTTTATTTTTGATTTCGGCACAAACACTTATTAAATAACTCC--CGCTCCTTCTAGCTTTCTGGACAATATGGCTGCGACTGTCCCAATATCTGCCTATCATTGCTATA-TCGCCATATTCC
SizeHit CountTotal Norm
1233 scf7180000766215:588-714 + 56.57
TTGA--ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTATTATATTTCGGCACAAACACTATTTTAACATT---TTTGTTCTGT-CTGCTGG---GACAATATGGCTGCGACTATATAAAAATTTGCCTATCATGCCTATATCCCGCCATATTCC
SizeHit CountTotal Norm
9551 scf7180000773660:12037-12164 - 56.38
TTGA-ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTAACACTCACTTTATTTTTGATTTCGGCACAAACACTAATTTAATAACT--CCCGCTCCGTCTAGCT-TCTGGACAATATGGCTGCGACTATCCCAATATCTGCCTATCATTACTATA-TCGCCATATCTC
SizeHit CountTotal Norm
8232 scf7180000767271:15995-16123 - 56.3
TTGA--ACTTACTGTTTAATAATGTTA-AATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTTTTTATATTTCGGCACAAACAC-TACTT--AACTACTTTCTGTTCCATCTACTGG---GACAATATGGCTGCGACTATATAAAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
427 scf7180000761753:355-480 + 56.13
TTGA--ACTTACTGTTTAATAATGTTA-AATACAGATATATAATTAAAGTTGCCTTGGC-TACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCTAACACTCACTGTTTTTTTATATTTCGGCACAAACACTACTTCAACATTTT----TCTTCCGT-CTGCTGG---GATAATATGGCTGCGACTATATCAAAACCTGCCTATCATTCCTATC-TCGCCATATTCC
SizeHit CountTotal Norm
10377 scf7180000776649:5396-5523 - 56.05
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CAACACTCACTTTATTTTTGATTTCGGCACAAACTTTTATTAAATAACTCC--CGCTCCGTCTAGCTTTCTGGACAATATGGCTGCGACTATCCCAATATCTGCCTATCATTGCTATA-TCGCCATATTCC
SizeHit CountTotal Norm
7112 scf7180000760986:6282-6408 - 55.84
TTGAA--CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTATTATATTTTGGCACAAACACTATTTTAACATT---TTTGTTCTGT-CTGCTGG---GACAATATGGCTGCGACTATATAAAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
13609 scf7180000780512:50-176 - 55.84
TTGA--ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTATTATATTTCGGCACAAACACTATTTTAACATT---TTTGTTCTGT-CTGCTGG---GACAATATGGCTGCGACTATATAAAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
12942 scf7180000779879:3096-3223 - 55.54
TTGA--ACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTTTTATATTTCGGCACAAACAC-TACTTA--ACTACTTTCTGTTCCATCTACTGG---GACAATATGGCTGCGACTATATAAAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
6054 scf7180000779805:1145-1268 + 55.03
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GCTAACTTTTTTTTTTATTTTGGCACAAACACT------AATTAAATCATTCCCGCTCCGTCTAGTTCACTGGACAATATGGCTACGACTTTATCAAAATCTGCCTATCATTCCT-TTATCGCCATATTCC
SizeHit CountTotal Norm
7550 scf7180000763168:5282-5399 - 54.74
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
A----CTTTATTTTTGATTTCGGCACAAACACTTATTAAATA--AGT----CCCGCTCCGTCTAACTTTCTGGACAATATGGCTGCGACTATCCCAATTTCTGCCTATCATTGCTGT---TGCCATATTCC
SizeHit CountTotal Norm
13486 scf7180000780204:8605-8726 - 54.15
TTGAACTTACTGTTTAATAATGTTAA-ATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAACACTCAATTTTTTTTTATATTTCGGAACAAACA-CTACTTCAACTT--TTTTGTTCCGTC-TGCTGG---GACAATATGACTGCGACTATATCA--TTCTGCCTATCATTCCTATC-TCGCCATATTCC
SizeHit CountTotal Norm
44 scf7180000758318:414-541 + 54.06
TT--GAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAGCACTCACTTTTTA-TATATTTCGGCACAAACACTATTTTAACATTTTTATG--TTCTGTCTGCTGG---GACAATATGGCTGCGACTATATAGAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
429 scf7180000761774:859-986 + 54.06
TTGAA--CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTA-TATATTTCGGCACAAACACTATTTTAACATTTTTATG--TTCTGTCTGCTGG---GACAATATGGCTGCGACTATATAGAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
2540 scf7180000773040:168-295 + 54.06
TTGAA--CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTA-TATATTTCGGCACAAACACTATTTTAACATTTTTATG--TTCTGTCTGCTGG---GACAATATGGCTGCGACTATATAGAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
2588 scf7180000773264:146-273 + 54.06
TTGAA--CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTA-TATATTTCGGCACAAACACTATTTTAACATTTTTATG--TTCTGTCTGCTGG---GACAATATGGCTGCGACTATATAGAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
2538 scf7180000773026:1127-1254 + 54.06
TTGAA--CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTA-TATATTTCGGCACAAACACTATTTTAACATTTTTATG--TTCTGTCTGCTGG---GACAATATGGCTGCGACTATATAGAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm
5895 scf7180000779616:72428-72555 + 54.06
TTGAA--CTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAAT-TATGGTCCCCGCCATATTCC
TCTAACACTCACTTTTTA-TATATTTCGGCACAAACACTATTTTAACATTTTTATG--TTCTGTCTGCTGG---GACAATATGGCTGCGACTATATAGAAATTTGCCTATCATGCCTATATCTCGCCATATTCC
SizeHit CountTotal Norm


droKik1 - 52 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2608 scf7180000302639:2558577-2558706 + 54.8
TTGAACTTACTGTTTAATAATGTTAAATACAGA-TATATAATTAAAG--TTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCCAGCTTA---TGTAATTAGCTCGACTCCAGACTATATAATCACGCTTTTGCCTTAGATTCAATTAGCTAGTGAGGCGTTAAGCTTGTTCAGGTTCCAATTGCTGCATTTACTTTCGG-CATCGCATTACCGT
SizeHit CountTotal Norm
639 scf7180000301725:259302-259414 + 48.33
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTAT-GGTCCCCGCCATATTCC
ATAA-----------------TATAAATAAAGAAATATAAATAAAGTTACCTTAAGAACTACTTTTTGCCAAGAAAAAATTCTTAAAAAATAAATACAACTTATA--AAATAACAAATCCCAAAAGTAAACC
SizeHit CountTotal Norm
1821 scf7180000302466:323252-323374 + 47.31
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTG----CTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTATTCTGCTGTTTAATTATATAATAAAAATATATATA------------CTGCCTGCCTCTTGGCAGCTGAGCTGGCAACACACCTGCAACTTGCCTGCAAAATCGTTGCACTTTTGGCCCTCGACACGGTTC
SizeHit CountTotal Norm
102 scf7180000298335:16162-16276 + 45.2
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCA--TTTAATTATGGTCCCCGCCATATTCC
TAA------TTGTTTATTTATCTCAAAT---GAGATATTTTGAACGTCAAA--------TTCTAGCTCACTCAGCGCTGACTCCAAGTTTAAGCTACATGCTCCTACTTCATTTTTGCGGTCGGCAAAATT--
SizeHit CountTotal Norm
902 scf7180000302234:165486-165585 + 41.85
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TACGACTTTCTGCTGGGGAATTTTAAATATAGAAAAGATATT---------TGCTGAAGGACTT--TGGCACTGGGGAATCTTAGCGA--GAATTAGGAGCAATGTTTAAGTA------------------
SizeHit CountTotal Norm
3332 scf7180000299114:1497-1595 - 40.63
TTGAACTTACTGTTTAATAATGTTA-------------AATACAGATATAT---AATTAAAGT----TGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATATAATCACAGGTTAATAATATTATGTTTCACTTGCAAATACAATTAAATTTTAAACAAAGAATTTTGTT---TTTCTAACCTTTTGCTTCTTCTGTATGG-------------------------------------------------
SizeHit CountTotal Norm
5495 scf7180000302610:242812-242905 - 38.71
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGC----------------------------CTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGCAATTATTATTTAA----------------------ATTAAAGCTGAAAAAATCAACATTTACTCCATTAAAAGGCTTGAATTTTTTTTCCTGCTTTTTTAGCAAGGCCTTGA-------------------------------------------
SizeHit CountTotal Norm
1873 scf7180000302469:873767-873857 + 37.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAATATTAATATTTAATAAATAAAACTTGATTTATATCCCACAAATGACCC----TCAGATTCGGCAGGTTCTGGGTATTTCGACAATGACGCT------------------------------------
SizeHit CountTotal Norm
1363 scf7180000302383:140024-140113 + 36.43
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACG--------ACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTGGATCCCCAGTTATACATGTAGTATATATATATATATATAGTATAGTTATAGCTTCGGTGCAACCACCTGTTGGCATGTGGATGTGG-------------------------------------------------
SizeHit CountTotal Norm
5607 scf7180000302634:394921-395001 - 36.43
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTGAACATTCCCTTTAAAAATAATAAATACTTGTTTATAGTTTTTTTTTCAGTTTATTTTCCTTGCTGGTTTTTTGTTGCG--------------------------------------------------
SizeHit CountTotal Norm
2306 scf7180000302544:1225027-1225098 + 32.56
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-------ATTTTTTAATATTATTAGTTATAAATATTTTTTGAAAATTGAGTAAGCCTTTGTTTGCTTTTTTTTCAATA----------------------------------------------------
SizeHit CountTotal Norm
4866 scf7180000302449:40417-40490 - 31.78
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CGA---------------------------------------------------------CTGCACGGACTCACCTGTATGGCTGATGGTGAAAATTGGGGTGCATGGCATAACGCCCAGTGTCATAGCGC
SizeHit CountTotal Norm
5698 scf7180000302656:120870-121043 - 30.33
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATA----AT----------------------------------------------------------TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGAAACTGGCTGTA-----------------AATATATAAATTATTAGAATTAAATAATTCATAAAAAATATAAGAAAAAAATATCTCTGAGGGCTGATGTTATAAGCATCCCTCGAATGCAAATTTTGGAGTCATTTTTATAGTTATATTTTA--TATTATATTTATATATTTATATTTATTCGATTATATG
SizeHit CountTotal Norm
2070 scf7180000302473:1185242-1185310 + 28.08
TTGAACTTACTGTTTAATAATG-------TTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAATTTTATTGCCAAATAATTTAGCTAGTTATTTGTATCTATAAAAACA------------------TATACTGCCTCGTTGGAAT---------------------------------------------------
SizeHit CountTotal Norm
4921 scf7180000302468:416141-416206 - 27.92
TTGAACTTACTGTTTAA-TAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
A-------ACCGCCCAAAAATTGTTGAATTCAGTCCCAAAATTGTAGTAA--TTGACTGGCATTTGCTGGCTTG----------------------------------------------------------
SizeHit CountTotal Norm
3358 scf7180000299191:64284-64338 - 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATAT--ATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTATTTTTGAAGTTAAATAATAATAAATACTGATAAACATAAATAAATTTATGTT------------------------------------------------------------------------------
SizeHit CountTotal Norm
2181 scf7180000302485:14921-14975 + 26.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATA------TAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCAAATTCTATGCTTAATAATGTTTTATACATACCTACCATACTAATTCAAATCG----------------------------------------------------------------------------------
SizeHit CountTotal Norm
1857 scf7180000302469:11523-11576 + 26.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAACAATTTTTTTTTTTAATTAAAATACAACTTTTCAGTTAAAGTTTCCTAG-----------------------------------------------------------------------------
SizeHit CountTotal Norm
3924 scf7180000301880:472-518 - 26.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T--------------AATAATAATAAATAGATATATATATATATAATTTTCTTGTCCGCGA----------------------------------------------------------------------
SizeHit CountTotal Norm
4842 scf7180000302441:1230291-1230340 - 26.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAAATTAAAATTTAATAAAATTAAAAAAAAATACAAAATTCAAAATAC---------------------------------------------------------------------------------
SizeHit CountTotal Norm
6043 scf7180000302698:786162-786209 - 26.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TA-----------------------GATATACATATATAATAATAATAGTCTTGGCTTGAACTTACCCGCT------------------------------------------------------------
SizeHit CountTotal Norm


droAna3 - 36 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2775 scaffold_13337:22759501-22759624 + 48.44
TTGAACTTACTG---------TTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTT-GCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAACTTATTTGCTCCGTTTATTTCCCGCAGATTCACCTACGCATGACATTAAAGATGGTCTTTTTACGTCAACACTAGA--ATTGGATTGGTTATTATCACGTGAAGATCTGGCTCAAGATATAG---------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
........................................................................ACACTAGA--ATTGGATTGGTTATTAT..........................................2511.001.000.000.000.00
1211 scaffold_13047:1625836-1625948 + 48.11
TTGAACTTACTGTTTAA----TAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAGTATATTTTGTATATATTTATACTAAATATATATATGAGAGTGGGTGTG---TGTATATGTATTTCTG-TTCGTATATATCA---TTTTTTATTTTTTATTTTCATTTAAA--TGGTC-------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..................................ATATATGAGAGTGAATGTG---...............................................................................1911.001.000.000.000.00
............................................................................................GCTATTTTTTATTTTCAT.........................1811.000.000.000.001.00
...........................................................ATATGxAATTCTG-TTCGTA........................................................1811.000.000.001.000.00
................................................GTGTG---TGTGTATATATTT..................................................................1811.000.001.000.000.00
.......................................TGAGAGTGTGTGTG---AGT............................................................................1720.500.000.000.500.00
4192 scaffold_12943:3217362-3217470 - 45.61
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CGTTAAGTAATTTCTAGTAATTTTAAATATATACATATATTTATAGTTCACCATT----GAAATTTTAGCTCTTAAAAATATCTTCCATTTAAGGATAAATAGTATGAGATCA------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
5709 scaffold_13269:49959-50069 - 44.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGC--GATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATAACCGAGTGGTTTAGATAATTTTGT---AATATATATT----TCGGCGCACACTAAGAAATGTGTGGAAGTTGGTATGAGTGTATGGGTATGCTGTCATCCTTATAGGAATATTG---------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..............................................................ATTTGTGGAAGGTGGTAT.....................................................1811.000.001.000.000.00
.........................................................................TTGGTATGAGTGTATGGGTAAGC.....................................2311.000.000.000.001.00
........................................................................GTTGGTATGAGTGTATGGGTATG......................................2311.000.000.000.001.00
..............................................................................ATGAGTGTATGGGTATGCTGTCATCC.............................2611.001.000.000.000.00
........................................................................GTTGGTATGAGTGTGTGGGTATGCTT...................................2611.000.000.000.001.00
........................................................................GTTGGTATTAGTGTATGGGT.........................................2011.000.000.000.001.00
..............TTAGATCATTTTGT---AAGAT.................................................................................................1911.001.000.000.000.00
........................................................................GTTGGTATGAGTGTATGGGTATGC.....................................2411.000.001.000.000.00
............................................................................GTATGAGTGTATGGGTATGCTGTC.................................2411.000.000.000.001.00
........................................................................GCTGGTATGATTGTATGGGTATGC.....................................2411.000.000.000.001.00
.........................................................................CTGGTATGAGxGTATGGGT.........................................1811.000.001.000.000.00
...............................................................................TGAGTGTATGGGTATGCTGTCATCC.............................2511.000.000.000.001.00
950 scaffold_12984:192123-192234 + 39.17
TTGAACTTACTGTTTAATAATGTTAAATACAGATAT---ATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGG-------------TCCCCGCCAT------ATTCC
TTGCA-TTACTTTTAGTTC--ATTAAATGCCATCCTAATATCGTTTGATTTA-AT---------------------------AGACTGCAGTTGAAT--------GAATTTATCTAAGGTGTGTGAGTTCAGT--CAGCCGTGTCAGGGCTCC
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..................C--ATTAAATACCATCCTACT..................................................................................................................1911.000.000.000.001.00
1954 scaffold_13230:3425077-3425232 + 37.73
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC---------------------------------------
---AACCCCTTGAAGAATTAAGGTAAATTTAGTCAGACTTTTATGCGTTCTTTGACTACGACTCCGGGACCTACCGTTACGCCCGCGAGTTTA----------AATTCAA-CGTAGTGGCCGCAACACGCTCTACGGACGAACATTTGGTTACCCCGACGCGATCCTTTT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..................................................................................................................................................TGGTGACCCCGACGTGAT......1812.000.002.000.000.00
........................................................................................................................................GACGAACATTTGGTGACCCCGACGTG........2612.000.002.000.000.00
.....................................................GACTACAACTCCGGGACCTACCGTT............................................................................................2521.000.001.000.000.00
.........................................................................................................................GCATAACGCTCTACGGACG..............................1911.000.001.000.000.00
..................................................TTTGACTACGACTCCGGGACCTACCGT.............................................................................................2720.500.000.000.000.50
......................................................ACTACGACTCCGGGACCTACCGTT............................................................................................2420.500.000.500.000.00
........................................................TACGACTCTGGGACCTACCAT.............................................................................................2111.000.001.000.000.00
...................................................TTGACTACGACTCCGGGACCT..................................................................................................2120.500.500.000.000.00
........................................................................................................................CGCATAACGCTCTACGGACGAACAT.........................2511.001.000.000.000.00
.......................................................................................................AATTCCA-CGTTGTGGCCG................................................1811.000.001.000.000.00
..................................................................................................................................TCTACGGACGAACATTTGGTGTC.................2311.000.000.000.001.00
.................................................................................................................................CTCTACGGACGAACATTTGGTGA..................2311.000.001.000.000.00
................................................................................................................................................TTTGGTGACCCCGACGTGAT......2011.000.001.000.000.00
................................................................................................................................GCTCTACGGACGAACAGATGG.....................2111.000.001.000.000.00
..........................................................................................................................CATTACGCTCTACGGACGAACATTTGGT....................2811.000.000.000.001.00
..........................................................................................................................CATAACGCTCTACGGACGAACATT........................2411.000.000.000.001.00
...........................................TACGATCTTTGACTACGACTCCGG.......................................................................................................2411.000.000.000.001.00
............................................................ACTCCGGGACCTACCGTTGCTCCC......................................................................................2411.000.001.000.000.00
.....................................................................CCTACCGTTACTCCCGCGAGTTCA----------A..................................................................2511.000.000.000.001.00
......................................................................................................................GCCGCATAACGCTCTACGGACG..............................2211.000.001.000.000.00
.................................................................................................................................................TTGGTGACCCCGACGTGAT......1911.000.001.000.000.00
.......................................................CTACGACTTCGGGACCTACC...............................................................................................2020.500.000.000.000.50
2094 scaffold_13250:1315738-1315822 + 37.21
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
C-----TTACCGTCTGTAACCGAGGAGAACCAACCCAGGCTTCAAGTATCTTTGACTACGACTTCGGGACCTACCGTTATGTCCGCGAGT-----------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.....................................................GACTACAACTCCGGGACCTACCGTT.....................................................2521.000.001.000.000.00
...................................................TTGACTACGACTCCGGGACCT...........................................................2120.500.500.000.000.00
.......................................................CTACGACTTCGGGACCTACC........................................................2020.500.000.000.000.50
..................................................TTTGACTACGACTCCGGGACCTACCGT......................................................2720.500.000.000.000.50
......................................................ACTACGACTCCGGGACCTACCGTT.....................................................2420.500.000.500.000.00
5542 scaffold_13260:792298-792382 - 35.48
TTGAACTTACTGTTTAA-----------TAATGTTAAATACAGATATATAAT--TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGTAAGTTCTTATTTAACGGAAGGGGTATATTTTTAAATGTCGATAGAGAATGTTGGAGTTGGTT------CAGCTTCGTGGTTCAGCGGT-----------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
........................................TCGATGGAGAATGTTGGAGTTGG.................................................................................2312.001.000.000.001.00
..........TATTTAACGGAAGGGGTATATT................................................................................................................2212.000.000.000.002.00
........................................TCGATGGAGAATGTTGGAGTTGGTT------.........................................................................2512.002.000.000.000.00
..........................................GATGGAGAATGTTGGAGTTGG.................................................................................2112.000.002.000.000.00
...........................................................TTGGTT------CAGCTTCGTGGTTCGGCG.......................................................2412.000.000.000.002.00
.........................................................AGTTGGTT------CAGCTTCGTGG..............................................................1911.000.001.000.000.00
..............TAACGGAAGGGGTATATT................................................................................................................1811.000.000.000.001.00
..TAAGTTCTTATTTAACGGAAGGGGTA....................................................................................................................2611.000.000.000.001.00
...AAGTTCTTATTTAACGGAAGG........................................................................................................................2111.000.001.000.000.00
......................................................TGGAGTTGGTT------CAGCTTCGTGGTT............................................................2411.000.000.000.001.00
................................................GAATGTTGGTGTTGGTT------CC.......................................................................1911.000.000.000.001.00
.....................................................TTGGAGTTGGTT------CAGCTTCCTGGTTCT..........................................................2711.000.000.000.001.00
........................................TCGATGGAGAATGTTGGAGTTGGT................................................................................2411.000.001.000.000.00
............................TATTTTTATATGTCGATGGAGAATG...........................................................................................2511.000.000.000.001.00
............................................................TGGTT------CAGCTTCGTGTTTCGG.........................................................2111.000.000.000.001.00
.....................................................TTGGAGTTGGTT------CAGCTTCGTGGTTC...........................................................2611.000.000.000.001.00
..TAAGTTCTTATTTAACGGAAGGGG......................................................................................................................2411.001.000.000.000.00
...............................................................TT------CAGCTTCGTGGTTCGG.........................................................1811.000.000.000.001.00
........................................................GAGTTAGTT------CAGCTTCGTGGTTCGG.........................................................2511.000.000.000.001.00
....................................TATGTCGATGGAGAATGTTGG.......................................................................................2111.000.000.000.001.00
......................................TGTCGATGGAGAATGTTGGATTTGG.................................................................................2511.000.000.000.001.00
......................................................TGGAGTTGGTT------CAGCTTCGTGGTTCGG.........................................................2711.000.000.000.001.00
...........................................................TTGGTT------CAGCTTCGTGGTTCGG.........................................................2211.000.000.000.001.00
................................TTTATATGTCGATGGAGAATG...........................................................................................2111.001.000.000.000.00
...........................ATATTTTTATATGTCGATGGAGAATG...........................................................................................2611.000.000.000.001.00
...................................................GTTTGGAGTTGGTT------CAGCTTCGTGG..............................................................2511.000.000.000.001.00
...AAGTTCTTATTTAAAGGAAGG........................................................................................................................2120.500.000.500.000.00
...........................................................TTGGTT------CAGCTTCGTTGTTCGG.........................................................2211.000.000.000.001.00
........................................TCGATGGAGAATGTTGGAGTTG..................................................................................2211.000.000.000.001.00
...........................................................TTGGTT------CAGCTTCGTTGTTCGGCGG......................................................2511.000.000.000.001.00
......................................TGTCGATGGAGAATGTTGGAGTTGG.................................................................................2511.000.000.000.001.00
..TAAGTTCTTATTTAACGGAAGTGGTA....................................................................................................................2611.000.000.000.001.00
......TTCTTATTTAACTGAAGGGGTATAT.................................................................................................................2511.000.000.000.001.00
...................................................TGTTGGTGTTGGTG------CAGC.....................................................................18140.070.000.000.070.00
............................................................TGGTT------CAGCGTCGTGGTTCGG.........................................................2111.000.000.000.001.00
...........................................................TTGGTT------CAGCTTCGTGGTTCCGG........................................................2311.000.000.000.001.00
........................................................GAGTTGGTT------CAGCTTCGTGGTTCGG.........................................................2511.000.000.000.001.00
.............TTAACGGAAxGGGTATATTTTTATATGTC......................................................................................................2811.001.000.000.000.00
4205 scaffold_12944:118162-118236 - 34.11
TTGAACTTACTGTTTAA----TAATGTTAAATACAGATATATAATT-------AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAATATTAATATTTTAAAATTAATAAAAAATTTAAATATATTATTATTTCTTAAATTTGCATTGTTTTCGTTTT-------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
............................................TTATTTCTTCGATTTGCA................................................................................1811.000.000.000.001.00
4026 scaffold_12911:1946371-1946451 - 29.53
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT--------------------TAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
----ATTTACCATATGAAGATTTTAATTAGGCATGTGTACATATGTAAGTCATGCCTTTCCTAAATTTGCCTAGATTACACTTT-------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
................AAGATTTTAATTAGGCATGT...................................................................................................................2011.001.000.000.000.00
3335 scaffold_13744:138976-139031 + 28.68
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
--------AATATTTAAAAATATGAAATAGAATTATATAATTAACAATATATTGTTATCGAATT-------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
5812 scaffold_13333:537194-537254 - 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CCCCCTTAAATATTTAACATTCTAAAATAGAATTATATAATTAACGACATATTGTCATCGA----------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...CCTTAAACCTTTAACATT..............................................................................................................1811.000.000.000.001.00
..CCCTTACATCTTTAACATT..............................................................................................................1911.000.000.000.001.00
1440 scaffold_13089:396773-396829 + 27.13
TTGAAC-------------TTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAATATAATATGAAATGTTAAAGTATTTAAAAATATTAAATAGAATTATATAATTAA---------------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..........................TCAAATATATTAAATAGA....................................................................................................1811.000.000.000.001.00
.............AATGTTAAAGTATTTACACA...............................................................................................................2011.000.001.000.000.00
3338 scaffold_13744:210018-210079 + 26.28
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAACATTTTTTTTTCGATAAATTCAATTAATGACAT--AAATAAAGCCTCGTTACCA-------------------------------------------------------------------ACATTTT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
2502 scaffold_13272:460225-460278 + 24.03
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAAAAGTGAAAAATTAAAACTATACAAAAAAAATAAAGAATGGAAGTGTCCTGG-----------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..............................AAATCAAGAAxGGAAGTGTC.................................................................................19115.009.000.002.004.00
...............................AATCAAGAAxGGAAGTGTC.................................................................................18113.005.000.001.007.00
...............................AATCAAGAAxGGAAGTGTCCT...............................................................................2018.006.001.000.001.00
................................ATCAAGAAxGGAAGTGTCCT...............................................................................1912.000.000.000.002.00
..............................AAATCAAGAAxGGAAGTGTCCT...............................................................................2112.002.000.000.000.00
...............AAATCTATAAAAAAAAAA..................................................................................................18110.090.000.000.000.09
.........................AAAAAAAATAGAGAAAGGA.......................................................................................1911.001.000.000.000.00
.......................ACAAAAAAAAGAAAGAAA..........................................................................................18120.080.000.000.000.08
.........................AAAAAAAATAAAGGAAGGA.......................................................................................1920.500.000.000.000.50
.........................AAAAAAAAAAAAGAAGGG........................................................................................18110.090.000.000.000.09
..........................ATAAAAATAAAGAATGGAC......................................................................................1911.001.000.000.000.00
..........................AAAAAAATAAAGAGAGGA.......................................................................................1811.001.000.000.000.00
.....................AAACAAAAAAAAAAAAGAA...........................................................................................19350.030.000.000.000.03
...........................AAAAAAGAAAGAAGGGAA......................................................................................1840.250.000.000.250.00
...............................AATAATGTATGGAAGTGT..................................................................................1811.000.000.001.000.00
..........................AACAAAATAAAGAAAGGA.......................................................................................1811.000.000.000.001.00
..........................AAAAAAAAAAAGAAGGGA.......................................................................................18110.090.090.000.000.00
2831 scaffold_13339:1231161-1231205 + 23.26
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CCGAACTTACAAAAAAAAAAAATAAAATATATATATATATTAAAA--------------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
........ACAAAAAAAAGAAAGAAA.........................................................................................................18120.080.000.000.000.08
.............AAAGAAAAATAAAAGATA....................................................................................................1840.250.000.000.250.00
....TGTTACAAAAAAAAAAAA.............................................................................................................18120.080.000.080.000.00
............................ATAGAxGTATATTAAAA--------------------------------------------------------------------------------------1820.500.000.000.500.00
..........AAAAAAAAAAAAGAAAAGA......................................................................................................19480.020.000.020.000.00
.........GAAAAAAAAAAAAAAAAAT.......................................................................................................19490.020.000.000.000.02
........ACAAAAAAAAAGAAGAAA.........................................................................................................1890.110.000.000.110.00
..........AAAAAACAATAATAAAAT.......................................................................................................1840.250.000.000.250.00
......AGACAAAAAAAAAAAATA...........................................................................................................18130.080.000.000.000.08
...........AAAAAGAAAAATAAAAAAT.....................................................................................................19120.080.000.000.000.08
4854 scaffold_13099:1346984-1347031 - 22.48
TTGAACT-TACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAGCTGCGCGGCTTAAAATATATTAACATAAATAAATAAACAAATT------------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
1740 scaffold_13144:125598-125645 + 22.48
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCAAACAAAAATATTAATGATGAAAAATAAATAAAAAAAAAAAAAATT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
......................AAAAAGAAAAAAAAAAAAAAAAA......................................................................................23240.080.000.040.000.04
............................AAAGAAAACAAAAAAAAA.....................................................................................18460.040.000.000.000.04
.......................AAAAGAAATAACAAAAAA..........................................................................................18110.090.000.000.000.09
......................AAAAAACAATAAAAAAAAAA.........................................................................................20250.040.000.000.000.04
.........................AATAAAGCAAAAAAAAAAA.......................................................................................19120.080.000.000.000.08
............................GAAAAAAAAAAAAAAAAAT....................................................................................19490.020.000.000.000.02
...............................TAAAAAAAAAATAAATG-----------------------------------------------------------------------------------1870.140.000.000.000.14
............................AAACAAAAAAAAGAAAAA.....................................................................................18510.020.000.000.000.02
.......................AGAACAAATAAAAAAAAAA.........................................................................................19110.090.000.000.000.09
............................AAACAGAAAAAAAAAAAA.....................................................................................18380.030.000.000.000.03
.........................AATGGATAAAAAAAAA..........................................................................................16170.060.000.000.060.00
.........................GATAAGTAAAAAAAAAAAA.......................................................................................1950.200.000.200.000.00
........................AAATCTATAAAAAAAAAA.........................................................................................18110.090.000.000.000.09
............................AAAGAAAAAAAAAAAGAA.....................................................................................18490.020.000.000.000.02
.........................AATAGAAAAAAAAAAAAAAA......................................................................................20240.040.000.040.000.00
.......................AAAAGGAATAAAAAAAAAAA........................................................................................2030.330.000.330.000.00
......................AAAAAAAAATAAACAAAAA..........................................................................................19430.020.000.020.000.00
..........................ATGAAGAAAAAAAAAAAAA......................................................................................1990.110.110.000.000.00
............................AAATAGAAAAAAACAAAA.....................................................................................18120.080.000.000.080.00
.......................AAAAGAAAGAAAAAAAAAA.........................................................................................19300.030.000.000.000.03
.......................AAAAGAAAGAAAAAAAAAAAA.......................................................................................21120.080.000.000.080.00
.....................GAAAAAGAAAGAAAAAAA............................................................................................1870.140.000.000.140.00
....................TGAAAAGAAAATAAAAAAA............................................................................................1950.200.000.000.000.20
.....................GAAAAAGAAAAAAAAAAAAA..........................................................................................20150.070.000.070.000.00
.........................AATAAAAAAAAAAGAAAAAA......................................................................................20340.030.000.030.000.00
.........................AAGAAAGAAAAAAAAAAAA.......................................................................................19220.050.000.050.000.00
.....................GAAAAGTAAAGAAAAAAAAAA.........................................................................................2120.500.000.500.000.00
...................ATGAAAAAAAAAGAAAAAA.............................................................................................19120.080.000.000.080.00
............................GAAGAAAAAAAAAAAAAA.....................................................................................18450.020.000.000.000.02
............................AAAGAAAAACAAAAAAAA.....................................................................................18430.020.000.000.000.02
1500 scaffold_13099:1359562-1359609 + 22.48
TTGAACT-TACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAGCTGCGCGGCTTAAAATATATTAACATAAATAAATAAACAAATT------------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
2388 scaffold_13266:13891099-13891140 + 21.71
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAACCACTTGTTGAAATACTTTAAATACTGATATGAAGTT-----------------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
5980 scaffold_13337:22822410-22822460 - 21.71
TTGAACTTACTGTT--TAATAATGTTAAATACAGATAT-ATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAATCTTATATTTTCTAAAAATCATGGCTATCTATAAAATCTTTAAAGCT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo


droBip1 - 43 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1841 scf7180000395368:41128-41264 + 48.37
TTGAACTTACTGTTTAATA-ATGTTAAATACAGATAT---------ATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGG-------------TCCCCGCCATATTCC--------------------------------------
TTGAATTTTCTGTATCAAAAATTTAAAATTAAAATATGTTTTTCTTATTATTAATTT-------------------------------------------------------TTACTAAATTATCTTATTCTTATCATTTCATAGCCATTTTTCTGTTTTCATTTTATTTGTTGCATATGCGATAGACATCT
SizeHit CountTotal Norm
266 scf7180000391857:39032-39151 + 47.29
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCT--------GGCTC---GTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAAACTCTTTATTTAAATTGTACAAAAAATATCCAAGAATTTAATGGCTCAGACAAAAACCAGCTTCCCGACAGGCAAGTATCCGGTTGGTCTGCGCTTGGATTGTTCTTTGTATGTA----------------------
SizeHit CountTotal Norm
1868 scf7180000395393:21823-21906 + 42.4
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTA--CGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAATATATTTATACGT-ATG-CACATACATATATGAAAATAAAGTTACCTTGGATAAGTGATTTAATGTTCCGGTTGTATGGTT-----------------------------------------------
SizeHit CountTotal Norm
4768 scf7180000394494:5379-5467 - 36.62
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTAT-----GGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TG-------TTGTTGAAAAATGTGTAAAATTAAAATTTTTTTTAAATTGCCTTTTTTGCAATTGAATAGCCCGGCGAAGTTGGCTGTCTGCGGTT-----------------------------------------
SizeHit CountTotal Norm
7211 scf7180000396794:68412-68463 - 27.13
TTGAACTTACTGTTTAATAATGTT----AAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAAACCACTGTTTAATAAAGTCTTCAAAAACTAGATTTATTTGTAATGTT-----------------------------------------------------------------------------------
SizeHit CountTotal Norm
6919 scf7180000396708:1898052-1898104 - 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTAAAATTACAAATAAATTAGTTTAAATATAAATTTAAAACTAATTTTACCTT------------------------------------------------------------------------------
SizeHit CountTotal Norm
6571 scf7180000396515:8068-8110 - 26.36
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTCAATATACCATTCAATAATGGTCAATACATATATATAATTA----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
343 scf7180000392031:6400-6459 + 26.16
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACT----ATTTATTTCCAATTTATACATTTAATCGTTTAAAGTTATCTCTGTTGCGCTTT-------------------------------------------------------------------
SizeHit CountTotal Norm
92 scf7180000391519:31027-31079 + 25.87
TTGAACTTACTGTTTAATAA------TGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAATTTTTAAATTTAATAAATTTTTTATTAAATTTAAA-ATAAAATTAAAATT-----------------------------------------------------------------------------------
SizeHit CountTotal Norm
3634 scf7180000396831:628-676 + 25.58
TTGAACTTACTGTTTAATAATGTTAAATACAGATATAT----AATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGGACTTTATTTTTATCAAGGTTTAGTTCAAATTTATTCGAAATTAAA--------------------------------------------------------------------------------------
SizeHit CountTotal Norm
4812 scf7180000394593:197-259 - 25.51
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTTTTACATTTATTAATAATATTTAAA-GAAAAATACCGCTGAAAATACC---GCCGCAGCTTATT----------------------------------------------------------------
SizeHit CountTotal Norm
5108 scf7180000395008:5955-6005 - 24.62
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTCTAATCATTGATGAATAATGGAAAATAAT--AATAAAACTCATGTTGTTTT------------------------------------------------------------------------------
SizeHit CountTotal Norm
3492 scf7180000396740:377570-377622 + 23.58
TTGAACTTACTGTTTAATAATGT--TAAATACAGATAT--ATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGAGCTGTGCGATTAAAAAAAATGGTAATTAAAAAAAGGAAAATTTAAAATT-----------------------------------------------------------------------------------
SizeHit CountTotal Norm
7019 scf7180000396714:995662-995708 - 23.32
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGACAATTAA---ATAATAGTGTTAAATGCAAGCATATAACTACAATTAC---------------------------------------------------------------------------------
SizeHit CountTotal Norm
102 scf7180000391528:13960-14000 + 23.26
TTGAACT-TACTGTTTAATAATGTTA-AATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAATTGTATAGGTTAGCAATTTTAAAATACATATATATA--------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
5485 scf7180000395368:65086-65143 - 23.26
TTGAACTTACTGT-------------TTAATAATGTTAAATACAG----ATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGTAAACAGTGTTATGTGAACAAGTTTTATAATAATAAACAAATTATAATATATAAT------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
1692 scf7180000395182:50005-50049 + 22.48
TTGAACTTACTGTTTAATA-ATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGGGCATGTTTTAAAGTACATATTACAGAAATATATATACTTAA---------------------------------------------------------------------------------------
SizeHit CountTotal Norm
5791 scf7180000395763:997-1044 - 22.33
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCCAAATCACTGTCGCACTGTGTTATTTATATATTTTCAAAAAATTGC-----------------------------------------------------------------------------------
SizeHit CountTotal Norm
612 scf7180000393223:22660-22713 + 22.07
TTGAACTT----------ACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTTTCTTATTTTAATTATTTAATTAATA-AATTAAATTCAAAAACGAAAACGAA--------------------------------------------------------------------------------------
SizeHit CountTotal Norm
6025 scf7180000395973:4452-4503 - 21.92
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGACTAGTTTGCTTAGAAACA-TACAGACAGCT--ATGCTTAAA-------------------------------------------------------------TTAACTCAGG---------------
SizeHit CountTotal Norm
180 scf7180000391670:14722-14777 + 21.71
TTGAACTTACTGTTTAATAA--------TGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAAAATATATTAAATTATATTTTTCGATTAAAAAAAATGGGAATTTAATTGAAACT-----------------------------------------------------------------------------------
SizeHit CountTotal Norm


dp4 - 11 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1819 Unknown_group_9:35228-35362 - 48.82
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAA-AGTTGCCTTGGCTACGA---------CTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTAT-GGTCCCCGCCATATTCC
TCAAGCCCA--GCCTGATAATCGTTATTCTAGATTTCTAAAAAATAATTTCCTTATTTATGAGTTAAGTTTCCTACCCGCTATTTTATACGGTTCTTAGTGGTTTTCAATCTCCTATTTACTACTATTTTCCGCC-----CT
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
...............................................................................................TTAGTGTTTTTCCATCTCCTAT.........................2211.000.001.000.000.00
1714 chrXR_group6:2307013-2307100 - 28.51
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTA--------AAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
A----------GTCTCATAGTACTAAATAAGTCATTAGAATCATTCTCATGTATTTATCTTATTGTTGATCTACAGGCGCCTTGCCATAAATCCAAT------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
1762 chrXR_group8:4582246-4582307 - 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TG----------------------------------------------GCCTTGGCCACGTCTAAGCCACTTTTCTGTGCGTTTGCGGCTGCATCAGAGTCTGCGTCT-----------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
1370 chr3:11521407-11521454 - 24.81
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAAAATAAATTTAAAAAATAATAAATCAATATATTATATTAAATTT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
1990 Unknown_group_158:10620-10659 - 18.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CCGAATATAAGGTTATTCAGTGTAAAGTTCATATACATAA-------------------------------------------------------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
..............TTGCAGTGTAAAGTTCAT...................................................................................................1811.000.001.000.000.00
...............TGCAGTGTAGAGTTCATA..................................................................................................1811.000.001.000.000.00
1674 chrXL_group3a:2019125-2019166 - 18.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-----------------------------------------------------------------------------------------AAACGATGTGTTATAAAGAATTATTGTATCTGCTAGATACC
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
368 chrXL_group1e:861863-861900 + 17.67
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAAGCTAAAATTTCATAATATAGTACTGAGAAACGA---------------------------------------------------------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
2239 Unknown_singleton_663:1957-1978 - 11.63
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
-------------------------------------------------------------------------------------------------------------ACTAGAGGCCGCGCCACATTCA
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
None
1677 chrXL_group3a:2107288-2107301 - 6.98
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
AAAGACTTACTCTT---------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
None None
940 Unknown_group_734:4438-4454 + 6.98
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
------------------------------------------------------------------------------------------------------------------GTTTTCAGCTACATCTC
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
None
1219 chr2:10744114-10744120 - 3.1
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CAGAATT----------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
None None


droPer1 - 14 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4147 super_3:1090211-1090335 - 48.81
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATT------AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTACCATATAGCTTGCATATGCTACATACATATATGTAGTTTCGAAGAAATTTACAATTTTAAAAAGCTGATG----------AATGCTGTCCTTGGGCTCTAAATATCCTTAAATATCCGTATCCTTTATATT--
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
4734 super_38:45891-46002 - 43.41
TTGAACTTACTGTTTAATAATGTTA-AATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GGACGCATA-TGTTTAATAGCGACAGCATACTGC--CATAATTACCACG-ACTTGGCCCCAA-TTGTTGACTTACAAAAGCAGCA----GTACGC--TTATGTGGATTCAGTT---------GGCACATTGC
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
.........................................................................................GTACGC--TTATGTGGATTCAGTT---------GG........2414.004.000.000.000.000.00
..........................................................................................TACGC--TTATGTGGATTCAGTT---------GG........2312.001.001.000.000.000.00
...............TATAGCGACAGCATACTGC--C...............................................................................................2011.000.001.000.000.000.00
.......................................................................TTACAAAGGCGGCA----GTACGC--...................................2011.001.000.000.000.000.00
...................................................................TGACTTACAAAAGCAGCA----GTACG......................................2311.001.000.000.000.000.00
................ATAGCGACAGCATACTGC--CAT.............................................................................................2111.000.001.000.000.000.00
................................................................................CAGCA----GTACGC--TTTTGTGGA..........................2011.001.000.000.000.000.00
........................................................................................................GATTCAGTT---------GGCACATTGC1911.000.001.000.000.000.00
.........................................................................................GTACGC--TTATGTGGATTCAGTT---------GGC.......2511.001.000.000.000.000.00
..........................................................................................TACGC--TTATGTGGATTCAGTT---------GGCAC.....2611.000.000.000.000.001.00
...................................................................................................ATGTGGATTCAGTT---------GGCACA....2011.000.001.000.000.000.00
.....................................................TGGCCCCAA-TTGTTGAGTTACAAAAGC...................................................2711.001.000.000.000.000.00
.................................................................................AGCA----GTACGA--TTxTGTGGA..........................1811.000.001.000.000.000.00
..........................................TCCCACG-ACTTGGCCCCAA-TTG..................................................................2211.000.001.000.000.000.00
..........................................................................................TACGC--TTTTGTGGATTCAGTT---------GG........2311.001.000.000.000.000.00
2350 super_1075:8629-8715 + 36.02
TTGAAC-----------------TTACTGTTTAATAATGTTA-AATACAGATATATAATT-AAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAATCCCGCTGTAAACAAATAATCATGTTTA-TTATATTACAATATACATATTAATTTGAAAATAATACTTACTACGGATGGCTAG--------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
TTAAATCCCGCTGTAAACAAATAAT.............................................................................................................................2512.000.000.000.000.002.00
TTAAATCCCGCTGTAAACAAATAA..............................................................................................................................2412.000.000.000.000.002.00
.TAAATCCCGCTGTAAACAAATA...............................................................................................................................2211.000.000.000.000.001.00
TTAAATCCCGCTGTAAACAAATACTC............................................................................................................................2611.000.000.000.000.001.00
TTAAATCCCGCTGTAAACAAATC...............................................................................................................................2311.000.000.000.000.001.00
.................................................................TAATACTTACTACGGATGG..................................................................1911.001.000.000.000.000.00
....ATCCCGCGGTAAACAAATAATCATGT........................................................................................................................2611.000.000.000.000.001.00
TTAAATCCCGCTGTAAACTAATAAT.............................................................................................................................2511.000.000.000.000.001.00
TTAAATCCCGCTGTAAACAAATA...............................................................................................................................2311.000.000.000.000.001.00
TTAAATCCCGCTGTAAACAAATCATCAT..........................................................................................................................2811.000.000.000.000.001.00
TTAAATCCCGCTGTAAACAAATAATCA...........................................................................................................................2711.000.000.000.000.001.00
.................................................................TAATACTTACTACGGATGGGTAG--------------------------------------------------------------2311.000.001.000.000.000.00
TTAAATCCCGCTGTAAAACAA.................................................................................................................................2111.000.000.000.000.001.00
1490 super_116:43407-43476 + 33.33
TTGAACTTACTGTTTAAT---AATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-AAAATTATCATTTCATTTTCATATTAAATACCAAAATGTAATAAGCATTAAATTTGCTGCAATTTGTTG---------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
...................................................AAATTTGCTGCGATTTGGTG---------------------------------------------------------------2011.000.000.000.000.001.00
1414 super_103:71630-71674 + 25.58
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
--------ACCGGTTAATAATCTTTACTACATAAATATATTTAAACTGACATT------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
4731 super_37:637871-637917 - 23.26
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GCAGATTGACATCTAGATTATGCTAAATACATATATATATATATAGT------------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
..........................ATACATATATACATATATAGT------------------------------------------------------------------------------------2170.140.000.000.000.000.14
....................TACTGAATACATATATATAT...........................................................................................2011.000.000.000.000.001.00
866 super_42:450925-450978 + 23.17
TTGAACTT--------ACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAATTTCGCGCCGTCCTGTCCAACTA--CCAATTACCGGGATATATTTAAATTT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
178 super_2:5896504-5896541 + 22.48
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
--------ACTATTTAATATTGAAAGATATATATATATATATAAAG-------------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
..............TAATATTGAAAGAAAAATATAT...............................................................................................2211.000.000.000.001.000.00
3996 super_1:1183154-1183195 - 20.93
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAATTTATTATTTATTTATTTCAAAAAGATGTCCTTTATT-----------------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
4886 super_53:322323-322369 - 19.74
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTCGAAGAGA-----------------------------------------------------------------------------------CCCTGATC-CCATACAATCGAGATAACATTCATATTCA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
2473 super_1363:4026-4065 + 19.38
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
-------------------------------------------------------------------------------------------AGCTATAGTCTTCTTTTAATTGTTTCGCCTTTTTTATACC
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
513 super_11:2658143-2658184 + 18.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-----------------------------------------------------------------------------------------AAACGATGTGTTATAAAGAATTATTGTATCTGCTAGATACC
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
5387 super_136:71986-72025 - 18.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CCGAATATAAGGTTATTCAGTGTAAAGTTCATATACATAA-------------------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
4017 super_1:10115919-10115924 - 3.1
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
AAGAAC-----------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
None None


droWil1 - 92 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1683 scaffold_180935:22520-22643 + 51.27
TTGAAC--TTACTG--TTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATATACCCTTGCAGTCCTTGGTAATAATAATTTTACATGTACAA---AATTTG--TTTTCTGCAACTC---AATTCATCAGAATACAAACAATTTTACTCTATTTTACAATTTGTTCTTCTTCC---CTCATTCC
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.........TGCAGTCCTTGGTAATAATAATTTTACA..................................................................................................2852.800.002.800.000.00
.........TGCAGTCCTTGGTAATAATAATTTTAC...................................................................................................2751.200.201.000.000.00
................................................................................................TCTCTATTTTACAATTTGTTCTTCT..............2522.500.002.500.000.00
.........................................CAA---GATTTG--TTCTCTGCAACT....................................................................2140.750.000.000.000.75
................................................................................................TCTCTATTTTACAATTTGTTCTTCTTCT---........2821.000.001.000.000.00
..............TCCTAGGTAATAATAATTTTACATGT...............................................................................................2660.330.000.330.000.00
.........TGCAGTCCTTGGTAATAATAATTTTA....................................................................................................2650.400.000.400.000.00
.......................................................................................................TTTACAATTTGTTCTTCTTCC---CGCAT...2621.000.001.000.000.00
.........TGCAGTCCTAGGTAATAATAATTTTACA..................................................................................................2850.400.000.400.000.00
.................................TACATGTTCAA---AATTTG--TTTTCTGCAAC.....................................................................2840.500.000.500.000.00
........TTGCAGTCCTTGGTAATAATA..........................................................................................................2150.400.000.400.000.00
.......................................................................................................TTTACAATTTGCTCTTCTTCC---CTTA....2521.000.001.000.000.00
......................................................................................................TTTTACAATTTGTTCTTCTTCC---CT......2420.500.000.500.000.00
..................................................................................................TCTACTTTACAATTTGTTCTTCTTCC---CG......2820.500.000.500.000.00
...TACCCTTGCAGTCCTAGGTAATAATAA.........................................................................................................2740.250.000.250.000.00
....................................................................................................TATTTTACAATTTGTTCTTCTT.............2220.500.000.500.000.00
........................................TCAA---AATTTG--TTTTATGCAACTC---AAT.............................................................2640.250.000.250.000.00
..CTACCCTTGCAGTCCTTGGC.................................................................................................................2040.250.000.250.000.00
...TACCCTTGCAGTCGTTGGCA................................................................................................................2040.250.000.000.000.25
...................................................................................................CTATTTTACAATTTGCTCTTCTTCC---CT......2720.500.000.500.000.00
...TACCCTTGCAGTCCTTAGTAATAATAGT........................................................................................................2840.250.000.250.000.00
.........TGCAGTCCTAGATAATAATAATTTTACA..................................................................................................2850.200.000.200.000.00
.........................................................................................................TACAATTTGTTCTTCTTCC---CGCAT...2420.500.000.500.000.00
.TATACCCTTGCAGTCCTTGGTAATAAGT..........................................................................................................2840.250.000.250.000.00
.TATACCCTTGCAGTCCTTGGT.................................................................................................................2140.250.000.250.000.00
....................TTAATAATAATTTTACATGTT..............................................................................................2150.200.000.200.000.00
........................TAATAATTTTACATGTTCAA---AATT....................................................................................2440.250.000.250.000.00
........TTGCAGTCCTTGGGAATAATATTTT......................................................................................................2550.200.200.000.000.00
.........TGCAGTCCTTGGAAATAATAATTTTACA..................................................................................................2850.200.000.200.000.00
.........................................................................................................TACAATTTGCTCTTCTTCC---CTTAT...2420.500.000.500.000.00
........TTGCAGCCCTTGGCAATAAT...........................................................................................................2050.200.000.200.000.00
...TACCCTTGCAGTCCTTAGTAATAATAG.........................................................................................................2740.250.000.250.000.00
.........TGCAGTCCTTGGCAATAAT...........................................................................................................1950.200.000.000.200.00
........................TAATAATTTTACATGTTCAA---AATTGG--T...............................................................................2740.250.000.250.000.00
..........GCAGTCCTTGGTAATAATAATTTTAC...................................................................................................2650.200.000.200.000.00
.........TGCAGTCCTTGGCAATAATATTTT......................................................................................................2450.200.000.200.000.00
.........TGCAGTCCTAGGTAATAATAATTTTA....................................................................................................2650.200.000.200.000.00
........................................................................................................TTACAATTTGTTCTTCTTCT---T.......2130.330.000.330.000.00
...TACCCTTGCAGTCCTTGGCAATAATAT.........................................................................................................2740.250.000.250.000.00
........TTGCAGTCCTTGGTAATAATAATTTA.....................................................................................................2650.200.000.200.000.00
..............TCCTTGGTAATAATAATTTTACGTGTT..............................................................................................2750.200.000.200.000.00
...................................................TG--TTTTCTGCAACTC---AATTCAT.........................................................2260.170.000.170.000.00
.................................................................................................CTCTATTTTACAATTTGTTCTTCTTC............2620.500.000.500.000.00
........TTGCAGTCCTTGGTAATA.............................................................................................................1850.200.000.200.000.00
...TACCCTTGCAGTCCTTGGTAATAA............................................................................................................2440.250.000.250.000.00
.........TGCAGTCCTTGGTCATAATATTTT......................................................................................................2450.200.000.200.000.00
ATATACCCTTGCAGTCCTTGGCA................................................................................................................2340.250.000.250.000.00
............AGTCCTTGGCAATAATATT........................................................................................................1950.200.000.200.000.00
..............TCCTTGGTAATAATAATTTTATATGTT..............................................................................................2750.200.000.200.000.00
.........TGCAGTCCTTGGCCATAAT...........................................................................................................1950.200.000.200.000.00
........TTGCAGTCCTAGGTAATAATAATTT......................................................................................................2550.200.000.200.000.00
.................................TACATGTTCAA---AATTGG--TTTTCTGCAAC.....................................................................2840.250.000.250.000.00
......TCTTGCGGTCCTTGGTAATAATAATTT......................................................................................................2740.250.000.250.000.00
....................................................................................................TATTTTACAATTTGTTCTTCTTCC---C.......2520.500.000.500.000.00
.TATACCCTTGCAGTCCTTG...................................................................................................................1940.250.000.250.000.00
.............GTCCTTGGTAATAATAATTTTACATGT...............................................................................................2750.200.000.200.000.00
..................................ACATGTTCCA---AATTTG--TTTTCTGCAACT....................................................................2840.250.000.250.000.00
.TATACCCTTGCAGTCCTTGGCCAT..............................................................................................................2440.250.000.250.000.00
.........TGCAGTCCTAGGTAATAATAATTT......................................................................................................2450.200.000.200.000.00
.........TGCAGTCCTTGGCAATAATAATTGTA....................................................................................................2650.200.000.200.000.00
....................................................................................................TATTTTACAATTTGTTCTTCTTCT---T.......2520.500.000.500.000.00
................................................................................................TCTCTATTTTACAATTTGTTCTTCTTC............2720.500.000.500.000.00
.TATACCCTTGCAGTCCTTGGC.................................................................................................................2140.250.250.000.000.00
...........CAGTCCTTGGCAATAATATTTTTACA..................................................................................................2650.200.000.200.000.00
.TACACCCTTGCAGTCCTTGGTAATAAT...........................................................................................................2740.250.000.250.000.00
................................TTACATGTTCAA---AATCTG--TTTTCTGCA.......................................................................2740.250.000.250.000.00
...TACCCTTGCAGTCCTTGGTAATAATAA.........................................................................................................2740.250.000.250.000.00
........TTGCAGTCCTTGGTAATAATAATTT......................................................................................................2550.200.000.200.000.00
.................................TACATGTTCAA---AATTTG--TTTTCTGCA.......................................................................2640.250.000.250.000.00
.....................................TGTTCAA---AATTGG--TTTTCTGCAAC.....................................................................2440.250.000.250.000.00
.........TGCAGTCCTTGTTAATAATAA.........................................................................................................2150.200.000.200.000.00
.........TGCAGTGCTTGGTAACAATAATTT......................................................................................................2450.200.000.200.000.00
......CCTTGCAGTCCTTGGTAATAATAATT.......................................................................................................2640.250.000.250.000.00
..ATACCCTTGCAGTCCTTGGAAA...............................................................................................................2240.250.000.250.000.00
...................................................................................................CTATTTTACAATTTGTTCTTCTTCT---........2520.500.000.500.000.00
.................................................................CTC---AATTCATCAATATACAAACAAT..........................................2570.140.000.140.000.00
....................................................................................................TATTTTACAATTTGTTCTTCTTCT---........2420.500.000.500.000.00
...........................TAATTTTACATGTTCAA---AATTTG--TT..............................................................................2540.250.000.250.000.00
..........GCAGTCCTTGGTAGTAATAATT.......................................................................................................2250.200.000.200.000.00
.TATACCCTTGCAGTCCTAGGTC................................................................................................................2240.250.250.000.000.00
6120 scaffold_180745:2575188-2575297 - 50.12
TTGAACTTACTGTTTA--ATAATGTTAAATACAGATATATA-ATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTAAATGTATTTTTTTCTTTATTATTAAATATATATATAAACATTTCATTTATATTGTGCATAA-TTGCGAG---GGCGAAATTGACGGGATGGATTTTTGATTTGCATAAAAT--------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..........................................................................................ATGTATTTTTGATTTGAA..........................18134.000.0027.006.001.00
..........TTTTTTCTTTGTTTTTAAA.........................................................................................................19140.070.000.070.000.00
.TATATGTATTTTTTTTTTT..................................................................................................................19220.050.000.050.000.00
..............................................................................GAAATGGACGGGATGGTT......................................1811.000.001.000.000.00
7948 scaffold_181130:3546443-3546566 - 49.61
TTGAACT--TACTGTTTAATAATGTTAAA-------TAC-AGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAATTTTTGTTATTTGATTATTTTCAAGCGGTTTTGCAGGTTTTCTTGTTCGACTTAAATTGTATTTGATTTGTTGTTTGTTTTGTTTGCTGGCAATCGATCAATGCATATTGATTGATTAT-----------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.....................................................................AATTTGTTGTTTGTGTTGT.....................................................1912.000.002.000.000.00
....ATTTTTGTTATTTGCTTATG.....................................................................................................................2011.000.001.000.000.00
............................................................................TGTTTGTTCTGTTTGTTGGC.............................................2011.000.000.001.000.00
.....................ATTGTCAAGCGGTGTTGCA.....................................................................................................1911.000.001.000.000.00
.......................................................................TTTGTTGTCTGATTTGTT....................................................1811.000.001.000.000.00
......................................................................ATTTGTTGTTTGTTTTGTG....................................................1911.000.001.000.000.00
......................................................................ATTTGTTGTCTGATTTGT.....................................................1811.000.001.000.000.00
......................................................................ATTTGTTGTTTGTGTTGT.....................................................18110.090.000.090.000.00
...........................................................................TTTTTTGTTTTGTTTGGT................................................18230.040.000.040.000.00
.................................TTTTGCCGGTTTTGTTGTT.........................................................................................1911.001.000.000.000.00
........................................................................TTGTTGTTTGTTTTGTTGG..................................................1920.500.000.000.500.00
.................................................................ATTTGxTTTGTTGTTTGTTTG.......................................................2011.001.000.000.000.00
......................................................................ATATTTTGTTTGTTTTGTT....................................................1960.170.000.170.000.00
............................................................................TGTCTGxTTTGTTTGCTGGC.............................................1911.000.001.000.000.00
...........................................................................GTxTTTGTTTTGTATGCTGG..............................................1911.000.000.000.001.00
......................................................................GTTTGTTGTTTGTTTTGGTTG..................................................2130.330.000.330.000.00
.....................................................................GATTTGTTGATTTTTTTGT.....................................................1930.330.000.000.000.33
......................................................................CTTTGTTGTCTGTTTTGT.....................................................1811.000.001.000.000.00
.......................................................................TTTGTTGTCTGATTTGTTT...................................................1911.000.001.000.000.00
..........................................................................ATTGTTTGTTCTGTTTGCTG...............................................2011.000.001.000.000.00
.........................................................................TGTTGTTGGTGTTGTTTG..................................................18400.030.000.030.000.00
................................................................AATTTGATTGGTTGTTTGT..........................................................1940.250.250.000.000.00
4377 scaffold_181154:2019331-2019470 + 46.07
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAAT----TAAAGTTGCCTT------GGCTACGACTTGCTGGCTCGTCGGTATG--GCTGCGATTGAGCTAT--GATCT-----------------GCATTTAATTATGGTCCCCGCCATATTCC
ATGG----------------GGTCAAAAACTGACATCAAAACTTGTAAAATTTCCCTTTTGGTTGGTGCGACTT------TTGTCGCTATTATATTGCGCTTAAGCCGTACAAACTTTAGTGCATAGGTGAAGGCATCTTAATGTGGGCTCCACTGCATGCC
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
............................................................................................................TACAAACTTTAGTGCATAGGTGAAGGC...........................27183.001.0082.000.000.00
............................................................................................................TACAAACTTTAGTGCATAGGTGAAGG............................26132.000.0032.000.000.00
...............................................................................................................AAACTTTAGTGCATAGGTGAAGGCA..........................25130.000.0030.000.000.00
.................................................................................TGTCGCTATTATATTGCGCTTCAGGCG......................................................27118.000.0018.000.000.00
........................................................TTTTGGTTGGTGCGATTT------TTGTCG............................................................................24114.000.0014.000.000.00
............................................................................................................TACAAACTTTAGTGCATAGGTGAAGGCA..........................28113.000.0013.000.000.00
...........................................TGTAAAATTTCCCTTTTGGTTGGTGCG............................................................................................27113.000.0013.000.000.00
.............................................TAAAATTTCCCTTTTGGTTGGTGCGA...........................................................................................26113.000.0013.000.000.00
................................................................................TTGTCGCTATTATATTGCGCTTCAGGCG......................................................28112.000.0012.000.000.00
........................................................TTTTGGTTGGTGCGACTT------TTGTCG............................................................................24111.001.0010.000.000.00
...................................................TTCCCTTTTGGTTGGTGCGATTT------TTGT..............................................................................27110.000.0010.000.000.00
....................................................TCCCTTTTGGTTGGTGCGATTT------TTGT..............................................................................2619.000.009.000.000.00
.........................................................................................................................................ATTGATGTGGGCTCCACT.......1819.000.000.000.009.00
...............................................................................................................AAACTTTAGTGCATAGGTGAAGGC...........................2419.000.009.000.000.00
...................................................................................TCGCTATTATATTGCGCTTCAGGCG......................................................2516.000.006.000.000.00
.....................................................................................................................TAGTGCATAGGTGAAGGCATCTTGA....................2516.000.006.000.000.00
.........................................................TTTGGTTGGTGCGATTT------TTGTCG............................................................................2316.000.006.000.000.00
.........................................................TTTGGTTGGTGCGATTT------TTGTCGC...........................................................................2416.000.006.000.000.00
.............................................TAAAATTTCCCTTTTGGTTGGTGCG............................................................................................2515.001.004.000.000.00
............................................................................................................TACAAACTTTAGTGCATAGGTGAAG.............................2515.000.005.000.000.00
.....................................................................................................................TAGTGCATAGGTGAAGGCATCTTGAC...................2615.000.005.000.000.00
...........................................TGTAAAATTTCCCTTTTGGTTGGTGT.............................................................................................2615.000.005.000.000.00
........................................................................................................................TGCATAGGTGAAGGCATCTTGATGT.................2514.000.004.000.000.00
........................................................................................................................TGCATAGGTGAAGGCATCTTGACGTG................2614.000.004.000.000.00
........................................................TTTTGGTTGGTGCGATTT------TTGTCGC...........................................................................2514.000.004.000.000.00
....................................................................................................................TTAGTGCATAGGTGAAGGCATCTTGA....................2613.000.003.000.000.00
..........................................TTGTAAAATTTCCCTTTTGGTTGGTGT.............................................................................................2713.000.003.000.000.00
...........................................TGTAAAATTTCCCTTTTGGTTGGTGCGA...........................................................................................2813.000.003.000.000.00
....................................................................................................TTCAGGCGTACAAACTTTAGTGCA......................................2413.000.003.000.000.00
.........................................................TTTGGTTGGTGCGACTT------TTGTCG............................................................................2313.000.003.000.000.00
...................................................................................................................TTTAGTGCATAGGTGAAGGCATCTT......................2513.000.003.000.000.00
................................................................................................................AACTTTAGTGCATAGGTGAAGGCA..........................2413.000.003.000.000.00
..........................................................................................................................................TTGATGTGGGCTCCACTC......1813.000.000.000.003.00
.....................................................................................................................TAGTGCATAGGTGAAGGCATCTTG.....................2413.000.003.000.000.00
...................................................TTCCCTTTTGGTTGGTGCGATTT------TTG...............................................................................2613.000.003.000.000.00
.........................................................................T------TTGTCGCTATTATATTGCGCTTCAGGCG......................................................2913.000.003.000.000.00
658 scaffold_180698:6806661-6806793 + 45.44
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACG----ACTTGCTGGCTCGTCGGTATGGCT---------GCG--ATTGAGCTATGATCTGCATTT-AATTATGGTCCC-----CGCCATATTCC
TATGATTTTCTATTCATGACTA------------------TTAAAAGGCTCTCGACTACGTGACAATTGCTAGCTG-GCAGTGTAATTACTAAAACTACGACATTGAAATTTAACTTGAAATTGATTTTTGATTACTTTTGAGTCATTTTTT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...................................................................................................................GTGAGATTGATTTTTGAT...................1811.000.001.000.000.00
..........................................AAAAGGCTCTCGACTACGTGA.........................................................................................2111.001.000.000.000.00
....................................................................................................................TGAAGTTGATTGTTGATT..................1811.000.001.000.000.00
.................................................................................................................ACTTGGATTTGATTTTTG.....................1820.500.000.500.000.00
6187 scaffold_180764:3662230-3662347 - 42.96
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC------------
TAAAATTAATTTTCAAGAGATATTATTTTTAAATATCGAATAAAA----------CTTCGACTTTTTGAATTGAATATGTGTT----ATTAAA----------TA-TTAAATTAAATATCCAACATATTCATTCCACTATCTT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
................................................................TTTGAATTAAATATGGGTT----........................................................1911.000.001.000.000.00
...........TTCAGTAGATATTATTTT..................................................................................................................1811.000.001.000.000.00
9917 scaffold_188447:298-410 - 41.22
TTGAACTTA-------------------CTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTGAGATTGTCAGAATTTGATTATTATACCCTGTAATTAGGTGGTAAACGA--GAATACCTAAATTACCCTGGGATA---GTGAAAAGCTTTTTCATCTGGCTGCGAATAGAGTAGGA--------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
....GATTGTCAGAAxTTGAGTAT..............................................................................................................................1911718.00958.00147.00598.0015.00
....GATTGTCAGAAxTTGAGTA...............................................................................................................................18195.004.0010.0062.0019.00
.....ATTGTCAGAAxTTGAGTAT..............................................................................................................................18178.000.0028.0037.0013.00
....GATTGTCAGAAxTTGATTAT..............................................................................................................................1913.001.000.000.002.00
....GATTGTCAGAAxTTGAATAT..............................................................................................................................1912.000.000.002.000.00
.....ATTGTCAGAAxTTGATTATA.............................................................................................................................1912.000.000.000.002.00
....GATTGTCAGAAxTTGAGTATT.............................................................................................................................2011.001.000.000.000.00
...AGATTGTCAGAAxTTGAGT................................................................................................................................1811.000.001.000.000.00
920 scaffold_180703:3918039-3918141 + 40.27
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
--GTACTTTGCTCTAAAATGTGCTAAAAATAAGCACATATTTAATTTTTAATTTATTTCAATTTATTAATTGATCAGTAAAACTGGGTT----ATATAATTTGAATCT-----------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...........................................ATTTTTAATTTCTTTCAATA....................................................................2016.000.003.003.000.00
...........................................ATTTTTAATTTCTTTCAAT.....................................................................1921.500.001.500.000.00
...........................................................AATTTTTTAACTGATCAG......................................................1811.000.000.000.001.00
......................................................................................GTT----ATATATTTTGAAGCT-----------------------1811.000.000.000.001.00
....................................................................ATTGATCAGTAAAACGGGC............................................1911.000.001.000.000.00
.........................................TTATTTTTAATTTCTTTCAAT.....................................................................2111.000.001.000.000.00
.......TTTATCTAAAATGTGCTA..........................................................................................................1820.500.000.500.000.00
...............AAATATGCTAAAAAGAAG..................................................................................................1811.000.001.000.000.00
..........................................TATTTTTAATTTCTTTCAAT.....................................................................2011.000.001.000.000.00
............................................TTTTTAATTTCTTTCAATA....................................................................1911.000.001.000.000.00
..................................................ATTTATTTAAATTTATTAAAT............................................................2111.000.001.000.000.00
.............................................TTTTAATTTCTTTCAATA....................................................................1820.500.000.500.000.00
..........................................TATTTTTAATTTCTTTCAA......................................................................1911.000.001.000.000.00
605 scaffold_180697:1269257-1269361 + 40.02
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGG----TATG-----G--CTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAGAAATTAAAGTTTAGAAATTTTTGA---------------AATGTTTTCCTAATTTTGATTTCCTAAATCGTTTAACAATATACAAATGCCTTGTG--TTTGTTATATTTTGCATTTAAT--------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
........................................................................................ATTCCTTGTG--TTTGATAT..................................18115.000.0014.000.001.00
.....................................................................................................CTGTTATATTTTGTATTT.......................1820.500.000.500.000.00
..................................................................................ATATAAATGCTTTGTG--TT........................................1811.000.001.000.000.00
........................................................................................ATGCCTCGTG--TTTGTTAGA.................................1911.000.001.000.000.00
6692 scaffold_180949:2693500-2693577 - 35.52
TTGAAC-----TTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTG-CCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCGACCCATTTTTACTATGTGATATATATATATATATATGTATAGTTGTAGTTGTCCTCTTCTACTAGTATTTGGCAC-----------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...................................ATATTTAxAGTTGTAGTTGT..................................................................................1921.000.001.000.000.00
..........................TATATATATATATTTAxAGTTGTAGTTG...................................................................................2720.500.000.500.000.00
............................TATATATATATTTAxAGTTGTAGTT....................................................................................2420.500.000.500.000.00
............................TATATATATATTTAxAGTTGTAGT.....................................................................................2320.500.500.000.000.00
...........................ATAGATATATATGTATGG............................................................................................18300.030.000.030.000.00
.................................ATATATTTAxAGTTGTAGTTGT..................................................................................2120.500.000.000.000.50
............................TATATATATCTGTATAGCT..........................................................................................1960.170.000.000.000.17
.................TGTGGTATATATGTATATATA...................................................................................................2160.170.000.000.170.00
.........................ATATATATATGTATGTATAGT...........................................................................................21330.030.000.030.000.00
...........................ATATATCTATATATATAGTT..........................................................................................20430.020.000.020.000.00
1696 scaffold_180949:32573-32653 + 34.32
TTGAACTTACTGTTTAATAATGT-TAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTT----GCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTGAATACGTA-----CATATGTACATACCTACATACATAACTTGCCTTGCCATGGCTTTGGCTTTGGCTTTGGCTACTTGGTTTG--------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.........................................................ATTGGCTCTGGCTTTGGC.............................................................1816.000.002.000.004.00
.....................................................TGGCTTTGGCTCTGGCCT.................................................................1814.000.000.000.004.00
.........................................................TTTGGCTTTGGCTCTGGCC............................................................1914.000.000.000.004.00
..........................................................TTGGCTTTGGCTCTGGCC............................................................1813.000.000.000.003.00
.........................................................TCTGGCTTTGGCTGTGGC.............................................................1813.002.000.000.001.00
.........................................................TTTGGCTTTGGCTCTGGC.............................................................1821.500.000.000.001.50
.........................................................TCTTGCTTTGGCTTTGGC.............................................................1812.000.000.000.002.00
..........................................................TTGGCTCTGGCTTTGGCCAC..........................................................2012.000.000.000.002.00
......................................................GGCTTTCGCTTTGGCTCTG...............................................................1911.000.001.000.000.00
........................................................CTTTGGCTCTGGCTTTGGA.............................................................1920.500.000.000.500.00
........................................................CTTTTGCTTTGGTTTTGG..............................................................1830.330.000.330.000.00
...AATACGGA-----GATATGTACA..............................................................................................................1830.330.000.330.000.00
.........................................................GTTGGCTTTGGCTGTGGC.............................................................1811.000.001.000.000.00
..........................................................TTGGCTCTGGCTTTGGCC............................................................1811.000.000.000.001.00
..........................................................TTGGCTTTGGCTCTGGCCAC..........................................................2011.000.000.000.001.00
........................CATACATACATACATAAGT.............................................................................................19410.020.000.020.000.00
........................................................CGTTGACTTTGGCTTTGGCT............................................................2011.000.001.000.000.00
.........................................................TTTGGCATTGGCTGTGGC.............................................................1820.500.000.500.000.00
........................................................TTTTGGCTTTGGCTCTGGC.............................................................1911.000.000.000.001.00
1202 scaffold_180764:359600-359700 + 33.47
TTGAACTTACTGT--TTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTAAATTTACTCAAGATAAAAATAAAAAATTCTGCTGTCCATTTCA---------------------------CGTCAAACAGCCT--GATTGTGT--TTATCTTTTATTATTTATGATC-TAACCTTTTGCT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..........TCAAGAGAAAAAAAAAAA.........................................................................................................18140.070.000.000.070.00
...................................................................................................TATGTTTTATAATTTATG................1830.330.000.330.000.00
7884 scaffold_181130:2412854-2412924 - 30.23
TTGAACTTACTGTTTAATAATGTTAAATA-CAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTACGGCAAATATTTGCACTGAGAAATATAAGGTAAATAATTTAAACTAAATTGTGTAAAACA-------------------------------------------------------------ATTTGCT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..........................................TTAAAATAAATTGTGTAA........................................................................1820.500.000.500.000.00
....................TGAGAAATATGTGGTAAA..............................................................................................1811.000.001.000.000.00
..................................GAAATAATTTGAACTAAATT..............................................................................2011.000.000.000.001.00
5330 scaffold_179101:4683-4742 - 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
----ATTTATTGATTAATAATAATGATTATTGAAGTCTAAATAAAGATATATTTGTTATTTCTT-------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...........TATTAATAATAATGAGTA......................................................................................................1820.500.000.500.000.00
....ATTTAGTGATTAAAAATAAT...........................................................................................................2020.500.000.500.000.00
...............AATAATAATGAxGATTGAAGT...............................................................................................2011.001.000.000.000.00
6768 scaffold_180955:2862469-2862527 - 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAACTTAGCAAATAAAAATTATATATATATATATATAGTTGAAGTATTTTTCTTTAC------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..................AATTATATATCTATATAGA..............................................................................................1990.110.000.110.000.00
............................ATATATATATAGTTGAATTAG..................................................................................2120.500.000.500.000.00
.............................TGTATATATAGTAGAAGT....................................................................................1811.000.001.000.000.00
..........................ATATGTATATATAGTAGAAGTAT..................................................................................2311.000.001.000.000.00
..............................GTATATATAGTAGAAGTA...................................................................................1820.500.000.500.000.00
......................ATATATCTATATATATAGTT.........................................................................................20430.020.000.020.000.00
5685 scaffold_180700:675665-675721 - 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACTTAGTTTTTAATAACTTCGAATTTAAAAATTCAATGACAATTATTTCTACT--------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
3482 scaffold_181140:465250-465305 + 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCGAAAATAAAACTACATCGTACAAAATGTACATATATAATTAAAAATGCATTGGC---------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
........................AAATGTGTATATATAATT.........................................................................................1830.330.000.330.000.00
9106 scaffold_181150:147034-147100 - 27.91
TTGAACTTACTGTTTAA--TAATGTTAAATACAGATATATAATTAAAGTT---GCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CCAAATTTGGTATGTAGACTCGTGTGGTATGTAAATATATAGAGTAATTTGGAATTTTGGCCACGCC---------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.......TGGTATGTAGACTCGTGTAGTATGT........................................................................................................2539.330.009.330.000.00
....ATTTGGTATGTAGACTCGTGT...............................................................................................................2129.501.005.003.500.00
.......TGGTATGTAGACTCGTGTAGT............................................................................................................2135.331.003.001.330.00
..AAATTTGGTATGCAGTCTCGT.................................................................................................................21112.003.008.001.000.00
...........ATGTAGACTCGTGTAGTATGT........................................................................................................2134.002.330.670.330.67
......TTGGTATGTAGACTCGTGTAGTAT..........................................................................................................2433.670.003.670.000.00
.CAAATTTGGTATGTAGACTCGTGT...............................................................................................................2424.500.504.000.000.00
......TTGGTATGTAGACTCGTGTAGTATGT........................................................................................................2632.670.002.670.000.00
...AATTTGGTATGTAGACTCGTG................................................................................................................2124.001.002.500.000.50
....ATTTGGTATGCAGTCTCGTGT...............................................................................................................2117.000.001.006.000.00
......TTGGTATGTAGACTCGTGTAGT............................................................................................................2232.000.670.670.670.00
.......TGGTATGTAGACTCGTGTGGT............................................................................................................2116.000.006.000.000.00
.....TTTGGTATGTAGACTCGTGTA..............................................................................................................2132.000.331.330.330.00
.....TTTGGTATGTAGACTCGTGTAGT............................................................................................................2331.670.001.330.330.00
..........TATGTAGACTCGTGTGGTATGTAAA.....................................................................................................2515.000.005.000.000.00
....ATTTGGTATGTAGACTCGTGTAGT............................................................................................................2431.670.001.670.000.00
.......TGGTATGTAGACTCGTGTAGTATG.........................................................................................................2431.670.001.670.000.00
......TTGGTATGTAGACTCGTGTGGT............................................................................................................2215.000.005.000.000.00
....GTTTGGTATGTAGACTCGTGT...............................................................................................................2122.500.000.002.500.00
......TTGGTATGCAGACTCGTGTGGTAT..........................................................................................................2414.000.004.000.000.00
.....TTTGGTATGTAGACTCGTGTAGTA...........................................................................................................2431.330.001.330.000.00
...................................TATATAGAGTTAATTGGAATTTTGGC...........................................................................2614.000.004.000.000.00
......TTGGTATGTAGACTCGTGTAGTATG.........................................................................................................2531.330.001.330.000.00
.......TGGTATGTAGACTCGTGTGGTATGT........................................................................................................2514.001.003.000.000.00
CCAAATTTGGTATGTAGACTCGTGT...............................................................................................................2522.000.002.000.000.00
......TTGGTATGTAGACTCGTGTGGTATGT........................................................................................................2614.000.004.000.000.00
.CAAATTTGGTATGTAGACTCGTGTGG.............................................................................................................2613.000.003.000.000.00
.........GTATGTAGACTCGTGTAGT............................................................................................................1931.001.000.000.000.00
..AAATTTGGTATGTAGACTCGTGTAGT............................................................................................................2631.000.330.330.000.33
..........TATGTAGACTCGTGTAGTATGT........................................................................................................2231.000.001.000.000.00
.....TTTGGTATGTAGACTCGTGTGGTA...........................................................................................................2413.000.003.000.000.00
.....TTTGGTATGCAGTCTCGTGT...............................................................................................................2013.000.002.001.000.00
......TTGGTATGTAGACTCGTGTAGTGT..........................................................................................................2421.500.001.500.000.00
.....TTTGGTATGTAGACTCGTGTGGT............................................................................................................2313.000.003.000.000.00
5894 scaffold_180708:2343863-2343916 - 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGATTTTTGTATTTAATATTAATAAATATATATACAATATTAATATT-----------------------------------------------------------------------------TATTTG
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
TTGATTTTTGTGTTTATTAT...............................................................................................................2022.500.002.500.000.00
.TGATTTTTGTGTTTATTAT...............................................................................................................1931.330.001.330.000.00
TTGATTTTTGTGTTTATTA................................................................................................................1921.000.001.000.000.00
......TTTGTATTTxTTATTAATAAATA......................................................................................................2240.250.000.250.000.00
.....................................ATATTATTATT-----------------------------------------------------------------------------TTTTTG1990.110.000.110.000.00
.........GTAATTAATATTAGTAAA........................................................................................................1820.500.000.500.000.00
.TGATTTTTGTGTTTATTA................................................................................................................1830.330.000.330.000.00
8735 scaffold_181141:4081727-4081779 - 27.64
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTTAATTAA--TTTAATTTTCTTAAATATGAATTTATGTTTAAATTTGTCTTTG----------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
TTTTTATTAA--TTTGATTT...............................................................................................................1890.110.000.110.000.00
............................ATGATTGTATGTTTAAAT.....................................................................................1811.000.001.000.000.00
.............................TGTATTTATGTTTAAGTT....................................................................................1820.500.000.500.000.00
........AA--TTTATTTTTATTAAAT.......................................................................................................1880.130.000.000.000.13
5755 scaffold_180701:2594224-2594277 - 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGATCATACTGTTTTAGGAATTTAACGACGAGTCTAAAAAGAGAATTGTCTTG-----------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head


droVir3 - 41 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1915 scaffold_12963:2382868-2383002 + 44.68
T--------------TGAACTTACTGTTTAATAATGTTAAATACAGATATATAA-------TTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGTACTGGGGGATGCTGAACTTGAACTTGGGCGGGCATAAATACAGATTGATGTATAAGCTTTAATAATACCTCCACTGGAACCTGCCG----CACAGCTTGGCCGTAAAGTGAGTGTATTTAACATTTTATTTTGTTC-------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
5990 scaffold_13047:2772690-2772800 - 43.78
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAGCCTTAAATTTTCATAATGTATGAATAATGTATAAAAT---AATTAGGAAGGCTTTTTGTTGACAGTTAATAAATAAATAAGCTAATAAGTTAGCCTTTGTTTTAATTTAT-----------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
6017 scaffold_13047:4105891-4105997 - 35.66
T--------TGAACTTACTGTTTA----------------------------ATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATTTGAAATGAATTTGCTAGTGATTCTAGATCACATTATCTCTAAATCACATTAATATTAAATAGATAGATAGAATCAGGTTTACTTAAGTTGCGACAAACTTGCT------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
4124 scaffold_12728:373377-373462 - 33.33
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAGAGTTACATTTTATTAATTTT---------TTTTTGATCAAATTATTTTTGATTGGAATTTAACAGTACAAGGTCGCCGCTCGAATTAGCTA------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..................................................TTTGATTGGAATTTAAGC...............................................................1811.000.000.001.000.000.00
.........................................................................GGGTCGCCGCTCGTATTAG.......................................1911.000.000.000.001.000.00
4214 scaffold_12736:83502-83558 - 30.71
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTT---GCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAATC--ACATTTTAATAATGTTTAAAATAAATATAAAATTTATTTTTGAGGCTTGGC---------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
5453 scaffold_12963:14097618-14097679 - 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAAATAATTCTTTAATAATTAGAACCATACATTTATGATTGAT-------------------------------------------------TATTGCCTGTTTTTGAC--------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
2984 scaffold_13050:398283-398348 + 28.18
TTGAACTTACTGTTTAATAATGTTAAATACAGATATA-TAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATGATTT---TGCCTATATATGAGGAGTATAGTATAACTAATAAATGCCGACTTGGTCAAGATATCTTG---------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
................TATATGAGGAGCATAGTAAAACTAATA.........................................................................................27216.0016.000.000.000.000.00
................TATATGAGGAGTAAAGTAAAACTAATA.........................................................................................2729.509.500.000.000.000.00
................TATATGAGGAGTAAAGTAAAACT.............................................................................................2332.671.330.000.001.330.00
................TATATGAGGAGTATAGTAAAACTAATA.........................................................................................2761.171.170.000.000.000.00
................TATATGAGGAGCATAGTAAAACT.............................................................................................2331.000.000.000.001.000.00
................TATATGAGGAGCATAGTAAAACTA............................................................................................2421.001.000.000.000.000.00
..................TGTGAGGAGTATAGTAAAACT.............................................................................................2120.500.500.000.000.000.00
..................TATGAGGAGTATAGTAAAACTAATA.........................................................................................2560.170.170.000.000.000.00
......T---TGCCTATATATGAAGAGTAT......................................................................................................2160.170.170.000.000.000.00
...............ATATATGAGGAGCATAGTAAAACTAATA.........................................................................................2820.500.500.000.000.000.00
...............ATATATGAGGAGCATAGTAAAACTA............................................................................................2520.500.500.000.000.000.00
................TATATGAGGAGTATAGTAAAACTA............................................................................................2470.140.140.000.000.000.00
..................TATGAGGAGTATAGTAAAACTACTAAA.......................................................................................2711.001.000.000.000.000.00
.....................GAGGAGTAAAGTAAAACTAATAAATGCC...................................................................................2840.250.250.000.000.000.00
................TATATGAGGAGTAAAGTAGAACTAAT..........................................................................................2620.500.500.000.000.000.00
................TATATGAGGAGCATAGTAxAACTAATA.........................................................................................2620.500.500.000.000.000.00
..........................GTAAAGTAAAACTAATAAATGCC...................................................................................2350.200.000.000.000.200.00
................TATATGAGGAGTATAGTACAACTAATC.........................................................................................2711.001.000.000.000.000.00
...................................AACTAATAAATGCCGGCT...............................................................................1820.500.000.000.000.000.50
................TATATGAGGAGTATAGTTTAACTTATAAA.......................................................................................2911.001.000.000.000.000.00
....TTT---TGCATATGTATGAGGAGT........................................................................................................2190.110.110.000.000.000.00
......T---TGCCTATATACGAGGAGTAT......................................................................................................2160.170.170.000.000.000.00
................TATATGAGGAGTATAGTACAACTAATA.........................................................................................2720.500.500.000.000.000.00
................TATATGAGGAGTAAAGTAAAACTA............................................................................................2430.330.330.000.000.000.00
................TATATGAGGAGTACAGTAAAACTAA...........................................................................................2520.500.500.000.000.000.00
.TGATTT---TGCCTATATACGAG............................................................................................................2040.250.250.000.000.000.00
..................TATGAGGAGCATAGTAGAACTAATAAA.......................................................................................2720.500.500.000.000.000.00
.....................GAGGAGTATAGTGAAACTAATAA........................................................................................2330.330.330.000.000.000.00
................TATATGAGGAGTATAGTAAAACTAAT..........................................................................................2670.140.140.000.000.000.00
................TATATGAGGAGCATAGTAAAACTAATAAA.......................................................................................2920.500.500.000.000.000.00
................TATATGAGGAGTAAAGTAAAACTAA...........................................................................................2530.330.330.000.000.000.00
2015 scaffold_12963:15522771-15522821 + 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATA---TATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAGAACTTACTGTTTAATGCTGTTAGAGTGAGAGACAGTACATTTTAAATT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
792 scaffold_12822:3944488-3944545 + 27.91
TTGAACTTACTGTTT-AATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GTCAAGTTGTTGCTTTGTTGCTGCCAAATCCAGACTTTTAATTAAAACAAACTGGGCT--------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
2955 scaffold_13049:25057311-25057363 + 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T-------------TAAAATTGTTAAAATCTCACTTTCGTTTTAAGCTGCCTAGGTCACGGCTTGC-----------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
845 scaffold_12853:5731-5776 + 25.8
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAGTTTATTGAATAATAAAGTTAAATATAG-TGTCTATTCAAAAT------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
.....................GTTAAATAGAG-TTTCTAT...........................................................................................1812.002.000.000.000.000.00
3845 scaffold_12100:8248-8291 - 25.58
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T------------TTAGTAATGACAAAAATAAATTTAAAAAAAAAGTTCCCTTGGC---------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
.............................TAAATTTAGAAAAGAAGTTCCCT...............................................................................2311.001.000.000.000.000.00
159 scaffold_9720:603-651 + 25.57
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACATTCAATTTTAGGACCTAAGACACAGATA---AATTAAAAATGCCT-------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
2704 scaffold_13047:9805715-9805755 + 24.22
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
---AATTTGTTGCAT-ATAATATTACATATACATATATAATTAAA--------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
1029 scaffold_12875:2037274-2037327 + 24.03
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TCGAACACGCACTGTATTAGTGTAAAGCCAAGGAAATCAATTAAAATTGTTTAG-----------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
4254 scaffold_12736:488406-488449 - 23.73
TTGAACTTACTGT-TTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTTAATTTGCTATATTAATAAAG-AAAATACA-ATAAATAGGAAAA--------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
1972 scaffold_12963:10810924-10810978 + 23.26
TTGAACTTACTGTTTAATAAT--GTTAA-----------ATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTAAACTTA------AATAATCTATTAATTGTTGCCATTATATTATGCTATAATAAAAGCT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
6668 scaffold_13052:868639-868680 - 22.48
TTG-AACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CAACAACCTACTTTTATATAATATATAATATATATATATAAT------------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
998 scaffold_12855:9463937-9463983 + 21.71
TTGAAC----TTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGTAAGCTCTTAAATATTTCAAATGTTATATATTATTATATTAATA----------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
4043 scaffold_12723:4605800-4605851 - 20.16
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTTTACAAGCTCTTTAATTATGTTAA------------------GTTTGCATTTTCAACAATTTGTTTGC-------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
2780 scaffold_13049:1054246-1054276 + 20.16
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T------------TTAATAACATTAAATATAAATATTTAATTA----------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head


droMoj3 - 55 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
7391 scaffold_6680:16275074-16275209 - 49.85
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTA-TGGCTGCGAT-------TGAGCTATGATCTGCATTTAATTATGG--TCCCCGCCATATTCC
----ACTTGTCTGTAAATGATGTTAAATCAGAACACAAAATTAAAATTGAATT-GTTGCATTTTGTGGCAGCAATCATATTGACTGCGAGTTGATTTGAAGCTGAAATTTCCATTTTACTTTAAATGCTTTACTGTATCAA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
5022 scaffold_6441:75176-75302 - 49.61
TTGAACTTACTGTTTAATAATGTT-------------AAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAAATCTCAAAGTTTCATGAAGATCGTACGTCCACAAAAAAAGTTATTAAGCATTTAAGTTCTCTTAGTAAGCGCTCACTGCCGCCCATGCGTGTTTATGCTTGTGTGTGTATGTGTATGTAAATGT-----------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.......AAAAGTTTCATGAAGATCGTA....................................................................................................................21310.260.260.000.000.00
............................................................TCTCATAGTAAGCGCTCACTGCCGC...........................................................2532.671.330.000.001.33
............................................................TCTCATAGTAAGCGCTCACTGCCGCC..........................................................2632.331.000.000.001.33
............................................................TCTCATAGTAAGCGCTCACTGCCGCCC.........................................................2731.670.000.000.001.67
.........AAGTTTCATGAAGATCGTACG..................................................................................................................21190.260.210.050.000.00
......TGAAAGTTTCATGAAGATCGTACGTCC...............................................................................................................27140.290.210.000.000.07
............................................................TCTCATAGTAAGCGCTCACTGCCG............................................................2441.000.500.250.000.25
......TAAAAGTTTCATGAAGATCGTACGT.................................................................................................................25100.300.300.000.000.00
......TAAAAGTTTCATGAAGATCGT.....................................................................................................................21300.100.100.000.000.00
............................................................TCTCATAGTAAGCGCACACTGCCGCC..........................................................26130.230.000.000.000.23
6421 scaffold_6500:30245826-30245954 - 45.99
TTGAACTTACTGTTT----A--ATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACAAACTCGTAAAATGTAAAGTAAAGTGTAAAATATTGATATGAACTATAAATAGTTCTAGCGCTAATATGCATATGCATTTGCACATATGTA-TGTATTCATTACATAGATTTAAACAATATCTTTTA-------T
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
........GTAAAAGGGAAAGTAAAGT..............................................................................................................1911.001.000.000.000.00
2299 scaffold_6500:9419304-9419448 + 45.08
TTGAACTTACTGTTTAATAATG---TTAAATACA---GATATATAATTAAAGTTGCCTTGGCTAC-----GACTTGCTGGCTCGTCGGTATGGCTG-CGATTGAGCTATGATCTGCATTTAATTATGGTCCCCG---CCATATTCC
TTAAAAAAAATAAAAACAAATGTATTTAAATATAAAAAATATAAAAATAAAATTACTTTAAAAGTAATATAATATATCTATATAAAGTCAAAATTGTTGATTGAATT-TGAATTGAATTGAATTACATTTTTTGACTCTATATTTA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.......................................................................................................TATT-TGAATTGGATTGAATT......................2011.001.000.000.000.00
3019 scaffold_6540:2031386-2031482 + 37.21
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTA-----------AAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
AAA---ATACATTTTAAGGATACTATGTATACTCGTTCAGTTTCGTTTCAGCATGAGTTG--------------------------GGGATGGTT--GAATGATTTTCGATTTGTATGGCATTATAG---------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...........................................CGTTTCAGCGTGxGTTG--------------------------GG......................................................1811.000.000.001.000.00
1225 scaffold_6428:2048-2128 + 35.66
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATAGCGCAATGGTATATTTTCTTAAATAAATATGAAATGTACAAGTCACTTATGCAAATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
..............................................TCACTTATTTAAATGGATGCTGGC.............................................................2441.000.000.000.001.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGT.....................................................2550.800.200.000.000.60
..............................................TCACTTATGTAAATGGATGCTGGC.............................................................2441.000.500.000.000.50
...................................................TATGTAAATGTATGCTGGCTCGCTGG......................................................2650.600.000.000.000.60
.....................................................TGTAAATGTATGCTGGCTCGCTGG......................................................2450.600.000.000.000.60
................................................ACTTATGTAAATGTATGCTGGCTCG..........................................................2550.600.000.000.000.60
......................................................TTAAATGGATGCTGGCTCGCTGG......................................................2340.750.250.000.000.50
.......................................................TAAATGGATGCTGGCTCGCTGGT.....................................................2340.500.250.000.000.25
......................................TGTACACGTCACTTATGTAAATG......................................................................2350.400.000.000.000.40
........................................TACAAGTCACTTATTTAAATGGATGC.................................................................2640.500.000.000.000.50
..............................................TCACTTATGAAAATGTATGCTGGC.............................................................2430.670.000.000.000.67
..................................................TTATGTAAATGTATGCTGGC.............................................................2050.400.000.000.000.40
..................................................TTATGTAAATGTATGCTGGCTCGCTGG......................................................2750.400.000.000.000.40
......................................................TTAAATGGATGCTGGCTCGCTGGTT....................................................2540.500.500.000.000.00
..................................................TTATGTAAATGTATGCTGGCTCGCTG.......................................................2650.400.000.000.000.40
..................................................TTATGTAAATGGATGCTGGCTCG..........................................................2340.250.000.000.000.25
..............................................TCACTTATGTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
...............................TATGAAATGTACATGTCACT................................................................................2050.200.200.000.000.00
...................................................TATGTAAATGTATGCTGGCTCGCTG.......................................................2550.200.000.000.000.20
..................................................TTATGAAAATGTATGCTGGCTCGC.........................................................2430.330.000.000.000.33
..................................................TTATGTAAATGTATGCTGGCTCGCT........................................................2550.200.200.000.000.00
........................................TACACGTCACTTATGTAAATG......................................................................2150.200.000.000.000.20
..............................................TCACTTATTTAAATGGATGCTGGCTCG..........................................................2740.250.250.000.000.00
.................................TGAAATGTACACGTCACTTATGTA..........................................................................2450.200.200.000.000.00
...................................................TATGAAAATGTATGCTGGCTCGCTGG......................................................2630.330.000.000.000.33
...............................TATGAAATGTACACGTCACTTATGTA..........................................................................2650.200.200.000.000.00
............................................AGTCACTTATTTAAATGGATGCTGG..............................................................2540.250.250.000.000.00
............................................AGTCACTTATGTAAATGGATGCTGGC.............................................................2640.250.000.000.000.25
..TAGCGCAGTGGTATATTTTCTTAAATAAA....................................................................................................2950.200.200.000.000.00
.......................................................TAAATGTATGCTGGCTCGCTGG......................................................2250.200.000.000.000.20
......................................................TTAAATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2740.250.250.000.000.00
...................................................TATTTAAATGGATGCTGGCTCGCTGG......................................................2640.250.250.000.000.00
..................................................TTATGCAAATGGATGCTGGCTCGCTGG......................................................2730.330.330.000.000.00
..................................................TTATTTAAATGGATGCTGGCTCGCTGG......................................................2740.250.250.000.000.00
.......................................................TAAATGTATGCTGGCTCGCTGGTT....................................................2450.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGTTT...................................................2640.250.250.000.000.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGTT....................................................2650.200.200.000.000.00
..............................................TCACTTATTTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
TATAGCGCAGTGGTATATTTTCTTAA.........................................................................................................2650.200.200.000.000.00
.........................................................AATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2440.250.000.000.000.25
.....................................................TTTAAATGGATGCTGGCTCGCTGGTT....................................................2640.250.250.000.000.00
......................................TGTACACGTCACTTATGT...........................................................................1850.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGC.........................................................2450.200.000.000.000.20
......................................TGTACAAGTCACTTATTTAAATGGA....................................................................2540.250.250.000.000.00
........................................TACACGTCACTTATGAAAATG......................................................................2140.250.000.000.000.25
..................................................TTATGTAAATGTATGCTGGCTCG..........................................................2350.200.200.000.000.00
..................................................TTATGTAAATGGATGCTGGCTCGCTC.......................................................2640.250.250.000.000.00
...........................TAAATATGAAATGTACACGTCACTTA..............................................................................2650.200.200.000.000.00
...................................................CACGCAAATGGATGCTGG..............................................................1811.000.001.000.000.00
................................................ACTTATGTAAATGGATGCTGGCTC...........................................................2440.250.250.000.000.00
.......CAATGGTATATCTACTTAA.........................................................................................................1940.250.000.000.250.00
......................................................GCAAATGTATGCTGGCTCGCTTGT.....................................................2411.000.000.000.001.00
......................................................GTAAATGTATGCTGGCTCGCTGGT.....................................................2450.200.000.000.000.20
..............................................TCACTTATGTAAATGTATGCTGGCT............................................................2550.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGT.....................................................2440.250.250.000.000.00
..................................................TTATGTAAATGTATGCTGG..............................................................1950.200.000.000.000.20
....................................................ATGTAAATGTATGCTGGCTCGCTGG......................................................2550.200.000.000.000.20
..............................................TCACTTATTTAAATGGATGCTGGCTC...........................................................2640.250.000.000.000.25
390 scaffold_3387:2263-2343 + 34.88
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATAGCGCAGTGGTATATTTTCTTAAATAAATATGAAATGTACAAGTCACTTATGTAAATGGGTGCTGGCTCGCTGGTTTG--------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
..............................................TCACTTATTTAAATGGATGCTGGC.............................................................2441.000.000.000.001.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGT.....................................................2550.800.200.000.000.60
..............................................TCACTTATGTAAATGGATGCTGGC.............................................................2441.000.500.000.000.50
...................................................TATGTAAATGTATGCTGGCTCGCTGG......................................................2650.600.000.000.000.60
.....................................................TGTAAATGTATGCTGGCTCGCTGG......................................................2450.600.000.000.000.60
................................................ACTTATGTAAATGTATGCTGGCTCG..........................................................2550.600.000.000.000.60
......................................................TTAAATGGATGCTGGCTCGCTGG......................................................2340.750.250.000.000.50
.......................................................TAAATGGATGCTGGCTCGCTGGT.....................................................2340.500.250.000.000.25
......................................TGTACACGTCACTTATGTAAATG......................................................................2350.400.000.000.000.40
........................................TACAAGTCACTTATTTAAATGGATGC.................................................................2640.500.000.000.000.50
...................................................TATGTAAATGTTTGCTGGCTCGCTGG......................................................2630.670.330.000.000.33
..................................................TTATGTAAATGTATGCTGGC.............................................................2050.400.000.000.000.40
..................................................TTATGTAAATGTATGCTGGCTCGCTGG......................................................2750.400.000.000.000.40
..................................................TTATGTAAATGTTTGCTGGCTCGCTGG......................................................2730.670.000.000.000.67
......................................................TTAAATGGATGCTGGCTCGCTGGTT....................................................2540.500.500.000.000.00
..................................................TTATGTAAATGTATGCTGGCTCGCTG.......................................................2650.400.000.000.000.40
..................................................TTATGTAAATGGATGCTGGCTCG..........................................................2340.250.000.000.000.25
..............................................TCACTTATGTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
...............................TATGAAATGTACATGTCACT................................................................................2050.200.200.000.000.00
...................................................TATGTAAATGTATGCTGGCTCGCTG.......................................................2550.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGCT........................................................2550.200.200.000.000.00
........................................TACACGTCACTTATGTAAATG......................................................................2150.200.000.000.000.20
..............................................TCACTTATTTAAATGGATGCTGGCTCG..........................................................2740.250.250.000.000.00
.................................TGAAATGTACACGTCACTTATGTA..........................................................................2450.200.200.000.000.00
...............................TATGAAATGTACACGTCACTTATGTA..........................................................................2650.200.200.000.000.00
............................................AGTCACTTATTTAAATGGATGCTGG..............................................................2540.250.250.000.000.00
..TAGCGCAGTGGTATATTTTCTTAAATAAA....................................................................................................2950.200.200.000.000.00
............................................AGTCACTTATGTAAATGGATGCTGGC.............................................................2640.250.000.000.000.25
.......................................................TAAATGTATGCTGGCTCGCTGG......................................................2250.200.000.000.000.20
......................................................TTAAATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2740.250.250.000.000.00
...................................................TATTTAAATGGATGCTGGCTCGCTGG......................................................2640.250.250.000.000.00
..................................................TTATTTAAATGGATGCTGGCTCGCTGG......................................................2740.250.250.000.000.00
......................................TGTACACGTCACTTATGTAGATG......................................................................2330.330.000.000.000.33
.......................................................TAAATGTATGCTGGCTCGCTGGTT....................................................2450.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGTTT...................................................2640.250.250.000.000.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGTT....................................................2650.200.200.000.000.00
..............................................TCACTTATTTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
.....................................................TGTAAATGTTTGCTGGCTCGCTGG......................................................2430.330.000.000.000.33
TATAGCGCAGTGGTATATTTTCTTAA.........................................................................................................2650.200.200.000.000.00
.........................................................AATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2440.250.000.000.000.25
.....................................................TTTAAATGGATGCTGGCTCGCTGGTT....................................................2640.250.250.000.000.00
..................................................TTATGTAAATGTTTGCTGGCTCG..........................................................2330.330.000.000.000.33
......................................TGTACACGTCACTTATGT...........................................................................1850.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGC.........................................................2450.200.000.000.000.20
......................................TGTACAAGTCACTTATTTAAATGGA....................................................................2540.250.250.000.000.00
........................................TACACGTCACTTATGAAAATG......................................................................2140.250.000.000.000.25
..................................................TTATGTAAATGTATGCTGGCTCG..........................................................2350.200.200.000.000.00
..................................................TTATGTAAATGGATGCTGGCTCGCTC.......................................................2640.250.250.000.000.00
..................................................TTATGTAAATGTTTGCTGGCTCGCT........................................................2530.330.330.000.000.00
...........................TAAATATGAAATGTACACGTCACTTA..............................................................................2650.200.200.000.000.00
................................................ACTTATGTAAATGGATGCTGGCTC...........................................................2440.250.250.000.000.00
......................................................GTAAATGTATGCTGGCTCGCTGGT.....................................................2450.200.000.000.000.20
..............................................TCACTTATGTAAATGTATGCTGGCT............................................................2550.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGT.....................................................2440.250.250.000.000.00
..................................................TTATGTAAATGTATGCTGG..............................................................1950.200.000.000.000.20
....................................................ATGTAAATGTATGCTGGCTCGCTGG......................................................2550.200.000.000.000.20
..............................................TCACTTATTTAAATGGATGCTGGCTC...........................................................2640.250.000.000.000.25
367 scaffold_3154:20-100 + 34.88
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATAGCGCAATGGTATATTTTCTTAAATAAATATGAAATGTACACGTCACTTAGGTAAAAGTATGCTGGCTCGCTGGTTTG--------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
........................................TACACGTCACTTATGTAAATGTATGC.................................................................2633.670.670.000.003.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGT.....................................................2550.800.200.000.000.60
......................................TGTACACGTCACTTATGTAAATGTA....................................................................2531.000.000.000.001.00
...................................................TATGTAAATGTATGCTGGCTCGCTGG......................................................2650.600.000.000.000.60
.....................................................TGTAAATGTATGCTGGCTCGCTGG......................................................2450.600.000.000.000.60
................................................ACTTATGTAAATGTATGCTGGCTCG..........................................................2550.600.000.000.000.60
..................................................TTATGTAAATGTATGCTGGCTCGCTGG......................................................2750.400.000.000.000.40
......................................TGTACACGTCACTTATGTAAATG......................................................................2350.400.000.000.000.40
........................................TACACGTCACTTATGTAAATGTATG..................................................................2530.670.000.000.000.67
..................................................TTATGTAAATGTATGCTGGC.............................................................2050.400.000.000.000.40
......................................TGTACACGTCACTTATGTAAATGTATG..................................................................2730.670.000.000.000.67
..................................................TTATGTAAATGTATGCTGGCTCGCTG.......................................................2650.400.000.000.000.40
...............................TATGAAATGTACATGTCACT................................................................................2050.200.200.000.000.00
...................................................TATGTAAATGTATGCTGGCTCGCTG.......................................................2550.200.000.000.000.20
......................................TGTACACGTCACTTATGT...........................................................................1850.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGC.........................................................2450.200.000.000.000.20
........................................TACACGTCACTTATGTAAATG......................................................................2150.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGCT........................................................2550.200.200.000.000.00
..................................................TTATGTAAATGTATGCTGGCTCG..........................................................2350.200.200.000.000.00
............................................CGTCACTTATGTAAATGTATGCTGGC.............................................................2630.330.000.000.000.33
.................................TGAAATGTACACGTCACTTATGTA..........................................................................2450.200.200.000.000.00
...........................TAAATATGAAATGTACACGTCACTTA..............................................................................2650.200.200.000.000.00
............................................CGTCACTTATGTAAATGTATGCTGG..............................................................2530.330.000.000.000.33
...............................TATGAAATGTACACGTCACTTATGTA..........................................................................2650.200.200.000.000.00
..TAGCGCAGTGGTATATTTTCTTAAATAAA....................................................................................................2950.200.200.000.000.00
.......................................................TAAATGTATGCTGGCTCGCTGG......................................................2250.200.000.000.000.20
.......CAATGGTATATCTACTTAA.........................................................................................................1940.250.000.000.250.00
......................................................GTAAATGTATGCTGGCTCGCTGGT.....................................................2450.200.000.000.000.20
..............................................TCACTTATGTAAATGTATGCTGGCT............................................................2550.200.200.000.000.00
..................................................TTATGTAAATGTATGCTGG..............................................................1950.200.000.000.000.20
.......................................................TAAATGTATGCTGGCTCGCTGGTT....................................................2450.200.200.000.000.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGTT....................................................2650.200.200.000.000.00
....................................................ATGTAAATGTATGCTGGCTCGCTGG......................................................2550.200.000.000.000.20
TATAGCGCAGTGGTATATTTTCTTAA.........................................................................................................2650.200.200.000.000.00
4154 scaffold_3189:2286-2366 - 34.88
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATAGCGCAATGGTATATTTTCTTAAATAAATATGAAATGTACAAGTCACTTATGTAAATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
........................................TACACGTCACTTATGTAAATGTATGC.................................................................2633.670.670.000.003.00
........................................TACAAGTCACGTATTTAAATGGATGC.................................................................2624.500.000.000.004.50
..............................................TCACTTATTTAAATGGATGCTGGC.............................................................2441.000.000.000.001.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGT.....................................................2550.800.200.000.000.60
..............................................TCACTTATGTAAATGGATGCTGGC.............................................................2441.000.500.000.000.50
...................................................TATGTAAATGTATGCTGGCTCGCTGG......................................................2650.600.000.000.000.60
..............................................TCACTTATGTAGATGTATGCTGGC.............................................................2421.500.000.000.001.50
.....................................................TGTAAATGTATGCTGGCTCGCTGG......................................................2450.600.000.000.000.60
......................................TGTACACGTCACTTATGTAAATGTA....................................................................2531.000.000.000.001.00
................................................ACTTATGTAAATGTATGCTGGCTCG..........................................................2550.600.000.000.000.60
......................................................TTAAATGGATGCTGGCTCGCTGG......................................................2340.750.250.000.000.50
.......................................................TAAATGGATGCTGGCTCGCTGGT.....................................................2340.500.250.000.000.25
......................................................TTAAATGGATGCTGGCTCGCTGGTC....................................................2521.001.000.000.000.00
......................................TGTACACGTCACTTATGTAAATG......................................................................2350.400.000.000.000.40
........................................TACAAGTCACTTATTTAAATGGATGC.................................................................2640.500.000.000.000.50
..............................................TCACTTATGAAAATGTATGCTGGC.............................................................2430.670.000.000.000.67
...................................................TATGTAAATGTTTGCTGGCTCGCTGG......................................................2630.670.330.000.000.33
........................................TACACGTCACTTATGTAAATGTATG..................................................................2530.670.000.000.000.67
..................................................TTATGTAAATGTATGCTGGC.............................................................2050.400.000.000.000.40
..................................................TTATGTAAATGTATGCTGGCTCGCTGG......................................................2750.400.000.000.000.40
..................................................TTATGTAAATGTTTGCTGGCTCGCTGG......................................................2730.670.000.000.000.67
......................................................TTAAATGGATGCTGGCTCGCTGGTT....................................................2540.500.500.000.000.00
......................................TGTACACGTCACTTATGTAAATGTATG..................................................................2730.670.000.000.000.67
..............................................TCACTTATGTAGATGTATGCTGGCTC...........................................................2621.000.000.000.001.00
..................................................TTATGTAAATGTATGCTGGCTCGCTG.......................................................2650.400.000.000.000.40
..................................................TTATGTAAATGGATGCTGGCTCG..........................................................2340.250.000.000.000.25
..............................................TCACTTATGTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
...............................TATGAAATGTACATGTCACT................................................................................2050.200.200.000.000.00
...................................................TATGTAAATGTATGCTGGCTCGCTG.......................................................2550.200.000.000.000.20
..................................................TTATGAAAATGTATGCTGGCTCGC.........................................................2430.330.000.000.000.33
........................................TACACGTCACTTATGTAAATG......................................................................2150.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGCT........................................................2550.200.200.000.000.00
..............................................TCACTTATTTAAATGGATGCTGGCTCG..........................................................2740.250.250.000.000.00
............................................CGTCACTTATGTAAATGTATGCTGGC.............................................................2630.330.000.000.000.33
.................................TGAAATGTACACGTCACTTATGTA..........................................................................2450.200.200.000.000.00
.....................................................TGTAAATGTATGCTGGCTCGCTAG......................................................2420.500.000.000.000.50
............................................CGTCACTTATGTAAATGTATGCTGG..............................................................2530.330.000.000.000.33
...................................................TATGAAAATGTATGCTGGCTCGCTGG......................................................2630.330.000.000.000.33
...............................TATGAAATGTACACGTCACTTATGTA..........................................................................2650.200.200.000.000.00
............................................AGTCACTTATTTAAATGGATGCTGG..............................................................2540.250.250.000.000.00
............................................AGTCACTTATGTAAATGGATGCTGGC.............................................................2640.250.000.000.000.25
..TAGCGCAGTGGTATATTTTCTTAAATAAA....................................................................................................2950.200.200.000.000.00
.......................................................TAAATGTATGCTGGCTCGCTGG......................................................2250.200.000.000.000.20
......................................................TTAAATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2740.250.250.000.000.00
...................................................TATTTAAATGGATGCTGGCTCGCTGG......................................................2640.250.250.000.000.00
..................................................TTATGCAAATGGATGCTGGCTCGCTGG......................................................2730.330.330.000.000.00
..................................................TTATTTAAATGGATGCTGGCTCGCTGG......................................................2740.250.250.000.000.00
......................................TGTACACGTCACTTATGTAGATG......................................................................2330.330.000.000.000.33
.......................................................TAAATGTATGCTGGCTCGCTGGTT....................................................2450.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGTTT...................................................2640.250.250.000.000.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGTT....................................................2650.200.200.000.000.00
..............................................TCACTTATTTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
.....................................................TGTAAATGTTTGCTGGCTCGCTGG......................................................2430.330.000.000.000.33
TATAGCGCAGTGGTATATTTTCTTAA.........................................................................................................2650.200.200.000.000.00
.........................................................AATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2440.250.000.000.000.25
.....................................................TTTAAATGGATGCTGGCTCGCTGGTT....................................................2640.250.250.000.000.00
..................................................TTATGTAAATGTTTGCTGGCTCG..........................................................2330.330.000.000.000.33
........................................TACAAGTCACGTATTTAAATGGATG..................................................................2520.500.500.000.000.00
......................................TGTACACGTCACTTATGT...........................................................................1850.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGC.........................................................2450.200.000.000.000.20
......................................TGTACAAGTCACTTATTTAAATGGA....................................................................2540.250.250.000.000.00
........................................TACACGTCACTTATGAAAATG......................................................................2140.250.000.000.000.25
..................................................TTATGTAAATGTATGCTGGCTCG..........................................................2350.200.200.000.000.00
..................................................TTATGTAAATGGATGCTGGCTCGCTC.......................................................2640.250.250.000.000.00
..................................................TTATGTAAATGTTTGCTGGCTCGCT........................................................2530.330.330.000.000.00
...........................TAAATATGAAATGTACACGTCACTTA..............................................................................2650.200.200.000.000.00
..................................................TTATGTAAATGTATGCTGGCTCGCTA.......................................................2620.500.000.000.000.50
.....................................................TGTAGATGTATGCTGGCTCGCTGGT.....................................................2520.500.500.000.000.00
................................................ACTTATGTAAATGGATGCTGGCTC...........................................................2440.250.250.000.000.00
.......CAATGGTATATCTACTTAA.........................................................................................................1940.250.000.000.250.00
......................................................GTAAATGTATGCTGGCTCGCTGGT.....................................................2450.200.000.000.000.20
..............................................TCACTTATGTAAATGTATGCTGGCT............................................................2550.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGT.....................................................2440.250.250.000.000.00
..................................................TTATGTAAATGTATGCTGG..............................................................1950.200.000.000.000.20
....................................................ATGTAAATGTATGCTGGCTCGCTGG......................................................2550.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGCTTG......................................................2720.500.000.000.000.50
......................................TGTACAAGTCACGTATTTAAATGGATGC.................................................................2820.500.000.000.000.50
..................................................TTATGTAAATGTATGCTGGCTCCCTG.......................................................2620.500.000.000.000.50
..............................................TCACTTATTTAAATGGATGCTGGCTC...........................................................2640.250.000.000.000.25
4059 scaffold_2148:658-738 - 34.88
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TATAGCGCAATGGTATATTTTCTTAAATAAATATGAAATGTACAAGTCACTTATGTAAATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
........................................TACACGTCACTTATGTAAATGTATGC.................................................................2633.670.670.000.003.00
........................................TACAAGTCACGTATTTAAATGGATGC.................................................................2624.500.000.000.004.50
..............................................TCACTTATTTAAATGGATGCTGGC.............................................................2441.000.000.000.001.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGT.....................................................2550.800.200.000.000.60
..............................................TCACTTATGTAAATGGATGCTGGC.............................................................2441.000.500.000.000.50
...................................................TATGTAAATGTATGCTGGCTCGCTGG......................................................2650.600.000.000.000.60
..............................................TCACTTATGTAGATGTATGCTGGC.............................................................2421.500.000.000.001.50
.....................................................TGTAAATGTATGCTGGCTCGCTGG......................................................2450.600.000.000.000.60
......................................TGTACACGTCACTTATGTAAATGTA....................................................................2531.000.000.000.001.00
................................................ACTTATGTAAATGTATGCTGGCTCG..........................................................2550.600.000.000.000.60
......................................................TTAAATGGATGCTGGCTCGCTGG......................................................2340.750.250.000.000.50
.......................................................TAAATGGATGCTGGCTCGCTGGT.....................................................2340.500.250.000.000.25
......................................................TTAAATGGATGCTGGCTCGCTGGTC....................................................2521.001.000.000.000.00
......................................TGTACACGTCACTTATGTAAATG......................................................................2350.400.000.000.000.40
........................................TACAAGTCACTTATTTAAATGGATGC.................................................................2640.500.000.000.000.50
..............................................TCACTTATGAAAATGTATGCTGGC.............................................................2430.670.000.000.000.67
...................................................TATGTAAATGTTTGCTGGCTCGCTGG......................................................2630.670.330.000.000.33
........................................TACACGTCACTTATGTAAATGTATG..................................................................2530.670.000.000.000.67
..................................................TTATGTAAATGTATGCTGGC.............................................................2050.400.000.000.000.40
..................................................TTATGTAAATGTATGCTGGCTCGCTGG......................................................2750.400.000.000.000.40
..................................................TTATGTAAATGTTTGCTGGCTCGCTGG......................................................2730.670.000.000.000.67
......................................................TTAAATGGATGCTGGCTCGCTGGTT....................................................2540.500.500.000.000.00
......................................TGTACACGTCACTTATGTAAATGTATG..................................................................2730.670.000.000.000.67
..............................................TCACTTATGTAGATGTATGCTGGCTC...........................................................2621.000.000.000.001.00
..................................................TTATGTAAATGTATGCTGGCTCGCTG.......................................................2650.400.000.000.000.40
..................................................TTATGTAAATGGATGCTGGCTCG..........................................................2340.250.000.000.000.25
..............................................TCACTTATGTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
...............................TATGAAATGTACATGTCACT................................................................................2050.200.200.000.000.00
...................................................TATGTAAATGTATGCTGGCTCGCTG.......................................................2550.200.000.000.000.20
..................................................TTATGAAAATGTATGCTGGCTCGC.........................................................2430.330.000.000.000.33
........................................TACACGTCACTTATGTAAATG......................................................................2150.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGCT........................................................2550.200.200.000.000.00
..............................................TCACTTATTTAAATGGATGCTGGCTCG..........................................................2740.250.250.000.000.00
............................................CGTCACTTATGTAAATGTATGCTGGC.............................................................2630.330.000.000.000.33
.................................TGAAATGTACACGTCACTTATGTA..........................................................................2450.200.200.000.000.00
.....................................................TGTAAATGTATGCTGGCTCGCTAG......................................................2420.500.000.000.000.50
............................................CGTCACTTATGTAAATGTATGCTGG..............................................................2530.330.000.000.000.33
...................................................TATGAAAATGTATGCTGGCTCGCTGG......................................................2630.330.000.000.000.33
...............................TATGAAATGTACACGTCACTTATGTA..........................................................................2650.200.200.000.000.00
............................................AGTCACTTATTTAAATGGATGCTGG..............................................................2540.250.250.000.000.00
............................................AGTCACTTATGTAAATGGATGCTGGC.............................................................2640.250.000.000.000.25
..TAGCGCAGTGGTATATTTTCTTAAATAAA....................................................................................................2950.200.200.000.000.00
.......................................................TAAATGTATGCTGGCTCGCTGG......................................................2250.200.000.000.000.20
......................................................TTAAATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2740.250.250.000.000.00
...................................................TATTTAAATGGATGCTGGCTCGCTGG......................................................2640.250.250.000.000.00
..................................................TTATGCAAATGGATGCTGGCTCGCTGG......................................................2730.330.330.000.000.00
..................................................TTATTTAAATGGATGCTGGCTCGCTGG......................................................2740.250.250.000.000.00
......................................TGTACACGTCACTTATGTAGATG......................................................................2330.330.000.000.000.33
.......................................................TAAATGTATGCTGGCTCGCTGGTT....................................................2450.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGTTT...................................................2640.250.250.000.000.00
.....................................................TGTAAATGTATGCTGGCTCGCTGGTT....................................................2650.200.200.000.000.00
..............................................TCACTTATTTAAATGGATGCTGGCTCGC.........................................................2840.250.250.000.000.00
.....................................................TGTAAATGTTTGCTGGCTCGCTGG......................................................2430.330.000.000.000.33
TATAGCGCAGTGGTATATTTTCTTAA.........................................................................................................2650.200.200.000.000.00
.........................................................AATGGATGCTGGCTCGCTGGTTTG--------------------------------------------------2440.250.000.000.000.25
.....................................................TTTAAATGGATGCTGGCTCGCTGGTT....................................................2640.250.250.000.000.00
..................................................TTATGTAAATGTTTGCTGGCTCG..........................................................2330.330.000.000.000.33
........................................TACAAGTCACGTATTTAAATGGATG..................................................................2520.500.500.000.000.00
......................................TGTACACGTCACTTATGT...........................................................................1850.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGC.........................................................2450.200.000.000.000.20
......................................TGTACAAGTCACTTATTTAAATGGA....................................................................2540.250.250.000.000.00
........................................TACACGTCACTTATGAAAATG......................................................................2140.250.000.000.000.25
..................................................TTATGTAAATGTATGCTGGCTCG..........................................................2350.200.200.000.000.00
..................................................TTATGTAAATGGATGCTGGCTCGCTC.......................................................2640.250.250.000.000.00
..................................................TTATGTAAATGTTTGCTGGCTCGCT........................................................2530.330.330.000.000.00
...........................TAAATATGAAATGTACACGTCACTTA..............................................................................2650.200.200.000.000.00
..................................................TTATGTAAATGTATGCTGGCTCGCTA.......................................................2620.500.000.000.000.50
.....................................................TGTAGATGTATGCTGGCTCGCTGGT.....................................................2520.500.500.000.000.00
................................................ACTTATGTAAATGGATGCTGGCTC...........................................................2440.250.250.000.000.00
.......CAATGGTATATCTACTTAA.........................................................................................................1940.250.000.000.250.00
......................................................GTAAATGTATGCTGGCTCGCTGGT.....................................................2450.200.000.000.000.20
..............................................TCACTTATGTAAATGTATGCTGGCT............................................................2550.200.200.000.000.00
......................................................TTAAATGGATGCTGGCTCGCTGGT.....................................................2440.250.250.000.000.00
..................................................TTATGTAAATGTATGCTGG..............................................................1950.200.000.000.000.20
....................................................ATGTAAATGTATGCTGGCTCGCTGG......................................................2550.200.000.000.000.20
..................................................TTATGTAAATGTATGCTGGCTCGCTTG......................................................2720.500.000.000.000.50
......................................TGTACAAGTCACGTATTTAAATGGATGC.................................................................2820.500.000.000.000.50
..................................................TTATGTAAATGTATGCTGGCTCCCTG.......................................................2620.500.000.000.000.50
..............................................TCACTTATTTAAATGGATGCTGGCTC...........................................................2640.250.000.000.000.25
2313 scaffold_6500:10927923-10927986 + 32.56
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
C---------TGTTTACATATATATCATACATACATATATTTTCAGTTTCGTTGGCTGCGCTTCGCCCACTTG----------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
5187 scaffold_6473:7154341-7154406 - 31.01
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAACTTACAATTAATAAATAATTAGTACACAAGTAATTTTAATTTAGCTAAAGCTGCAATGTGC-----------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
1616 scaffold_6482:2218374-2218456 + 29.8
TTGAACTTACTG---------------TTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TAAAAATTATAATCGTTACGATCCCTGGTTTATAATAGTA-AGATACATACATAATCATGGTC-----------TATCTATTAGCTTATAAGTAT---------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
3150 scaffold_6540:12744044-12744110 + 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGCAGTTGCCACTTGTCTGTTTGATTTAAAACTTTATAATTAAAGTGGTTTTGACTTAAATTGGTT----------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
1732 scaffold_6496:1330657-1330709 + 28.68
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTCATTTCACGATTAAATTTATATACATACATATATATAATTATAGTTGCATT------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
......................ATACATACATATATAGAGTT.........................................................................................2040.250.250.000.000.00
1757 scaffold_6496:7975261-7975312 + 27.91
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAACTAAATATTTAATAATTATAATTAAATAAAAAATATAAATATTTAAA-------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
6234 scaffold_6500:23436135-23436189 - 27.46
TTGAACTT-ACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAATTCAACTATTTACTGATTTTAC---CAAGTTTATCAT-AAATTTGGTTTGACTA-------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
2360 scaffold_6500:14970704-14970767 + 26.36
TTGAACTTACTGT-------------------TTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAAACTATTATATACAAAATTATAATAATTTTAATAATATAAAAAATATATAAATAATTAAA--------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
3557 scaffold_6680:13887285-13887332 + 25.58
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTTACATACATATTAATAAATATAAATATACATATATGGGTAAAATT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
6188 scaffold_6500:16606432-16606482 - 25.58
T----TGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGGCTTGATGTTTTTATATATCAATTTCATATACATATATATAATTAGAAT------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
6322 scaffold_6500:29172683-29172730 - 24.81
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTATGTTTCCTGTTTTCTGATGTTAAATGTAGAGAAATACCTAATGCT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo


droGri2 - 28 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1128 scaffold_14853:628777-628885 - 50.39
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTG------GCTCGTCGGTATGGCTGCGATTGAGC-TATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TA-------CAATTTCAAGTTGTAAAGTATATATATATATATATAGTGTTGTTGGCTTGGACGTGGAAGCGCTTACGCGTGTGTATATATAATATATAGCATATAATATACATATA----------------------
SizeHit CountTotal NormV109
Male body
237 scaffold_14906:3705324-3705413 + 37.98
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
---------------------GTTATATTCAGTCCTGTGCTTTGTACTTCCTCGAATATTCATCGCCTGCTAGGCAGAAACGTTACGCTTAAGGCTTAAATTGCATTTGAT--------------------
SizeHit CountTotal NormV109
Male body
339 scaffold_15074:864873-864959 + 33.33
TTGAAC------------------TTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTAC-GACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTTAATTGTTTTTTTTTTATGGTTTTACTGTTCCTAGACTTCAAACCTTAATATATAATTTGAATCGCCTTCATTATTCACTTACTG---------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
24 scaffold_4554:6109-6165 + 30.71
TTGAACTTACTGTTTAATAATGT--TAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
GCGAA--TAATGAAAAATAATTTTTAAAATATATATATACAATTAAAGCTGCCCTCGTT--------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
586 scaffold_15112:4045617-4045681 + 29.46
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TGGAAAATGTTAAAGAAACATGTTAAATATAGTTAAGAAATTACGGAAATTTT---------------------------------------------ATTTGAATACAA---------------------
SizeHit CountTotal NormV109
Male body
821 scaffold_15245:13055223-13055292 + 27.89
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAAGGAAATACTTGTAA--GACAAGTAATAATATGCGAATAAA----------------------------------------------------------TATTGAAATGTG-TGTATGTCATGTCTT
SizeHit CountTotal NormV109
Male body
1462 scaffold_15110:16859979-16860031 - 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAACTCATAATTAGATAAAGTTAAATAGCAAACCATGAAAAAAGTTGACTT------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
1873 scaffold_15252:11712244-11712294 - 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
T----------GTTTCATAGTTTTGTTTTCATTTTTATGACTAAAGTTTCCTTGGAAATGA----------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
1495 scaffold_15110:23563682-23563744 - 27.13
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTAAGTACAATTTGGTATAATATAAAATGTAGACTTGCTAATTAT---------------------------------------------------TTAATTACACTTAGGTAC-----------------
SizeHit CountTotal NormV109
Male body
574 scaffold_15112:2856383-2856435 + 24.81
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTGCACTTATGGCTGTACACACTCACACACATATATATATACAAATTTAGCTT------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
1657 scaffold_15203:2022638-2022703 - 24.61
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CAAAATTGGCAAATCGATAACAACGATAATTG----------TAAATCGATAAAACTACAACTTGGAGGATAGTCG-------------------------------------------------------
SizeHit CountTotal NormV109
Male body
776 scaffold_15203:8954952-8954993 + 22.48
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATGTACTTTCGTTTGGATATACATATATACATATATATAATT-----------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
1710 scaffold_15203:7582018-7582064 - 21.71
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ATATATATATTTATATATATTCATACATATATATATATATTTGAAAT------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
799 scaffold_15245:5937821-5937868 + 21.47
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTATACTTTGTATTTGATAATATCACTTTTTGCCACACAATGTTGCTT-----------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
797 scaffold_15245:2765762-2765805 + 20.93
TTGAACTT--ACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAATTTCTACTTTGGGATAAGATAAAAATTACGAAAATAATT-----------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
1080 scaffold_14822:59124-59165 - 20.93
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGATATTTATGCTGATCGCTAAAAAATATAAATATATAATT-----------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
1133 scaffold_14853:1160583-1160630 - 20.93
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTCAGCTTTCAGTTTTTTTCTGAAAAAATAATAATAATATTTATAGAA-----------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
774 scaffold_15203:8844528-8844569 + 20.93
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TT-----------------------------------------------------------------------------------------AGTTATACTCTGTATTTAATTAAGGCAGCCAGTAAATTAT
SizeHit CountTotal NormV109
Male body
1354 scaffold_15074:7473075-7473127 - 19.38
TTGAACTTACTGTTTAAT-------------AATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
CTTGATTGTTTTTTTAATTTACGGTGGGCCAAATTTGACTTACAATTATGTAA-------------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
43 scaffold_8834:723-762 + 18.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
ACATATTTTCAGTTTTTTGATGCAGAATCAAAATATATAA-------------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
1759 scaffold_15245:5143643-5143682 - 18.6
TTGAACTTACTGTTTAATAATGTTAAATACAGATATATAATTAAAGTTGCCTTGGCTACGACTTGCTGGCTCGTCGGTATGGCTGCGATTGAGCTATGATCTGCATTTAATTATGGTCCCCGCCATATTCC
TTGAGCCTGCCATTAAGTTATTCTATCAACACATTTGTAA-------------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body


Generated: 04/20/2012 at 05:47:50 EDT