Possible Orthologs for sblock222077

droSim1 - 72 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
238 chrU:9556601-9556718 - 61.57
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGGTTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGA--TAATCCG----TATAGTATAATAAGTA---CAATAATAATAAGTGTTGCGATGATA--------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..TTGTTTTCAGTTATTTTC...............................................................................................................................1840.250.000.250.000.00
171 chr3h_random:1390775-1390890 - 61.32
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGGTTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAT-----TCCGTA-TAGTATAATAAGTAGAATAATAATAAGTGTTACTA-------------------------TGA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..TTGTTTTCAGTTATTTTC...............................................................................................................................1840.250.000.250.000.00
92 chrU:7781159-7781299 + 56.31
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATA-------TGTAAC----CCATTTATAATT--TTATATACGAA-----AATACTTATCCTCTGAGGGAGTGA
ATTTTGATTTTTTCTTATTTTAAGTTTTGCATACAGCATCATAAATGGTTTAAATGA---TACATAT-CTTAAATATGAGTACAACAAAATTAGTGCGATTATTACA---ATGATCATTTGTATGT-AAAGTGTAAT-ATTATTCTCTGA--------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................ATCATxAATGGTTTAAAGGA---T.................................................................................................20280.070.000.000.070.00
..TTTGATTTTTTCTTATTTTAAGTTT...................................................................................................................................25260.040.000.000.000.04
...........................TACATACAGCATCATAAATGG..............................................................................................................21270.040.040.000.000.00
............................................................................................AGTGCAATTATTACA---ATGATC..........................................2160.170.170.000.000.00
.........................................................................................ATTAGTGCAATTATTACA---ATGATCATT.......................................2750.200.000.000.000.20
53 chrU:811001-811140 + 54.46
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCT-ACATAAATGTATAATATGTAACCCATTTATAA----------TTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTGATTTTTTCTTATTTTAAGTTTTGCATACAGCATCATAAATTGTTT--TAAATGATACATATCTTAAATATAAGTACAAAACAATTAGTGCAATTATTACAATGATCATTCGTATGTAGTGTAATACT-GTTCTCTGA--------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
...........................................................................................AGTGCAATTATTACAATGATC.......................................2160.170.170.000.000.00
..TTTGATTTTTTCTTATTTTAAGTTT............................................................................................................................25260.040.000.000.000.04
........................................................................................ATTAGTGGACTTATTACA.............................................1850.200.000.000.200.00
........................................................................................ATTAGTGCAATTATTACAATGATCATT....................................2750.200.000.000.000.20
123 chrU:15652095-15652196 + 52.99
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTAATTTACTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGAT---------------------------AATCCGTATAGTATAATTAGTACAATAATAAT------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
182 chr3R_random:117470-117598 - 51.16
ATTTGTTTTCGGTTGTTTTCTTATTTT------CGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATA--TGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTTGTTTTGATT--TTTTCTTATTTTAAGTTGTGCATACAGCATCATAAATATCTTA----ATGATACATT-TCTTAAATATAAGTACAACAAAATTAGTGCAATTAT------------TACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
......................TTTTTGAGTTGTGCATAC............................................................................................................1812.000.002.000.000.00
...........................................ATCAAAAATATCTGA----ATG...................................................................................1811.000.000.001.000.00
..................................................................................................AGTGCAATTAT------------TACAATGATC.................2160.170.170.000.000.00
.............................................CATAAATATCGTA----ATGAT.................................................................................1820.500.000.000.500.00
...............................................................................................ATTAGTGGACTTAT------------TACA.......................1850.200.000.000.200.00
...............................................................................................ATTAGTGCAATTAT------------TACAATGATCATT..............2750.200.000.000.000.20
......TTTGATT--TTTTCTTATTTTAAGTTT...................................................................................................................25260.040.000.000.000.04
...TGTTTTGATT--TTTTCTTT.............................................................................................................................18120.080.000.000.000.08
..TTGTACTGATT--TTTTCTTATT...........................................................................................................................2111.000.001.000.000.00
37 chr3h_random:829501-829611 + 49.97
ATTTGTTTTC----------GGTTGTTTTCTTATTTTCGTATATAAAATTATAAAT------GGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGGTTATTTTCGGTTGTTTTCTTATCTTCGTATATAAAATTTAAATTGGTTATAGGTTACATATTTTGA---------------------------TAATCCGTATAGAATAATAAGTACAATAATAAT------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........................................................................................................................................T------------------18120.080.000.000.000.08
..TTGTTTTCAGTTATTTTC........................................................................................................................................1840.250.000.250.000.00
195 chrU:1732666-1732791 - 49.57
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTGGTTTTTTCTTAATTTTAGTTTTGTATATATCATTATAAATGGATTAAG----AGTAACATGTTTTGAATATAAGTATAATAGA----------ATAAGTGTAATAGTAACAATAATTATTAGTATGTAAAGTGT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
54 chrU:876253-876407 + 48.97
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATA--TGTAACCCATTTA---TAAT-----TTTATATACGAA----AATACTTATCCTCTGAGGG------AGTGA
ATTTTGATTTTTTCTTATTTTAAGTTTTGCATACAGCATCATAAATGGTTTAAATGAT---ACATA-TCTTAAATATAAGTACAACAAAATTAGTGCAATTATTACAATGATCATTTGTATATAAAGTGTAATA-TTGTTCTCTGAAATCATCTCAACAA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.......................................................................................................................................TTGTTCTCTGAAATCATCTCAACAA2513.000.000.000.003.00
.....................................ATCATxAATGGTTTAAAGGAT---...................................................................................................20280.070.000.000.070.00
.........................................................................................ATTAGTGGACTTATTACA.....................................................1850.200.000.000.200.00
..............................................................................................................ATCATTTATATATAAAGA................................1840.250.000.000.000.25
...........................TACATACAGCATCATAAATGG................................................................................................................21270.040.040.000.000.00
..TTTGATTTTTTCTTATTTTAAGTTT.....................................................................................................................................25260.040.000.000.000.04
.........................................................................................ATTAGTGCAATTATTACAATGATCATT............................................2750.200.000.000.000.20
............................................................................................AGTGCAATTATTACAATGATC...............................................2160.170.170.000.000.00
....................................................................................................................................TA-TTGTTCTCTGAAATCATCT......2111.000.000.000.001.00
...............................................................................................................................TGTAATA-TTGTTCTCTGAAATC..........2211.000.000.000.001.00
.......................................................................................................................................TTGTTCTCTGAAATCATCTCA....2111.000.000.000.001.00
96 chrU:9035188-9035313 + 48.91
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGC-TACATAAATGTATAA--TATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTGATTTTTTCTTATTTTAAGTTTTGCATACAGCATCATAAATGGTTTAAATGA---TACATATCTTAAATATAA--GTACAACAAAATTAGTG------------CAATTATTACAATGATCATTCGCATGTAAAGTGT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................ATCATxAATGGTTTAAAGGA---T..................................................................................20280.070.000.000.070.00
..........................................................................................ATTAGTG------------GACTTATTACA.......................1850.200.000.000.200.00
..TTTGATTTTTTCTTATTTTAAGTTT....................................................................................................................25260.040.000.000.000.04
...........................TACATACAGCATCATAAATGG...............................................................................................21270.040.040.000.000.00
.............................................................................................AGTG------------CAATTATTACAATGATC.................2160.170.170.000.000.00
..........................................................................................ATTAGTG------------CAATTATTACAATGATCATT..............2750.200.000.000.000.20
55 chrU:1342254-1342396 + 48.25
ATTTGTTTTCGGTTGTTTTC---------TTATTTTCGTATATAAAATTATAAATGGGTTAC----ATAATGTTATATAATGCTAC--------ATAAATGTATAAT--------ATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AGTGAAT-ACATTTGTGTGTTAAATATAGGTATCTTAACATGAAAAATTATGTAGGAGTCGTTAGTATA--AGTTTCTAAAGCTAACAATCTATTTAGGTGTTCATCAGATTCTATTGTAAC--A-TTTTGATTTGATATACATTAATA--------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..................................................................................................................ATTATAAC--A-xTTTGATTTG.................................18110.000.001.004.005.00
...........................................AAAATTATGTAGCAGACG............................................................................................................1811.000.001.000.000.00
......................................................................................................TCATCGGATTCTATAGTAA................................................1911.000.000.000.001.00
230 chrU:7795004-7795153 - 48.03
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAA-ATTATA---------------AATGGGTTACATAATGTTATATAATGCTACATAAATGT-ATAATATGTAACCCATT-TATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AATTGTTTTTG-TTATTTTTAGTTTTAAGTAGATACAAACTATACAAAATTGTGAGGCTAATGAGTGATACGATAATAGAGACTGTAATATCGATTTTATCTTT-----TCTATTACATAATT--AGATCTTACTAACACTAATATTTAACATAGTTA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.................................................................TGATACGATAATAGAGACTGTAAT.....................................................................2414.000.000.000.004.00
.........................................................................................................................TT--AGATCCTACTAACACT.................1814.000.000.001.003.00
..................................................................GATACGATAATAAAGACTGTAATAT...................................................................2521.000.000.000.001.00
....................................................................TACGATAATAGAGACTGTAATATC..................................................................2412.000.000.000.002.00
............................................................................TAGAGACTGTAATATCGATTTTATC.........................................................2512.000.000.000.002.00
.........................................................................................................................TT--AGATCCTACTAACACTAATATT...........2412.000.000.000.002.00
................................ATACAAACTATACAAAAC............................................................................................................1821.000.000.000.001.00
.................................................................TGATACGATAATAGAGACTGTAATATC..................................................................2711.000.000.000.001.00
.............................................................TGAGTGATACGATAATAGAGACTGTAAT.....................................................................2811.000.000.000.001.00
.........................................................................................................................TT--AGATCTTACTAACACTAATATTT..........2511.000.001.000.000.00
.......TTTG-TTATTCGTAGTTTT....................................................................................................................................1820.500.000.000.000.50
.........................................................................................................................TT--AGATCCTGCTAACACT.................1811.000.000.000.001.00
....................................................................TACGATAATAGAGACTGTAATATCG.................................................................2511.000.000.000.001.00
104 chrU:9556596-9556697 + 47.87
ATTTGT--TTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTATATCATCGCAACACTTATTATTATTGTACTTATTATACTATACGGATTATC--------------------AAAATATGTAACCCAAAATCCATTTATAATTTTATATAGGAAAATA--------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
............................TTGTxCGTATTATACTATA...............................................................................................1820.500.000.000.000.50
11 chr2h_random:2343181-2343299 + 46.74
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAA-TACTTATCCTCTGAGGGAGTGA
ATTATTGTTATGTTCAGCTCAAGTTTCTGCATCCATGTGCATA-------TACATATGCTTATAAAAATTCAGGTAAATGTACACT----AACACATATATGGTT-TCTATGCGGCACTTGCCCATGCTCT----------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................................ATATGGATATAAAAATTC......................................................................1821.000.000.000.001.00
.......................................................................................................GT-TCTATGCGGCACTTGCTC.................2011.000.000.000.001.00
..................................................................................................................................T----------18120.080.000.000.000.08
94 chrU:8159698-8159805 + 46.25
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTT---ATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
---TGTTTTTCATTTCTTTTTTAATATTATGAATAAAATCATTATTTAATCCAATAATATACCATATGCTTATAAA--AAATTTATAAACAACTTAATTAGCATAGTCTTACA------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.......................................CATTATTTAATACAATGA......................................................................................1816.000.000.001.005.00
..................................AAAAGCATTATTTAATACAAT........................................................................................2111.001.000.000.000.00
.......................................CATTATTTAATACAATGAT.....................................................................................1911.000.001.000.000.00
....................................AAGCATTATTTAATACAAT........................................................................................1911.001.000.000.000.00
.................................TAAAAGCATTATTTAATA............................................................................................1811.001.000.000.000.00
...............................TATAAAAGCATTATTTAAT.............................................................................................1911.001.000.000.000.00
.....................................AGCATTATTTAATACAAT........................................................................................1811.000.000.001.000.00
..................................AAAAGCATTATTTAATACA..........................................................................................1911.001.000.000.000.00
118 chrU:14364227-14364343 + 45.95
ATTTGTTTTCG-GTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AATTGTACATGTGTGGATACAATAATTATGTATGTTGGAAAT---------AAAATGATATTTTATAATGAAATATGTATATATAAAAAGATATAATTATAGAAACATATATATTACAATAATTAT---------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................ATAATTATGTATGTTGGAA.....................................................................................................19112.000.000.002.0010.00
.......................AATTATGTATGTTGGAAAT---------A.........................................................................................20112.000.000.005.007.00
.............................GTATGTTGGAAAT---------AAAATGATATT...............................................................................24112.000.000.003.009.00
........................ATTATGTATGTTGGAAAT---------A.........................................................................................1919.000.000.001.008.00
.....................ATAATTATGTATGTTGGA......................................................................................................1818.001.000.004.003.00
..........................TATGTATGTTGGAAAT---------AAAATGATA.................................................................................2518.000.000.000.008.00
.....................ATAATTATGTATGTTGGAAAT---------A.........................................................................................2218.000.001.004.003.00
....................AATAATTATGTATGTTGGAA.....................................................................................................2017.002.000.003.002.00
........................ATTATGTATGTTGGAAAT---------..........................................................................................1816.000.000.002.004.00
...........................ATGTATGTTGGAAAT---------AAAATGATATT...............................................................................2616.000.000.000.006.00
.............................GTATGTTGGAAAT---------AAAATGATA.................................................................................2216.000.001.003.002.00
...................CAATAATTATGTATGTTGGA......................................................................................................2016.000.000.002.004.00
...............................ATGTTGGAAAT---------AAAATGATATT...............................................................................2215.000.000.004.001.00
...............................ATGTTGGAAAT---------AAAATGAT..................................................................................1915.000.000.003.002.00
........................ATTATGTATGTTGGAAAT---------AAAATGAT..................................................................................2614.000.000.000.004.00
...........................ATGTATGTTGGAAAT---------AAAATGATA.................................................................................2414.000.000.000.004.00
...............GATACAATAATTATGTATGTTGGAAAT---------..........................................................................................2714.001.000.002.001.00
.....................ATAATTATGTATGTTGGAAAT---------AA........................................................................................2314.000.000.001.003.00
..............................TATGTTGGAAAT---------AAAATGATATTTTA............................................................................2613.000.000.000.003.00
..........................TATGTATGTTGGAAAT---------AA........................................................................................1813.000.000.000.003.00
.....................ATAATTATGTATGTTGGAAAT---------..........................................................................................2113.000.000.002.001.00
.........................TTATGTATGTTGGAAAT---------A.........................................................................................1813.000.000.000.003.00
......................TAATTATGTATGTTGGAAAT---------A.........................................................................................2113.002.000.000.001.00
.ATTGTACATGTGTGGATAC.........................................................................................................................1913.002.000.001.000.00
...............................ATGTTGGAAAT---------AAAATGATAT................................................................................2113.000.000.001.002.00
AATTGTACATGTGTGGATA..........................................................................................................................1913.000.000.000.003.00
....................AATAATTATGTATGTTGGAAAT---------..........................................................................................2213.000.000.001.002.00
.......................AATTATGTATGTTGGAAAT---------AAAAT.....................................................................................2413.001.000.001.001.00
.......................AATTATGTATGTTGGAAAT---------..........................................................................................1913.000.000.000.003.00
...........................ATGTATGTTGGAAAT---------AAAA......................................................................................1913.000.000.000.003.00
122 chrU:15101386-15101501 + 42.7
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATA----TAAAATTATAAATGGGTTACATAATGTTATAT-------------------------AATGCTACATAAATGTATAATATGTAACCCATTTATAATT--TTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AAAA-----------------------CGTAAATTAAAAAAATAATAAA---------AAGTGTATATTAATAATTTTAATCATTTTGTATTTGATCACTATATAAATA-ATAAAATTTAGAAATATTATAATTGTTAACAAACAAAAA----------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.............................................................................TCATCATTTTGGATTTGA............................................................................18130.000.0013.006.0011.00
................................................................................................................................ATTATTGTTAACAAACAA.........................1811.001.000.000.000.00
................................................................................TCATTTTGGATTTGAACA.........................................................................1811.000.001.000.000.00
.........................................................................................ATTTGATCAxTAGATAAAT...............................................................1811.000.000.001.000.00
............................................ATAAT---------AAGxGTATATTAATA..................................................................................................1911.001.000.000.000.00
151 chr2L_random:889451-889551 - 40.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAA-ATTAT-------------AAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AATTGTTTTT-GTTATTTTTAGTTTTAAGTAGATACAAACTATACAAAAATGTGGCTAATGAGCGATACGATAATAAAGACTGTAATATTATTATTTGATAT----------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..................................................................TACGATAATAAAGACTGTAATATTAT..............................................................261139.000.000.000.00139.00
..................................................................TACGATAATAAAGACTGTAATATTA...............................................................2514.000.000.000.004.00
................................................................GATACGATAATAAAGACTGTAATAT.................................................................2521.000.000.000.001.00
................................................................GATACGATAATAAAGACTGTAATATTAT..............................................................2812.000.000.000.002.00
................................ATACAAACTATACAAAAC........................................................................................................1821.000.000.000.001.00
..................................................................TACAATAATAAAGACTGTAATATTAT..............................................................2611.000.000.000.001.00
.................................................................ATACGATAATAAAGACTGTAATATTAT..............................................................2711.000.000.000.001.00
...........................................................TGAGCGATACGATAATAAAGACTGTA.....................................................................2611.000.000.000.001.00
..................................................................TACGATAATAAAGACTGTAATATTAC..............................................................2611.000.000.000.001.00
.......................................................................TAATAAAGACTGTAATATTATTATT..........................................................2511.000.000.000.001.00
...........................................................................AAAGACTGTAATATTATTATTTGATA.....................................................2611.000.000.000.001.00
.......TTT-GTTATTCGTAGTTTT................................................................................................................................1820.500.000.000.000.50
.........................................................................ATAAAGACTGTAATATTAT..............................................................1911.000.000.000.001.00
19 chr2L:21774849-21774942 + 40.31
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA-----------------------------------------------
GTTTGTTTTTGTTTATTGTTTTGTTTTTTATTAT---------------------------------------------------------------------------------------------TTTTAAGTATTTTTCAAAAACTTTAATGTATATATTACAAATATAACAAAAATATAAGAT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.........................TTTTAGTAT---------------------------------------------------------------------------------------------TTTTAAGTC...................................................1820.500.000.000.500.00
.....TTTTTGGTTATTGTTGTG....................................................................................................................................................................1820.500.500.000.000.00
.................................................................................................................................TTTAGTATTATTCAAAAAC.......................................1920.500.000.000.500.00
..........................................................................................................................................................................................T18120.080.000.000.000.08
.............TATTGTTCTGTTTTTTCT............................................................................................................................................................1820.500.000.000.500.00
133 chr2h_random:754424-754518 - 38.32
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A----------------------------------AACTTATAAATTGTTCTCATATTATAAGAA-----------AATATAAAATAAATAACCGCACAATATAACTAAAAAAAAAAAGATGCATCGATTGAGGGAGCCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
...................................................................................................ATTTAACAAAAAAAAAAA.......................18130.080.080.000.000.00
73 chrU:4686323-4686405 + 38.02
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTGATTTTTTCTTATTTTAAGTTTTGCATACAGCATCATAAATGGTTTA---AATGATACATA-TCTTAAATATAAGTACAACA-----------------------------------------------------
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................ATCATxAATGGTTTA---AAGGAT...............................................................................20280.070.000.000.070.00
..TTTGATTTTTTCTTATTTTAAGTTT.................................................................................................................25260.040.000.000.000.04
...........................TACATACAGCATCATAAATGG............................................................................................21270.040.040.000.000.00


droSec1 - 202 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
662 super_7722:503-638 - 65.94
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATAATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
614 super_4078:653-788 - 65.94
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTGCAATAATAATAAGTGTTACTATGATATAAAATATG-------------------------GTATTATTT-----------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.................................................................................TATAATACGGGCAATAAT...............................................................................1820.500.000.000.50
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
583 super_2153:366-501 - 65.94
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATAATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
211 super_1522:4183-4318 + 65.94
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTGCAATAATAATAAGTGTTACTATGATATAAAATATG-------------------------GTATTATTT-----------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.................................................................................TATAATACGGGCAATAAT...............................................................................1820.500.000.000.50
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
630 super_4696:1917-2052 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
555 super_1381:3917-4052 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
529 super_750:6063-6198 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
602 super_3292:2087-2222 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
615 super_4081:1191-1326 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
566 super_1682:3050-3185 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
595 super_2816:2354-2489 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
486 super_257:12773-12908 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
497 super_352:4281-4416 - 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
2 super_0:10588542-10588677 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...........................................................................................................................................TATTT----------------------------------1960.170.000.170.00
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
1 super_0:10584281-10584416 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
94 super_195:6196-6331 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
126 super_452:5672-5807 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
125 super_452:86-221 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
152 super_735:5903-6038 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
........................................................................................................................................GATTATTT----------------------------------1830.330.000.330.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
312 super_4784:1607-1742 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
...........................................................................................................................................TATTT----------------------------------1960.170.000.170.00
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00
316 super_5061:783-918 + 65.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-------GGTTACATAATGTTATA-------------------------------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGATTGTTTTCTTATTTTCCTATATAAAATTATAAATGGATTTTGGGTTACATATTTTGATAATCCGTATAGTATAATAAGTACAATAATAATAAGTGTTACTATGATATAAAATATGG--------TATTATTT----------------------------------
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.........................................TAAATGGATTTTGGGTTACAT....................................................................................................................21350.030.030.000.00
.....................................ATTATAAATGGATTTTGGGTT........................................................................................................................21350.030.030.000.00
.....................................................................................ATAAGAACAATAATAATAAGT........................................................................21330.030.000.030.00
.......................................TATAAATGGATTTTGGGTTAC......................................................................................................................21350.030.030.000.00


droYak2 - 28 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
287 chr3R:6981890-6982030 - 57.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGT-------TATATAATGCTA------CATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTGAATTTTTTATATAAAACAGTTAGTGGATTTAGT---GTAAAAATTTTTGATAGGACAAGAAAAATTATAAGAACAATAACTAAAATTATTATAGTTGCATAAAATGTGGTA-TTATTTTCTGA--------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................................................................CATTATAAGAACAATAGCT..................................................1930.330.000.000.000.330.00
......................AATTCTTTAxATAAAACAGT...............................................................................................................1920.500.000.000.000.500.00
359 chrU:16641261-16641401 - 57.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGT-------TATATAATGCTA------CATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTGAATTTTTTATATAAAACAGTTAGTGGATTTAGT---GTAAAAATTTTTGATAGGACAAGAAAAATTATAAGAACAATAACTAAAATTATTATAGTTGCATAAAATGTGGTA-TTATTTTCTGA--------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....................................................................................CATTATAAGAACAATAGCT..................................................1930.330.000.000.000.330.00
......................AATTCTTTAxATAAAACAGT...............................................................................................................1920.500.000.000.000.500.00
248 chr2L_random:1643093-1643233 - 57.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACAT-----AATGTTATATAATGCTACA-----TAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTTTTTTCTGAATTTTGTATATAAAACAGTTAGTGGATTTAGTGTAAAAATTTTTGATAGCACAAGAAAAATTATAAGAACAATAACTAAAATTATTATAGTTGCATAAAATGTGGTA-TTATTTTCTGA--------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
......................................................TGTxAAAATTTTTGATAGCT............................................................................1911.001.000.000.000.000.00
.................................................................................CATTATAAGAACAATAGCT..................................................1930.330.000.000.000.330.00
349 chrU:14410529-14410651 - 52.67
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATT----ATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-------TTCAGATATTTTCATAATTTTGTAAATGAAAGATAATTTTAATACCTTTCG----ATTAAGTGGTCATACAATATGGTATGATAAATA--------GTAGATTTATACTCGAAAATTATTGTTTTTGGAGGCAGT--
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...........................................................................................................TTTTATACTCGAAAATTAATGTTT.............2411.001.000.000.000.000.00
..............................................................................................................TAGACTCGAAAATTAATGTT..............2011.000.000.001.000.000.00
..........................................................................TACAATACGGTGTGATAAATA--------GTAGAT...................................2711.000.000.001.000.000.00
.........................................................................................................................ATTAATGTTTCTGGAGGCA....1911.000.000.001.000.000.00
276 chr3h:223793-223896 - 45.5
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAA--ATTATAAATGGGTTA-CATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AGAAATTTTCA--TATTTGCTTGTTGTAAAATGTTAATTATTTGAATTAGATCAGTATAATGTTGTTCAATTGTATTTGAAAAGATAATATGTCATTCATATAAAA-------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.........................GTAAAATGTTTATTGTTT....................................................................................................1816.000.001.000.005.000.00
.........................GTAAAATGTTTATTGTTTG...................................................................................................1911.000.000.001.000.000.00
...........................AAAATGTTTATTGTTTGAA.................................................................................................1911.000.000.001.000.000.00
.........................GTAAAATGTTTATTGT......................................................................................................1660.170.000.000.000.170.00
.........................GTAAAATGTTAATTATGT....................................................................................................1840.250.000.000.000.250.00
.........................GTAAAATGTTTATTGTTTGA..................................................................................................2011.000.000.001.000.000.00
..........................................TGAATTAGATCAGTATAATGTTGTT............................................................................2540.250.000.000.250.000.00
.........................GTAAAATGTTTATTGTTTGAA.................................................................................................2111.000.000.001.000.000.00
363 chrU:19225256-19225385 - 44.41
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTT----------ATATAATGCTACATAAATG----------TATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AATATTATTCAG------------------------------GAACAGGTCAATTAAAGCCTTTAACCTAAATGTTGTCTTAAGTAAATAATCTCTTAATTATAAAATATAATTTGTTTTCATCTTAATATATAGGAATAGGTCAAATTTCGAGTAGTGA
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
....TTATTCAG------------------------------GAACAGGTCAATTAAAGCC...................................................................................................27110.002.000.008.000.000.00
....TTATTCAG------------------------------GAACAGGTCAATTAAAGC....................................................................................................2619.006.000.003.000.000.00
....TTATTCAG------------------------------GAACAGGTCAATTAAAG.....................................................................................................2515.000.000.005.000.000.00
.............................................................................................................................TAATATATAGGAATAGGTCAAATTTC.........2612.000.000.002.000.000.00
.............................................................................................................................TAATATATAGGAATAGGTCAAATTT..........2511.000.000.001.000.000.00
......................................................TAAAGCCTTTAACCTAAATGTTGTCT................................................................................2620.500.000.000.500.000.00
....TTATTCAG------------------------------GAACAGGTCAATTAACC.....................................................................................................2511.000.000.001.000.000.00
AATATTTTTTAG------------------------------GAACAGGT..............................................................................................................2011.000.000.001.000.000.00
.......TTCAG------------------------------GAACAGGTCAATTAAAGC....................................................................................................2311.000.000.001.000.000.00
.............................................................................................................................TAATATATAGGAATAGGTCAAATT...........2411.000.000.001.000.000.00
....TTATTCAG------------------------------GAACAGGTCAATTAAAGCCT..................................................................................................2811.000.000.001.000.000.00
....TTATTCAG------------------------------GAACAGGTCAATTAAAGCT...................................................................................................2711.001.000.000.000.000.00
399 chrX_random:1004540-1004657 - 43.8
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGT--AACCCATTTAT--------------------------AATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTGTTTTGT-----TCGTTAATCTTTTGTATAAAATTAAAAAA--------------------------ATTAAATGTATAAATTGTACAAGCCAATTGTTGTCTGTTGCCTTTTGTGTTTTGTATAATTT----------GTCATTTAT---------TAATGA
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
122 chrU:12017765-12017865 + 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
96 chrU:7208077-7208177 + 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
127 chrU:12271651-12271751 + 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
333 chrU:11451656-11451756 - 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
336 chrU:12149519-12149619 - 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
383 chrU:23831956-23832056 - 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
172 chrU:22748466-22748566 + 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
272 chr3h:9492-9592 - 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA-AAATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATACAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
278 chr3h_random:7493-7593 - 41.92
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAA-ATTATA--------------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATT-GTTTTT-GTTGTTTTTAGTTTTAAGTAGATAAAAACTATACAAAATGTGAGGCTAATGAGTGATACAATAATAGAGACTGTAATAT-----------------------TATTATTTGATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................TACAAAATGTGAGGCTAATGAGTGATA......................................................................................2790.110.000.000.110.000.00
..................................................................ATACAATAATTGAGACTG.......................................................................1890.110.000.000.000.000.11
.TT-GTTTTT-GGTGTTTTTGGT....................................................................................................................................2090.110.000.000.110.000.00
......TTGT-GxTGTTTTTAATTTTAA...............................................................................................................................2090.110.000.000.000.110.00
.................................................TGTGAGGCTAATGAGTGATACA....................................................................................2290.110.110.000.000.000.00
124 chrU:12103575-12103664 + 40.5
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A-----------------------------------AATTATAAATTAATAAATTAATATTATTAAATTATAAATTAATTTTAAATAGAAAACTA-----AAATAATTCATTAAAAATTTCCTTTCCTCT----------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................................................ATTATTAAATTATTAATA................................................................1860.170.000.000.000.000.17
48 chr3L_random:1912868-1912953 + 36.96
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTT-------------------------AAATATTAATTTACAAATATCAATTATCATATCATATAATTATAAATCATTGCATGAAGCAATTCATTTTTTTAATATTATAT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
70 chrU:3475047-3475145 + 35.24
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAA---TATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATCTTTCATAGGCTTCTTCCTTAGTTTGTGATACTA---------------TCATAATGTCATGCATATAAATATGAGTATGCAAGTTCACCCAATGCTTTTATTACTGTACGT-----------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
150 chrU:17847315-17847388 + 30.43
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATA------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ACTTGTTTGCATTTTTGTTCGTTTACTCGTATGCGCCAATCTACAAGCCAATTCTCTACAC-ATGTTAGATAGCG-----------------------------------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
............TTTTGTTCGTTTACTCGTATGCGCC.............................................................................................................2511.000.000.000.000.001.00
..TTGTTTGCGTTTTAGTTCGTTTA.........................................................................................................................2311.000.000.001.000.000.00
..TTGTTTGCATTTTTGTTCGTT...........................................................................................................................2111.000.000.001.000.000.00
237 chr2L:22080542-22080608 - 27.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATATGGTTTACTTTATGTTTTATTTAATTTATATGTGATGATACTTATATTATATTGTCTCATACAA-------------------------------------------------------------------------
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head


droEre2 - 121 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
137 scaffold_4684:13326-13445 + 63.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTT---ATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGGTTGTTTTCTTTTTTTCGTATATAAAATTATAAATGGGTTACATATTTTGATA--ATCC----GTATAGTATAATAAGT------TTTATGATAATATAAAATATGATATTATTTTTT-----------TGA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.......TTTTGTTGTTTTCTTTTT......................................................................................................................1860.170.000.000.000.17
.........................................................................................................................TATTTATT-----------TGA1840.250.000.000.000.25
21 scaffold_882:930-1049 + 63.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTT---ATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGGTTGTTTTCTTTTTTTCGTATATAAAATTATAAATGGGTTACATATTTTGATA--ATCC----GTATAGTATAATAAGT------TTTATGATAATATAAAATATGATATTATTTTTT-----------TGA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.......TTTTGTTGTTTTCTTTTT......................................................................................................................1860.170.000.000.000.17
94 scaffold_3478:1252-1376 + 63.26
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATAT--------------------AATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTATAGGTTAGTACATATATAAGTACAATAATAATAAGTGTTATGATAATAAAAAATATGGTA-----TTATTTTTTTATA------------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..........................................................................................................ATGGGA-----TTATTTTTTTAT...............................1812.002.000.000.000.00
.........................................................................................................AATGGGA-----TTATTTTTTTA................................1820.500.000.000.000.50
.........................................................................................................AATGGTA-----TTAGTTTTTTA................................1811.000.000.000.001.00
..........................................................................................................ATGGTA-----TTAGTTTTTTAA...............................1811.001.000.000.000.00
.....................................................................................................AATAxATGGTA-----TTAGTTTTT..................................1911.001.000.000.000.00
........................................................................................................CTATGGTx-----TTATTTTTTTA................................1811.001.000.000.000.00
.....................................................................................................AATAxATGGGA-----TTATTTTTT..................................1911.000.001.000.000.00
.........................................................................................................TATGGTA-----TTGTGTTTTTAT...............................1911.000.001.000.000.00
..............................................................................................................TA-----TTATTTTTTAATA------------------------------1930.330.000.330.000.00
.........................................................................................................AATGGTA-----TTCTTTTTTTA................................1820.500.500.000.000.00
306 scaffold_4929:26551637-26551743 + 57.13
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAA--------------TGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTTCGGTTGTTTTCTTATTTTTGTATATAAAATTATTAATTGGTTATA-------------AGTTACATATTTTGATAATCCGTATAGTATAATAGGTA------CAATAATATAATATA----------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
453 scaffold_4751:39776-39909 - 54.66
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAAC------CCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTTTTCTTAATT-CTAATTTTGCGTACAACATAATGAATGGGTAAGAGATTTTCACTTAAAATTATACTATTGATTTCTATTTTACATTGAGTCACTTATCATTTTGTTTCCTTCTAGGTTTATATTC-----------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
405 scaffold_4449:18397-18522 - 54.11
ATTTGTTTTCGGTTGTTTTCTTAT-----TTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATAT--GTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTCGATTTTTTCCTAATTCTAATTTGGCGTACAACATCATGGATGGGTTAAACG---ATACGTA-TTTTAAATATAAGTACAATAAAATAAGTGTAATGATGATAATAGACACTAAAGTGTTT-----------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..................................................................................................GTGTAATGATGATAAAGGA..............................1920.500.500.000.000.00
........................................................................................AATAAGATAAGTGTGATGATGAT....................................2320.500.000.000.000.50
...................................................................................AGTACAATAAAATCAGAGT.............................................1950.200.000.000.000.20
.............................................................................................................................TATTT-----------------1930.330.000.000.000.33
..................................................TGAGTTAAACG---ATACGTA-TTT........................................................................21210.050.000.050.000.00
.........................................................................................................................AAAATTTTT-----------------1860.170.170.000.000.00
363 scaffold_3196:4349-4489 - 50.95
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTT--------------ACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATA----CGAAAATACTTATCCTCTGAGGGAGTGA
TATTGTCTCCCTCTATTATTATATCTCTAATTATGCAATTTTGGTTAAGTATGGTTTTTGGTAAATTCCAATTTAATATAATATTAGGT--------TTTACATAACTGATTTAAAATTTCTTATGAGTTTTTACATATCTACCTTCTG---------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..TAGTATCCCTCTATTATT..........................................................................................................................................1811.001.000.000.000.00
274 scaffold_4929:23399547-23399667 + 50.1
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATA----------------------CGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTAAATTTTGTATATAAAACAGTAAGTGGATTTAGTGTTCAAAT-----------------------------------------TTTTGATAAGAAAAATGATAAGAACAATAACAAAAAATATTATAGTTGCATAGAATGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
254 scaffold_4893:6677-6803 + 48.95
ATTTGTTTTCGGTTGTTTT-CTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTGTGTTTTGATTTCTTATTTTGAATTTTGCATACAGCATCATGAATGGGTTATATGATACA----AATCTTAAATATAAATACAATAAA----------ATAAGTGCAATTATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..............................................................................AAATACAATTAA----------AAAAGT...................................18150.070.000.000.000.07
...TGTTTTGTATTCTTATTTT.......................................................................................................................1920.500.500.000.000.00
528 scaffold_4846:72062-72188 - 48.95
ATTTGTTTTCGGTTGTTTT-CTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTGTGTTTTGATTTCTTATTTTGAATTTTGCATACAGCATCATGAATGGGTTATATGATACA----AATCTTAAATATAAATACAATAAA----------ATAAGTGCAATTATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..............................................................................AAATACAATTAA----------AAAAGT...................................18150.070.000.000.000.07
...TGTTTTGTATTCTTATTTT.......................................................................................................................1920.500.500.000.000.00
308 scaffold_4929:26579430-26579575 + 48.8
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATA---TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCT-------CTGAGGGAGTGA
TTTTGATTTCT----TATTTTGAATTTTACACACAGCATCATAAATGGGTTAAATGATATAAATCTTATATATTATATAAGTACAATAAAATAAGTGCAATTATGACAATGGTCATTAGTATTTTTATTTTTGTTATATTAAGTGGGTTG
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..........................................................................................................................TTTTATTTTGGTGATATTAA........2011.001.000.000.000.00
.............................CACAGAGCAGCATAAATG.......................................................................................................1830.330.000.000.000.33
...........................................................................................................................TTTATTTGTGTGATATTAA........1911.001.000.000.000.00
.....................................................ATGATATACAGCTTATATA..............................................................................1920.500.500.000.000.00
326 scaffold_1558:1702-1823 - 48.62
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTC----TTATTTTGAATTTTGCATACAGCATCATGAATGGGTTAAATGATACA----AATCTTAAATATAAATACAAT----AAAATATGTGCAAT------TATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
373 scaffold_3312:271-392 - 48.62
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTC----TTATTTTGAATTTTGCATACAGCATTATGAATGGGTTAAATGATACA----AATCTTAAATATAAATACAATAA----------AATAAGTGCAATTATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.............................................................................AAATACAATTA----------AAAAAGT...................................18150.070.000.000.000.07
241 scaffold_4845:1602762-1602883 + 48.62
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTT----CCTATTTTGAATTTTGCATACAGCATCATAAATGGGTTAAATGATACA----AACCTTAAATATAAGTACAATAA----------AATAAGTGCAATTATGATAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
588 scaffold_4929:26163523-26163644 - 48.62
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTC----TTATTTTGAATTTTGCATACAGCATCATGAATGGGTTAAATGATACA----AATCTTAAATATAAATACAATAA----------AATAAGTGCATTTATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.............................................................................AAATACAATTA----------AAAAAGT...................................18150.070.000.000.000.07
356 scaffold_3110:7061-7185 - 48.03
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTA--TAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
CCTAATTCATGGTTTTTTTCTTATTT-CTTTCGTAAATTTCGGTAATTTTATTTCATTCTATCTTTTAATTCTGTTTCATTA------ATTTAATTTTACTAAATTTTTGTTTAATGTAACATTCACTTTCT----------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
...........GTTTTTTTTTTTTTT-CTT................................................................................................................18140.070.070.000.000.00
........................................................................................ATTTAATTTTAATAAATTA...................................1920.500.000.000.000.50
466 scaffold_4770:195066-195187 - 47.99
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTC----TTATTTTGAATTTTGCATACAGCATCATGAATGGGTTAAATGATACA----AATCTTAAATATAAATACAATAA----------AATAAGTGCAATTATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.............................................................................AAATACAATTA----------AAAAAGT...................................18150.070.000.000.000.07
255 scaffold_4895:13038-13159 + 47.99
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTC----TTATTTTGAATTTTGCATACAGCATCATGAATGGGTTAAATGATACA----AATCTTAAATATAAATACAATAA----------AATAAGTGCAATTATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.............................................................................AAATACAATTA----------AAAAAGT...................................18150.070.000.000.000.07
333 scaffold_1859:2341-2452 - 47.96
ATTTGTTTTCGGTTGTTTTCTTATTTT----------CGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTGTCGGTTGTTTTCCTATTTATAAAATAGGATGTTTATAAAATTATAAATGGGCTATAG-------------GTTACATATTTTG-------ATAATCCGTCTAGTGTAATAGGTACAAAAATAAT------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
............................AAAATAGGAGGTGTATAA........................................................................................................1811.000.000.000.001.00
.........................................................................................................................TCAAAAATAAT------------------1840.250.000.000.000.25
420 scaffold_4679:13479-13606 - 47.1
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTT-----------ACATAATGTTATATAATGCTACATAAATGTATAA-----TATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTTTGTTCAATTTGTTGTGAATTCTCTTTTTTATATTTAACAATTAATTTTTTGGGAATGCCTTTATATTTTGAATTTTCGCGGCTATGTACAAAGCGCTACAGAGCTCATATCTAATACTATACA----------------------------
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
........................................AACAATTAATTTGTAGGG..................................................................................................1812.000.000.000.002.00
.............................................................................ATTTCGCGGCTATGTACA.............................................................1820.500.000.000.000.50
...........................................................................................TACAAAGCGCTACAGAGCTCG............................................2111.000.000.000.001.00
.........................................................................................TGTACAAAGCGCTACAGAGCTGT............................................2311.000.000.000.001.00
.......................................................................................TATGTACAAAGCGCTACAGAGCT..............................................2311.000.000.000.001.00
..........................................................................................GTCCAAAGCGCTACAGAGCT..............................................2011.001.000.000.000.00
...........................................................................................TACAAAGCGCTACAGAGCTCGTAT.........................................2411.000.000.000.001.00
..............................................................................TTTCGCGGCTATGTACAAAG..........................................................2020.500.000.000.000.50
555 scaffold_4929:23195028-23195149 - 46.73
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATA--TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGATTTC----TTATTTTGAATTTTGCATACAGCATCATGAATGGGTTAAATGATACAAATCTTGATTATAAATACA-ATAA---------------AATAAGTGCAATTATGACAATGGTCATTAGTATGTAAAGTGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.........................................................................AAATACA-ATTA---------------AAAAAGT...................................18150.070.000.000.000.07


droFic1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
187 scf7180000454094:3746-3886 - 58.86
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTA--------TATAATGCTACATAAAT-----GTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTCTTGTTTTCTAAATTTTGTATATAAAATGGTGAGTGGATT---TAGTGTAAAAAATTTTGATAGGGCAAGAAAAATAATAAGAACAATAACTACAATTATTATAATTACGTAAAGTGTAGT-GTTATTTTCTGA--------
SizeHit CountTotal Norm
40 scf7180000453110:8337-8485 + 48.75
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTAT---------------AAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAA-AATACTTATCCTCTGAGGGAGTGA
AATGACACGCGA--GTTATATTATATCTATATTTGCAATCAATGTTATGTTATGGTTATCTTGGTTCAATAAT-TTAAATAATGTTGTATATATAAAATATATTATATATGTATATAACTTTATATATATATTATATTTAATATTTTAAGA----A
SizeHit CountTotal Norm
61 scf7180000453406:15858-15971 + 33.98
ATTTGTTTTCGG-TTGTTTTCTTATT-----------TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTCGTTCGTTGAGAGTGCTTTTAGTTCAAACTTTGTCTCGGGCA-----------GTGAGTTTAGTGCAGTTGTA------------AGTGCGTGG-------A-TATTTTCCACATTTTGCACGTAGA-------TCGGTGGAGGTTTGG
SizeHit CountTotal Norm
123 scf7180000452169:2497-2508 - 5.07
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
--------------------------------------------------------------------------------------------------------------------------------CCGGTGGGGTGG
SizeHit CountTotal Norm
None None
46 scf7180000453184:4421-4425 + 2.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A---------------------------------------------------------------------------------------------------------------------------------------GAGA
SizeHit CountTotal Norm
None None


droEug1 - 14 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
26 scf7180000409434:14602-14733 + 59.78
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTA------CATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGATTGTTTTCTAAATTTTGTATATAAAAAGGTAAGTGGATTTAGTATAAACAATTTTATAATATGATC----ATTTTATGATAACTACTAATATTATTATTATATTTTAAAATGTCATTATGTTCT----------
SizeHit CountTotal Norm
66 scf7180000409096:1406-1546 - 59.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGT------TACATAATGTTATATAATGCTACATAAAT-----GTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTCTTGTTTTCTAAATTTAGTATATAAAATGGTGAGAGGATTTAGTGTACAAAATTTTG-ATAGGGCAAGAAAAATAATAAGAACAATAACTACAATTATTATAATTACGTAAAGGGTAGTG-TTATTTTCTGA--------
SizeHit CountTotal Norm
5 scf7180000407129:46863-46983 + 54.45
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACA----TAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ACTATTTTTTGCTTGTTTTCTAAACTTTGTATATAAAAAGGTAAGTGGATTTAGTGTAAACAATTTGATAGGACAACAAAAATAATAAAAACGATAACTACTAATA-TTATAATTACGTAAA----------------------
SizeHit CountTotal Norm
44 scf7180000409885:143104-143229 + 53.5
ATTTGTTTTCGGTTGTTTTCTTATT---------TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTA--------TAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTTATTA--TTGTTTTATTATTTTTTGTTTTTTCTTATTATAACATATAATTAAATTTAATAAATATATTTACATACGTATAAATGTACAATTTTCTAATGTGTATACTATTTATATATATATAT-----------------------------
SizeHit CountTotal Norm
11 scf7180000408144:416-536 + 49.53
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATATTTTATA------TTTTATATTTTATATTTTTATATTTTATAT---TTTTATATTTTTATATTTTTATATTTTTATATTTTATATTTTATATTTTTATATTTTTATATTTTTATATTTTTATATTTT----------
SizeHit CountTotal Norm
14 scf7180000408265:769-878 + 46.97
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TATTTT-TATATTTTATATTTTATATTTTTATATTTTATATTTTATATTTTATATTTTTATATTTTATATTTTATATTTTTATATTTTATATTTTATATTTATATTTATAT-----------------------------
SizeHit CountTotal Norm
78 scf7180000409452:3547-3611 - 33.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
--------------------------------------------------TAACTAGTCTTATA-AATGCTATTGAAACGTATTGTATGTAACCAACCTGAAATAGTATATACTAA------------------------
SizeHit CountTotal Norm
81 scf7180000409675:59719-59769 - 27.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTAAATTTTGTATATAAAAAGGTATGTGGATT-----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
43 scf7180000409852:2664-2712 + 26.81
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTAATTTTTGTATAGAAAGAGGTAAAGGGG-------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
38 scf7180000409683:9138-9174 + 17.39
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-------------------------------------------------------------------------------------------------------TTTTCTGTGGCGAAGTAGTTCTCCTCTGCGGCGATGA
SizeHit CountTotal Norm
9 scf7180000407749:7935-7971 + 17.39
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-------------------------------------------------------------------------------------------------------TTTTCTGTGGCGGAGTAGTTCTCCTCTGCGGGGATGA
SizeHit CountTotal Norm
6 scf7180000407357:9126-9162 + 17.39
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-------------------------------------------------------------------------------------------------------TTTTCTGTAGTGGAGTAGTTCTCCTCTGCGGCGATGA
SizeHit CountTotal Norm
86 scf7180000409738:14694-14730 - 17.39
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-------------------------------------------------------------------------------------------------------TTTTCTGTAGTGGAGTAGTTCTCCTCTGCGGCGATGA
SizeHit CountTotal Norm
88 scf7180000409775:37947-37983 - 17.39
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-------------------------------------------------------------------------------------------------------TTTTCTGTAGTGGAGTAGTTCTCCTCTGCGGCGATGA
SizeHit CountTotal Norm


droBia1 - 15 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
178 scf7180000300680:23-161 - 61.1
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACAT-------AATGTTATATAATGCTACATAAAT-----GTATAATATGTAAC-CCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTCTTGTTTTCTAAATTTTGTATATAAAATGATAAGTGGATTAAGTGAGAAACAATTTT-GATAGGGCAAGAAAAATAATAAGAACAA----TAACTACAATTATAATCACTTAAGTGTAGAT-TTTATTTTCTGA--------
SizeHit CountTotal Norm
112 scf7180000302470:116766-116867 + 45.76
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTTTTGTTTTCTAAATTTTGTATATAAAATGGTGAGTGGATT---TAGTGTAAAAAATTTTGATAAGGCAGAACAATAACTACGATTATTATAATT-----------------------------------
SizeHit CountTotal Norm
240 scf7180000302386:295000-295097 - 41.59
ATTTGTTTTCGGTTGTTTTCT-TATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTATTTACTTACTTTTATTATTT----ATTTAAAA-------T--GTAATATCTCATCCTATAATGTTAGAGAAATGTGAAATGTATTATAAACATTTAATGACATA------------------------------
SizeHit CountTotal Norm
222 scf7180000302168:180606-180715 - 41.48
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTATCATCTCGATCGAT-----------------AACCTTCCAAGTAGCATC---AGAGTTTTCTGATGGTCCATATG----------ATAGGCAGACACTCCTTTTTTGTGGCGGAGTAGTTCTCCTCTGCGGCGGTGA
SizeHit CountTotal Norm
4 scf7180000297113:3208-3304 + 40.58
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATC----------------------TTTGCATGTTTAATTATAAAATCTTTATGTATTGGCCTATTTTGGCGAATACATTTGTAAGATTTATCAAAGATGTCTTTTATTCCACGGATAT---------------------
SizeHit CountTotal Norm
10 scf7180000297182:31601-31693 + 40.43
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATGAACTTT---TTGTTCTTTGTTTTTAATATTTGAAATTATTAAATATTATCATTATTTTCTATAACAATTACTGTATATG--G-TCGTGACCTGTTT-----------------------------------------
SizeHit CountTotal Norm
49 scf7180000301028:5851-5932 + 37.31
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGT--AACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTCTTGTTTCCTTAATTTTGTATATAAAATGGTGAGTTGA------------------------ATTAGTGTAAAAAATTATAATTACGATTATGAT------------------------------------
SizeHit CountTotal Norm
57 scf7180000301237:8237-8316 + 35.51
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATT---TATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A------------------------------TACAAAATTCAGAACTAATTAAAAAATGTTATTTACAAGTGTAGGAAGTTATAAGTTAAAACCCCAATGATATAATTTT---------------------------------
SizeHit CountTotal Norm
81 scf7180000302043:11710-11761 + 27.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTCTTGTTTTCTAAATTTTGTATATAAAATGGTGAGTGGAGTA----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
114 scf7180000302475:21189-21251 + 27.11
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTTCTCTGTTGTTATTTATTTATTTTTATGATTTGAAATGAAATTGATTAACGTAAATTATA-----------------------------------------------------------------------------
SizeHit CountTotal Norm
15 scf7180000297483:13496-13546 + 26.81
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTGTTTTTTTCTTGTTTTTTAATTTTTGTTTATAAAATGGTGAGTGGATT-----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
44 scf7180000300679:1217-1261 + 23.91
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
------------------------------------------------------------------------CAAAATTGTTTCTCACTTAATCCACTTATCATTTTATATACAAAA-----------------------
SizeHit CountTotal Norm
7 scf7180000297173:754-800 + 19.57
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTTCGTATTAGTAATTTACCTATTTTTTTTAAGCAAATCTTCGATG---------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
226 scf7180000302217:38463-38490 - 13.29
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTAGTTTTGGCAAGATTT-TTATTTTGG---------------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
225 scf7180000302217:37483-37502 - 7.97
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATCCTCGGCGGGCTGTCTCG------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
None


droTak1 - 11 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
111 scf7180000415873:9535-9670 + 53.62
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATA--AAA-TTATAAATGGGTT-----------ACATAATGTTATAT------AATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTCTGTACTCTTTTGTGTATCTTCCTTTGGTTTTACATATTTTACAATAAGTTTTCTTGGTATGCTCTTAAATTTATACAATAACAAAGGTTGTTAAAGTGATTATTTGGAATACATT-ATAATAT-----------------------TTTGTGTGTGA
SizeHit CountTotal Norm
227 scf7180000415896:18330-18456 - 49.82
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTTCCTTCATATATTTTGTTGTTTTAAAAAATACAATTATAAATTGTATGTCAACTATTTTTTTAGACT---TAGGGTGGTCATATATA---TTTTTCTTTTTTTTTTTGTTAAAATGTTGATTTTTAAAG-------
SizeHit CountTotal Norm
37 scf7180000412634:8048-8197 + 49.35
ATTT----GTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCAT----------TTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATCCTATTTCTTTCTGTCTTTTTCTGCTTTTCACTTTTAAAACATGGTTTGATGTAAACAGGCTTGTATAACAAAATCTTAAAATATATATTTAAACCCATGCAGAGGGAATTATAATTTAGTCCAG-AAGTTTGTTACGCAGTAAAGGAG---
SizeHit CountTotal Norm
128 scf7180000411158:15007-15125 - 48.55
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAA-TTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
T-TTGCCTCCGGCGCTTTTCTTCACTACGAATACTTAACTTCTACCACATTACTCATCGCTAAATTATTCTACACAACTGATTACTATATTGCCTCTATGTTACTCGCATTTACAAGTAT---------------------
SizeHit CountTotal Norm
203 scf7180000415385:1583-1683 - 42.22
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTATTTATTGTCATTTCATTTTTAGAAATTTCAATAATTTATATTTTATAAATCATTTTATATCTTACCGCAGGAATCAACAGTTTGTATTTAATCTAT---------------------------------------
SizeHit CountTotal Norm
100 scf7180000415480:2948-3028 + 33.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATA------AATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTTGTTTACTTTTGCTCTCATAGGTGCTAATATAAACATTTAAATTTAAATTGGT----------------------CATAA-ATCATAATTTTTAAACCATT------------------------------------------
SizeHit CountTotal Norm
223 scf7180000415801:85238-85306 - 31.88
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAA------TTATAAATGGGTTA--CATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTTGTTTACTTTTTCTCTCTTAGGTGCTTATAAAAACATTTAAATTTAAATTGGTCAATCATAATTTT-------------------------------------------------------------------------------
SizeHit CountTotal Norm
5 scf7180000410592:32298-32345 + 22.46
ATTTGTTTTCGGTTGTT---TTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTGTACTCTTTTGTGTATCTTCCTTTGGTTTTACATATTTTAAA-----------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
164 scf7180000414033:4418-4438 - 8.7
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTCTCGGCGGGCGGTCT-----------------------------------------------------------------------------------------------------------------------CGA
SizeHit CountTotal Norm
None
168 scf7180000414134:6918-6937 - 7.97
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTCTCGGCGGGTGGTCTCG------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
None
49 scf7180000413167:864-871 + 3.62
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
------------------------------------------------------------------------------------------------------------------------------------GAGAGTAG
SizeHit CountTotal Norm
None None


droEle1 - 11 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
155 scf7180000491055:5756-5897 + 61.9
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTAT--ATAATGCTACATAAATGTATAATATGTAACCCATTTATAATT---TTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTCTTCTTAATTTTGTATATAAAAAGGTAAGTGGATTTAGTGATAAAATTGTTGATAGGACAAGA-AAAATAATAAGAACAATAATTATAATTATTATAATTACGTAAAGAGTGGTATTATCAG--ATGAA
SizeHit CountTotal Norm
22 scf7180000486856:8419-8562 + 60.22
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGG-----GTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTTAATTTTGTATATAAAAAGGTAAGTGGATTTAGTGACAAAATTGTTGATAGGACAAGAAAAATA-ATAAGAACAATAACTACAATTATTATAATTACGTAAAGAGTGGTATTATAAAATAGTGA
SizeHit CountTotal Norm
138 scf7180000490864:6666-6814 + 55.57
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGG-----TTACATAATGTTATATAATGCTACATAAAT-----GTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTCTTGTTTTCTTAATTTTGTATATAAAAAGGTAAGTGGATTTAGTGACAAAATTGTTGATAGGACAAGAAAAATAATAAGAACAATAACTATAATTATTATAATTACATAAAAGGTGGTA-TTATCAGATGAATAAATTA
SizeHit CountTotal Norm
117 scf7180000490620:2758-2906 + 55.57
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGG-----TTACATAATGTTATATAATGCTACATAAAT-----GTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTTAATTTTGTATATAAAAAGGTAAGTGGATTTAGTGACAAAATTGTTGATAGGACAAGAAAAATAATAAGAACAATAACTACAATTATTATAATTACGTAAATGGTGGTA-TTATCAGATGAATAAATTA
SizeHit CountTotal Norm
48 scf7180000488602:2979-3088 + 47.26
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTA--------------TCCTCTGAGGGAGTGA
GTTGATTTTTTA---TTTTATTATTTAATAATAAAATTTTATTATTTATTTATTAAAAAT-----------------------------------------AATTTAATAAAAATAAATATTTAACACCTCTTCGATACCAACCAAATAAATAC
SizeHit CountTotal Norm
268 scf7180000490230:18703-18786 - 39.86
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTA-TAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A------------------------------TACAAAATTGCTAAGTGAGTGACTTAAGCGTAAAAAAACGAACATATTAAAACGGAATCTGACCCAATTATAAATTTATATAC---------------------------
SizeHit CountTotal Norm
227 scf7180000488520:8964-9142 - 35.2
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTAT-------------------------------------ATAAAATTATAAATGGGTTACA-TAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGA------AAATACTTATCCTCTGAGGGAGTGA
TTTTGTTTCAAATTCAATTCATTTCTTTATGTTTCTCTTGTCACCAAAACCTATAAAATGTATTAATCTACAAATCTTAAAATGAGTGTTGTTATTGTAACGTAATGTAATGTAAATGTACTTCTAGT-----ACTTAAGTTTTATTGTACGAATCACAAAGTACTTAAGTTTTAATGTAACAA
SizeHit CountTotal Norm
338 scf7180000491246:1328-1422 - 34.7
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTTTCAAATTCAATTCATTTGTTT----------------------------ATGTTACTC-ATGTCACAAAAACCTATTAAATGTAT-CAATTTATAAAAGTTAAAATGAGTATTCTTAT---------------
SizeHit CountTotal Norm
107 scf7180000490495:522-595 + 27.8
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTAGTAGTGCGGTACAATTCTTATTTGTAGAAATTAAATTCCAAAGAAATG-------AAGATAAACTGCTTTTTAAATAT-----------------------------------------------------------
SizeHit CountTotal Norm
23 scf7180000486984:40319-40356 + 20.29
ATTTGTTTTCGGT----TGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AATTGTTTTAGGTTTATTGTTTGTTTATTCTTCATATA-----------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
223 scf7180000488370:42790-42816 - 14.49
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTCTTTTCCTTTTCTTTTTTATTTT-----------------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
None


droRho1 - 23 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
292 scf7180000762627:316-437 - 56.83
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGT-----TATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATT---TTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTTTAAATTTTGTATATGAAAAGGTAAGTGGGTTTAG---TGTACACATTTTTGATAGGACA-AGAAAAATAATAAGAACAATAATTACAATTATTATAATTACAAAAA----------------------
SizeHit CountTotal Norm
126 scf7180000773634:3184-3324 + 55.83
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACAT-----AATGTTATATAATGCTACATAAATGTATAATATGTAACCCA-----TTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATATTTTGCTTGTTTTCTAAATTTTTTATATAAGAAGGTAAGTGGATTTAGTGTAAAAATTTTGGACAGGACAAGAAAAATAATAAGAACGATAACTACTAATATTGTAATTATGTAAAGTG-TGTTATTATTTTCTGA--------
SizeHit CountTotal Norm
84 scf7180000770763:28932-29057 + 52.17
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAA----ATGTATAATATGTA---------ACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTAAATTTTGTATATAAAAAGGTAAGTGGATT---TAGTGTAAAAAAGTTTGACAGGACAAGAAAAATAATAAGAACGATAACTACTAATATTATAATTATGTAA------------------------AGTGT
SizeHit CountTotal Norm
276 scf7180000760450:593-725 - 50.87
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAA--------------ATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTTTTTACTCCCGTAGCCTCGCATTCGTATATTGTTTTCTTTTTCAAGCGGAATGGGTCGTCCATTTGATGCAATATTTT----CATATTTATTTATTATTATGTACATATATTTTTTTGTA-------TTATTTACGCTCT----------
SizeHit CountTotal Norm
193 scf7180000777494:8554-8690 + 49.98
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAAT---------TATAAATGGGTTACATAATGT-------TATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTT--TATATACGAAAATACTTATCCTCTGAGGGAGTGA
TATTAGTTTCAATTTTTTTCTTATTTTTACAAATTATTTTTCCTTCCTTTTAAAAAAATTGTCTAATTTAGGCCGTCTTCTTGTACAGCTCAAACTTACAAT----------TTCATAATATAATATATAGTAACATACCCACACCC-----------
SizeHit CountTotal Norm
396 scf7180000774430:705-837 - 45.55
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTAC------------------ATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTACTATAAAATTTAATTTAGTTACTATAAAAAAAATTTTGCATGCAA-------------------CTATTTCCTTTTTTTGTTTTTTGTTTAATTTAAATATATACATACTAAAAAAAATTGTGCATGCAACTATTTAATTTTTTTGG------
SizeHit CountTotal Norm
4 scf7180000760111:6445-6544 + 43.77
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
T-----------------------------ATACAACAA-TTAAATGTGATAATTATTGTTTTAAAGTTACATTTATTTTGATAAAATGTTAAATACAAAGATTATTATTTAGATAGTTGCTTATCCTTT----------
SizeHit CountTotal Norm
226 scf7180000778477:1660-1766 + 41.3
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATA---------TAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
CATTATTGACGGCTAGAGGTTTATTTTTGGATAAAAAATTAATAATTAATGCCAAAATACCATTGTTTGGTAGACATGCTTCAGTACTATATGAAATTTGTCCAGTT------------------------------------------
SizeHit CountTotal Norm
23 scf7180000761740:42-130 + 40.4
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A-----------------------------------AACTATATATGCCTGTTAATTAATTATATGAAGCTTTTTGATTTTTTCATTTAATACCAATTTTTAATTTTGAAGATATGAATGCATA----------------
SizeHit CountTotal Norm
439 scf7180000777087:4500-4577 - 37.47
ATTTGTTTTCGGTTGTTTTCTTA-TTTTCGTATATAAAATTATAAATGG-GTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTTAATTTTCTTAAAAAGAACAATAATTACAATTAC---------TATAAT--TACA-AAAAGTATGGTAT----------------------------------------------------
SizeHit CountTotal Norm
372 scf7180000772722:681-763 - 36.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-------------------------------TATACAATTAATAAAAAACCGGTACATTTTTCAGAAAGCTACCTAAATATGTCAGTTTTTACATATGTGTATTTATATATACG--------------------------
SizeHit CountTotal Norm
73 scf7180000769435:645-722 + 34.83
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATGAGTTTT-GGTTGATTTTTTTTT-----GATTCGCAGTGTAATTTTGTTTAATGTTGTTATTTAATGATCTAGTTATATATA--------------------------------------------------------
SizeHit CountTotal Norm
247 scf7180000779642:13800-13880 + 34.24
ATTTGTTTTCGGTTG------TTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATATTTCTTTGTTTGTTGTTTTCTTATTATTTTTCTAAACAAAAACATAGGTGTATT---TGGATTTACATATTTTAAAATAAA--------------------------------------------------------------
SizeHit CountTotal Norm
17 scf7180000761621:2356-2418 + 32.61
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTAAGTTTTGTATATAAAAAGGTAAGTGGACTTATTATTATTAT-----------------------------------------------------------------------------
SizeHit CountTotal Norm
161 scf7180000776594:2568-2618 + 28.99
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTAAATTTTGTATATAAAAAGGTAAGTGGGTT-----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
103 scf7180000772235:6107-6157 + 28.26
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCTTGTTTTCTAAATTTTGTATATAAAAAGGTAAGTGGATT-----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
168 scf7180000776685:4974-5025 + 26.81
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAA-TTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTGCGTGATTTCTAAATTTTGTATATAAAAAAGGTAAGTGGATT-----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
110 scf7180000772939:12081-12138 + 26.09
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
----------------------------------------------------------------------TATATTAATGCATAACACTGAGTACAGTGTGCATTCGATATGTGAACATACTTATTTT------------
SizeHit CountTotal Norm
222 scf7180000778242:3164-3220 + 25.36
ATT------TGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTTCTTTGTTTTTGGTTTTCTTACTATTTTTCTAAACAAAAACATGGGTGTATT-----------------------------------------------------------------------------------------
SizeHit CountTotal Norm
171 scf7180000776848:2258-2318 + 22.46
ATTTGTTTTCGGTTGT-------------------TTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTTGGCTTGGTATGATTGTGCGTTGTTAGTTCCTGTTTTACATATGTAAAATTGT--------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
113 scf7180000773222:24632-24673 + 21.44
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AGATGAT--TAGTTATTTTCCTTTTTTTATATATAAAATATTAA------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm


droKik1 - 9 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
217 scf7180000301889:2472-2603 - 58.76
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTT-------------ATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATAATGTTTTGATTGTTTTCTGAATTTTGTATATAAAAGAGTAAGTGGCTTTTTTTTTATTTATTTATTTATTTATTAAGAATAGCAAATATCTGCCATTTTAAATCCATA---------------------TCCTTTCCTCAGACCGGATAA
SizeHit CountTotal Norm
146 scf7180000299334:825-971 - 52.84
ATTTGTTTTCGGT--TGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACAT------------AAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGA-G-TGA
ATATATTTTATCTAACATTATGTTATTT----ATATAAATATATAAATATTTAATAAATTATTATATATTTAAATATTAATATATGTATAAATATATAAATATTAATTTAATTAT-----TATATATTTATATATTATATATATAAAATAATTTAT
SizeHit CountTotal Norm
54 scf7180000301368:1794-1916 + 51.71
ATTTGTTTT-CGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATATTTATTTTGCATGCGTTTTTATTTAT-TAATCGTAGTTATTAGTTAGTTACATAATATTATACTTTTTTATATTTA--TTTTGCATGCGTTTTTACTTTTACTTTACTTATATATATATGTTC---------------
SizeHit CountTotal Norm
162 scf7180000300216:969-1089 - 49.28
AT--TTGTTTTCGGTTGTTTTCT-TATTTTCGTATATAAAA--TTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AATGTTGTATTAAAATGTTGTTTAAAATTTTGTATGTAAATGTATGTGGATGGGGAAAAAAATATAATATGGAATAATATATGTATGTTTTATATGGCGGAAATATAAGTACGTATATGGA------------------------
SizeHit CountTotal Norm
141 scf7180000299277:574517-574635 - 48.89
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTGTATTAAACTAAGATTTCATTTTCCCTAGTAATTATTTA------TTAATTAATTATGTATATTATTATATATTTATATTAAATATTATTTATATTTATATTTATATATATTTATATTTAT---------------
SizeHit CountTotal Norm
64 scf7180000301625:4645-4755 + 44.76
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTATTTTTGTTTTTAACAATTTTAACTTGAACTTATTAGTAAATACATTAGATATATAAACTAATTATAAAATAACTGTTTATAAAATAAATATTTTATAATCTTAGAT-----------------------------
SizeHit CountTotal Norm
136 scf7180000298720:39-145 - 41.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTATTTTCGATAATTTTATTATTTTGTTAAATTATTTTA--TTCGGCTTTATTATATTTATTTTATTTGACTTTATTAT--------------ATTTATTATTTTA-----------------TTATTTATTTAGTGT
SizeHit CountTotal Norm
71 scf7180000301776:13892-13933 + 20.29
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTCATGTTCTTTTCTTTTCTTATTTAGTTTTTTAATTTTAT--------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
247 scf7180000302693:6886-6918 - 16.67
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTTGTGTTCTAGTGTTGTGTTATTTGTGTTTA-----------------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm


droAna3 - 36 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
324 scaffold_13079:304244-304384 - 58.72
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTT------ACATAATGTTATATAATGCTACATAAATGTAT------AATATGTAACCCATTTATAATTTTATA---TACGAAAATACTTATCCTCTGAGGGAGTGA
ATTGTCTTTTACTTGTTTTCTTAGTTTTTTATATAAAAAGGTAAGTGGATTTAAAGTAAAGAATTT--TGAAAGGACAAATAAAATAATAATAACAATAACTAAAATTATTATAATTATATAATTTGTG----GAATTATTTTCTGA--------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
....................................AAAGGGAAGTGCATTT.......................................................................................................1650.200.000.000.200.00
............................................GTGGATTTGAAGxAAAGAA............................................................................................1820.500.000.000.000.50
.........................................................AAAGAATTT--TGAAAAGAGA.............................................................................1920.500.000.000.500.00
119 scaffold_13137:102576-102716 + 58.21
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGT-TA----------------------------------------------TATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTGTTTTCTAAATTTTGTATACAAAAATATAAATGGATTAAA----GTTTATGTACTTTAGAATAAAAATCATTGCGAACTAAGCCAGAATAGCCAGTATA-------ATAATTGTATAAAGTGTGA------TATTATTTT-----------------------------GTGA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...........TTTGTTTTGAAAATTTTGT.............................................................................................................................................................1920.500.000.000.000.50
................................................................................................................A-------TTAATTTTATAAAGTGT..................................................1820.500.000.000.500.00
..........................................ATATGGATTAAA----GTTTAGGTA........................................................................................................................21140.070.070.000.000.00
........................................................................................GAACTATGCCTGAATAG..................................................................................1711.000.000.001.000.00
........................................ATGAATGGATTAAA----GTG..............................................................................................................................17150.070.000.000.070.00
......TTCAGTATGTGTTCTAAAT..................................................................................................................................................................1911.000.000.000.001.00
..............................................................................................................ATA-------ATAATTTGATAAAGTGT..................................................2020.500.500.000.000.00
..............................ATACAAAAAGATAAAGGGA..........................................................................................................................................19130.080.080.000.000.00
152 scaffold_13260:467098-467238 + 57.65
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTAC------ATAATGTTATATAATGCTACAT--------------AAATGTATAATATGTAACCCATTTATAATTTTATA---TACGAAAATACTTATCCTCTGAGGGAGTGA
ATTGTCTTTTACTTGTTTTCTTAGTTTTTTATATAAAAAGGTAAGTGGATTTAAAGTAAAGAATTTTG----------AAAGGACAAGAAAAATAATAAGAACAATAACTAAAATTATTATAATTACATAATTTGTG----GAATTATTTTCTGA--------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
................................................................TTTG----------AAAGGAAAAGAAAAAG.....................................................................2011.001.000.000.000.00
....................................AAAGGGAAGTGCATTT...............................................................................................................1650.200.000.000.200.00
............................................GTGGATTTGAAGxAAAGAA....................................................................................................1820.500.000.000.000.50
.....................................................................................AAGAAAAATAACAAGAAA............................................................1840.250.000.000.000.25
.........................................................AAAGAATTTTG----------AAAAGAGA.............................................................................1920.500.000.000.500.00
64 scaffold_12911:826049-826182 + 56.99
ATTTGTTTTCGG---TTGTTTTC------------TTATTTTCGTATATAAAATTATAAATGGGTTACATAATGT-TATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTTTTTCCACAGTTATATTTTGAAACGTGTAATTATATATATATATACCA-TATATATATAATATATAATATATATATAATATATTATATATATATAATATATAATATAT----AA---TATATATATATATAATTAAC--------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
148 scaffold_13250:1786194-1786325 + 56.46
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGA---------------------------------GTGA
ATTTCTTTCAGTTTGTTTTCTTAATTTTGTATACAAAAATATAAATGAATTAAA-----------------------------------------GTTTATGTACTTAAGAATAAAAATTATTGCCACCAAAGCCAGTATAATAATTGTATAAAGTGTGATATTGTTTTGTGA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.............TGTTTTCTTAATTTTxTATACT..........................................................................................................................................2150.200.000.000.000.20
..........................................................................................................................................ATAATAATTTGATAAAGTGT...............2020.500.500.000.000.00
............................................................................................................................................ATTAATTTTATAAAGTGT...............1820.500.000.000.500.00
98 scaffold_13079:518760-518887 + 52.4
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAAT-GTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATGTCTTCGCGGTGGTTCTCTTATTTCTTTATATGAAGCAATATTTTAG-CACCCGCGAATATGCTATGGTAGCAAACCGCCGCGGTGGGTAATTACTTCATTATTTTAT-TAC-AACACACCTATTTCCT----------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
............................TTATATGAAGCAATATTTTAG-CACCCGC....................................................................................2813.000.000.000.003.00
..........................................................AATATGCTATTGTAGCAAACCGCCCCGG.......................................................2811.000.000.000.001.00
..........................................................AATATGCTATGATAGCAAACCGCCGCG........................................................2711.001.000.000.000.00
...............................TATGAAGCAATATTTTAG-CACTCGCGGA.................................................................................2811.000.000.001.000.00
.TGTCTTCGCGGTGGTTCTCTTATTAC..................................................................................................................2611.000.000.000.001.00
..............................................................................................................................TTCTT----------21230.040.000.000.000.04
.................................................................TATGGTAGCAAACCGCCGCGGTGG....................................................2411.000.000.000.001.00
............................................................................................................................ATTTCTT----------18110.090.000.000.000.09
............................................................TATGCTATGGTAGCAAACCGCCGCGG.......................................................2611.000.000.000.001.00
.........................................................GAATATGCTATGGTAGCAAACCGCCGCC........................................................2811.000.000.000.001.00
............................................................TATGCCATGGTAGCAAACCGCCGCC........................................................2511.000.000.000.001.00
.................................................................TATGATAGCAAACCGCCGCGCTGG....................................................2411.000.000.000.001.00
............................................................................................................................ATTTACT----------2080.130.000.000.000.13
76 scaffold_12947:120428-120544 + 49.23
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTAT---ATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATA------ATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTT-------------------------TCTGTGGTAATAGCGTACGCAGGT---ATATTGTTGTGTAGTGATCCGTCAGTATAAATAAATGTAAAGTTGCACATTTTTGATTTTATGTCTAAAAATTCTTTTC---TG-AATAATGA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
............................................................................................................TTGATTTTAGCTCTAAAA.......................1811.000.000.000.001.00
.......................................................................GATCCGTCAGTATAAATAAATGTGA.....................................................2511.000.000.000.001.00
...........................................................................................................TTTGATTTTATCTCTAAAAT......................2011.000.000.000.001.00
...........................................................................................................TTTGATTTTAGCTCTAAAA.......................1911.000.000.000.001.00
..............................................................TTGTAAAGTGATCCGTCAGTATAAATA............................................................2711.001.000.000.000.00
...................................................................TAGTGATCCGTCAGTATAATTAAATG........................................................2611.000.000.000.001.00
...............................................................TGTGTAGCGATCCCTCAGT...................................................................1911.000.000.000.001.00
............................................................................................................TTGATTTTATCTCTAAAAT......................1911.000.000.000.001.00
.............................................................................................................TGATTTTATCTCTAAAAT......................1811.000.000.000.001.00
...........................................................................................................TTTGATTTTAGCTCTAAA........................1811.000.000.001.000.00
99 scaffold_13082:148213-148342 + 47.83
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGT--GA
TT------------GTTTTTTTTTTTTCACGACTACGATTTTAAACTGGGATCTTCTTTGCCCAGATCGCAGCCTTATTTTATGCCTATTGGCACTTTTATAGTTTAATTTTCTGTGTTCTTTACCTCTTGGGGGAAACGAC
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGGAA....27174.000.000.000.0074.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGAA.....26165.000.000.000.0065.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGAAA....27163.000.000.000.0063.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGGA.....26149.000.000.000.0049.00
...............................................................................................................TCTGTGTTCCTTAGCTCTTGGGGG.......24122.000.000.000.0022.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGA......25115.000.000.000.0015.00
...............................................................................................................TCTGTGTTCCTTAGCTCTTGGGG........23114.000.000.000.0014.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGTGGGAAA....27110.000.000.000.0010.00
......................................................TTTTTGCCCAGATCGCAGCCTTATAT..............................................................2617.000.000.000.007.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGG......2516.000.000.000.006.00
...............................................................................................................TCTGTGTTCCTTACCTCTTTGGGGA......2516.000.000.000.006.00
...............................................................................................................TCTGTGTTCCTTACCTCTTTGGGGAA.....2616.000.000.000.006.00
......................................TTTTAAACTGGGATCTTTTTTGCC................................................................................2415.000.000.000.005.00
...............................................................................................................TCTGTGTTCCTTAGCTCTTGG..........2115.000.000.000.005.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGTGAAA....2715.000.000.000.005.00
.................................................................................................................TGTGTTCCTTACCTCTTGGGGGGAA....2515.000.000.000.005.00
..............................................................................................................TTCTGTGTTCCTTACCTCTTGGGGGAAA....2815.000.000.000.005.00
..........................................................TGCCCAGATCGCAGCCTTATATTATG..........................................................2615.000.000.000.005.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGTGGAAA....2714.000.000.000.004.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGCA.....2614.000.000.000.004.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGGTAA....2714.000.000.000.004.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGTGGAA.....2614.000.000.000.004.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGGG.......2414.000.000.000.004.00
.................................................................................................................TGTGTTCCTTAGCTCTTGGGGG.......2214.000.000.000.004.00
.................................................................................................................TGTGTTCCTTACCTCTTGGGGGG......2314.000.000.000.004.00
...................................................TCTTTTTTGCCCAGATCGCAGCCTTATAT..............................................................2914.000.000.000.004.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGTGA......2513.000.000.000.003.00
.................................................................................................................TGTGTTCCTTACCTCTTGGGG........2113.000.000.000.003.00
.................................................................................................................TGTGTTCCTTAGCTCTTGGGG........2113.000.000.000.003.00
...............................................................................................................TCTGTGTTCCTTACCTCTTTGGGGAAA....2713.000.000.000.003.00
..........................................................TGCCCAGATCGCACCCTTATTTTATTC.........................................................2713.000.000.000.003.00
..........................................................TGCCCAGATCGCAGCCTTATATTATGCC........................................................2813.000.000.000.003.00
................................................................................................................CTGTGTTCCTTACCTCTTGGGGGAAA....2613.000.000.000.003.00
...............................................................................................................TCTGTGTTCCTTACCTCTTGGGTGAA.....2613.000.000.000.003.00
...................................................TCTTTTTTACCCAGATCGCAGCCTTA.................................................................2613.000.000.000.003.00
299 scaffold_12943:197669-197795 - 47.77
ATTTGTTTTCGGTTGTTTT------------------CTTATTTTCGTATATAAAATTATAAATGGG----TTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TCTTTTTTTTTTTTTTGTTTTTATTTGTTTTATTTTTTTTTTTTTTTTATGTATGGCCATACGTGATATATTTATAGAATGTTGATTGATG----------ATGAAATAAAAAGTTTTAATCTATCTTTATGTACTA-------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...........................TTTTTTTTTTTTTTTTTTTTT..................................................................................................................21360.080.000.030.000.06
.........................................................CATACGxGATATATTTATT......................................................................................1812.001.001.000.000.00
...............................ATTTTTTTTTTTTTTTTT.................................................................................................................18370.050.000.050.000.00
............................TTTTTTTTTTTTTTTTTTTT..................................................................................................................20470.040.020.020.000.00
...........................TTTTTTTTTTTTTTTTTTTT...................................................................................................................20470.040.020.020.000.00
..TTTTTTTTTTTTTTTTTTTT............................................................................................................................................20470.040.020.020.000.00
........................TTCTTTTGTTTTTTTTTTTTT.....................................................................................................................21230.040.000.000.000.04
.........................TTTTTTCTTTTTTTTTTTTTTTT..................................................................................................................23270.040.000.040.000.00
......................ATTTACTTTATTTTTTTTTT........................................................................................................................2080.130.000.000.000.13
.......ATTTCTTTTGTTTTTATT.........................................................................................................................................18110.090.000.000.000.09
........................TTTTTTTATTTCTTTTTTTTT.....................................................................................................................21180.060.000.000.000.06
...................................................................ATxTTGATAGAGTGTTGATTGA.........................................................................2111.000.000.001.000.00
......................ATTTTTTTTATTTTTTATT.........................................................................................................................19270.040.000.000.000.04
...TTTTTTTTTTTTTCTTTTT............................................................................................................................................19130.080.080.000.000.00
...............................ATTTTTTTTTTTTTTTTTT................................................................................................................19240.040.000.040.000.00
.CTTTTTTTTTTTTTTTTT...............................................................................................................................................18320.030.000.000.030.00
............................GTTATTTTTCTTTTTTTT....................................................................................................................18160.060.000.000.060.00
232 scaffold_8884:350-488 - 45.63
ATTTGTTTTCGGTTGTTTTCT----------------TATTTTCGTATATA-----AAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTCTAGCGGTTTTTCGCGCTAACAGTGACGATTTTCTATCCGTATTTATCGCTAAATTAGCAATGAATTTCTGGCGGTTTT-TCGCGCTA---------------------ACAGTGATGATTTTCTAGCCGTTATTATCGACCCCGGGAGAGAGCGA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..............................................................................................................................TTCTAGCCGTTATTATCGAGTCCGG..........2516.000.000.000.006.00
...............................................................................................................................TCTAGCCGTTATTATCGAGTCCGG..........2414.000.000.000.004.00
.....................CTAACAGTGACGATTTTCTATCCG....................................................................................................................2431.000.000.670.000.33
ATTTTCAAGCGGTTTTTAGCG............................................................................................................................................2121.501.000.000.000.50
280 scaffold_12373:4165-4326 - 44.38
ATTTGTTTTCGGTTGTTTTCT-TATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATA-ATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAAT-----ACTTATCC-------------------TCTGAGGGAGTGA
TCTGCTATTTGGTTTTCTACTTCATTGTCATAAATATAAGGATAAG-----TATATGGTCTTCTATAAATGGGATCTTCATGTTTAGTTTTTATTTTATGTTTGATTTCATTTGCGAAGGTCAAATTGTCACCCTCATGCCCCGGAGGACCCTCCTCGTCGATTGG
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
................................................................ATAAATTGGATCTTGATGT...................................................................................1912.000.002.000.000.00
...................................................TATATGGTCTTCTATAAATGGGA............................................................................................2312.000.000.000.002.00
.......................................................................................................................................CATCACCCGGAGGACCCTCCTCGT.......2411.000.000.000.001.00
..................................................................................................TGTTTGATTTCATTTGTGAACGTC............................................2411.001.000.000.000.00
................................................................................................................TGTGAAGGTCAAATTGTCA...................................1911.000.001.000.000.00
..................................TATAGGGATAAG-----TATATGGTCTTC.......................................................................................................2411.001.000.000.000.00
..............................................................CCATAAATGGGATCTTCGTGT...................................................................................2111.001.000.000.000.00
..........................................................................................................................................CACCCGGAGGACCCTCCTCGTCGA....2411.000.000.000.001.00
....................TTCATTGTCATAAATATAGGGATAAG-----...................................................................................................................2630.330.330.000.000.00
......................................................ATGGTCTTCCATAAATGGGA............................................................................................2011.000.001.000.000.00
..................................................................AAATGGGATCTTCGTGTTTAG...............................................................................2111.001.000.000.000.00
...........................................................................................TATTTTxTGTTTCATTTCATT......................................................2011.000.001.000.000.00
.....................TCATTGTCATAAATATAGGGATAAG-----...................................................................................................................2530.330.330.000.000.00
..............................................................................................................TTTGTGAAGGTCAAATTGTCACCCTCA.............................2711.000.001.000.000.00
...........................................................................................................................................CCCCGGAGGACCCTCCTTGTCGC....2311.000.000.000.001.00
........................................................................................................................................ATCACCCGGAGGACCCTCCTCGTCGA....2611.000.000.000.001.00
366 scaffold_13228:547944-548018 - 39.72
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTGTTTTCTTAATTTTATATATAAAAATATAAATGGATTAA-----------------------------------------------------------------AGTTTATGTACTTAAGAATAAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..........................................ATATGGATTAA-----------------------------------------------------------------AGTTTAGGTA............21140.070.070.000.000.00
........................................ATGAATGGATTAA-----------------------------------------------------------------AGTG..................17150.070.000.000.070.00
......................AATTTTATTTATAAGAATA...................................................................................................1911.000.000.001.000.00
107 scaffold_13099:1171876-1171950 + 39.72
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTGTTTTCTTAATTTTATATACAAAAATATAAATGGATTAAA-----------------------------------------------------------------GTTTATGTAATTAAGAATAAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.............TGTTTTCTTAATTTTxTATACT.........................................................................................................2150.200.000.000.000.20
..........................................ATATGGATTAAA-----------------------------------------------------------------GTTTAGGTA............21140.070.070.000.000.00
...........................................AATGGAxTATA-----------------------------------------------------------------GTTTATGTAAT..........2111.001.000.000.000.00
........................................ATGAATGGATTAAA-----------------------------------------------------------------GTG..................17150.070.000.000.070.00
..............................ATACAAAAAGATAAAGGGA...........................................................................................19130.080.080.000.000.00
374 scaffold_13250:1363853-1363951 - 39.46
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGT-ATAATATGTAACCCATTTATAATTTTATATACGAAAATACT-TATCC----TCTGAGGGAGTGA
-------------------------TTCGTATGAGAACTGCTAAATGGGATTGAAAATCATCTGTAACAATACACAAATCATC----------------------TAAATATCCGAAAACACAGTATCGTAGATCTGGTGGAATAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...................................GACTGCTAAATGGGATTGAAAATCATC....................................................................................2711.000.000.001.000.00
..................................................TTGAAGATCATCTGTAACAAT...........................................................................2111.001.000.000.000.00
..................................................................ACAATACATAAATTATC----------------------T........................................1811.000.000.001.000.00
.............................................................................................................TATCCGAAAACACAGTATCGTAGA.............2411.000.000.000.001.00
..................................................TTTAAAATCATCGGTAACAAT...........................................................................2111.001.000.000.000.00
................................AAGGACTGCTAAATGGGATTGAAAATC.......................................................................................2711.001.000.000.000.00
270 scaffold_11427:995-1103 - 39.14
ATTTGTTTTCGGTTGTT-----------TTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AGCTGTTTTTCGCGCTAACAGTGACGATTTTCTATCCG------------TATTTATCGCTTAATTAGC---------------------GATGAATTTCT--------ATCGGTTTTAGCGCTAAAAATGATGATTTTCTA-GCCGGTTT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..............CTAACAGTGACGATTTTCTATCCG------------.....................................................................................................2431.000.000.670.000.33
.....................................................................................................................TAGCGCTAACACTGATGATTTTCTA-G.......2621.000.000.000.001.00
........TTAGCGCTAACAGTGACGATTTTCTA.....................................................................................................................2640.500.000.000.000.50
........TTAGCGCTAACAGTGACGATTTTCT......................................................................................................................2540.500.250.000.000.25
..........................................................................................GATGATTTTCT--------AGCGGTTTTAGCG.............................2412.000.001.000.001.00
....................................................................................................................TTAGCGCTAACACTGATGATT..............2121.000.001.000.000.00
............CGATAACAGTGACGATTTTCTAGCC..................................................................................................................2530.670.000.670.000.00
............................................................................................TGATTTTCT--------AGCGGTTTTAGC..............................2111.001.000.000.000.00
.......TTTAGCGCTAACAGTGATGATTTTC.......................................................................................................................2540.250.000.000.000.25
.................................................................TAGC---------------------GATGATTTTCT--------AGCGGTTTTAG...............................2611.000.000.001.000.00
................................................................................................................GATTTTAGCGCTAAAAATGATGATTT.............2611.000.000.000.001.00
...................................................................................................................TTTAGCGCTAACAATGATGGT...............2111.000.000.000.001.00
.............GCTAACAGTGACGATTTTCTAGCCG------------T....................................................................................................2640.250.000.000.000.25
........................TGATTTTCTAGCCG------------TATTTATCGCT..........................................................................................2520.500.000.500.000.00
...................................................................................................................TTTAGCGCTAACACTGATGATTTTCTA-........2720.500.000.500.000.00
................................................................TTAGC---------------------GATGATTTTCT--------ATCCG.....................................2111.000.000.000.001.00
..............................................................................................................................CACTGATGATTTTCTA-GCCGG...2120.500.500.000.000.00
................................................................TTAGC---------------------GATGATTTTCT--------AGCGGTTTTAG...............................2711.001.000.000.000.00
.......TTTAGGGCTAACAGTGACGATTT.........................................................................................................................2320.500.500.000.000.00
...............TAACAGTGACGATTTTCTATCCG------------TA...................................................................................................2530.330.000.000.000.33
..................CAGTGACGATTTTCTAGCCG------------T....................................................................................................2140.250.250.000.000.00
..................................................................AGC---------------------GATGATTTTCT--------AGCGGTTTTAG...............................2511.000.000.000.001.00
..................................................TATTTATCGCTAAATTAGC---------------------GATGA........................................................2430.330.000.000.000.33
...................................................................GC---------------------GATGATTTTCT--------AGCGGTTTTAG...............................2411.001.000.000.000.00
...............TAACAGTGACGGTTTTCTATCCG------------T....................................................................................................2430.330.000.330.000.00
.................................................................TAGC---------------------GATGATTTTCT--------AGC.......................................1830.330.000.000.000.33
......TTTTAGCGCTAACAGTGACGATTTCC.......................................................................................................................2620.500.000.000.000.50
.......TTTAGGGCTAACAGTGACGATTTTC.......................................................................................................................2520.500.000.000.000.50
.......TTTAGCGCTAACAGTGATGATTTT........................................................................................................................2440.250.250.000.000.00
...............TAACATTGACGATTTTCTATCCG------------TA...................................................................................................2530.330.000.000.000.33
.............GCTAACAGTGACGATTTTCTATCCG------------T....................................................................................................2630.330.000.000.000.33
.......TTTAGCGCTAACAGTGACGATTTTCT......................................................................................................................2640.250.000.000.000.25
......TTTAAGCGCTAACAGTGACG.............................................................................................................................2030.330.330.000.000.00
...............TAACAGTGACGATTTTCTAGCCG------------T....................................................................................................2440.250.250.000.000.00
...................AGTGACGATTTTCTAGCCG------------T....................................................................................................2040.250.250.000.000.00
...............TAACAGTGACGATTTTCTATC...................................................................................................................2130.330.000.330.000.00
...........................................................................................................................TAAAAGTGATGATTTTCTA-GCCAGTT.2611.001.000.000.000.00
.....................................................................................................................TAGCGCTAACAGTGATGATTTTCTA-G.......2620.500.000.500.000.00
...............TAACAGTGACGATTTTCTATCCG------------T....................................................................................................2430.330.330.000.000.00
...............................................................................................................................AGTGATGATTTTCTA-GCCG....1920.500.000.000.000.50
....................................................................................................................TTAGCGCTAACATTGATGATTTTC...........2420.500.000.000.000.50
...............................................................................................................................AGTGATGTTTTTCTA-GCCGGT..2120.500.500.000.000.00
...........................................................................................................................TAACACTGATGATTTTCTA-GCCGGTTT2711.000.000.000.001.00
...................................................................................................TT--------ATCGATTTTAGCGCTAAAAATGATG.................2711.000.000.000.001.00
...............TAACAGTGACGATTTTCTATCCG------------.....................................................................................................2330.330.000.000.000.33
...............TAACAGTGACGATTTTCTTG....................................................................................................................2030.330.000.000.000.33
...................................................................................................................TTTAGCGCTAACACTGATGATTTTCT..........2620.500.000.000.000.50
......................................................................................................................AGCGATAAAAAAGATGAT...............1811.000.000.001.000.00
...........................................................................................................................TAACAGTGATGATTTTCTA-GCCGG...2420.500.000.000.000.50
..CGGTTTTTAGCGCTAACAGTGACGAT...........................................................................................................................2640.250.250.000.000.00
...GGTTTTTAGCGCTAACAGTGACGATTTT........................................................................................................................2840.250.250.000.000.00
......TTTTAGCGCTAACAGTGACGA............................................................................................................................2140.250.000.000.000.25
...................................................................................................................TTTAGCGCTAACAGTGATGATTTTC...........2540.250.000.000.000.25
........TTAGCGCTAACAGTGACGATT..........................................................................................................................2140.250.000.250.000.00
................AACAGTGACGATTTTCTATCCG------------.....................................................................................................2230.330.000.000.000.33
...................................................................................................................TTTAGCGCTAACAGTGATGATTTT............2440.250.250.000.000.00
...............TAACAGTGGCGATTTTCTATCCG------------.....................................................................................................2330.330.000.000.000.33
...........GCGCTAACAGTGATGATTTT........................................................................................................................2030.330.000.330.000.00
............................TTTCTATCCG------------TATTTATCGCT..........................................................................................2130.330.330.000.000.00
............CGCTAACAGTGACGATTTTCTAGCCG------------.....................................................................................................2640.250.000.000.000.25
.....................................................................................................................TAGCGCTAAAAGTGATGATTTTCTA-G.......2620.500.000.000.000.50
325 scaffold_13079:485580-485654 - 39.02
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTGTTTTCTTAATTTTATATACAAAAATATAAATGGATTAA-----------------------------------------------------------------AGTTTATGTACTTAAGAATAAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.............TGTTTTCTTAATTTTxTATACT.........................................................................................................2150.200.000.000.000.20
..........................................ATATGGATTAA-----------------------------------------------------------------AGTTTAGGTA............21140.070.070.000.000.00
........................................ATGAATGGATTAA-----------------------------------------------------------------AGTG..................17150.070.000.000.070.00
..............................ATACAAAAAGATAAAGGGA...........................................................................................19130.080.080.000.000.00
44 scaffold_9796:4203-4277 + 38.32
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTCTTTTCTTAATTTTATATACAAAAATATAAATGGATTAA-----------------------------------------------------------------AGTTTATGTACTTAAGAATAAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..........................................ATATGGATTAA-----------------------------------------------------------------AGTTTAGGTA............21140.070.070.000.000.00
........................................ATGAATGGATTAA-----------------------------------------------------------------AGTG..................17150.070.000.000.070.00
..............................ATACAAAAAGATAAAGGGA...........................................................................................19130.080.080.000.000.00
150 scaffold_13258:1340989-1341063 + 38.32
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTATTTTCTTAATTTTATATACAAAAATATAAATGGATTAA-----------------------------------------------------------------AGTTTATGTACTTAAGAATAAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..........................................ATATGGATTAA-----------------------------------------------------------------AGTTTAGGTA............21140.070.070.000.000.00
........................................ATGAATGGATTAA-----------------------------------------------------------------AGTG..................17150.070.000.000.070.00
..............................ATACAAAAAGATAAAGGGA...........................................................................................19130.080.080.000.000.00
194 scaffold_13770:474589-474662 + 37.81
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTCTTTTCTTAATTTTATATACAAAA-TATAAATGGATTAAA-----------------------------------------------------------------GTTTATGTACTTAAGAATAAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
........................................ATGAATGGATTAAA-----------------------------------------------------------------GTG..................17150.070.000.000.070.00
..........................................ATATGGATTAAA-----------------------------------------------------------------GTTTAGGTA............21140.070.070.000.000.00
.................................CACAA-TATAGATGGAT..........................................................................................1611.000.000.001.000.00
191 scaffold_13499:457512-457586 + 37.63
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTCTTTTATTAATTTTATATACAAAAATATAAATGGATTAAA-----------------------------------------------------------------GTTTATGTACTTAAGAATAAA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..........................................ATATGGATTAAA-----------------------------------------------------------------GTTTAGGTA............21140.070.070.000.000.00
........................................ATGAATGGATTAAA-----------------------------------------------------------------GTG..................17150.070.000.000.070.00
..............................ATACAAAAAGATAAAGGGA...........................................................................................19130.080.080.000.000.00
74 scaffold_12943:204829-204893 + 35.33
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTGTTTTCTTAATTTTATATACAAAAATATAAATGGATTA-------------------------------------------------AAGTTTATGTACT--------------------------
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.............TGTTTTCTTAATTTTxTATACT.........................................................................................................2150.200.000.000.000.20
..........................................ATATGGATTA-------------------------------------------------AAGTTTAGGTA............................21140.070.070.000.000.00
........................................ATGAATGGATTA-------------------------------------------------AAGTG..................................17150.070.000.000.070.00
..............................ATACAAAAAGATAAAGGGA...........................................................................................19130.080.080.000.000.00


droBip1 - 11 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
31 scf7180000394965:14885-15019 + 58.7
ATTTGTTTTCGGTTGTTTTCTTATTTTCG--TATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATA-ATATGTAACCCATTTATAAT-TT--TATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTAGATTTTTATTTT-ATTTTATTTTTTTATATTTTTTTTTGTATATTTTTTATATAAATATATATAATTTTATATATATATATATATATGTATTTTTTTTATTGTGTACATGTATGTATCTATATTTATTCTTT----------
SizeHit CountTotal Norm
68 scf7180000391857:42344-42467 - 53.35
AT------TTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTGTTTCCTTATTTTTATATGTTTACTTATTTTTATATGTATCTTTATATAATTGTTATATATACATATGTATATGTATATGTATGTGTA----------------------TATGTATGTCCATACGTTTGAATTTATGAAATTA
SizeHit CountTotal Norm
25 scf7180000393620:23215-23279 + 37.4
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTGTTTTCTTAATTTTGTATACAAAAATATAAATGGATTA---AATGTTATGTACT------------------------------------------------------------------------
SizeHit CountTotal Norm
51 scf7180000395863:10299-10370 + 36.96
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATA----ATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTCTTGTTTCCTTAATTTTGTATATAAAATGGTAAGTGAATTTTATAGGACAAGTTAAATAAT------------------------------------------------------------------------
SizeHit CountTotal Norm
114 scf7180000396277:4123-4185 - 35.28
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTTTCAGTTTGTTTTCTTAATTTTGTATACAAAAATATAAATGGATTAA-------------------------------------------------AGTTTATGTA----------------------------
SizeHit CountTotal Norm
126 scf7180000396650:8708-8790 - 34.78
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTAATTGTAATTTTATTTTATTTTTAAAGTTAAAATTATAAGTTATATATGTAAACTCACCTATGA---------------------------------------------------------GCCGCATGACGGTA
SizeHit CountTotal Norm
79 scf7180000393075:8270-8353 - 32.63
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTCTTCTTATTTTCATTCTTATTTTCGTATTCATGCGTTATCATAAGTAACTT---------AGAAGCAACACGACTGTTGAATTTATAAC-----------------------------------------------
SizeHit CountTotal Norm
60 scf7180000396384:3715-3784 + 31.16
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
-----------GTTGTTTTTCCTTTCAAGAAGCTTAAAATATAACTGATATACATCCCACTCTATAATGCCCAATTAATAT-----------------------------------------------------------
SizeHit CountTotal Norm
118 scf7180000396448:34967-35016 - 24.61
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TCAAG-----------------------------------------------------------TA---ATATTAAAAAATATAATATATAATCTATATATATCTATATATA----------------------------
SizeHit CountTotal Norm
43 scf7180000395288:3450-3493 + 18.84
ATT----TGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTTTGTTGTTTTTAATTTTTCTTTAATTTTTATATGTTACACT----------------------------------------------------------------------------------------------------
SizeHit CountTotal Norm
86 scf7180000393620:23236-23265 - 18.12
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A------------------------------------------------------------------------------------------ATCCATTTATATTTTTGTATACAAAATTA--------------------
SizeHit CountTotal Norm


dp4 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
207 Unknown_singleton_1998:3876-4037 - 42.59
ATTTGTTTTCGGTTGTTTTCTTA------------TTTTCGTATAT------AAAATTATAAATGGGTTACATAATGTTATAT-----------------------AATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ACTTGTGTTTTGTTGTCGCATTAATGGGTTACAGATCTCTGTTTACACCCGTGTAGTCATAAATTGTCTACTTTATGTGATTTCTTTAGAGAATATATAGATCAAATATGTAACAAATATGTAACACATGTAACACATCCATACATATATAGACGTAAATA--------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
..........TGTTGTCGTATTAATGGGTTACA....................................................................................................................................................2314.004.000.000.000.00
............TTGTCGTATTAATGGGTTACAGATC................................................................................................................................................2514.004.000.000.000.00
..........TGTTGTCGTAATAATGGGTTACAGA..................................................................................................................................................2513.003.000.000.000.00
..........TGTTGTCGTATTAATGGGTTACAGA..................................................................................................................................................2513.003.000.000.000.00
..........TGTTGTCGTATTAATGGGTTAC.....................................................................................................................................................2212.002.000.000.000.00
........TTTGTTGTCGTATTAATGGG.........................................................................................................................................................2011.001.000.000.000.00
...........................................TACACCAGTGCAGTCATAAA......................................................................................................................2011.001.000.000.000.00
...............TCGTATTGATGGGTTACAG...................................................................................................................................................1911.001.000.000.000.00
..........TGTTGTCGTATTAATGGGTTA......................................................................................................................................................2111.001.000.000.000.00
...TGTGTTTTGTTGTCGTATTAATGGGT........................................................................................................................................................2611.001.000.000.000.00
..........TGTTGTAGTATTAATGGGTTACAGATC................................................................................................................................................2711.001.000.000.000.00
..TTGTGTTTTGTTGTCGTATTA..............................................................................................................................................................2111.001.000.000.000.00
...........GTTGTCGTATTAATGGGTTACA....................................................................................................................................................2211.001.000.000.000.00
..........TGTTGTCGTATTGATGGGTTAC.....................................................................................................................................................2211.001.000.000.000.00
.......TTTTGTTGTCGTATTAATGGG.........................................................................................................................................................2111.001.000.000.000.00
...........GTTGTCGTATTAATGGGTTAC.....................................................................................................................................................2111.000.000.001.000.00
......GTTTTGTTGTCGTATTAATGG..........................................................................................................................................................2111.001.000.000.000.00
...........................................TACACCAGTGTAGTCATAACTTGTCT................................................................................................................2611.000.000.000.001.00
.............TGTCGTATTAATGGGTTTCAGATC................................................................................................................................................2411.001.000.000.000.00
............TTGTCGTATTAATGGGTTACAGA..................................................................................................................................................2311.001.000.000.000.00
..............GTCGTATTAATGGGTTACAGATCTCTGT...........................................................................................................................................2811.001.000.000.000.00
..........TGTTGTCGTATTAATGGGTTACAGATC................................................................................................................................................2711.001.000.000.000.00
..........TGATGTCGTATTAATGGGTTACAGATC................................................................................................................................................2711.001.000.000.000.00
..........TGTTGTCGTATTAACGGGTTACAGA..................................................................................................................................................2511.001.000.000.000.00
..........TGTTGTCGTATTAATGGGTT.......................................................................................................................................................2011.001.000.000.000.00


droPer1 - 4 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
220 super_28:207610-207724 - 47.81
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TATT---TTCA---GTTTTCGGATTAAAGCTAATGAAAGTGTATGAAAATTAAATTATTAAATTGATTAAAATAAATATACATAATATGTAATATATTTAA----TTAAATAAATAAATATTAAT---------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
...........................................................................................................................AT---------------18220.050.000.050.000.000.00
...................................AAAGTGTxTGAAAATTAAAA.....................................................................................1911.001.000.000.000.000.00
.........................................................TTAAATTGATTCTAATAAA................................................................1911.000.001.000.000.000.00
..GT---TTCA---GTTTTCGGATTGA.................................................................................................................1911.000.000.000.000.001.00
TATC---ATCA---GTTTTCGGAT....................................................................................................................1811.000.000.000.000.001.00
...........................................................................................................................GT---------------19110.090.090.000.000.000.00
38 super_76:266365-266469 + 47.1
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATG---TATAATATGTAACCC-------ATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AGTTG----------------------CGGATATTTAACTATATATATGTAATATATTGTTATATTATATTATATATATAAAATATAATAAATAATAATAATATAACTAATAATGAAATATAATA-----------------------AA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
................................................................................................AATAATATAATCAATAATG...................................1921.500.000.000.000.001.50
.................................................................................................ATAATATAATCAATAATGA..................................1920.500.000.500.000.000.00
AGTTG----------------------CGGATATTTAACTG.............................................................................................................1930.330.330.000.000.000.00
.GTTG----------------------CGGATATTTAACTATATGT........................................................................................................2330.330.000.000.000.000.33
230 super_55:169643-169726 - 35.97
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATGTATTTATGTGTGTTTAGTTATAT----TTATACGATTACTAATAAAATGCATGCAATCAAGCTCTACTACATATATGTATATCAT----------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
ATGTATTTATxTGTGTGTA.........................................................................................................................1830.330.000.330.000.000.00
..GTATTTATxTGTGTGTAGT.......................................................................................................................1811.000.001.000.000.000.00
..............................................GGAATGCATGCAATCAAGCTC.........................................................................2111.000.000.000.001.000.00
......TTATGTGTGTTTAGGTATTT----T.............................................................................................................2111.001.000.000.000.000.00
323 super_514:2367-2429 - 28.99
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
G----------------------------TATATATTAATTTTAGAAAAATACATCAAATATTCTGACTTTACAAATATGTATAATATGTA-------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo


droWil1 - 12 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
112 scaffold_181089:9808790-9808940 + 48.42
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATG------------------TTATATAATGCTACATAAATGTAT------AATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGTTTTTATTTTTATATATATTTATATATATATATATATATATTGTATATATAATTTGTTCTGTTTTTTTTTTTTTATTTACTTTTGTTTAAATTCATTTCCCTATTAAGTTACACACACATATGTATATGTATATATATACATATAC-------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..................................................TATATTGTTTGTTCTGTTT...............................................................................................1921.500.001.500.000.00
...........................................................................................................ATTxAGTTACACACACATAG.....................................1911.000.001.000.000.00
.............................................................TTCTGTGTTTCTTTTTTT.....................................................................................18110.090.000.090.000.00
.....................................................................................................................ACATACATATGTATATATATATATATA....................27280.040.000.000.040.00
...........................................................................................................................ATATGTATATGTATATATGGAC...................2220.500.000.000.000.50
.....................TATTTATATATGTATATAT............................................................................................................................19400.030.000.030.000.00
....................................................................................................................................................TAT-------------18180.060.000.060.000.00
..............................ATATATATATATAAAGTGT...................................................................................................................19260.040.000.040.000.00
.................................................ATATAxCATTTGTTCGGTT................................................................................................1811.000.001.000.000.00
......................ATTAATATATATATATATATATA.......................................................................................................................23150.070.000.070.000.00
........................................................................TTTTTGTATTTCCTTTTGT.........................................................................1920.500.000.000.500.00
...........................................................................................................................ATACGTATGTGTATATATATA....................21190.050.050.000.000.00
......................ATTTCTATATATATATATATATA.......................................................................................................................23130.080.000.080.000.00
..................ATCTATTTATATATATATAT..............................................................................................................................204220.000.000.000.000.00
....................................................................................................................................TGAACATATATACATATA..............18310.030.000.000.000.03
.....................................................................................................................ACACACATATATCTATGT.............................18110.090.000.090.000.00
..............................ATATATATATAGAGATTGTAT.................................................................................................................2130.330.000.330.000.00
............................................ATTGTATATATAAGGTGT......................................................................................................1811.000.001.000.000.00
...........................................TATTGTATxTATAATTGGT......................................................................................................1820.500.000.500.000.00
..................................................................................................................CACACACACATATATATATGTATAT.........................2560.170.000.170.000.00
273 scaffold_180441:206-317 - 47.1
ATTTGTTTTCGGTTGTTTTC----TTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
T-TTGTCTCGGACGGTTTTGAACAAAATTTTTGTT--TTAAATAATTAATAGGGAATAAAATAATATTTAATAATATAATATTTAATAATATAATATTATATTATTAATTTAAAT-----------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.........................AATTTTTGGT--TTAAAAAA...................................................................................................1840.500.000.500.000.00
.................................................TAGGGAAAAAAATAATTTTT...........................................................................2011.001.000.000.000.00
158 scaffold_181154:167041-167166 + 46.67
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTA----TAATATGTAACCCATTTATAAT-------TTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTTCTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTAAATTCGTTAGAGTTATTTTAAATTTT----CAAGTCGCACAAATTCACTCATTGCTTTTAATTTCTCTTCAAATCAAACATTATTTTACGGAAAT---------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..........................................................TTT----CAAGTCGCACAAATTCACTCAT................................................................25510.600.4010.200.000.00
..........................................................TTT----CAAGTCGCACAAATTCACTCATT...............................................................2652.600.002.400.000.20
..........................................................TTT----CAAGTCGCACAAATTCACTCATTGC.............................................................2851.600.001.600.000.00
............................................................T----CAAGTCGCACAAATTCACTCATTGCTT...........................................................2851.400.001.400.000.00
.....................................................TAAATTTT----CAAGTCGCACAAATTCACT...................................................................2751.400.001.400.000.00
.............................................................................................TAATTTCTCCTCAAATCAAACATTGTTT..............................2841.750.001.750.000.00
.............................................................................................TAATTTCTCCTCAAATCAAACATTGTT...............................2741.250.001.250.000.00
.............................................................................................TAATTTCTCCTCAAATCAAACATTGT................................2641.000.001.000.000.00
..........................................................TTT----CAAGTCGCACAAATTCACTCA.................................................................2450.800.000.800.000.00
...........................................................TT----CAAGTCGCACAAATTCACTCATTGC.............................................................2750.600.000.600.000.00
............................................................................................TTAATTTCTCCTCAAATCAAACATTG.................................2640.750.000.750.000.00
..........................................................TTT----CAAGTCGCACAAATTCACTC..................................................................2350.600.000.600.000.00
...........................................................................................TTTAATTTCTCCTCAAATCAAACATTGT................................2840.750.000.750.000.00
............................................................................................TTAATTTCTCCTCAAATCAAACATTGT................................2740.750.000.750.000.00
393 scaffold_182292:533-640 - 45.2
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTAAAATTTAATTTATTAGTTTAATTACATATATACAATTATATAATTTTTATACAATTTATTTTTATTTAATATAAATTATATAAATAAAA--------TAATTT------------------------TGTTTATAAA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..AAAATTAAATTTATTAGGT.......................................................................................................................19116.001.0015.000.000.00
...AAATTAAATTTATTAGGT.......................................................................................................................1813.000.003.000.000.00
.TAAAATTAAATTTATTAGGT.......................................................................................................................2011.000.001.000.000.00
TTAAGATTTAATTTATTAGTTT......................................................................................................................2211.001.000.000.000.00
.TAAGATTTAATTTATTAGTT.......................................................................................................................2011.000.001.000.000.00
.......................................................AATTTATTTTTATTAAAT...................................................................1880.130.000.000.000.13
TTAAGATTTAATTTATTAGT........................................................................................................................2011.000.001.000.000.00
..........................TGATATATACAATTATAT................................................................................................1840.250.000.250.000.00
.............................................................................ATTATATAGATTAAA--------TAA.....................................1811.000.001.000.000.00
.....................................................................................................ATTTT------------------------TGTTTATAAA1830.330.000.330.000.00
..............................................................TTTTTTTTAATACAAATTA...........................................................1920.500.000.500.000.00
............................................................................AATTATATAGATTAAA--------TA......................................1811.000.001.000.000.00
..........ATTTATTAGTTCATTTACA...............................................................................................................1911.000.001.000.000.00
...................................................ATTCAATTTATTTTTGTT.......................................................................1830.330.000.330.000.00
305 scaffold_181028:2241-2366 - 44.96
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAA---------TGTATAATATGTAACCCATTTATAATTTTATATACGAAA-ATACTTATCCTCTGAGGGAGTGA
ATTCTTTTTCTGTCTATATTACTTGTTCGTATATTCCACCACAG---------------TCCGACTTGGCAGTATCCACTCACCATTTGGAAGCTATTCAACTTATTTCCTCATATATCTCCGACAAAGACTTACTCGTTG---------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..........................TCGTATATTCCACCACAG---------------TCCGACT....................................................................................25113.000.004.000.009.00
..................................................................TGGCAGTATACACTCACCATTTGGAAGC........................................................2816.000.006.000.000.00
.........................TTCGTATATTCCACCACAG---------------TCCGACT....................................................................................2616.000.004.000.002.00
..........................................................................................................TTCCTCATATCTCTCTGACAAAGACT..................2616.000.001.000.005.00
...............................TATTCCACCACAG---------------TCCGACTT...................................................................................2114.000.000.000.004.00
...................TACTTGTTCGTATATTCCACCACAG---------------...........................................................................................2513.000.003.000.000.00
...................TACTTGTTCCTATATTCCACCACTG---------------T..........................................................................................2613.000.003.000.000.00
...............................TATTCCACCACAG---------------TCCGACTTGGCAG..............................................................................2613.001.002.000.000.00
...........................................................TCCGACTTGGCAGTATACACTCACCATT...............................................................2813.000.003.000.000.00
................TATTACTTGTTCGTATATTCCACCACAG---------------...........................................................................................2813.000.003.000.000.00
..............................................................................................TATTCAACTTATTTCCTCATATCTCT..............................2613.000.003.000.000.00
.....................................................................CAGTATACACTCACCATTTGGAAGC........................................................2512.000.002.000.000.00
....................................................................GCAGTATACACTCACCATTTGGAAGC........................................................2612.000.002.000.000.00
...............................................................................................................CATATCTCTCTGACAAAGACT..................2112.000.000.000.002.00
...........................................................................................................TCCTCATATCTCTCTGACAAAGACT..................2512.000.001.000.001.00
...CTTTTTCTGTCTGTATTT.................................................................................................................................1830.670.000.000.000.67
................................ATTCCACCACAG---------------TCCGACTTG..................................................................................2112.000.000.000.002.00
.......................................CACAG---------------TCCGACTTGGCAGTATACACT......................................................................2612.000.001.000.001.00
..........................................................................TACACTCACCATTTGGAAGC........................................................2012.000.002.000.000.00
.......TTCTGCCTATGTTACTTGTTCGTAT......................................................................................................................2530.330.000.330.000.00
................TATTACTTGTTCGTATATTCCACCA.............................................................................................................2511.000.001.000.000.00
.................................................................................................TCAACTTATTTCCTCATATCTCTCTGA..........................2711.000.001.000.000.00
.....................CTTGTTCCTATATTCCACCACTG---------------T..........................................................................................2411.000.001.000.000.00
..........................TCGTGTATTCCACCACAG---------------TCCGACT....................................................................................2511.000.001.000.000.00
.......................................CACAG---------------TCCGACTTGGCAGTATACACTT.....................................................................2711.000.001.000.000.00
.......................................................................................................TATTTCCTCATATCTCTCTGACAAAGACT..................2911.000.000.000.001.00
.......................................CACAG---------------TGCGACGTGGCAGTA............................................................................2011.001.000.000.000.00
.......................TGTTCCTATATTCCACCA.............................................................................................................1811.000.001.000.000.00
.......................TGTTCCTATATTCCACCACTG---------------TC.........................................................................................2311.000.001.000.000.00
.................................................................................................................TATCTCTCAGACAAAGACTTACTCGT...........2611.000.001.000.000.00
..................................TCCACAACAG---------------TCCGACTTGGCAGTA............................................................................2511.000.001.000.000.00
..............................................................................................................TCATATCTCTCAGACAAAGACTTACTCG............2811.000.001.000.000.00
..........................TCGTATATTCCACCACAG---------------TCCGACTTGA.................................................................................2811.000.001.000.000.00
......................................CCACAG---------------TCCGACTTGGCAG..............................................................................1911.000.001.000.000.00
.................ATTACTTGTTCGTGTATTCCACCACA...........................................................................................................2611.000.001.000.000.00
.................................................................................ACCATTTGGAAGCTATTCAACTTATT...........................................2611.000.001.000.000.00
........................................................................TATACACTCACCATTTCGAAGCTATTC...................................................2711.000.001.000.000.00
..........................TCGTATATTCCACCACAG---------------TTCGA......................................................................................2311.000.001.000.000.00
............................................................................CACTCATTATTTGGAAGCTATTCAACT...............................................2711.000.001.000.000.00
.....................................................................CAGTATACACTCACCATTTGGAAGCTA......................................................2711.000.001.000.000.00
..........................................................................TACACTCACCATTTCGAAGCTATTCAAC................................................2811.000.001.000.000.00
.......................TGTTCGTATATTCCACCACAG---------------TCCG.......................................................................................2511.000.001.000.000.00
..................................................................TGGCAGTTTACACTCACCATTTGGAAGC........................................................2811.000.001.000.000.00
..TCTTTTTCTGCCTATATTACTTGTTCGT........................................................................................................................2830.330.000.330.000.00
..........................................................................TACATTCACCATTTGGAAGCTATTCAAC................................................2811.000.001.000.000.00
.....................................................................CAGTATACATTCACCATTTGGAAGCTA......................................................2711.000.001.000.000.00
.......................................CACAG---------------TCCGACTTGGCAGTATACACTC.....................................................................2711.000.000.000.001.00
.........................................................................ATACATTCACCATTTGGAAGCT.......................................................2211.001.000.000.000.00
.......TTCTGCCTATATTACTTGTTCGTGTA.....................................................................................................................2630.330.330.000.000.00
..............................................................................................................TCATATCTCTCAGACAAAGACT..................2211.000.001.000.000.00
..........................................................................TACACTCACCATTTCGAAGCTATTCAACT...............................................2911.000.001.000.000.00
..................................................................TGGCAGTATACATTCACCATTTGGAAGC........................................................2811.000.001.000.000.00
..........................TCGTATATCCCACCACAG---------------TCCGACT....................................................................................2511.000.000.000.001.00
.......................TGTTCGTATATTCCACCACAG---------------TCCGACT....................................................................................2811.000.001.000.000.00
..........................TCGTATATTCCACCTCAG---------------TCCGACT....................................................................................2511.000.001.000.000.00
................TATTACTTGTTCGTATATTCCACCAC............................................................................................................2611.000.001.000.000.00
.......................TGTTCGTATATTCCACTACAG---------------TCCGA......................................................................................2611.000.001.000.000.00
......TTTCTGTCTATATTACTTGTTCGTA.......................................................................................................................2511.000.001.000.000.00
.....................CTTGTTCGTATATTCCACCACAG---------------TCCGA......................................................................................2811.000.001.000.000.00
...............................TATTCCACCACAG---------------TCCGACTTGGCAGTA............................................................................2811.000.001.000.000.00
..............................................................................................................TCATATCTCTCTGACAAAGACT..................2211.000.000.000.001.00
................................................................................................TTCAACTTATTTCCTCATATCTCTCTGA..........................2811.000.001.000.000.00
................................................................................................TTCAACTTGTTTCCTCATATCTCT..............................2411.000.001.000.000.00
...............................................................................TCACCATTTGGAAGCTATTCAACTTAT............................................2711.000.001.000.000.00
........................................................................TATACACTCACCATTTGGAAGCTAT.....................................................2511.000.001.000.000.00
.....................CTTGTTCGTATATTCCACCACAG---------------TCCG.......................................................................................2711.000.001.000.000.00
.................................TTCCACCACAG---------------TCCGACTTGGCAGT.............................................................................2511.000.001.000.000.00
............................................................................CACTCACCATTTGGAAGCTATTCAACT...............................................2711.000.001.000.000.00
..........................TCGTGTATTCCACCACAG---------------TCCGACTTGG.................................................................................2811.000.001.000.000.00
...........................................................TCCGACTTGGCAGTATACACTCACCGT................................................................2711.000.001.000.000.00
.............................TATATTCCACCACAG---------------TCCGACTTGGCAA..............................................................................2811.000.001.000.000.00
.................................................................TTGGCAGTATACACTCACCATTTGGAAGC........................................................2911.000.001.000.000.00
.......................................CACAG---------------TCCGACTTGGCAGTATACA........................................................................2411.000.001.000.000.00
.........................TTCGTATATTCCACCACAG---------------TCCGA......................................................................................2411.000.001.000.000.00
...............................................................................TCACCATTTCGAAGCTATTCAACT...............................................2411.000.001.000.000.00
.....................................................................CAGTATACACTCACCATTTGGAAG.........................................................2411.000.001.000.000.00
.....................................................................CAGTATACACTCACCATTTCGAAGCTAT.....................................................2811.000.001.000.000.00
.......TTCTGCCTATATTACTTGTTCGTGTAT....................................................................................................................2730.330.000.330.000.00
................TATTACTTGTTCGTGTATTCCACCACA...........................................................................................................2711.000.001.000.000.00
298 scaffold_180908:101458-101568 - 44.31
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTAT----AATATGTAAC------CCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATAACTTC---GTTATTTTCTGAACTTTTGCCGTAAAATTTTATATGGGTGAGTTAATTGCACATA--------TAAACGACTATGCCAAATTTGATCAAGTTCGGGTGATTATATCATATA----------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
...........................................................................................TTTGATCAAGATCGGGTGACT......................................21128.0011.004.001.0012.00
..................................................................................TATGCCAAATTTGATCAAGATCGGG...........................................25211.000.5010.500.000.00
.........................................................................................AATTTGATCAAGATCGGGTGA........................................21117.006.007.003.001.00
.....................................................................................GCCAAATTTGATCAAGATCGG............................................21111.450.090.360.360.64
........................................................................................AAATTTGATCAAGATCGGGTG.........................................21115.002.007.005.001.00
.........................................................................................AATTTGATCAAGATCGGGTGACT......................................23113.002.003.000.008.00
.............................................................................................TGATCAAGATCGGGTGACTATATCA................................25112.000.0011.001.000.00
............................................................................................TTGATCAAGATCGGGTGACTATATCA................................26111.000.0011.000.000.00
............................................................................................TTGATCAAGATCGGGTGACTATATC.................................25111.001.0010.000.000.00
........................................................................................AAATTTGATCAAGATCGGGT..........................................2019.006.003.000.000.00
............................................................................................TTGATCAAGATCGGGTGACT......................................2019.004.003.000.002.00
..............................................................................................GATCAAGATCGGGTGACT......................................1819.000.004.000.005.00
............................................................................................TTGATCAAGATCGGGTGACTA.....................................2119.004.005.000.000.00
..................................................................................TGTGCCAAATTTGATCAAGATCGGG...........................................2524.000.004.000.000.00
........................................................................................AAATTTGATCAAGATCGGGTGT........................................2217.001.005.001.000.00
....................................................................................TGCCAAATTTGATCAAGATCGGGT..........................................2417.000.006.000.001.00
........................................................................................AAATTTGATCAAGATCGGGTGACT......................................2417.002.002.000.003.00
..AACTTC---GTTATTTTCTGAGCT............................................................................................................................2132.000.330.330.001.33
...........................................................................................TTTGATCAAGATCGGGTGACTA.....................................2215.001.004.000.000.00
......................................................................................CCAAATTTGATCAAGATCGGG...........................................2190.560.330.110.110.00
...................................................................................ATGCCAAATTTGATCAAGATC..............................................21110.450.000.180.000.27
.TAACTTC---GTTATTTTCTGAGC.............................................................................................................................2131.670.000.330.001.33
.................................................................................CTGTGCCAAATTTGATCAAGATCGGG...........................................2622.500.002.500.000.00
.........................................................................................AATTTGATCAAGATCGGGTG.........................................2022.500.501.500.000.50
..........................................................................................ATTTGATCAAGATCGGGTGACT......................................2214.000.002.000.002.00
.............................................................................................TGATCAAGATCGGGTGACT......................................1914.000.001.000.003.00
................................................................................................TCAAGATCGGGTGACTATATCATAT.............................2514.000.004.000.000.00
..AACTTC---GTTATTTTCTGAGC.............................................................................................................................2031.330.001.000.000.33
................................................................................................TCAAGATCGGGTGACTATATC.................................2114.000.001.001.002.00
.......................................................................................CAAATTTGATCAAGATCGGGT..........................................2114.001.001.002.000.00
................................................................................................TCAAGATCGGGTGACTATATCAT...............................2314.002.002.000.000.00
..........................................................................................ATTTGATCAAGATCGGGT..........................................1821.500.001.500.000.00
.....................................................................................GCCAAATTTGATCAAGATCGGGTGACT......................................2713.001.000.000.002.00
................................................................................................TCAAGATCGGGTGACTATATCATA..............................2413.000.003.000.000.00
.................................................................................CTATGCCAAATTTGATCAAGATCGG............................................2521.500.001.500.000.00
..................................................................................TATGCCAAATTTGATCAAGATC..............................................2240.750.000.000.000.75
...................................................................................GTGCCAAATTTGATCAAGATCGGGT..........................................2513.003.000.000.000.00
.......................................................................................CAAATTTGATCAAGATCGGGTGACTA.....................................2613.001.002.000.000.00
.............................................................................................TGATCAAGATCGGGTGACTATATC.................................2413.000.003.000.000.00
.........................................................................................AATTTGATCAAGATCGGGTGACTA.....................................2413.000.003.000.000.00
...............................................................................................ATCAAGATCGGGTGACTATAT..................................2113.001.000.002.000.00
.....................................................................................GCCAAATTTGATTAAGATCGG............................................2121.500.000.501.000.00
..................................................................................TGTGCCAAATTTGATCAAGATCGG............................................2431.000.001.000.000.00
.................................................................................................CAAGATCGGGTGACTATATC.................................2013.000.001.002.000.00
.................................................................................CTATGCCAAATTTGATCAAGATCGGG...........................................2613.001.002.000.000.00
..........................................................................................ATTTGATCAAGATCGGGTGACTAT....................................2413.001.002.000.000.00
.............................................................................................TGATCAAGATCGGGTGACTA.....................................2013.001.002.000.000.00
....................................................................................TGCCAAATTTGATCAAGATCGGG...........................................2331.000.000.670.330.00
357 scaffold_181145:2626687-2626782 - 39.13
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A------------------------------------ATGATGTATGGAGTATAAAGATGCGTATACTACTAATCCATCATGAACTGTGGAAATAGCTTGTATTATATTATAAGTAAATACTTCTCAACTGA--------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
......................................TGATGTATGGAGTATAAAGATGCGTA............................................................................2611.000.001.000.000.00
...........................................................................CATCATGGACTCTGGAAA...............................................1811.000.001.000.000.00
...................................................ATAAAGATGCGTATACTACTAATCCAT..............................................................2711.000.001.000.000.00
.................................................................................GAACTxTGGAGATAGCTTGT.......................................1911.001.000.000.000.00
.......................................GATGTATGGATTATAAAGATGCGTA............................................................................2511.000.001.000.000.00
.............................................TGGAGTATAAAGATGCGTATACT........................................................................2311.000.001.000.000.00
..........................................GTATGAAGCATAAAGATG................................................................................1811.000.001.000.000.00
420 scaffold_188377:784-866 - 35.51
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GG------------------------------------------------TACATAAACATACATACTCTTATGTAAACATTTATACATTTATACATAAGTATGTTTATACATAAGCATACCGCTCCTCTG---------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
............................................................................................TACATAAGTATGTGTGTA..............................18140.070.000.070.000.00
.........................................................................................................TTATACATAAGCATACCGCTCCT............2311.000.001.000.000.00
...................................................................................ATACTTTTATACATATGT.......................................1870.140.000.140.000.00
373 scaffold_181152:610222-610280 - 26.09
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTTTTACATTTTTTGTTCGATGTCTGTAAGCATGATTTTAAATGTATTAAAGAAAG---------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
ATTTTTTTAGATTTTGTGT.........................................................................................................................1921.000.001.000.000.00
........................................................AAG---------------------------------------------------------------------------------1850.200.000.000.200.00
ATTTTTTTTCACTTTTTGTT........................................................................................................................2011.001.000.000.000.00
170 scaffold_181155:1909401-1909434 + 15.94
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTCTTTTTCTGCCTTTATTACTTGTTCGTATAT----------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
......TTTCTGCCTTTATTACTTGTTCGTA.............................................................................................................2521.000.001.000.000.00
..TCTTTTTCTGCCTATATTACTTGTTCGT..............................................................................................................2830.330.000.330.000.00
.......TTCTGCCTTTATTACTTGTTCGTA.............................................................................................................2420.500.000.500.000.00
.......TTCTGCCTATGTTACTTGTTCGTAT............................................................................................................2530.330.000.330.000.00
.......TTCTGCCTATATTACTTGTTCGTGTA...........................................................................................................2630.330.330.000.000.00
.......TTCTGCCTTTATTACTTGTTCGTATA...........................................................................................................2620.500.000.500.000.00
.......TTCTGCCTATATTACTTGTTCGTGTAT----------------------------------------------------------------------------------------------------------2730.330.000.330.000.00
221 scaffold_176576:1342-1375 - 15.94
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTCTTTTTCTGCCTTTATTACTTGTTCGTATAT----------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
......TTTCTGCCTTTATTACTTGTTCGTA.............................................................................................................2521.000.001.000.000.00
..TCTTTTTCTGCCTATATTACTTGTTCGT..............................................................................................................2830.330.000.330.000.00
.......TTCTGCCTTTATTACTTGTTCGTA.............................................................................................................2420.500.000.500.000.00
.......TTCTGCCTATGTTACTTGTTCGTAT............................................................................................................2530.330.000.330.000.00
.......TTCTGCCTATATTACTTGTTCGTGTA...........................................................................................................2630.330.330.000.000.00
.......TTCTGCCTTTATTACTTGTTCGTATA...........................................................................................................2620.500.000.500.000.00
.......TTCTGCCTATATTACTTGTTCGTGTAT----------------------------------------------------------------------------------------------------------2730.330.000.330.000.00
50 scaffold_179589:1876-1909 + 13.77
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
GTCGTTTTTCCATTTTTGTTACCTGTTCTTACAT----------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.......TTCCATTTTTGTTACCTGTTCTTACAT----------------------------------------------------------------------------------------------------------2711.000.001.000.000.00
.....TTTTCCATTTTTGTTACCTGTTCT...............................................................................................................2411.000.001.000.000.00
......TTTCCATTTGTGTAACCTGTTCTTACA...........................................................................................................2711.000.001.000.000.00
.TCGTTTTTCTATTTTTGTTACCTGTTC................................................................................................................2711.000.001.000.000.00
.TCGTTTTTCCATTTTTGTTACCTGT..................................................................................................................2511.000.001.000.000.00
........TCCATTTTTGTTACCTGTTCTT..............................................................................................................2211.000.001.000.000.00
.......TTCCATTTGTGTAACCTGTTCTTACA...........................................................................................................2611.000.001.000.000.00
....TTTTTCCATTTTTGTTACCTGTTCT...............................................................................................................2511.000.001.000.000.00
.............TTTTGTTACCTGTTCTTACAT----------------------------------------------------------------------------------------------------------2111.000.000.001.000.00
....TTTTTCCATTTTTGTTACCTGTTCTT..............................................................................................................2611.000.001.000.000.00


droVir3 - 23 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
70 scaffold_12723:5508367-5508489 + 53.62
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACAT----AAATGTATAATATGTA-ACCCATTTATAATTTTATATA------CGAAAATACTTATCCTCTGAGGGAGTGA
TG-------------TGCTTGTATTTAAAGATTTAAAATTTTTATTATAATATATATTGTTATTAAGAGCTAAATATAAAAATATATAAGATAAAGATACCGTTATAAATATAGAAACACTAACGAAGATATATAT---------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
.....................................................................................AAAAGATAAACATACC..................................................1611.000.001.000.000.000.00
443 scaffold_13020:1548-1673 - 52.41
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACT-TATCCTCTGAGGGAGTGA
TCTGGTTTTGCAC-CTTAGTTTGCTTCATTTTACAAAAGTTTAATTGGATT---TAATTTTACATA-TGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTATATAAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTATATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTACATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTATATGAACAA...........22100.100.000.000.000.100.00
300 scaffold_10364:435-560 - 52.41
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACT-TATCCTCTGAGGGAGTGA
TCTGGTTTTGCAC-CTTAGTTTGCTTCATTTTACAAAAGTTTAATTGGATT---TAATTTTACATA-TGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTATATAAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTATATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTACATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTATATGAACAA...........22100.100.000.000.000.100.00
507 scaffold_13081:3317-3442 - 51.52
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAA--TTTTATATACGAAAATACT-TATCCTCTGAGGGAGTGA
TTCTGGTTTTGCACCTTAGTTTGCATCATTTTACAAAAGTTTAATTGGATT---TAATTTTACATA-TGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTATATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTATATGAACAATGATGT.....28100.200.000.000.000.200.00
........................................................................................................................TTACATGAACAATGATGT.....18100.100.000.000.000.100.00
....................................AAGTTAAATTGGxTT---TAATT....................................................................................19100.100.000.000.100.000.00
..............................................................................................................TTTTGGAAAATTATATGAACAA...........22100.100.000.000.000.100.00
401 scaffold_12954:543458-543583 - 51.11
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACTTAT--CCTCTGAGGGAGTGA
TCTGGTTTTGCACC-TTAGTTTGCATCATTTTACAAAAGTTTAATTGGATT---TAATTTTACAT-ATGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTAT-ATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTAT-ATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT.....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTAC-ATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTAT-ATGAACAA...........22100.100.000.000.000.100.00
397 scaffold_12954:518323-518448 - 51.11
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACTTAT--CCTCTGAGGGAGTGA
TCTGGTTTTGCACC-TTAGTTTGCATCATTTTACAAAAGTTTAATTGGATT---TAATTTTACAT-ATGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTAT-ATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTAT-ATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT.....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTAC-ATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTAT-ATGAACAA...........22100.100.000.000.000.100.00
396 scaffold_12954:512805-512930 - 51.11
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACTTAT--CCTCTGAGGGAGTGA
TCTGGTTTTGCACC-TTAGTTTGCATCATTTTACAAAAGTTTAATTGGATT---TAATTTTACAT-ATGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTAT-ATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTAT-ATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT.....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTAC-ATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTAT-ATGAACAA...........22100.100.000.000.000.100.00
399 scaffold_12954:526201-526326 - 51.11
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACTTAT--CCTCTGAGGGAGTGA
TCTGGTTTTGCACC-TTAGTTTGCATCATTTTACAAAAGTTTAATTGGATT---TAATTTTACAT-ATGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTAT-ATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTAT-ATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT.....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTAC-ATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTAT-ATGAACAA...........22100.100.000.000.000.100.00
398 scaffold_12954:523648-523773 - 51.11
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACTTAT--CCTCTGAGGGAGTGA
TCTGGTTTTGCACC-TTAGTTTGCATCATTTTACAAAAGTTTAATTGGATT---TAATTTTACAT-ATGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTAT-ATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTAT-ATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT.....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTAC-ATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTAT-ATGAACAA...........22100.100.000.000.000.100.00
304 scaffold_12078:1973-2098 - 51.11
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAAT--TTTATATACGAAAATACTTAT--CCTCTGAGGGAGTGA
TCTGGTTTTGCACC-TTAGTTTGCATCATTTTACAAAAGTTTAATTGGATT---TAATTTTACAT-ATGGTAGGTATAAGTATAATATA-------------ATTAGTTATTTTGGAAAATTAT-ATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............................................................................................................TTTTGGAAAATTAT-ATGAACAATGATGT.....28100.200.000.000.000.200.00
....................................AAGTTAAATTGGxTT---TAATT.....................................................................................19100.100.000.000.100.000.00
........................................................................................................................TTAC-ATGAACAATGATGT.....18100.100.000.000.000.100.00
..............................................................................................................TTTTGGAAAATTAT-ATGAACAA...........22100.100.000.000.000.100.00
76 scaffold_12735:47283-47418 + 51.01
ATTTGTTTTCGGTTGTTTTCTTATTTTCG------TATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAA-ATGTATAATATGTAACCCATTTAT--AATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTATAGTA--GGTGTTTCTTTTACTTTGGGTTTTTTATATT---TTATAATTAATTTCTTTGGTGGCTTTTGAACTTATATGTCAAATACAGTGTTAAACTTATTAATATGATTACAAATATGGTTATTGTAATTATCTG---------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
............TGTTTCTTCTACTTTGGGTTT....................................................................................................................2112.002.000.000.000.000.00
......................................................................................................................ATATGTTTATTGTTATTAT............1920.500.000.000.500.000.00
...............................................................................................................ATTACAAATATGGTTATTGT..................2020.500.000.000.000.000.50
.......................................................................................TACAGTGTTAAACTTATTAATATG......................................2411.000.000.001.000.000.00
...........GTGTTTCTTCTACTTTGGGTT.....................................................................................................................2111.000.001.000.000.000.00
.......................................................................GAACTTATATGTCAAATACAGTGTT.....................................................2520.500.000.000.500.000.00
........................................................................................................................ATGGTTATTGTAATTATCTG---------2120.500.500.000.000.000.00
...............................................................ATGCTTTTGAACTTATATGTC.................................................................2120.500.500.000.000.000.00
.............GTTTCTTCTACTTTGGGGTT....................................................................................................................2011.000.000.000.000.001.00
.....GTA--GGCGTTTCTTTTAGT............................................................................................................................1811.000.000.001.000.000.00
............................................................................................................................TTATTGTAATTATCTG---------1920.500.000.000.000.500.00
.............................................................................ATATGTCAAATACAGTGTT.....................................................1920.500.500.000.000.000.00
......................................................................TGAACTTATATGTCAAATACAGTGT......................................................2520.500.500.000.000.000.00
........................................................................AACTTATATGTCAAATACAGT........................................................2120.500.500.000.000.000.00
TTATTGTA--GGTGTTTCTTCTA..............................................................................................................................2111.001.000.000.000.000.00
472 scaffold_13047:2035571-2035689 - 50.0
ATTTGTTTTCGGTTGTTTTCTTA------TTTTCGTATAT--------------AAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA---------------------
---------CAATTGTTTTCTGAGTAACATTTGCGTGTGCGGCTAAGCTTGAGTAATGTTACAAGCATAT----TAATGTTATGTAATGTTAAATAAATGTT-------------------------------------------------AAGGAATGATATTGGAATGCTGTTAAAATT
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
...................................................................................................................................................................................TT21100.100.100.000.000.000.00
..................................................................................................................................................................TTTGAATGCTGxTAAAATT1820.500.000.000.500.000.00
...........................CTTGTGCGTGTGCGGCTA........................................................................................................................................1811.000.000.000.000.001.00
297 scaffold_10324:720320-720428 - 49.03
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACA------TAATGTTATATAATGCTACATAAATGT-ATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGCTTTT--TTTTTTTCTTTTTTTTGTATATAGTAGTATTGATGGGGCGCAAGCTGATAATGTTTGTTATTGTTGTT-----GTGACAACTTGTGACACAATTCCAATTTAAT-------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
...................................GTAGTTTTGATGGGGCGT..............................................................................................18111.009.001.000.001.000.00
.................................TGGTAGTTTTGATGGGGCG...............................................................................................1912.002.000.000.000.000.00
.TTAGCTTTT--TTTTTTTTT..............................................................................................................................18230.040.000.000.040.000.00
.............................................................AATGTTTGTTATTGTTTTT-----CT............................................................2111.000.000.001.000.000.00
.............................................................TATGTGTGTTATTGTTGTT-----..............................................................1930.330.000.000.330.000.00
................................ATTGTAGTTTTGATGGGGC................................................................................................1911.000.000.000.001.000.00
........TT--TTTTTTTCGTTTTTTTGTT....................................................................................................................21100.100.000.000.000.000.10
.CTTGCATTT--TTTTTTTCTT.............................................................................................................................1911.000.000.001.000.000.00
...................................................................TGTTGTTGTTGTT-----GTGACA........................................................19470.020.000.000.000.020.00
........................................ATTGATGGGGTGCAAGCA.........................................................................................1811.001.000.000.000.000.00
........TT--TTTTTTTCGTTTTTTTGT.....................................................................................................................20150.070.070.000.000.000.00
.........................................................TGATAATGTTTGGTAATGTTGTT-----..............................................................2311.000.001.000.000.000.00
......TTTT--TTTCTTTCTTTTGTTTG......................................................................................................................2130.330.330.000.000.000.00
400 scaffold_12954:531581-531696 - 42.03
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAA-ATACTTATCCTCTGAGGGAGTGA
TTCTGGTTTTGCACCTTAGTTTGCATCATTTTACAAAAGTTTAATTGGATTTAATTTATTTAATT------------------------TATTAA-TTTAATTAGTTATTTTGGAAAATTATATGAACAATGATGTTGTGA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
............................................................................................................TTTTGGAAAATTATATGAACAATGATGT.....28100.200.000.000.000.200.00
............................................................................................................TTTTGGAAAATTATATGAACAA...........22100.100.000.000.000.100.00
......................................................................................................................TTACATGAACAATGATGT.....18100.100.000.000.000.100.00
....................................AAGTTAAATTGGxTTTAATT.....................................................................................19100.100.000.000.100.000.00
............................................................TAAAT------------------------TATTAA-TATAATTAGT...................................2111.000.000.001.000.000.00
156 scaffold_12970:169310-169405 + 39.17
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
A------------------------------GATGGAATTTCAAA-------TATTATATGATGGAATGTTTTTTGAAGGCACATTATGTTGCTACATTATTATGTTATATATTAATATCTTAACTTTATTAG-------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
........................................................................TTTGAAGGCAGATGATGTT.................................................1911.001.000.000.000.000.00
....................................................................................................................................T-------2340.250.000.000.250.000.00
.........................................................................................................ATATxTATTACTATCTTAACT..............2011.000.000.001.000.000.00
..............................................................................................................TATTACTATCTTAACTGT............1811.000.000.000.001.000.00
511 scaffold_13324:167621-167692 - 32.16
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATA-ATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTCTATTCCT-TTTTTTATAGCTTCCATTAATAATAATTTAATTCGTTAACCTGAACGCTGTTTTCTGCTA--------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
.........................................TAATTCGTTAACCTGAACGCT...............................................................................2132.000.000.000.000.671.33
..................................................AACCTGAACGCTGTTTTCTGC......................................................................2121.500.000.500.000.001.00
.........................................TAATTCGTTAACCTGAACGCC...............................................................................2130.670.000.000.000.000.67
.................................................TAACCTGAACGCTGTTTTCTGCTA--------------------------------------------------------------------2721.000.500.000.000.500.00
...................................ATAATTTAATTCGTTAACC.......................................................................................1921.000.000.000.000.001.00
........................................TTAATTCGTTAACCTGAACGC................................................................................2130.670.670.000.000.000.00
.......................................TTTAATTCGTTAACCTGAACG.................................................................................2130.330.000.000.000.330.00
...................................................ACCTGGACGCTGTTTTCTG.......................................................................1920.500.000.000.000.000.50
..............................................CGTTAACCTGAACGCTGTTTT..........................................................................2120.500.000.000.000.000.50
.....................................AATTTAATTCGTTAACCTGGAC..................................................................................2230.330.000.000.000.000.33
...........................................ATTCGTTAACCTGGACGCTGTT............................................................................2230.330.000.330.000.000.00
...................................................ACCTGAACGCTGTTTTCTG.......................................................................1920.500.000.000.000.000.50
................................................TTAACCTGGACGCTGTTTTCT........................................................................2120.500.500.000.000.000.00
.........................................TAATTCGTTAACCTGGACG.................................................................................1930.330.000.000.000.000.33
.......................................TTTAATTCGTTAACCTGGA...................................................................................1930.330.000.000.000.000.33
..................................................AACCTGGACGCTGTTTTCTGC......................................................................2120.500.000.000.000.000.50
................................................TTAACCTGAACGCTGTTTTCT........................................................................2120.500.000.000.000.000.50
...................................................ACCTGGACGCTGTTTTCTGCT.....................................................................2120.500.500.000.000.000.00
.............................................TCGTTAACCTGGACGCTGTTTTCTGC......................................................................2620.500.000.000.000.500.00
.........................................TAATTCTTTAACCTGAACGCT...............................................................................2130.330.000.000.000.330.00
..TTCTATTCCT-TTGTTTATAGCTTC..................................................................................................................2420.500.500.000.000.000.00
.............................................TCGTTAACCTGAACGCTGTTTTC.........................................................................2320.500.000.000.000.000.50
...................................................ACCTGAACGCTGTTTTCTGCTA--------------------------------------------------------------------2520.500.000.000.000.500.00
............................................TTCGTTAACCTGAACGCTGTTCCC.........................................................................2430.330.000.000.000.330.00
.......................................TTTAATTCGTTAACCTGA....................................................................................1830.330.000.000.000.000.33
.........................................TAATTCGTTAACCTGAACG.................................................................................1930.330.000.000.000.330.00
.....................................AATTTAATTCGTTAACCTGAACGCT...............................................................................2530.330.000.000.000.000.33
............................................TTCGTTAACCTGGACGCTGTTTTCA........................................................................2520.500.000.000.000.500.00
....................................................CCTGAACGCTGTTTTCTG.......................................................................1820.500.000.000.000.000.50
.......................................TTTAATTCGTTAACCTGGACG.................................................................................2130.330.330.000.000.000.00
...................................ATAATTTAATTCGTTAACCTG.....................................................................................2120.500.000.000.000.000.50
.................................................TAACCTGAACGCTGTTTTCTGC......................................................................2220.500.000.000.000.500.00
521 scaffold_13324:1519104-1519170 - 29.71
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TCTTTTGTTCTGCAGTTCTCTTTTGTTCGTTTTTTTTATTATGTATGAAATATATGCATATATATAA-------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..............GTTCTATTTTGTTGGTTT............................................................................................................18117.001.000.001.006.009.00
..............GTTCTATTTTGTTGGTTTTTT.........................................................................................................2111.000.000.000.001.000.00
.....TGTTCTGCAGTTGTGTTTT....................................................................................................................1911.001.000.000.000.000.00
.CTTTTGTTTTGCAGTTCTA........................................................................................................................1911.000.001.000.000.000.00
.....TGTTTTGCCGTTCTCTTTTG...................................................................................................................2011.000.000.001.000.000.00
240 scaffold_13324:681339-681389 + 23.91
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTAATTTTTATTTTTTTTTTTATTTTATTA-----------------------------------------------------------------------------------------TTTTTTGTTCGAATTATAAA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
.....TCTTGATTTTTTTTTTTATTTT.................................................................................................................2220.500.000.000.500.000.00
................TTTTTTAATTTTTTA-----------------------------------------------------------------------------------------TTTT................19140.070.000.000.070.000.00
..............TTTTCTTTATATTATTA-----------------------------------------------------------------------------------------TT..................1990.110.000.000.110.000.00
426 scaffold_12967:243258-243302 - 23.19
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTTTTTTTTTATTTTATTATTTTTGTTGTTCGAATTATAAA-----------------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
........TTTTTTAATTTTTTATTTT.................................................................................................................19140.070.000.000.070.000.00
......TTTTCTTTATATTATTATT...................................................................................................................1990.110.000.000.110.000.00
436 scaffold_12970:4443634-4443681 - 22.46
AT------TTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTCGCTGATTGCTTTCAGTTGTTTTTTTGTTTTTTTATTTTTTATTAT--------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
......................TTTTTTAATTTTTTATTTT.........................................................................................................19140.070.000.000.070.000.00
.....................TTTTGTTGTTTTTTTGTTTTT........................................................................................................21190.050.050.000.000.000.00
.............TTTTGTTGTTTTTTTGTTTTT................................................................................................................21190.050.050.000.000.000.00
........................CTTTGTTTTCTTATTTTT........................................................................................................1870.140.000.140.000.000.00
.............................TTTTTTAATTTTTTATTTT--------------------------------------------------------------------------------------------------19140.070.000.000.070.000.00
........TTGCTTTxAGATGTTTTTT.......................................................................................................................1811.000.001.000.000.000.00
105 scaffold_12875:13105169-13105211 + 21.01
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTCGATTGCAGTTGTTTATTTTGTTTCGTACACGACATGACA-------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head


droMoj3 - 11 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
462 scaffold_6541:2286599-2286731 - 55.47
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATA-TGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTTTGTATAGTAGTTTTAGTCTAGATTTGGTGACAATTGAAGACGGTTTATTAAATATAAAATCAAGCTTTATGAATATAAAACCAAACAACACTGTTATTATTTCA---CTATAATTAATCAACCTTGGAGGG-----
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
63 scaffold_3978:4555-4681 + 54.35
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATA--------------------------ATG-------TTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
AATTGTTTTTTTTTTTTTTTTTTTTTTTTTAATAAAAAAAATTAATTCATTTCATTGCTCAAGAGATGATGGTATTAGTAAAATGATAATTATTATGTAA---------------ATATTTTTAAAATATTTTTATTTTTAT-------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.......................................................TGTTCAAGAGATGATGGTAATAGT..............................................................................................2412.000.000.000.002.00
.......................................................TGCTCAAGAGATGATGGTATTAGAA.............................................................................................2511.001.000.000.000.00
.........................................................CTCTCGAGATGATGGTAT..................................................................................................1811.000.000.001.000.00
.......................................................TGTTCAAGAGATGATGGTAATAGTA.............................................................................................2511.001.000.000.000.00
.......................................................TGTTCAAGAGATGATGGTAATAGTAAA...........................................................................................2711.001.000.000.000.00
..TTGTTTTTGTTGTTTTTTTTT......................................................................................................................................................21300.030.030.000.000.00
.ATTGATTTTTTTTCTTTTTT........................................................................................................................................................20160.060.000.000.000.06
441 scaffold_6540:617632-617761 - 53.52
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAAT----GTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTATTATTA--TTATTTTTTTATTTTTTATTATTATTTTAAGAATTATTTTAAGTATGCTAAATATTGTTTAATAAACTACATTTTAATATTTTATTTTTTTAAGTTTTCTTACTAACAATTTCTTTTCAT------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
........................................................................................ATATTGTAxTTTTTTAAGTTT...................................2020.500.000.000.500.00
246 scaffold_1676:9394-9517 - 52.53
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTATTTTATTTTATTGTTTTATTTTATTATTTTATTTTATTATTT---TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTA---TTTTATTTTATTTTATTTATTTTAT----------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
404 scaffold_6482:2688018-2688129 - 51.71
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATG-GGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTATTTTTTTATATTTTTTTATTTTATTTTATATTATTTTATATTATTTTATATTAGTTTATTTTATTTTATTTTATTTTATTTTATTTAATTTAATT-TAATTTAA----------------------------TTTA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
........................................................TAGTTTATTTTGTTTTTTT..................................................................19160.060.000.000.000.06
310 scaffold_4326:1600-1751 - 46.27
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTAT---------------------------AAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ACATGTATTTTATTATTATATTATTTTTAAGTCTACATTATTTATTATATTTAATTATTTCTTATTTTTATTTATTTTATATTATATTATATAATATTATTAGTATGTAA---ATGTAAATTAGT------------TTGAAGTATGGTAATTTTACGTGGGAACAT
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
............................................ATATAxTTAATTATGTCTTAT......................................................................................................2014.002.001.001.000.00
...............................................TAxTTAATTATGTCTTATT.....................................................................................................1830.330.000.330.000.00
.............................................................................................................................................AGTATGGTAATTTTACGTGGG.....2111.000.000.000.001.00
151 scaffold_6404:74969-75082 + 41.64
ATTTGTTTTCG--GTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TGTTGAATTACTTGATGTTATGGCTGTTTCGTGTCT--TATAATAATTTTCTTAGATATTGTTTTAAATTTAATGAT-----TACAAATAGTATTAGACTTATAATAGTAATTATAAAAGT---------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
......ATTACTTGATGTTATGGCTGTTTCGTG.............................................................................................................2711.001.000.000.000.00
...TGAATTACTTGATGTTATGGCTGTT..................................................................................................................2511.001.000.000.000.00
...TGAATTACTTGATGTTATGGCTGTTT.................................................................................................................2611.001.000.000.000.00
........TACTTGATGTTATGGCTGTTTCGT..............................................................................................................2411.001.000.000.000.00
338 scaffold_5886:1018-1050 - 18.84
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TATTGTGTAAGGTTGTTTTCTCATTTTAGTATA-----------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
223 scaffold_6541:2221076-2221121 + 17.39
ATTTGTTTTCGGTTGTTT----------------TCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTTATTTGTGTTCGTTTAACTGACTTTATTTCATCTTCTTTTCGT--------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
..TTATTTGTGTTCTTTTGA........................................................................................................................................1811.000.000.001.000.00
408 scaffold_6491:5494-5527 - 16.67
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTTTATTTATTTATTTTTTTATTTTTATTTAT----------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.........................TTTATTTCT----------------------------------------------------------------------------------------------------------2020.500.500.000.000.00
66 scaffold_4004:4244-4275 + 13.04
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
ATTCATTTATGTTCGTTTAAGTGACTTTATAT------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo


droGri2 - 17 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
67 scaffold_6998:1526-1648 - 54.47
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTT--ATCCTCTGAGGGAGTGA
ATTTGTGTGTGTGTGTGTGTATATATACATACATACACACAGATATATGTTATGTATATGTATATATTTTTATAAATATGTATATATATATA----TGTATATATATATATATACATATATATATAT---------------
SizeHit CountTotal NormV109
Male body
...AGTGTGTGTGTGTGTGTA.........................................................................................................................18490.020.02
AGTTGTGTGTGTGTGCGTG...........................................................................................................................19100.100.10
.CTCGTGTGTGTGTGTGTGT..........................................................................................................................19510.020.02
TTTTGTGTGCGTGTGTGTG...........................................................................................................................19410.020.02
.TTTGTGTGTGTGTGTGTGCATG.......................................................................................................................22300.030.03
..TTGTGCGTGTGTGAGTGT..........................................................................................................................18290.030.03
46 scaffold_3224:2784-2923 - 53.18
ATTTGTTTTCGGTTGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATA-----------CTTAT-----CCTCTGAGGGAGTGA
CTTTCCTTTGGGCTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATATAT----CTATAAGACCACATTTATTT--------TCCCCCTCT-----TATTATGTAGGGAAAGAAAAAAATGTGACCTACGGCGCTGTTATATTGATTGG
SizeHit CountTotal NormV109
Male body
61 scaffold_5405:7646-7785 - 53.18
ATTTGTTTTCGGTTGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATA-----------CTTAT-----CCTCTGAGGGAGTGA
CTTTCCTTTGGGCTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATATAT----CTATAAGACCACATTTATTT--------TCCCCCTCT-----TATTATGTAGGGAAAGAAAAAAATGTGACCTACGGCGCTGTTATATTGATTGG
SizeHit CountTotal NormV109
Male body
..........................................................................................................................................................TGT22210.050.05
5 scaffold_8293:4157-4277 + 53.02
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTCCATTTTTATATATTCTCGTATATACGTATATATATATAATATATATGTATATATATATATATATATATATATATATATATAATATAT-----------------ATATATATATATACATAAC--CATAGGTATCAT
SizeHit CountTotal NormV109
Male body
18 scaffold_14906:13096270-13096397 + 49.13
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA--
TGTAGACGGGAG------TCCCCTTCTCCTATATAAAATAAAATATAATTTTGAAAAAATTCTCAAATATTGCAGAAATATGAAGTAGTGATTCGATCTTT-----GCGAG----TCATAAATATTATCTGAGAAACTAGTT
SizeHit CountTotal NormV109
Male body
98 scaffold_10146:3907-4018 - 45.65
ATTTGTTTTCGGTTGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAAT----ACTTATCCTCTGAGGGAGTG----A
CTTTCCTTTGGGCTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATATATCCC-------------------------------------CCCTCTTTTTATGTAGGGAAAGAAAAAAATGTGACCTACGGCGCTGTTATA
SizeHit CountTotal NormV109
Male body
49 scaffold_3324:4376-4482 - 45.61
ATTTGTTTTCGGTTGTTTTCT---TATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTC---------TG----AGGGAGTGA---
CTTTCCTTTGGGCTTATATTTAATTATTT--TTATATATATTTATAAATGTGTCATATAT----C----------------------------------------------TATAAGACCACATTTATTTTCCCCCTCTTATTATGTAGGGAAAGAAAA
SizeHit CountTotal NormV109
Male body
139 scaffold_15067:43025-43128 - 45.47
ATTTGTTTTCGGTTGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTC-------------TGAGGGAGTGA
CTTTCCTTTGGGTTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATAT----------------------ATGTATAA----------------------------GACCACATTTATTTTCGCCCTATTTTTATGTAGGGAAAGA
SizeHit CountTotal NormV109
Male body
112 scaffold_14882:11820-11924 - 45.27
ATTTGTTTTCGGTTGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTG--------------AGGGAGTGA
CTTTCCTTTGGGTTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATATA----------------------T----------------------------GTATGAGACCACATTTATTTTCTCCCTCTTTTTTATGTAGGGAAAGA
SizeHit CountTotal NormV109
Male body
72 scaffold_7670:2454-2557 - 44.84
ATTTGTTTTCGGTTGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCT-------------GAGGGAGTGA
CTTTCCTCTGGGTTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATATA----------------------TGTATAA----------------------------GACCACATTTATTTTCCCCCTCTTTTTATGTAGGGAAAGA
SizeHit CountTotal NormV109
Male body
43 scaffold_3142:3027-3129 - 43.54
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTC-------------TGAGGGAGTGA
TTTTCTTTGGGCTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATAT----------------------ATGTATAAGACCACATT----------------------------TATTTTCCCCCTCTTTTTATGTAGGGAAAGA
SizeHit CountTotal NormV109
Male body
27 scaffold_15100:8601-8713 + 43.43
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAA----------------------ATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
--TAGATTTTAATTCACTGCTATTTTTCGTCCATACCATTACAAATCAATGTTTTATAGCCTTTCAATAGGTTGATTAATTTAATATATTGCTACATAAAAGAAAAATAAACAA------------------------------------------------
SizeHit CountTotal NormV109
Male body
37 scaffold_156:2516-2618 - 42.29
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAAT-ACTTATCCTCT---------GAGGGAGTGA
TTTCCTTTGGGCTTATATTAAATTATTTTTATATATATTTATAAATGTGTCATAT----------------------ATGTATTAGACC-------------------------ACATTTATTTTCCCCCTCTTTTTATGTAGGGAAAGA
SizeHit CountTotal NormV109
Male body
128 scaffold_14943:3611-3710 - 41.5
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTCCTTTGGGCTTATATTTAATTATTTATATATATATTTATAAATGTGTCATAT----------------------ATGTATAAGACCACATTTATTT------------------TCCCCCACTTTTTATGTAGGGAA
SizeHit CountTotal NormV109
Male body
115 scaffold_14900:46711-46782 - 34.32
ATTTGTTTTCGGTTGTTTTCTTATT-TTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
CTTTCCTTTGGGCTTATATTTAATTATTTTTATATATATTTATAAATGTGTCATATA----TCTATAAGACCACAT-----------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
9 scaffold_8675:384-439 + 24.35
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
--------------------------------------------------------------------------------TATAATAATTAATATATATATAATTCGTTATACAGAAATACCCGTATTCGTAATAC----
SizeHit CountTotal NormV109
Male body
147 scaffold_15116:1636998-1637024 - 13.04
ATTTGTTTTCGGTTGTTTTCTTATTTTCGTATATAAAATTATAAATGGGTTACATAATGTTATATAATGCTACATAAATGTATAATATGTAACCCATTTATAATTTTATATACGAAAATACTTATCCTCTGAGGGAGTGA
TTTTGTTTTTATATATTTTTTTTTTCT-----------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
None


Generated: 04/20/2012 at 05:44:47 EDT