Possible Orthologs for sblock160004

droSim1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	chr3R:26858947-26859080 +	97.77	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTGAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ......................................TTGGTGACGTGCTGAAGGTGCGCAAC...................................................................... 26 1 1.00 1.00 0.00 0.00 0.00 .............................................................................................GCGCATACCATCGCCGGC....................... 18 1 1.00 0.00 0.00 1.00 0.00 ...................................................................TTAGACAATCGAGAGGAC................................................. 18 1 1.00 0.00 0.00 1.00 0.00
11	chr3R:1318589-1318720 -	52.59	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGC-GAGGAGTCGCCAGCTGTACAAAA CGACTTCGAGTTGATGCAGTGCCTTGGTCGCGGAGGTTTCGGAGTGGTCTTCGAAGCTAAGAACAAGCTGGATGAGAACCGGTACGCAATTAAGCGCATAACGCTACCCAATAAGGAATCTTCAAG---ACAGCG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .................AGTGCCTTGGTCGCGGAGGTT................................................................................................. 21 1 2.00 0.00 0.00 0.00 2.00 .............................................................AACGAGCTGGATGAAAAC........................................................ 18 1 2.00 0.00 0.00 1.00 1.00 .............................................................AACAAGCTGGATGAGAAC........................................................ 18 1 1.00 0.00 0.00 0.00 1.00 .........................GGTCAAGGAGGTTTCGGA............................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 .........................................................TAAGAACAAGCTGGATGAGAACC....................................................... 23 1 1.00 0.00 0.00 0.00 1.00 ...............GCAGTGCCTTGGTCGCGGAGGTT................................................................................................. 23 1 1.00 0.00 0.00 1.00 0.00
14	chr3R:9549115-9549207 -	42.85	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCG----AGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GAATTTTGAGTTCCTCAAGGTGCTCGGCAAGGGCACCTTTGGTAAGGTTATTCTGTGTCGCGAGAAG----GCAACCGCCAAGCTGTACGCGATCAA----------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .................................................ATTCTGTGTCGCGAGAAG----GC................................................................. 20 1 1.00 1.00 0.00 0.00 0.00
3	chr3R:14178026-14178201 +	32.68	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGG---TGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCAT---CAAGCG-------------CATACCATTGCCCGCGAGGAGTCGCCAGCT----------------------------------GTACAAAA GGATTCCAAGTTTCAATCGTACGTAA---ATGGCAATGGC---AATGGTGTGTACAAGATCATCAAGACACTCGGCAAGGGAAACTTTGCCAAGGTCAAGCTGGCGATTCATGTGC---CCACTGGTCGT--GAAGTGGCCATCAAGGTGATCGATAAGACGCAGCTCAATACGAGTGCACGCCAGA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ......................................................CCAGATCATxAAGACACTC.................................................................................................................. 18 1 1.00 0.00 0.00 0.00 1.00 ...............................................................................................................................................GAAGGTGATCGATAAGAT.......................... 18 1 1.00 0.00 0.00 0.00 1.00 ..............................................................................................................................................TCAAGGTGATCGACAAGC........................... 18 1 1.00 0.00 0.00 1.00 0.00 ...................................................GCCCAAGATCATCAAGAC...................................................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00

droSec1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	super_4:6028735-6028868 +	97.77	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTGAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........................................................................AACCGAGAGTACGCCATCAAGCG...................................... 23 1 1.00 1.00 0.00 0.00 .....................................................AGGCGTGCAACATTTTAGA.............................................................. 19 1 1.00 0.00 1.00 0.00 .....................................................................................................CATTGCCCGCGAGGAGTCG.............. 19 1 1.00 0.00 0.00 1.00 .....................................TTTGGTGACGTGCTGAAGGTGCGC......................................................................... 24 1 1.00 0.00 0.00 1.00 ......................TTAGGAAAGGATGCCTTT.............................................................................................. 18 1 1.00 0.00 1.00 0.00 .........................................................................TACCGAGAGTACGCCGTC........................................... 18 1 1.00 0.00 1.00 0.00
13	super_6:1400864-1400995 -	52.59	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGC-GAGGAGTCGCCAGCTGTACAAAA CGACTTCGAGTTGATGCAGTGCCTTGGTCGCGGAGGTTTCGGAGTGGTCTTCGAAGCTAAGAACAAGCTGGATGAGAACCGGTACGCAATTAAGCGCATAACGCTACCCAATAAGGAATCTTCAAG---ACAGCG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........................................................CAAGAAxAAGCTGGATGAG........................................................... 18 1 1.00 0.00 1.00 0.00 ...............................................................CAAGCTGGATGAGAACCGG..................................................... 19 1 1.00 0.00 1.00 0.00 ....................................TTTCGGAGTGGTCTTCGAAG............................................................................... 20 1 1.00 0.00 1.00 0.00 ...........................................................AGAACAAGCTGGATGAGAACCGGTA................................................... 25 1 1.00 0.00 1.00 0.00 .........................................................TAAGAACAAACTGGATGA............................................................ 18 1 1.00 0.00 1.00 0.00 ..........................................................AAGATCAAGCTGGATGAGT.......................................................... 19 1 1.00 1.00 0.00 0.00 .............ATGCAGTGCCTTGGTCGC........................................................................................................ 18 1 1.00 0.00 1.00 0.00 ...............GCAGTGCCTTGGTCGCGGAGGTT................................................................................................. 23 1 1.00 1.00 0.00 0.00 ...............GCAGTGCCTTGGTCGCGGGGGT.................................................................................................. 22 1 1.00 1.00 0.00 0.00 ........................................................................TGAGAACCGGTACGCAATTAAGCGC...................................... 25 1 1.00 0.00 1.00 0.00
9	super_0:10032158-10032250 -	42.85	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCG----AGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GAATTTTGAGTTCCTCAAGGTGCTCGGCAAGGGCACCTTTGGTAAGGTTATTCTGTGTCGCGAGAAG----GCAACCGCCAAGCTGTACGCGATCAA----------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..............................................GTTATTCTGTGTCGCGAGAAG----G.................................................................. 22 1 1.00 1.00 0.00 0.00 ........................................................................CAACCGCCAAGCTGTACGC............................................... 19 1 1.00 0.00 1.00 0.00 ....................................................CTGTGTCGCGAGAAG----GCAACCGCCA......................................................... 25 1 1.00 1.00 0.00 0.00 ...............CAAxGTGCTCGGCAAGTGC........................................................................................................ 18 1 1.00 0.00 1.00 0.00 ..................................................TTCTGGGTCGCGAAAAG----GC................................................................. 19 1 1.00 0.00 1.00 0.00 ...........................CAAGGGCACCTTTGGTAAGGTT......................................................................................... 22 1 1.00 0.00 1.00 0.00 ................................................................AAG----GCAACCGCCAAGCTGTACGC............................................... 23 1 1.00 0.00 1.00 0.00 .........................................GTAAGGTTATTCTGTGTCGCGAGAA........................................................................ 25 1 1.00 1.00 0.00 0.00
1	super_0:14778699-14778874 +	33.1	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCAT---CAAGCGC---ATACCATTGCCC-----GCGAGGAGTCGCCAGCT----G------------------------------TACAAAA GGATTCCAAGTTTCAATCGTACGTAAGTGGCAATGGCAATGGTG---TGTACAAGATCATCAAGACACTCGGCAAGGGAAACTTTGCCAAGGTCAAGCTGGCGATTCATGTGCCCACCGGTCGGGAAGTGGCCATCAAGGTGATCGATAAGACGCAGCTCAATACGAGTGCACGCCAGA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ................................................................................................................................TGGCCAxCAAGTTGATCGA................................ 18 1 2.00 0.00 2.00 0.00 ....................................................................................................................................CATCAAGGTGATCAAGAAGA........................... 20 1 1.00 0.00 1.00 0.00 ...................................................................................................................ACCGGTCGGGAAGTGGCC.............................................. 18 1 1.00 0.00 1.00 0.00 ....................................................................................TGCCAAGGTCAAGTTGGT............................................................................. 18 1 1.00 0.00 1.00 0.00 .....................................................................................................................................GTGAAGGTGATCGATAAG............................ 18 1 1.00 0.00 1.00 0.00 ............................GGCAATGGCAATGGAG---GG.................................................................................................................................. 18 1 1.00 0.00 1.00 0.00 ....................................................................................................................................CATCAAGGTGATCAAGAA............................. 18 1 1.00 0.00 1.00 0.00

droYak2 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr3R:28154940-28155073 +	94.1	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA AGAGTTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGCGACGTCCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATTCCATTGCCCGCGAGGAGTCGCCAGTTGTACAAAA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ................................................................ATTTTAGACAACCGAGAGTA.................................................. 20 1 1.00 0.00 0.00 1.00 0.00 0.00 .................TGTACTTGGGAAAGGGTGCCTTTGGC........................................................................................... 26 1 1.00 0.00 0.00 1.00 0.00 0.00 .......GAGGTGCTCATGTACTTGGGAAAG....................................................................................................... 24 1 1.00 0.00 0.00 1.00 0.00 0.00 ..............................................................................................................CGAGAAGTCGCCGGTTGT...... 18 1 1.00 0.00 0.00 0.00 1.00 0.00
9	chr3R:1692354-1692462 -	46.21	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGACTTCGAGTTGATGCAATGCCTTGGTCGCGGAGGTTTTGGAGTGGTATTCGAGGCTAAGAACAAGCTGGATGAGAACCGGTACGCGATTAAGCGCATAACGCTACCC------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .........................................................GAAGATCAAGCTGGATGAG.......................................................... 19 1 2.00 0.00 0.00 2.00 0.00 0.00 ............................................................GAACATGCTGGCTGAGAAC....................................................... 19 1 1.00 0.00 0.00 0.00 0.00 1.00 .........................................................TAAGAACAAGCTGGATGAG.......................................................... 19 1 1.00 0.00 0.00 1.00 0.00 0.00 .......GAGTTTATGCxATGCCTTGG........................................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 0.00
11	chr3R:14506760-14506852 -	42.85	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGA----GAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GAATTTTGAGTTCCTCAAGGTGCTTGGCAAGGGCACCTTTGGTAAGGTTATTCTGTGTCGCGAGA----AGGCAACCGCCAAGCTGTACGCGATCAA----------------------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...............CAAGGCGCTTGGCAAGGGT........................................................................................................ 19 1 2.00 0.00 0.00 2.00 0.00 0.00 .............................................................GAGA----AGGCAACCGCCAAGCTGTACGC............................................... 26 1 1.00 0.00 0.00 1.00 0.00 0.00 .......................TTGGAGAGGGCACCTTTGG................................................................................................ 19 1 1.00 0.00 0.00 1.00 0.00 0.00 ............TCTCAAGGTGCTTGGCAAGGGCA....................................................................................................... 23 1 1.00 0.00 0.00 1.00 0.00 0.00 .............................................GGTTATTCTGTGTCGCGAGA----AGG.................................................................. 23 1 1.00 0.00 0.00 1.00 0.00 0.00 ........................TGGAGAGGGCACCTTTGG................................................................................................ 18 1 1.00 0.00 0.00 1.00 0.00 0.00 .....................GCTTGGCAAGGGCACCTTTGGTAAGGTT......................................................................................... 28 1 1.00 0.00 0.00 1.00 0.00 0.00 ..................................................TTCTGTGTCGCGAGA----AGGCA................................................................ 20 1 1.00 0.00 1.00 0.00 0.00 0.00 .....................GCTTGGCAAGGGCACCTTTGGTA.............................................................................................. 23 1 1.00 0.00 0.00 1.00 0.00 0.00

droEre2 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
13	scaffold_4820:758228-758361 -	94.1	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA AGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTATGGTGACGTGCTAAAAGTGCGCAACATTTTGGACAACCGAGAGTACGCCATCAAGCGCATACCGTTGCCCGCGAGGAGTCGCCAGTTGTACAAAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
9	scaffold_4770:1552095-1552218 -	52.27	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCG-CGAGGAGTCGCCAGCTGTACAAAA CGACTTCGAGTTGATGCAGTGCCTCGGTCGCGGGGGTTTTGGAGTGGTCTTTGAAGCTAAGAACAAGCTTGATGAGAACCGGTACGCGATTAAGCGCATAACGCTACCCAATAAGGAATCTTCA----------- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ............GATGCAGTGCCTCGGTCGCGGGGGT.................................................................................................. 25 1 1.00 1.00 0.00 0.00 0.00 .................AGTGCCTCGGTCGCGGGGGT.................................................................................................. 20 1 1.00 0.00 0.00 0.00 1.00 .............................................................................ACCGGTACGCGATTAAGCGC...................................... 20 1 1.00 0.00 0.00 0.00 1.00
2	scaffold_4770:11451237-11451329 +	42.85	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCG----AGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GAATTTTGAGTTCCTCAAGGTGCTCGGCAAGGGCACCTTTGGTAAGGTTATTCTGTGTCGCGAGAAG----GCAACCGCCAAGCTGTACGCGATCAA----------------------------------------- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..........................................................................TGCxCCAAGCTGTACGCGA............................................. 18 1 2.00 1.00 0.00 0.00 1.00 .................................................ATTCTGTGTCGCGAGAAG----GCAACC............................................................. 24 1 1.00 0.00 0.00 0.00 1.00 .......................................TGGTAAGGTTATTCTGTGTC............................................................................... 20 1 1.00 0.00 0.00 0.00 1.00 ..ATTTTGAGTTCCTCAAGGT..................................................................................................................... 19 1 1.00 0.00 0.00 0.00 1.00

droFic1 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
11	scf7180000453782:90379-90512 -	88.22	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA AGAGTTCGAGGTGCTCATGTATTTGGGAAAGGGTGCGTTTGGGGACGTGCTGAAGGTGCGCAACATTCTGGACAACCGGGAGTACGCCATCAAACGGATTCCACTGCCCGCGAGGAGTCGCCAGTTGTACAAAA Size Hit Count Total Norm
7	scf7180000454050:930027-930164 +	54.56	GGAAT----TCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGGATAGTCTGGAGAAGATCTGCGATCTGGGCCGCGGTGCCTATGGCATTGTGGAGAAGATGCGCCACCGGCAAACCGATACGGTTCTGGCCGTCAAACGCATCCCAATGACCGTGAACATACGCGAACAGCACCGAT Size Hit Count Total Norm
13	scf7180000453850:675194-675337 -	48.38	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCG-CGAGGAGTC---------GCCAGCTGTACAAAA CGACTTCGAGCTGATGCAGTGCCTCGGCCGCGGTGGCTTCGGAGTGGTCTTTGAGGCCAAGAATAAGCTGGATGAGAACCGCTACGCTATCAAGCGCATCACGCTGCCTAATAAGGAGTCCTCCAGGCAGCGAGTTTTGCGGGA Size Hit Count Total Norm
4	scf7180000453851:1132301-1132435 +	41.71	GGAATTCGAGGTGCTCATGTA----CTTGGGAAAGGGTGCC--------------------------------------------------TTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA AGCAGCAGCAGCAGCAGCGCAGGAATGTGGCCC--GAGGTCTCCAGTATCGCGAATCCGGTGGACTCGAAACAGGCAGAGTTGGAAAGCAGCCCGCCGGCATGCTGTCGATGGACAAC--TTCCGTTTGCTGAGCGTCC------------------------------------------------- Size Hit Count Total Norm
15	scf7180000453904:1059361-1059430 -	31.82	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTG------ACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGACCTCGAGGTGGTCAGCACCCTGGGCATCGGCGGCTTCGGGCGCGTGGAGCTGGTCAAGGCGCACCAC---------------------------------------------------------------------- Size Hit Count Total Norm

droEug1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409243:23304-23437 +	86.75	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTTGAGGTGCTCATGTACTTGGGAAAAGGCGCGTTTGGGGACGTGTTGAAGGTACGCAACATTCTAGACAACCGAGAGTACGCCATCAAGCGTATACCACTTCCCGCGAGAAGTCGACAGCTGTACAAAA Size Hit Count Total Norm
12	scf7180000409766:226106-226219 -	40.6	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGACTTCGAGCTGATGCAGTGTCTCGGTCGCGGTGGTTTTGGAGTGGTCTTTGAAGCCAAGAATAAACTGGATGAAAACCGATACGCCATTAAGCGTATAACGCTA--------------------CCATATAA Size Hit Count Total Norm

droBia1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
12	scf7180000302113:90831-90964 -	88.22	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAGGTCCTTATGTACTTGGGAAAGGGCGCCTTTGGGGACGTGCTGAAGGTGCGCAATATTCTGGACAACCGAGAGTACGCCATCAAGCGGATACCACTGCCCGCGAGGAGTCGCCAGCTCTACAAGA Size Hit Count Total Norm
7	scf7180000301786:83931-84054 +	51.52	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCG-CGAGGAGTCGCCAGCTGTACAAAA TGACTTTGAACTGATGCAGTGCCTTGGTCGCGGCGGTTTTGGAGTGGTTTTCGAAGCGAAGAATAAGCTGGACGAGAACCGGTATGCCGTAAAGCGCATAACGCTGCCCAATAAGGAATCTTCA----------- Size Hit Count Total Norm
3	scf7180000301501:483597-483727 +	51.46	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCAT-ACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA TGACTTTGAAGAGATTGCAGTTTTAGGCCAGGGCGCATTTGGACAAGTTGTCAAGGCACGTAATGCTCTCGATAGCAGATACTATGCGATCAAGAAGATTAGACATACAGAAGAAAAGTTATCTACTATAT---- Size Hit Count Total Norm

droTak1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000415286:363235-363368 +	84.54	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAGGTGCTCATGTATTTGGGCAAGGGCGCCTTCGGGGATGTGCTGAAGGTGCGCAACATTCTGGACAACCGGGAGTACGCCATCAAGCGGATTCCACTGCCCGCGCGGAGTCGTCAGCTCTACAAGA Size Hit Count Total Norm
7	scf7180000415789:75164-75295 +	52.59	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCG-CGAGGAGTCGCCAGCTGTACAAAA TGACTTTGAGCTGATGCAGTGCCTCGGACGTGGCGGTTTCGGAGTGGTTTTCGAAGCCAAGAATAAGCTGGACGAGAACCGGTATGCTATAAAGCGCATAACGCTGCCCAATAAGGAGTCCTCAAG---GCAGCG Size Hit Count Total Norm
1	scf7180000413998:79623-79731 +	46.97	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA --------------------ATCTGGGACGCGGCGCCTACGGGATTGTGGAGAAGATGCGCCACCGGCAGACCGACACGGTGCTCGCCGTCAAGCGAATCCCAATGACGGTGAACATACGCGAACAGCA----- Size Hit Count Total Norm
21	scf7180000415856:425725-425818 -	37.51	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGT----GCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGATCTCGAGGTGGTCAGCACTCTGGGCATCGGTGGCTTTGGCCGCGTGGAGCTGGTCAAGGCGCATCATCAGA------------------ATCGCGTGGATACCTTTGCC-------------------------- Size Hit Count Total Norm

droEle1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scf7180000491194:1243055-1243188 +	83.8	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTTGAAGTACTCATGTACTTGGGCAAAGGGGCCTTCGGAGACGTTTTAAAGGTGCGCAACATTCTGGACAACCGGGAGTACGCCATTAAGCGGATACCACTGCCCGCGAGGAGTCGCCAGTTGTACAAGA Size Hit Count Total Norm
1	scf7180000491021:181447-181566 +	57.58	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCG-CGAGGAGTCGCCAGCTGTACAAAA GGACTTCGAGCTGATGCAGTGCCTCGGTCGTGGTGGCTTCGGTGTGGTGTTTGAGGCCAAGAACAAGCTAGATGAGAACCGGTACGCCATTAAGCGCATTACGTTGCCCAATAAGGAGTC--------------- Size Hit Count Total Norm
13	scf7180000491107:839298-839356 -	28.79	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CCGATTCGAGATCATCGAGGAGCTGGGCAAAGGTCGCTTTGGCACCGTCTTCAAGGTGC--------------------------------------------------------------------------- Size Hit Count Total Norm

droRho1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
16	scf7180000777206:96215-96348 -	84.54	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAAGTGCTCATGTATTTGGGAAAGGGCGCCTTCGGGGACGTGCTGAAGGTGCGCAACATTCTGGACAACCGGGAGTACGCCATCAAGCGGATACCACTACCTGCGCGAAGTCGTCAGCTGTACAAGA Size Hit Count Total Norm
15	scf7180000776842:8132-8240 -	53.03	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGACTTCGAGCTGATGCAGTGCCTCGGACGAGGCGGCTTTGGGGTGGTATTTGAGGCCAAGAACAAGCTAGATGAGAACCGGTACGCCATCAAGCGCATAACGTTGCCC------------------------- Size Hit Count Total Norm
1	scf7180000767553:61797-61895 +	39.71	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACG------TGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAG------CGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGACCTCGAGGTGGTCAGCACCTTGGGCATCGGTGGCTTTGGCCGAGTGGAGTTGGTCAAGGCC--------------------------CACCATCAAGACCGTGTGGACACCTTTGCCCTC---------------------AA Size Hit Count Total Norm
10	scf7180000779911:263617-263675 +	29.55	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GCGATTCGAGATAATCGAGGAGTTGGGCAAAGGACGCTTTGGCACCGTCTTCAAGGTGC--------------------------------------------------------------------------- Size Hit Count Total Norm

droKik1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
7	scf7180000302268:103445-103578 -	76.45	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAGGTGCTTATGTATTTAGGAAAAGGAGCTTTTGGGGATGTCCTAAAAGTACGCAATATCCTGGACAACCGGGAGTATGCCATCAAGCGGATACCGCTACCCGCTCGCAGCCGGCAGCTATACAAGA Size Hit Count Total Norm
12	scf7180000302461:707063-707194 -	55.56	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGACTTTGAGCTGATGCAGTGCCTCGGACGCGGTGGCTTCGGCGTGGTCTTTGAGGCCAAGAACAAGCTGGACGAGAATAGGTATGCCATTAAGCGCATCACGCTGCCCAACAA--GGAGGCTTCCAGGCAACG Size Hit Count Total Norm

droAna3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
10	scaffold_13340:5106925-5107058 +	77.92	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGAGTTTGAGGTCCTAATGTATCTGGGCAAGGGCGCCTATGGCGATGTGCTGAAAGTCCGCAACATTCTCGACAACCGGGAGTATGCAATCAAACGAATACCTCTGCCTGCTCGAAGTCGCCAGCTGTACAAGA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .GAGTATGAGGTCCTAGTGT.................................................................................................................. 19 1 1.00 1.00 0.00 0.00 0.00
8	scaffold_13340:3908201-3908328 +	52.44	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGATTTTGAACTGATGCAGTGCCTCGGCCGCGGCGGATTTGGTGTGGTTTTCGAGGCGAAAAATAAGCTGGACGAGAACCGCTACGCCATAAAGCGAATAACGTTGCCTAACAAGGA------CTCATCCAGGC Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .........................GGCCGAGGCGGGTTTGGT........................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 .......................................TGGTGTGGTTTTCGAGGCGAAAA........................................................................ 23 1 1.00 0.00 1.00 0.00 0.00 .......................................TGGTGTGGTTTTCGAGGCG............................................................................ 19 1 1.00 1.00 0.00 0.00 0.00 .................................................................AGCTGGACCAGAATCGCT................................................... 18 1 1.00 0.00 0.00 0.00 1.00 .......................................................................................CATAAAGCGAATAACGTTGC........................... 20 1 1.00 1.00 0.00 0.00 0.00 .............................................................................................GCGAATAACGTTGCCTAACA..................... 20 1 1.00 0.00 0.00 0.00 1.00 ...................................................CGAGGCGAAAAATAAGCTGGACGAG.......................................................... 25 1 1.00 1.00 0.00 0.00 0.00

droBip1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
11	scf7180000396359:88597-88730 -	75.72	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGAGTTTGAGGTCATCATGTATCTTGGCAAGGGTGCCTATGGGGATGTGTTGAAAGTTCGCAACAATCTCGACAACCGGGAGTATGCGATCAAACGAATACCTCTGCCTGCTCGAAGTCGCCAGCTATACAAGA Size Hit Count Total Norm
16	scf7180000396570:601480-601607 -	49.56	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA TGACTTTGAACTGATGCAGTGCCTCGGCCGGGGCGGATTCGGTGTGGTTTTCGAGGCCAAAAATAAGCTGGACGAGAACCGGTACGCCATAAAAAGGATTACGTTACCCAACAAGGA------CTCTTCCAGGC Size Hit Count Total Norm
23	scf7180000396721:636602-636729 -	45.93	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGC------------GCAACATTTTAGACAACCGAGAGTACGCCATCAAGC--GCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA C------CAGGGCCTCCAGCCTGTGGGATCAGGAGCTTATGGTCAAGTTTCCAAGGCTATGATAAGAGGAACCAACATG---------CAAGTGGCCATTAAAAAGTTGGCACGCCCTTTTCAGTCAGCCGTCCAC-----GCCAAAC Size Hit Count Total Norm

dp4 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2:4422100-4422233 +	82.33	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAGGTGCTCATGTATCTGGGCAAGGGCGCCTTCGGGGACGTCCTGAAGGTGCGCAACATCCTGGACAACAGGGAGTATGCCATCAAGCGCATACCCCTGCCCGCCCGCAGTCGCCAGCTGTACAAGA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .......................................................................................CATCAAGCGCATGCCCCTGC........................... 20 1 1.00 0.00 1.00 0.00 0.00
4	chr2:21313599-21313729 +	51.43	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCC-GCGAGGAGTCG-----CCAGCTGTACAAAA CGATTTTGATCTGATGACATGCCTGGGTCGCGGCGGGTTCGGTGTGGTATTCGAGGCCAAGAATAAGCTGGATGAGAATCACTATGCCGTCAAGCGGATAACGCTGCCAAATAAGGAGTCATCCCGGCAG---------C Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .............................................................................ATCACTATGCCGTCAAGCGGATAACGCT................................... 28 1 1.00 0.00 1.00 0.00 0.00 ....................................................GATGCCAAGAAGAAGCTGG..................................................................... 19 1 1.00 0.00 1.00 0.00 0.00 .............................................................................................................AATAAGGAGTCATCCCGGC............ 19 1 1.00 0.00 0.00 1.00 0.00
20	chrXL_group1a:1067089-1067201 -	45.66	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAG---------AGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GCAGTTCGAGCTGCTGCGCGTGCTGGGCGAGGGTAGCTTCGGTAAGGTGTTCCTCGTGCGCAAGATAATTGGCAAGGATGCGGGCACCCTGTACGCGATGAAG------------------------------GTGCTGAAGA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ......CGAGCTGCTGCGCGTGCTGGGCGAGG............................................................................................................... 26 1 1.00 0.00 1.00 0.00 0.00
6	chr4_group3:472415-472535 +	44.49	G--GAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GACGACTTCGAGCGGATCAAGACGCTCGGGACGGGCTCCTTTGGCCGCGTGATGATCGTCCAGCACAAGCCCACGAAAGACTACTACGCCATGAAGATCCTC-----------GACAAGCAGAAGGTCGTC----A Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .........................................TGGCCGCGTGATGATCGTCCAGCAC...................................................................... 25 1 2.00 0.00 2.00 0.00 0.00 .............GGATCAAGACGCTCGGGACGGTCTC.................................................................................................. 25 1 1.00 1.00 0.00 0.00 0.00 .......................GCTCGGGACGGGCTCCTTTGGCC.......................................................................................... 23 1 1.00 0.00 1.00 0.00 0.00 ...................AGACGCTCGGGACGGGCTCCT................................................................................................ 21 1 1.00 1.00 0.00 0.00 0.00 ...........GCGGATCAAGACGCTCGGGACGGGCTCC................................................................................................. 28 1 1.00 0.00 1.00 0.00 0.00
10	chr4_group3:8945912-8945981 +	31.82	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGT------GCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGATCTCGAGGTGGTCAGCACCCTGGGCATCGGGGGCTTCGGCCGCGTGGAGCTGGTCAAGGCGCACCAC---------------------------------------------------------------------- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .......................TGGCCATCGAGGGCTTCGGC................................................................................................. 20 1 1.00 0.00 0.00 1.00 0.00

droPer1 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
13	super_19:124572-124705 +	82.33	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAGGTGCTCATGTATCTGGGCAAGGGCGCCTTCGGGGACGTCCTGAAGGTGCGCAACATCCTGGACAACAGGGAGTATGCCATCAAGCGCATACCCCTGCCCGCCCGCAGTCGCCAGCTGTACAAGA Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ...........................................GACGGCCTGGAGGTGCGCAA....................................................................... 20 1 1.00 0.00 0.00 0.00 1.00 0.00 ................................................................................................................CGCAGTCGCCAxCTGTACT... 18 1 1.00 0.00 0.00 0.00 0.00 1.00 .......................................................................................CATCAAGCGCATGCCCCTT............................ 19 1 1.00 0.00 1.00 0.00 0.00 0.00
5	super_3:4095627-4095757 +	51.43	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCC-GCGAGGAGTCG-----CCAGCTGTACAAAA CGATTTTGATCTGATGACATGCCTGGGTCGCGGCGGGTTCGGTGTGGTATTCGAGGCCAAGAATAAGCTGGATGAGAATCACTATGCCGTCAAGCGGATAACGCTGCCAAATAAGGAGTCATCCCGGCAG---------C Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ............................................................GAAGAAGCTGGATGAGGA.............................................................. 18 1 2.00 0.00 0.00 0.00 0.00 2.00 ..........................................................GAGAAGAAGCTGGATGAG................................................................ 18 1 2.00 2.00 0.00 0.00 0.00 0.00 ...................................................CGAGGCCAAGAATAAGCTGGATGAGA............................................................... 26 1 2.00 0.00 0.00 0.00 0.00 2.00 ................................................ATTCGAGGCCAAGAATAAGCTGGATGAGA............................................................... 29 1 1.00 0.00 0.00 0.00 0.00 1.00 ................................................ATTCGAGGCCAAGAATAAGCTGGATGAGG............................................................... 29 1 1.00 0.00 0.00 0.00 0.00 1.00
23	super_26:1180096-1180208 -	45.02	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAG---------AGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GCAGTTCGAGCTGCTGCGCGTGCTGGGCGAGGGTAGCTTCGGTAAGGTGTTCCTCGTGCGCAAGATAATTGGCAAGGATGCGGGCACCCTGTACGCGATGAA------------------------------AGTGCTGAAGA Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo .........GCTGCTGCGCGTGCAGGGC................................................................................................................... 19 1 2.00 0.00 0.00 0.00 0.00 2.00 ........AGCTGCTGCGCGTGCTGGGCGAGG............................................................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 0.00 ........................................................................................CTGTACGCGATGAA------------------------------AGTGC...... 19 1 1.00 0.00 1.00 0.00 0.00 0.00 ....TTCGAGCTGCTGCGCGTGCTGGGC................................................................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................GGGTAGGTTCxGTAAGGTG.............................................................................................. 18 1 1.00 0.00 0.00 0.00 1.00 0.00
1	super_1:1948070-1948190 +	44.49	G--GAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GACGACTTCGAGCGGATCAAGACGCTCGGGACGGGCTCCTTTGGCCGCGTGATGATCGTCCAGCACAAGCCCACGAAAGACTACTACGCCATGAAGATCCTC-----------GACAAGCAGAAGGTCGTC----A Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ................................................GTGATGATCGTCCAGCACAAGC.................................................................. 22 1 4.00 0.00 0.00 0.00 0.00 4.00 ........................................................................................CCATGAGGATCTTC-----------GACA................... 18 1 3.00 0.00 0.00 0.00 0.00 3.00 ..........................................GGCCGCGTGATGATCGTC............................................................................ 18 1 2.00 0.00 0.00 0.00 0.00 2.00 ..................................................GATGATCGTCCAGCACAAGC.................................................................. 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ........................................................................................CCATGAAGATCCTC-----------GACAAGCAG.............. 23 1 1.00 0.00 0.00 0.00 1.00 0.00 ...........GCGGATCAAGACGCTCGGGAC........................................................................................................ 21 1 1.00 0.00 0.00 0.00 0.00 1.00
10	super_8:130005-130074 +	31.82	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGT------GCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GGATCTCGAGGTGGTCAGCACCCTGGGCATCGGGGGCTTCGGCCGCGTGGAGCTGGTCAAGGCGCACCAC---------------------------------------------------------------------- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ...................ACTCTGGGCATCGGGGGA....................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 0.00 ........................GGCCATCGAGGGCTTCGGC................................................................................................. 19 1 1.00 0.00 0.00 0.00 1.00 0.00

droWil1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scaffold_181108:3264632-3264765 +	80.13	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAATTCGAAGTGCTTATGTATCTGGGCAAGGGTGCCTTTGGGGATGTCCTCAAGGTGCGCAATATTCTGGACAATCGTGAGTATGCCATCAAGCGCATTCCCTTGCCGGCGCGCAGTCGTCAATTGTACAAGA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ...........................CAAGGGTGCCTATGAGGA......................................................................................... 18 1 16.00 0.00 16.00 0.00 0.00 ...............GATGxATCTGGGCAAGGGT.................................................................................................... 18 1 4.00 3.00 1.00 0.00 0.00 ...............GATGxATCTGGGCAAGGGTG................................................................................................... 19 1 4.00 0.00 4.00 0.00 0.00 ....................................................GATGTGCGCAATATTCTG................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 ......................................................................................CCATCAAGCGCATGCCCCTGC........................... 21 1 1.00 0.00 1.00 0.00 0.00
13	scaffold_181130:7912495-7912617 -	49.37	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA GAACTTTGAGTTCCTCAAGGTGCTGGGAAAAGGCGCTTTTGGCAAGGTGATCCTGTGTCGTGAGAAATCCACAGCCAAATTGTACGCAATTAAAA-----------TTCTCAAAAAGGAGGTCATTATACAGAA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ...........TTCTxAAGGTGCTGGGAAA........................................................................................................ 18 1 1.00 0.00 1.00 0.00 0.00 ..........TTCCTCACGGTGCTGGGAAAAGGC.................................................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 .........................GGAAAAGGAGCTTTTGGCC.......................................................................................... 19 1 1.00 0.00 1.00 0.00 0.00 ........................................................................AGCAAAATTGTACACAAT............................................ 18 1 1.00 0.00 1.00 0.00 0.00 ..............................................GTGATCCTGTGTCGTGAGA..................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 ...............CAAGGTGCTGGGAAAAGGC.................................................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 ........AGTTCCTCAAAGTGCTGGGTA......................................................................................................... 21 1 1.00 0.00 1.00 0.00 0.00 ................................................GATCCTGTGTCGTGAAAAATCCACAGCC.......................................................... 28 1 1.00 1.00 0.00 0.00 0.00 ........AGTTCCTCAAGGTGCTGGGAAA........................................................................................................ 22 1 1.00 1.00 0.00 0.00 0.00 ...........................AAAAGGCGCTTTTGGCAAGGTG..................................................................................... 22 1 1.00 0.00 0.00 1.00 0.00

droVir3 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13047:12625472-12625605 +	76.45	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAGGTTCTCATGTATTTGGGCAAAGGCGCATTTGGCGATGTGTTAAAAGTGCGCAACATACTGGATAACCGGGAATATGCAATCAAACGTATACCACTCCCGGCGCGCAGTCGCCAGCTATATAAGA Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ..........................................................................................CAAACGTATACCACTCACTG........................ 20 1 3.00 0.00 0.00 1.00 2.00 0.00 .....................................................................GGGTAACGGGGAATATG................................................ 17 1 1.00 0.00 1.00 0.00 0.00 0.00 .........GGTTCTCATGTATTTGGGCAAAGGC.................................................................................................... 25 1 1.00 0.00 0.00 1.00 0.00 0.00
5	scaffold_12855:10004284-10004414 -	51.46	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGC-GAGGAGTCGCCAGCTGTACAAAA TGACTTCGATCTAATGCAATGTCTTGGCCGAGGGGGCTTTGGTGTCGTTTTTGAAGCAAAAAACAAGTTGGATGAGAACCATTATGCGATTAAACGTATAACGTTGCCCAATAAGGAGTCATC----GCGGCAGC Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ...............................................................CAAGTTGGATGAGAACCATTATGCGA.............................................. 26 1 1.00 0.00 0.00 0.00 0.00 1.00 .............................................................................................................AATAAGGCGTCCTC----GCGGC... 19 1 1.00 1.00 0.00 0.00 0.00 0.00 ....................GTCTTGGCCGAGGGGGCTTTGGT............................................................................................ 23 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................ACAAGCCGGATGAGAACC....................................................... 18 1 1.00 0.00 0.00 0.00 0.00 1.00 ......................................................................................................................................C 19 9 0.11 0.00 0.00 0.00 0.00 0.11
10	scaffold_13049:8322467-8322623 -	44.98	GGAA----TTCGAGGTG------------CTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCG---CATACCAT----TGCCCGCGAGGAGTCGCCAGCTGTACAAAA AGAGCCATTTCGAGGAGTGTTTCGAGCGTTTGGCAAAGCTGGGCGAGGGCTCCTTTGGTGAGGTGTTCCAGGTGCGAGATCGTTCCGACAGCCGGCTGTATGCGGTCAAAATCTCCAAACAACTGTTTCGTGGCGAACAGTATCGGGCTGAGCGACT Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head .........................................................................GCGAGATCGATCTGACAG.................................................................. 18 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TGAGCTGTCCCAGGTGCG................................................................................. 18 1 1.00 1.00 0.00 0.00 0.00 0.00 ............................TTTAGCAAAGCTGGTCGA............................................................................................................... 18 1 1.00 0.00 0.00 0.00 0.00 1.00

droMoj3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
11	scaffold_6540:29210574-29210707 -	81.6	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCCGCGAGGAGTCGCCAGCTGTACAAAA CGAGTTCGAGGTGCTCATGTATTTGGGCAAAGGCGCCTTTGGGGATGTGCTAAAGGTTCGCAATATACTGGACAATCGGGAGTATGCCATCAAACGTATACCACTGCCCGCCCGCAGTCGCCAGCTGTACAAGA Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo
9	scaffold_6540:3959793-3959923 -	54.4	GGAATTCGAGGTGCTCATGTACTTGGGAAAGGGTGCCTTTGGTGACGTGCTAAAGGTGCGCAACATTTTAGACAACCGAGAGTACGCCATCAAGCGCATACCATTGCCC-GCGAGGAGTCGCCAGCTGTACAAAA AGACTTCGACCTGATGCAATGCCTGGGTCGAGGCGGATTTGGTGTGGTCTTTGAGGCAAAGAACAAGTTGGATGAAAATCATTATGCGATCAAACGTATAACATTGCCGAATAAGGAGTCCTCGCGTCAAC---- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo .............................................................ATCAAGTTGGATTAAAATCA...................................................... 20 1 7.00 7.00 0.00 0.00 0.00 .............................................................ATCAAGTTGGATTAAAATC....................................................... 19 1 6.00 6.00 0.00 0.00 0.00 .............................................................ATCAAGTTGGATTAAAAT........................................................ 18 1 1.00 0.00 1.00 0.00 0.00 ..........CTGATGCAATGCCTGGGTCGA........................................................................................................ 21 1 1.00 1.00 0.00 0.00 0.00 .....................CCTGGGTCGATGTGGATT................................................................................................ 18 1 1.00 0.00 1.00 0.00 0.00 ........................GGGTCGAGGCGGATTTGGTGT.......................................................................................... 21 1 1.00 1.00 0.00 0.00 0.00 ..................................................................................................TAACATTGCCGAATAAGGAGTCCTCGC.......... 27 1 1.00 1.00 0.00 0.00 0.00