Possible Orthologs for sblock154733

droSim1 - 9 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
64	chr3R_random:984803-984937 +	92.69	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TACACCATGAACAACATAAGATATATTCGGTCTACAAACTGAAGCTTAATTGTGATTTAAGGATGTGTATTTTTTAGCACTAAAAAATCACAATTTAGCCAATTTGTAGGTCGAT-AAAAACCACACAACTCTCAC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ....................ATATATTCGGTCTACAAAC................................................................................................. 19 1 41.00 0.00 28.00 13.00 0.00 ...................GATATATTCGGTCTACAAAC................................................................................................. 20 1 4.00 0.00 3.00 1.00 0.00 .......................................TGAAGCTTAATTGTGATTTAAGGAT........................................................................ 25 1 3.00 0.00 1.00 1.00 1.00 ..............................................................................................TTAGCCAATTTGTAGGTC........................ 18 1 2.00 0.00 0.00 1.00 1.00 .....................TATATTCGGTCTACAAAC................................................................................................. 18 1 2.00 0.00 2.00 0.00 0.00 .........................................................TAACGATGTGTTTTTTTT............................................................. 18 1 1.00 1.00 0.00 0.00 0.00 ..............CATAAGATATATTCGGTCTACA.................................................................................................... 22 1 1.00 0.00 0.00 0.00 1.00 ....................ATATATTCGGTCTACAGAC................................................................................................. 19 1 1.00 0.00 1.00 0.00 0.00 .......................................TGAAGCTTAATTGTGATTTAAGGG......................................................................... 24 1 1.00 0.00 0.00 1.00 0.00 .................AAGATATATTCGGTCTACAAAC................................................................................................. 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................AAGGATGTGTATTTTTTAGCA......................................................... 21 1 1.00 0.00 1.00 0.00 0.00 ...............ATAAGATATATTCGGTCTACAAAC................................................................................................. 24 1 1.00 0.00 1.00 0.00 0.00
79	chrX:4818941-4819088 +	43.2	TACACCATGAACA---------ACATAAGATTT---ATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACA-ATT--TAGCCACTTTGTAGGTCGATGAAACAGCTC--ACAACTCTCAC TGAACAGCGAACATGCATTTATGTATGAAATTTGTCATTTGATAGAAAAACACAAA--TATTTGTCATCGAGAAACTTGCTTCATTT---AATTAAAGGCAAAATATTTGTTTCCACTTTTGAACGAAATTCATCAATTTGTGCACTTTTTAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ....................ATGTAxGAAATTTGGCATT.................................................................................................................. 18 1 2.00 0.00 0.00 2.00 0.00 ......GAGAAAATGCATTTATGT................................................................................................................................. 18 1 1.00 0.00 1.00 0.00 0.00 ......GAGAAAATGCATTTATGTAT............................................................................................................................... 20 1 1.00 0.00 0.00 0.00 1.00
337	chrX_random:5692892-5692999 -	39.04	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAA-------GCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC ---------------ATAAGGTTGGTTGGAGAAATTAGCTCAATCACGTGGACTATTTGCCATTCATT-ACATTTAGCTGTTCGCCCTTAAAAATATCAATT---------AGTACCTAAA---AACAAGAC-------ACAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..........................................................GCCATTCATA-ACGTTTAGCT................................................................ 20 1 1.00 0.00 0.00 1.00 0.00
189	chr2R:9614135-9614226 -	34.33	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTT----TAGCAGTTA-----AAAATCACA---ATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC ------------------------------------------------------ATGCATAGATATGAATTTTCACAGTAACTGGCAAATATAAAACTATAACCTTTTTACCATTTTGTATG--GCCTAAACTACTTTTTTTCGGTGC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .......................................................................................AATATAAAACTGTAAACT........................................... 18 1 6.00 0.00 2.00 1.00 3.00 ......................................................................................AAATATAAAACTGTAAACT........................................... 19 1 3.00 0.00 0.00 3.00 0.00 .................................................................TGAAxTTTAACAGTAACTG................................................................ 18 1 1.00 0.00 1.00 0.00 0.00
259	chrX:3861957-3862036 -	33.58	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TACAACACGCAATGTGTAATAGTTATTTGATAATCTACCTGTTATTGACCTCATTTTTATGTGTGTGTGTGTGTGAGCGG-------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .....................................................TTTATACGTGTGTGTGTGTG............................................................... 20 2 0.50 0.50 0.00 0.00 0.00 .............................................................TGTGTGTGTGTGTGAGTG......................................................... 18 5 0.20 0.00 0.20 0.00 0.00 ...........................................................TGTGTGTGTGTGTGTGAGC.......................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ...........................................................TGTGTGTGTGTGTGTGTGCGT-------------------------------------------------------- 21 3 0.33 0.33 0.00 0.00 0.00 ......................................................GTTTATGTGTGTGTATGT................................................................ 18 2 0.50 0.00 0.00 0.00 0.50 .........................................................TGTGTGTGTGTGTGTGTG............................................................. 18 40 0.03 0.03 0.00 0.00 0.00 ........................................................TTACGTGTGTGTGTGTGT.............................................................. 18 1 1.00 0.00 0.00 0.00 1.00 ...............................................................TGTGTGTGTGTGTGTGG-------------------------------------------------------- 18 10 0.10 0.10 0.00 0.00 0.00 .......................................................TGTGTGTGTGTGTGTGTG............................................................... 18 40 0.03 0.03 0.00 0.00 0.00 .............................................................TGTGTGTGCGTGTGAGCG......................................................... 18 8 0.13 0.13 0.00 0.00 0.00 .............................................................TGTGTGTGTGTGTGTGTG......................................................... 18 40 0.03 0.03 0.00 0.00 0.00 ............................................................ATGTGTCTGTGTGTGAGC.......................................................... 18 6 0.17 0.00 0.00 0.17 0.00 ..............................................................GTGCGTGTGTGTGAGTGG-------------------------------------------------------- 18 3 0.33 0.33 0.00 0.00 0.00 ...........................................................TGTGTGTGTGTGTGTGGT........................................................... 18 10 0.10 0.10 0.00 0.00 0.00 .........................................................TGTGTGTGTGTGTGTGTGT............................................................ 19 34 0.03 0.03 0.00 0.00 0.00 ...........................................................TGTGTGTGTGTGTGTGTG........................................................... 18 40 0.03 0.03 0.00 0.00 0.00 .......................................................TTTTTCTGTGTGTGTGTGT.............................................................. 19 2 0.50 0.50 0.00 0.00 0.00 .............................................................TGTGTGTGTGTGTGTGTGG-------------------------------------------------------- 19 19 0.05 0.05 0.00 0.00 0.00 ...........................................................TGTGTGTGTGTGTGTGTGG.......................................................... 19 19 0.05 0.05 0.00 0.00 0.00 ......................................................TGTTGTGTGTGTGTGTGTGT.............................................................. 20 3 0.33 0.33 0.00 0.00 0.00 .........................................................TGTGTGTGTGTGTGTGTGTGCG......................................................... 22 2 0.50 0.50 0.00 0.00 0.00 ...........................................................TGTGTGTGTGTGTGTGTGT.......................................................... 19 34 0.03 0.03 0.00 0.00 0.00 .......................................................TGTCTGTGTGTGTGTGTGT.............................................................. 19 14 0.07 0.07 0.00 0.00 0.00 .........................................................TATGTGTGTGTGTGAGTGC............................................................ 19 10 0.10 0.00 0.00 0.10 0.00 .......................................................TGTGTGTGTGTGTGTGTGT.............................................................. 19 34 0.03 0.03 0.00 0.00 0.00 .....................................................TTTTTCTGTGTGTGTGTGT................................................................ 19 2 0.50 0.50 0.00 0.00 0.00 .........................................................TGTGTGTGTGTGTGTGTGG............................................................ 19 19 0.05 0.05 0.00 0.00 0.00 .......................................................TTTATACGTGTGTGTGTGTG............................................................. 20 2 0.50 0.50 0.00 0.00 0.00
182	chr2L:13394118-13394177 -	29.85	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTT-ATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TACTTGATCAACTTCATTCCATTTATTCAATTTACAAATTTGAACTGAAAAGTGCATTTA----------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo
295	chrX:6128129-6128173 -	18.66	TACACCATGAACAACA--TAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TGCACCGCAAACGATTGAAAATATTTGTATAGACACGAAATTAAA--------------------------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo
296	chrX:6135850-6135868 -	8.96	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC AAACTCAGCAACAACACAA--------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo		None
191	chr2R:9873709-9873710 -	1.49	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC AC-------------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo	None	None

droSec1 - 7 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
83	super_0:20852363-20852498 +	92.01	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TACACCATGAACAACATAAGATATATTCGGTCTACAAACTGAAGCTTAATTGTGATTTAAGGATGTGTATTTTTTTGCACTAAAAAATCACAATTTAGCCAATTTGTAGGTCGATGAAAAACCACACAACTCTCAC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ........................................................TTTAGGATTTGTATTTTT.............................................................. 18 1 2.00 0.00 2.00 0.00 ............................................................................................ATTTAGCCAATTTGTAGGTC........................ 20 1 1.00 0.00 1.00 0.00 ....................................................................ATTTGTTCGCACTAAAAA.................................................. 18 1 1.00 0.00 1.00 0.00 .........................................................................................................GTGGGTCGATGAAGAACC............. 18 1 1.00 0.00 0.00 1.00
550	super_44:18470-18604 -	43.27	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAA-----------------------------------AAATCACAATTTAGCCACTTTGTAG-----GTCGATGAAACAGCTCACAA-CTCTCAC CAAA----------------TTTCCTTCGGTTAGCAAA-TGAT---TCTTCGCAATTTTT---------------------TAAAAATCACTTACCATCTCGCTTATTATTTTGTATTAAAATTACGATTATGATGAT-GATGGATCGTGGCGACAAAGATGTCCGCACATGTTTCC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................................................................................................................TGACGATGATGATGAT-GAT................................... 19 21 0.05 0.00 0.00 0.05 .......................................................................................................................................GAT-GATGGATCGTGGCGA....................... 18 1 1.00 0.00 1.00 0.00 ........................................................................................................................AATGACGATGATGATGAT-...................................... 18 10 0.10 0.00 0.00 0.10 ...................................................................................................................................TGATGAT-GATGGATCGTGGCGACA..................... 24 1 1.00 0.00 0.00 1.00 .........................................................................................................................ATGACGATGATGATGAT-GAT................................... 20 16 0.06 0.06 0.00 0.00 ............................................................................................................................ACGATGATGATGAT-GACGG................................. 19 4 0.25 0.00 0.25 0.00 ......................................................................................................................................TGAT-GATGGATCGTGGCGACA..................... 21 1 1.00 0.00 0.00 1.00 ...........................................................................................................................GACGATGATGATGAT-GAT................................... 18 23 0.04 0.00 0.04 0.00 .......................CCTTCGGTTAGCAAA-TGAT---TCTTCGC............................................................................................................................ 26 1 1.00 0.00 1.00 0.00 .........................................................................................................................ATGACGATGATGATGAT-GATG.................................. 21 16 0.06 0.00 0.06 0.00 .................................................................................................................................TATGATGAT-GATGGATCGTGG.......................... 21 1 1.00 0.00 1.00 0.00 ...........................................................................................................................TACGATTATGATGAT-GATGGATCGT............................ 25 1 1.00 1.00 0.00 0.00 .......................................................................................................................................GAT-GATGGATCGTGGCGAC...................... 19 1 1.00 0.00 1.00 0.00 .....................................................................................................................................CTGAT-GATGGATCGTGGT......................... 18 1 1.00 0.00 0.00 1.00 .AAA----------------TTTCCTTCGGTTAGC.............................................................................................................................................. 18 1 1.00 0.00 1.00 0.00
313	super_0:6121332-6121454 -	41.21	TACACCAT---GAACAACATAAGATTTATTCGGTCTACAAACTGAAGC---------TTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTT-AAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAAC-------AGCTCACAACTCTCAC CATTCCAAATTAAATACTAAAAAATTCGTACAGTTAAAAAGCATGGGAATTTGTAATT-------------------------------CAATTAGAAGAGCAAAATTCGGCGAAT--GGAATTTGATTACATGTTTTATTGTTCATGACCCGGAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...........................GAACAGTTAAAAAGCATT............................................................................................................... 18 1 4.00 0.00 4.00 0.00 .................................................................................................................AAT--GGAAGATGATTACAT....................... 18 1 1.00 0.00 1.00 0.00 ..........................CGAACAGTTAAAAAGCAT................................................................................................................ 18 1 1.00 0.00 1.00 0.00 ..........................CGAACAGTTAAAAAGCATT............................................................................................................... 19 1 1.00 0.00 1.00 0.00
502	super_15:550492-550591 -	38.38	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAG-CAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC AAA----TG---------------------------GAATCAAGACT--CTGAGTTTCGTGGGGATGTTTGTATTATTTTATTAGAATTTGATTATCTGCCAATTTGTAGGTATGTATCATTGTTAATTATTA---- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........................................................................TTATATTATTAGAGTTTGA............................................. 19 1 1.00 0.00 1.00 0.00
343	super_1:11700305-11700356 -	22.28	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TGCACAGTTGGCAATTTAATCTATTAGAAGTCAACGGGATGGAGTTGAGTTG------------------------------------------------------------------------------------ Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head
326	super_1:8628679-8628680 -	1.49	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC AC-------------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head	None	None
294	super_230:4439-4439 +	0.75	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC ---------------------------------------------------------------------------------------------------------------------------------------C Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head	None	None

droYak2 - 20 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
899	chr3R:25978425-25978557 -	82.59	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACT-TTGTAGGTCGATGAAACAGCTCACAACTCTCAC TACACCA---ACAACATAAGATATATTCGGCATACAAACTTGAGCTTAATTGTGATTTAAGGATGTGAATT-TCAAGCAACGAAAAATCACAATGAAGCCAATTTTGTAGGCCGATGGAACACCTCACAACTCTCAC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .......................................TTGAGCTTAATTGTGATTTAAGG........................................................................... 23 2 0.50 0.00 0.00 0.50 0.00 0.00 .........................................................TAAGGATGTGAGTT-TCAAGCAA......................................................... 22 2 0.50 0.50 0.00 0.00 0.00 0.00 .......................................TTGAGCTTAATTGTGATTTAAG............................................................................ 22 2 0.50 0.00 0.00 0.50 0.00 0.00
147	chr3L:9312872-9312996 +	48.03	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGC-------------TTAATTGT-GATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TA--------ATAACAACAAATTAGATGTGTGTACAAA-AGAATTCAGATTGCAATGCTAAAAAATGGAATAATGTAAAAGTGATTATAACGA-ACAAAAATAATAATTTACATAATTTCTAGGTGAATGAAACA--------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
1187	chrX:13594265-13594411 -	47.09	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATG-GATGTGTATTTTTT-AGCAGTTAAAAATCACAATTT-AGCCACTTTGTAGGTCGATGAAACAGCTCA---------------CAACTCTCAC CACTCCTTGGACAACAGAAGATTTATCCAGCTTA-ACACTGCCAACAAGTT----TCTATAAAATATATATATTGTAAATAGTTGCTGCACATAAACCAGGCCAAATTG--AGTAAGTGAACCAAGCCAAGCACTCATTAAATAAAACTGTCAG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...............................................................ATATATAGATTGTAAATTGT....................................................................... 20 1 1.00 0.00 0.00 1.00 0.00 0.00
901	chr3R:25978456-25978583 -	44.99	T--------------------------ACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TATTTAAAAAAAAAAACAAAATATCGTACACCA---ACAACATAAGATATATTCGGCATACAAACTTGAGCTTAATTGTGATTTAAGGATGTGAATT-TCAAGCAACGAAAAATCACAATGAAGCCAATTTT------------------------------ Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .................................................................TTGAGCTTAATTGTGATTTAAGG.......................................................................... 23 2 0.50 0.00 0.00 0.50 0.00 0.00 ...................................................................................TAAGGATGTGAGTT-TCAAGCAA........................................................ 22 2 0.50 0.50 0.00 0.00 0.00 0.00 .................................................................TTGAGCTTAATTGTGATTTAAG........................................................................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00
328	chrX:9030202-9030335 +	44.97	TACACCATGAACAACATAA---GATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTT-TTTAGCAGTTAAAAATC---------ACAATTTAGCCACTTTGTAGGTCG-ATGAAACAGCTCACAACTCTCAC TA-ACTGTAAACGAAATCAACAATTATAACCAAACCAAAAACAAACACACAATCAATATAAACACACACACATGCATTCAACCAACAAATATCATTAAAATCTAAATTGTTCTACTCCAAAAACAAAACAAAACA--------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
954	chrX:3424397-3424544 -	40.99	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTT--TTAGCAGTTAAAAATCACA-----------------------ATTTAGCCACTTTGTAGGTC----GATGAAACA--GCTCACAACTCTCAC G-------------------ATTTAATTAAATGTCAAAATGAAAATTTTCGGCAATTTATGCATGGCAATTTTCTTTGGCTCTCGCACAGAGGAGAGTAGCTTTGTGAAGCAGGCCGACTGGGGGGTTTTGGGGGTTGGGTGTTGAGCTACCCCCGGAAAAACTCAC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ............................GAATGTCAAAGTGAAAATT........................................................................................................................ 19 1 4.00 0.00 0.00 4.00 0.00 0.00 .............................AATGTCAAAGTGAAAATTC....................................................................................................................... 19 1 2.00 0.00 0.00 2.00 0.00 0.00 .....................................................................................................................ACTGGGGGGTTTTGGGGA................................ 18 1 1.00 0.00 0.00 1.00 0.00 0.00 ................................................................................................................................TTGGGGGTTGGGGGAT....................... 16 1 1.00 0.00 0.00 0.00 1.00 0.00 ........................................................................................................................TGGGGGTTTTGGGGGGTGG............................ 19 1 1.00 0.00 1.00 0.00 0.00 0.00 .......................................................................................................TGGCAAGCAGGCCGACTG.............................................. 18 1 1.00 0.00 0.00 0.00 1.00 0.00 ..................................................................................................................................GGTGGTTGGGTGGTGAGC................... 18 1 1.00 0.00 0.00 1.00 0.00 0.00 ...............................................................................................................................TTTGGGGGTGGGGGGTT....................... 17 1 1.00 0.00 0.00 0.00 1.00 0.00 ....................................................................ATTTTCTTTGGCTCTCGCACAGAGGAGAGT..................................................................... 30 1 1.00 0.00 0.00 1.00 0.00 0.00 .............................AATGTCAAAGTGAAAATT........................................................................................................................ 18 1 1.00 0.00 0.00 1.00 0.00 0.00
1114	chrX:11029990-11030134 -	40.03	TACACCATGAACAACATAAGATTT------------------------ATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TCAACTT-GA--TGAGAGAGTTTCCTCAGAGATTTAAAACTCCCGGGCGTTAAGTAGAAAAATGAATACTCGGCTGCGAGTG---GAA---CAGCATTTTGCTGGTTGCATTTGC-----TGATTATCCGTA-GTCGCATAATTGGATCAAATATATCGC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .............................................................................................................................................................CTC 21 5 0.20 0.00 0.00 0.20 0.00 0.00 ..............................................................................................................................................................AC 18 16 0.06 0.00 0.00 0.00 0.00 0.06
774	chr2R:15641590-15641701 -	38.16	TACACCATGAAC--AACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC AAAGGCTTAAATTGAACTACAGTTTCTTTGGACCAATAAAATGACAATTGTTTCTGATTT----------------TTACAAATAAAATTTAAATTTCAATTACTTT----------GAATTACAATGCACTTTTTAT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ........AAATTGAACTACATAT.................................................................................................................. 16 7 0.14 0.00 0.00 0.00 0.14 0.00
878	chr3R:23228578-23228687 -	35.61	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC ATCACTTCTATTTCTACATATATTCTTCCATTAATGACCTAAAGCCTAATCGAAGTA------------------------TGTAATTTATTATGAAGCTAGCC--TAGTTTGCTGTAAGTTTCCTCAAATTAAAT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
421	chrX:11641172-11641258 +	34.96	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC T---------------------------------------------TGATTGTAATTTGTAATTGTTT-TTGTGTAGTAACTC--GTTTGCCATTTGTTTTATGTGTATGTTTGTGT-ACAGCCTGAAACAGCCAT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
187	chr3R:24937903-24937980 +	33.16	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC A----------------------------------------------------TATGTATGTATGTGCAGCCATCGTCAT-----CATCATAAATCAACATCA-ATGATATCGACGTAATCACTCAAAATGCACAC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
718	chr2L:4773586-4773665 -	30.17	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTT--TTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAAC---AGCTCACAACTCTCAC T---------------------------------------------TGTTTGCCATTTAAATAAGCATACTTTCCGCAGCAGCACAGAGGCACA---GAGCCACCGAGAAGGGCGGAAATAAATATG-------------C Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................................................AGA---GAGCCACCGAGGAGGG............................ 19 1 2.00 0.00 1.00 0.00 1.00 0.00 ...........................................................................................AGA---GAGCCACCGAGGAGGGC........................... 20 1 1.00 0.00 0.00 0.00 1.00 0.00 .................................................TTGCGATTTAAATAAGCAGA........................................................................ 20 1 1.00 0.00 0.00 1.00 0.00 0.00 ...................................................................................................GCCACCGAGGAGGGCCG......................... 17 1 1.00 0.00 0.00 0.00 1.00 0.00 .............................................................................................A---GAGCCACCGAGGAGGGT........................... 18 1 1.00 0.00 0.00 0.00 1.00 0.00 ..........................................................................................CAGA---GAGCCACCGAGGAGGG............................ 20 1 1.00 0.00 0.00 0.00 1.00 0.00
74	chr2R:16142620-16142699 +	27.86	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTT-----AGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC A------------------------------------AATGAGCGTTACTCTCAATTTATTTTCGCTTGTATTGTATGACAGCAGTTCAGAATGATACATT----------TGTTATGGTGAAACA--------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
51	chr2R:7765425-7765488 +	25.66	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTC--AC TTTTCGTGGCTCAACATAAACTTGGTTACATTTCCAGCCCC--------------------------------------------------------------------------CAAAACGCCACCAATTCCCAGAC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
496	chrX:14033724-14033769 +	23.88	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTC-ACAACTCTCAC -------------------------------------------------------------------------------------------AATTTGGCCAAATCATCGGCCGATGAAGCTGCCCAACAATGCTGAC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
428	chrX:11836338-11836362 +	11.19	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC ---------------------------------------------------------------------------------------------------------------CAATGGAAAGGCTAACGAGGCGCGC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head		None
318	chrX:7445432-7445451 +	10.45	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC AAAAACACGAACAAAAAAAG-------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head		None
1127	chrX:11518854-11518873 -	10.45	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC --------------------------------------------------------------------------------------------------------------------AAACCGCCCAAAGCTGCCAC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .....................................................................................................................AACCGACCAAAGCTGCCAC 20 6 0.17 0.00 0.17 0.00 0.00 0.00		None
170	chr3R:19319883-19319900 +	8.96	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TAAATTACGAACAGGATA---------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head		None
12	chr2L:2600022-2600031 +	5.22	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC ------------------------------------------------------------------------------------------------------------------------------CCATTCTCGC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head	None	None

droEre2 - 44 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2876	scaffold_4820:7539900-7540034 -	85.39	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC CACACCATGAACAACATAAGATATATTCGGCCTACAAACATAAGCATAATTGTGATTTAAGGATGTATATT-TCAAGTAGTAATACATCACAATTTAGCCAATTTGTAGGCCGATGAAAAACCTCACAACTCTCAC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
2606	scaffold_4784:14801548-14801674 -	50.41	TACACCATGAACAACATAAG-AT-TTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCAC---AATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TAGGCAATTAACAACATAGATATTTGTTTCAATATACAGAATAT-----CATTTTAATTTTTAAATTTTCCCGTTTAAACG---AAATTTCACTTAAACTTAATGACTT------TCAGTGTTAAAATCAACATCGTTTAT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .....AATTAACAAAACAGATAT...................................................................................................................... 18 1 1.00 1.00 0.00 0.00 0.00
1285	scaffold_4793:30228-30352 +	49.17	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGAT-TTATGGATGTGTATTTTTTAGCAGTTAAAAATCA-----CAATTTAG--CCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC A-----------------AGATCTCTCTATTTCACTCACTAA--TATAATTATGACAATATAATAGTTTATTATTTAATTACTTACAGCTCGAGATTAATTTAGTAGCACTTTGTATACGAATAAACATAAAAATATATATCCC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .......................................................................TATTTAATTATTTACAGCTCGA................................................... 22 8 0.13 0.00 0.00 0.00 0.13 ...................................................................................TACAGCTCGAGATTAATTTAGT....................................... 22 8 0.13 0.00 0.00 0.00 0.13
75	scaffold_4690:899115-899245 +	47.22	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTC----------------------------------------------GATGAAACAGCTCACAACTCTCAC TACGCCACCAGTTATATGCCAGCT--------TTTTTTC-------------------------------------------TGCAGTAACATTTTTGCTGCTCTGTCAATTTGACCATTTGGTAAAATGACTATGGGAATTTTAATCGATTGGTAACTTTGGTTTAGCTGAAAATTTCAAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ............................................................................................................................................................TCTTTGGTTTAGCTGTAA........ 18 1 1.00 0.00 0.00 0.00 1.00 ........................................................................................................TTTCAATTTGACAATTTGGT.......................................................... 20 1 1.00 1.00 0.00 0.00 0.00 .........................................................................................................................................GACTTTTAATCGAATGGT........................... 18 1 1.00 0.00 0.00 0.00 1.00 ..........................................................................................................TCAATTTGAAAATTTGGT.......................................................... 18 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................................................................GGTAATTTTGGTTTAACT............ 18 1 1.00 1.00 0.00 0.00 0.00
1483	scaffold_4845:7154585-7154724 +	45.89	TACACCATG----------AACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TAAATGCCTATGGGTGAGTAAGGTCAAAAAATAGTTTCGCACTGCAGCAAAAAGGCACGTTCTAAATTTTTGTACATTATTTTTT------TTAAATTTTTGACTTAACGATTTTGTAGAAATCCAAAAAAATTTAGAAATGTCCT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................................................................................................ATGTTGTAGAAATTCAAAAAA............... 21 9 0.11 0.00 0.00 0.00 0.11 .....................................................................TTGTACATTATTTTCT------GT..................................................... 18 3 0.33 0.00 0.00 0.00 0.33
602	scaffold_4770:7990983-7991117 +	45.7	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTT----------------TTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC --------GAATAATACAATATCTGTATCATGTTTAAAATCACATTTAAGCGCAAGAAATCC-----TATTCGGCATATTAGTTTGATAGCTATAGTCAATAAGTAAATTTCTACAAATTATTACTTCAATATTGTTTGTTAAAATTT---- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .............................................................................................................................TTCAATATAGTCTGTTAAAA....... 20 1 1.00 0.00 0.00 0.00 1.00
1507	scaffold_4845:7337091-7337223 +	45.66	TACACCATGAACAACATA--AGATTTAT----TCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCG---ATGAAACAGCTCACAACTCTCAC----- AAAAGGATGAAAAACAGGACAGATTCATACGTTTGATTCATACGTTGCC-----ATTGTGCGTTTTCAATACGC-----------GTTTCAA-ATACGTTTCGGGCATTTTATAGGTTTTATTTAAGACAATTTTTACTACTCACTTTAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .......................................................................TGC-----------GTTTCAA-ATACTTTTCGGGC............................................ 23 4 0.75 0.75 0.00 0.00 0.00 ...........................................................................................................TTTTATAGTTTGTATTTAA........................ 19 4 0.25 0.00 0.00 0.00 0.25 .......................................................................TGC-----------GTTTCAA-ATACGTTTCGGGC............................................ 23 4 0.25 0.25 0.00 0.00 0.00 ................................TTGATTCATACGTTGAC-----ATTGTGC......................................................................................... 24 4 0.25 0.00 0.00 0.00 0.25 ................................TTGATTCATACGTTGCC-----ATTGTGC......................................................................................... 24 4 0.25 0.25 0.00 0.00 0.00 ..................................................................................................TTTCGGGCATTTTATAGGTTTCC............................. 23 1 1.00 0.00 0.00 0.00 1.00 ................................TTGATTCATACGTTGCC-----ATTGTGCC........................................................................................ 25 4 0.25 0.25 0.00 0.00 0.00
3265	scaffold_4929:15062921-15063050 -	44.67	TACACCATGAACAACATAAGATTTATTCGGTC-----TACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TTAATTACTTACAGCTTAAGATTAATTTAGTAGCACATACATA--TATCCCTTTCAGTGTAGGGTAATCAATTTCTTTACAATAATTTTATATTGTTTTTTAAATATTTTGTAT---GAATAAATATTTTAAAAT------ Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..................................................................................................TGTAAATxTTTTGTAT---GAAT.................... 19 1 1.00 0.00 0.00 0.00 1.00 ..................................................................................................TGTAAATxTTTTGTAT---GAA..................... 18 1 1.00 0.00 0.00 0.00 1.00 ..........................................................................................................TTTTGTAT---GAATTTATATT............. 19 3 0.33 0.33 0.00 0.00 0.00
1151	scaffold_4784:17757577-17757725 +	44.67	TACAC---CATGAACAACATAAGATTTATTCGGTCTAC----AAACTGAAGCTTAATTGTG---ATTTATGGATGTGTATTTTTTAGCAGTTA------------AAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TACACGTGTATGCTCACCATATGATTCCGCCAGTGTGTACACACCCTATGATGGCATTGTGTTCATTCACCTGCGCGCGTTTTTTAAAAGCGTATTAAATGATTAGAGACTA---------CATTTAATAGATATACAATTCATTTTTGTATTATCCC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...............................................................................................................................ATAGAGATACAATTxATTTTT.......... 20 1 89.00 25.00 4.00 0.00 60.00 ................................................................................................................................TAGAGATACAATTxATTTTT.......... 19 1 4.00 1.00 0.00 0.00 3.00 ...............................................................................................................................ATAGATATACAATTATTTT............ 19 2 0.50 0.00 0.00 0.00 0.50 ...............................................................................................................................ATAGACATACAATTxATTTTT.......... 20 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................................................................ATAGATATACAATTATTT............. 18 2 0.50 0.00 0.00 0.00 0.50 ...............................................................................................................................ATAGAGATACAAxTCATTTTT.......... 20 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................................................................ATAGATATACAATTATTTTT........... 20 2 0.50 0.00 0.00 0.00 0.50
1611	scaffold_4845:13934273-13934393 +	44.43	TACACCATG--------AACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTC-----GATGAAACAGCTCACAACTCTCAC TAAGCTTTGTGTAGTTCAACAGAACAAAAACTTTTTGGAAAATAGCTTGTATCTGAA----------------------------AAGGTCAAGAAATCAATAGAACCACCTTACTTGTTTTCTATATGAATCACTTTTAATGGCTTCC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
3161	scaffold_4845:13964437-13964559 -	43.52	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC -ACATACTGCAAAGGGGAAACGTTACTAGTTCCATCGACTACAACTTAATCGGAATCTTTATAAGCACCTTGATTAGTGCCTGGTACTCCTCCTTTAGCC------------GCTGCACCCACACATCCTTTTCAC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
3173	scaffold_4845:17033874-17034018 -	42.84	TACACCATGAACAACATAAGATTTAT---TCGGTCTACAAACTGAAGCTTAATTGTGATTTATG-GATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGA-----AACAGCTCACAACTCTCAC TATAAAGTAGTTATAATTCGATTTATATATGAGTTCATACATACAGGAACCATCGTAATCAAAACGTAGTGCTGTTTCTTATTATTTCATGCAAATATCAAGCTTTTCTGCGGATTAAAATGGGATCTTAAATGAAAATTGTTAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
2597	scaffold_4784:13963956-13964087 -	41.21	TACACC-----ATGAACAACATAAGATTTA--------TTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TGCGTTTCTTGATGATCGATGTTAAATGTGCTTCCGAGCTCCCTCTGTTTCCAAATACCAAGTTGTTA--AATTGTTTTACTTTTTCTATCGTTACCAAGACACACAC---------------ACACACAAACACAACGCAATACACGC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .CCTTTTCTTGATGATCGA.................................................................................................................................. 18 1 1.00 0.00 0.00 0.00 1.00 ....................................................................................................ACACACAC---------------ACATACAAAGA............... 19 5 0.20 0.20 0.00 0.00 0.00 ..................................................................................................AGACATACAC---------------ACACACAC.................. 18 5 0.20 0.20 0.00 0.00 0.00 ......................................................................................................ACACAC---------------ACACACATACACAT............ 20 6 0.17 0.17 0.00 0.00 0.00
637	scaffold_4770:10442487-10442584 +	40.3	TACACCATGAACAACATAAG-ATTTATTCGGTC-----TACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTA--GCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TAA-TTATGA-CAAAATAATAGTTTATTATTTAATTACTTATAACTCGAGATTA--------------------------------------------ATTTAATAGCACTTTGTATACGAATAAACATAAAAATATATATCCC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ........GA-CAAAATAATAxTTTCTT.................................................................................................................... 18 2 0.50 0.50 0.00 0.00 0.00
1677	scaffold_4929:7711910-7712031 +	40.3	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTT--------AAAAATCACAATTTAGCCACTTTGTAGGTCGATGAA---------------ACAGCTCACAACTCTCAC AATA-------------------------------------AAAATAAATTTCTAAATTTGAATGCAGTTTTTTAGAGAATTGCGCCAGAAACATTTAGAGGTATGCCACTTCAAAATCCGATTAAGATAAGTTGAGTTATGCAGTTTAGAACTTCGGA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................................................................................................................GATAAGTTGAGTTATGGA............... 18 28 0.36 0.07 0.00 0.00 0.29 ........................................................................................................................GATTAAGATAAGTTGAGT..................... 18 29 0.10 0.03 0.00 0.00 0.07 ...................................................................GTTTTTTAGAGAATTGCTCCAGA..................................................................... 23 29 0.10 0.00 0.00 0.00 0.10 ........................................................................................................................GATTAAGATAAGTTGAGTTATGGA............... 24 25 0.12 0.00 0.00 0.00 0.12
321	scaffold_4690:11778366-11778480 +	40.09	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC GGCAGCA-----AACATATATTTTATTCTCT----ATATCGTACTATATTGGTTTTAATTA-------GTTGCTTATTAGCTA---GTGATAACTTTGGTGTCTTGTGTTGT--AACAAAAGTACAAAATGTATAT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...............................................ATTGTTTTTAGTTA-------GTTGC............................................................... 19 1 1.00 0.00 0.00 0.00 1.00
463	scaffold_4770:3177592-3177708 +	38.81	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGT--------------------CGATGAAACAGCTCACAACTCT----CAC -------------------------------------------GTTCAACTGTATGTCAGTGATGCCAATATTTTTCTGAAAAAAAATGAAAACTTAGAAAAACTTAAAAAGGGCAGATTTCCGGATAAAGCAGTAAAAAACAAGACAGATCTGTCCAGA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ............................................................................ATGAAAGAAAATGAAAACT................................................................. 19 1 2.00 1.00 0.00 0.00 1.00 .............................................................................................................AAGAGCAGATTTCAGGAT................................. 18 1 1.00 0.00 0.00 0.00 1.00 ................................................................................................................................AAGCAGTAAAAAGCAGGACAGATCTG...... 26 2 0.50 0.00 0.00 0.00 0.50
763	scaffold_4784:2212515-2212653 +	38.69	TACACCATGAACAACATAAGATTTATTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTT---TTAGCAGTTAAA-----------AATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCAC----AACTCTCAC TAAGCCGAAAATTTCAAAAAA--------GGTTGAAAAAACAGGACAGATTTTGATTCATACGTTTGATTCATACGTTGCCATTGTGCCAGTGCGTTTCAAATACGTTTCGGGAATTTTAAAGGCTT-------TATTTAAGACCATTTTTACT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head AAAGCCGAAAATTTTAAA........................................................................................................................................ 18 1 8.00 0.00 0.00 0.00 8.00 ...........................................................................................TGCGTTTCAAATACTTTTCGGGC........................................ 23 4 0.75 0.75 0.00 0.00 0.00 ...........................................................................................TGCGTTTCAAATACGTTTCGGGC........................................ 23 4 0.25 0.25 0.00 0.00 0.00 ................................................................TTGATTCATACGTTGCCATTGTGCCA................................................................ 26 3 0.33 0.00 0.00 0.00 0.33 ................................................CTTTTGCTTCATACGTTT........................................................................................ 18 2 0.50 0.50 0.00 0.00 0.00 ................................................................TTGATTCATACGTTGCCATTGTGCC................................................................. 25 4 0.25 0.25 0.00 0.00 0.00 TAAGCCGAAAATTTTCAA........................................................................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 .AAGCCGAAAATTTTAAAG....................................................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 AAAGCCGAAAATTTCCAA........................................................................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 ................................................................TTGATTCATACGTTGACATTGTGC.................................................................. 24 4 0.25 0.00 0.00 0.00 0.25 ................................................................TTGATTCATACGTTGCCATTGTGC.................................................................. 24 4 0.25 0.25 0.00 0.00 0.00 ................................................................TTGATTCATACGTTGCCATTGTGCCAA............................................................... 27 3 0.33 0.00 0.00 0.00 0.33
2789	scaffold_4820:167747-167907 -	37.16	TACACCATGAACAACATAAGATTTATTCG----------------------------GTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTAG-C-AGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC ACAAAAAAAAAAAACGGAAAAGATAGGTTGAAAATTTAAAAAAAGGATGAAAAAACAGGACAGATTTTGATTCTTACGTTTGATTCATACGTTGGCATTGTGCCAATGCGTT-TCAAATACGTTTCAGGCATTTTATAGGCTTT----ATTTAAGACAATTTTTAC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..........................................................................................................TGCGTT-TCAAATACTTTTCGGGC.................................... 23 4 0.75 0.75 0.00 0.00 0.00 ..................................TTTAAAAAAAGGCTGATA.................................................................................................................. 18 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................TTGATTCATACGTTGCCATTGTGC............................................................... 24 4 0.25 0.25 0.00 0.00 0.00 .....AAAAAAAAAGGAAAAAGA............................................................................................................................................... 18 6 0.17 0.00 0.00 0.00 0.17 ...............................................................................TTGATTCATACGTTGCCATTGTGCC.............................................................. 25 4 0.25 0.25 0.00 0.00 0.00 .......................................ATAAAGGAxGAAAAAACAG............................................................................................................ 18 2 0.50 0.50 0.00 0.00 0.00 ...............................................................................TTGATTCATACGTTGCCATTGTGCCAA............................................................ 27 3 0.33 0.00 0.00 0.00 0.33 ...............................................................................TTGATTCATACGTTGACATTGTGC............................................................... 24 4 0.25 0.00 0.00 0.00 0.25 ..........................................................................................................TGCGTT-TCAAATACGTTTCGGGC.................................... 23 4 0.25 0.25 0.00 0.00 0.00 ...............................................................................TTGATTCATACGTTGCCATTGTGCCA............................................................. 26 3 0.33 0.00 0.00 0.00 0.33
2372	scaffold_4770:11695462-11695626 -	36.57	TAC--------ACCATGAACAACATAAGATTTATTC--GGTCTACAAACTGA--AGCTT------------AATTGTGATTTATGGATGTGTAT---TTTT--------TAGCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCGATGAAACAGCTCACAACTCTCAC TACTAATTATAATTATAAAAAATATTATACTAATTAAAGATTTCCGGATAGAAAAACTTAAAAAAGAACAGATTTACGGGTTAGGGCTGTTTGACATTTTTTCCGGATGAAGCAGTAAAA-AACAGGACAGATCTGTCCGGAAAAAGGC-----TAAATTGGCATTTCTGC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ....................AATATTATxxTAATTAAAGA................................................................................................................................... 18 2 2.00 0.00 0.00 0.00 2.00 .................................................................................TAGGGCTGTTTAACATTC........................................................................ 18 1 2.00 0.00 0.00 0.00 2.00 ..........................................................TAAAAAAGGACAGATTTCCGGGT.......................................................................................... 23 1 1.00 0.00 0.00 0.00 1.00 ..................................................GAAAAACTTAAAAAAGGACAGATT................................................................................................. 24 1 1.00 1.00 0.00 0.00 0.00 .............................................................................................................AAGCAGTAAAA-AGCAGGACAGATCTG................................... 26 2 0.50 0.00 0.00 0.00 0.50 ...AAAATATAATTATAAAAAA..................................................................................................................................................... 19 8 0.13 0.13 0.00 0.00 0.00
1213	scaffold_4784:19380898-19381057 +	35.61	TACACCA-----TGAACAACATAAGATTTA--------TTCGGTCTACAAACTGAAGCTTAATTGTGATTTATGGATGTGTATTTTTTA----------------GCAGTTAAAAATCACAATTTAGCCACTTTGTAGGTCG-ATG--AAACAGCTCACA-ACTCTCAC AGAAAAAAAAAACGGAAAAAATAGGCTGAAAATTTCAAAAAAGGATGAAAAAACAGGACAGATTTTGATTCATACGTTTGATTCATACGTTGCCATTATGCCAATGCGTTTC--AAATACGTTTCGGGCATTTTATAGTCTTTATTTAAGA-------CAATTTTTTCT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ........................................................................................................TGCGTTTC--AAATACTTTTCGGGC........................................ 23 4 0.75 0.75 0.00 0.00 0.00 ..AAAAAAAAGACCGAAAAAA.................................................................................................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 ..................................................................................................................................TTTTATAGTTTGTATTTAA.................... 19 4 0.25 0.00 0.00 0.00 0.25 .............................................................................TTGATTCATACGTTGCCATTGTGCCAA................................................................. 27 3 0.33 0.00 0.00 0.00 0.33 .............................................................................TTGATTCATACGTTGCCATTGTGCCA.................................................................. 26 3 0.33 0.00 0.00 0.00 0.33 .............................................................................TTGATTCATACGTTGCCATTGTGC.................................................................... 24 4 0.25 0.25 0.00 0.00 0.00 .............................................................................TTGATTCATACGTTGACATTGTGC.................................................................... 24 4 0.25 0.00 0.00 0.00 0.25 ........................................................................................................TGCGTTTC--AAATACGTTTCGGGC........................................ 23 4 0.25 0.25 0.00 0.00 0.00 ...AAAAAAAAAGGGAGAAAA.................................................................................................................................................... 18 5 0.20 0.00 0.00 0.00 0.20 .............................................................................TTGATTCATACGTTGCCATTGTGCC................................................................... 25 4 0.25 0.25 0.00 0.00 0.00 .....................................ATAAAGGAxGAAAAAACAG................................................................................................................. 18 2 0.50 0.50 0.00 0.00 0.00 .............................................................CTTTTGCTTCATACGTTT.......................................................................................... 18 2 0.50 0.50 0.00 0.00 0.00