Possible Orthologs for dme-mir-999

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
83	chr3R:17429586-17429720 -	97.79	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ............................................................................TGTTAACTGTAAGACTGTGTCT..................................... 22 1 562142.00 1276.00 510817.00 19930.00 30119.00 ............................................................................TGTTAACTGTAAGACTGTGTCC..................................... 22 1 68992.00 3.00 63787.00 1912.00 3290.00 ............................................................................TGTTAACTGTGAGACTGTGTCT..................................... 22 1 30749.00 10.00 29571.00 1045.00 123.00 ............................................................................TGTTAACTGTAAGACTGTGTCG..................................... 22 1 12607.00 1.00 10906.00 665.00 1035.00 ............................................................................TGTTAACTGTAAGACTGTGTC...................................... 21 1 9924.00 9.00 9156.00 361.00 398.00 ............................................................................TGTTAACTGTAATACTGTGTCT..................................... 22 1 7244.00 0.00 6635.00 196.00 413.00 ............................................................................TTTTAACTGTAAGACTGTGTCT..................................... 22 1 6069.00 0.00 5498.00 135.00 436.00 ..............................................................................TTAACTGTAAGACTGTGTCT..................................... 20 1 4489.00 0.00 4126.00 80.00 283.00 ............................................................................TGTTAACTGTGAGACTGTGTCC..................................... 22 1 3911.00 0.00 3797.00 101.00 13.00 .............................................................................TTTAACTGTAAGACTGTGTCT..................................... 21 1 3514.00 0.00 3228.00 76.00 210.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCT..................................... 23 1 3347.00 15.00 2957.00 122.00 253.00 ............................................................................TCTTAACTGTAAGACTGTGTCT..................................... 22 1 3206.00 0.00 2903.00 69.00 234.00 ............................................................................TGTTAACTGTAACACTGTGTCT..................................... 22 1 3000.00 0.00 2745.00 74.00 181.00 ............................................................................TGTTAACTGTAGGACTGTGTCT..................................... 22 1 2071.00 1.00 1965.00 82.00 23.00 ............................................................................TGTTAACTGTAAGACTTTGTCT..................................... 22 1 1731.00 1.00 1569.00 30.00 131.00 ............................................................................TGTTAACTTTAAGACTGTGTCT..................................... 22 1 1249.00 2.00 1120.00 40.00 87.00 ............................................................................TGTTAACTGTAAGACTxTGTCT..................................... 21 2 505.00 0.00 452.50 15.00 37.50 ............................................................................TGTTAACTGTAATACTGTGTCC..................................... 22 1 1004.00 0.00 950.00 10.00 44.00 ............................................................................TGTTAACTGTAAGACTGTCT....................................... 20 1 966.00 0.00 858.00 33.00 75.00 ............................................................................TGTTGACTGTAAGACTGTGTCT..................................... 22 1 899.00 0.00 869.00 17.00 13.00 ............................................................................TGTTAACTGTAAGACTGTGCCT..................................... 22 1 759.00 0.00 702.00 27.00 30.00 ............................................................................TTTTAACTGTAAGACTGTGTCC..................................... 22 1 744.00 0.00 685.00 18.00 41.00 ............................................................................TGTTAACTGTGAGACTGTGTCG..................................... 22 1 707.00 0.00 676.00 25.00 6.00 .............................................................................GTTAACTGTAAGACTGTGTCT..................................... 21 1 701.00 8.00 538.00 75.00 80.00 ............................................................................TGTTAACTGTAAGGCTGTGTCT..................................... 22 1 688.00 2.00 623.00 27.00 36.00 ............................................................................TGTTAACTGTAAGACTGGGTCT..................................... 22 1 642.00 1.00 589.00 24.00 28.00 ............................................................................TGTTAACTGTAAGACTGTGTCTT.................................... 23 1 621.00 21.00 531.00 55.00 14.00 ............................................................................TGTTAACTGTGGGACTGTGTCT..................................... 22 1 565.00 0.00 541.00 19.00 5.00 ..............................................................................TTAACTGTAAGACTGTGTCC..................................... 20 1 554.00 0.00 503.00 14.00 37.00 ............................................................................TGTTAACTGTxATACTGTGTCT..................................... 21 1 501.00 0.00 460.00 16.00 25.00 ............................................................................TGTTAACTCTAAGACTGTGTCT..................................... 22 1 494.00 0.00 435.00 15.00 44.00 ............................................................................TGTTAACTGTAAGACTGCGTCT..................................... 22 1 467.00 7.00 429.00 10.00 21.00 .............................................................................TTTAACTGTAAGACTGTGTCC..................................... 21 1 446.00 0.00 413.00 12.00 21.00 ............................................................................TGTTAACTGTAAGACTGTGTCTA.................................... 23 1 437.00 43.00 294.00 43.00 57.00 ............................................................................TGTTAACTGTAACACTGTGTCC..................................... 22 1 416.00 0.00 383.00 8.00 25.00 ............................................................................TGTTAACTGTxACACTGTGTCT..................................... 21 1 411.00 0.00 374.00 10.00 27.00 ............................................................................TGTTAACTGTAAGACTCTGTCT..................................... 22 1 401.00 0.00 367.00 5.00 29.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCC..................................... 23 1 383.00 0.00 354.00 5.00 24.00 ............................................................................TCTTAACTGTAAGACTGTGTCC..................................... 22 1 379.00 0.00 343.00 11.00 25.00 ............................................................................TGTTAACTGCAAGACTGTGTCT..................................... 22 1 371.00 2.00 339.00 15.00 15.00 ...........................................................................CTGTTAACTGTAAGACTGTGTCT..................................... 23 1 371.00 0.00 327.00 18.00 26.00 ............................................................................TGTTAACTGTAAGACTGTGT....................................... 20 1 342.00 2.00 331.00 9.00 0.00 ............................................................................TGTTAACTGTAAGACTGTTTCT..................................... 22 1 335.00 1.00 304.00 16.00 14.00 ............................................................................TGCTAACTGTAAGACTGTGTCT..................................... 22 1 332.00 3.00 303.00 13.00 13.00 ............................................................................TGTTAACCGTAAGACTGTGTCT..................................... 22 1 325.00 0.00 295.00 10.00 20.00 ............................................................................TGTTAACTGTAAxACTGTGTCT..................................... 21 1 321.00 0.00 295.00 9.00 17.00 ............................................................................TGTTAACTGTGAGACTGTGTC...................................... 21 1 310.00 0.00 299.00 11.00 0.00 ............................................................................TGTTGACTGTGAGACTGTGTCT..................................... 22 1 309.00 0.00 300.00 9.00 0.00 ............................................................................TGTTAGCTGTAAGACTGTGTCT..................................... 22 1 309.00 2.00 280.00 16.00 11.00 ...............................................................................TAACTGTAAGACTGTGTCT..................................... 19 1 307.00 0.00 290.00 3.00 14.00 ............................................................................TGTTAACTGTAAGACCGTGTCT..................................... 22 1 292.00 2.00 263.00 7.00 20.00 ............................................................................TGTTAACTGTAAGACTGTCTCT..................................... 22 1 283.00 0.00 254.00 6.00 23.00 ............................................................................CGTTAACTGTAAGACTGTGTCT..................................... 22 1 276.00 2.00 248.00 6.00 20.00 ............................................................................TGTTAACTGTAxxACTGTGTCT..................................... 20 1 272.00 0.00 248.00 7.00 17.00 ............................................................................TGTTAACTGTAGGACTGTGTCC..................................... 22 1 244.00 0.00 238.00 2.00 4.00 ................................................................................AACTGTAAGACTGTGTCT..................................... 18 1 242.00 0.00 231.00 6.00 5.00 ............................................................................TGTTAACTGTAAAACTGTGTCT..................................... 22 1 208.00 1.00 182.00 7.00 18.00 ............................................................................TGTTAACTGTxAGACTGTGTCT..................................... 21 1 203.00 0.00 190.00 7.00 6.00 ............................................................................TGTTAACTGTAATACTGTGTCG..................................... 22 1 195.00 0.00 172.00 7.00 16.00 ............................................................................TGTTAACTGTAAGACTTTGTCC..................................... 22 1 175.00 0.00 153.00 7.00 15.00 ............................................................................TTTTAACTGTGAGACTGTGTCT..................................... 22 1 170.00 0.00 164.00 3.00 3.00 ............................................................................TGTTAACTGTAAGACTGAGTCT..................................... 22 1 168.00 0.00 149.00 4.00 15.00 ............................................................................TATTAACTGTAAGACTGTGTCT..................................... 22 1 163.00 1.00 155.00 5.00 2.00 ............................................................................TGTTAACTGTAAGATTGTGTCT..................................... 22 1 162.00 1.00 150.00 6.00 5.00 ............................................................................TGTTAACTGGAAGACTGTGTCT..................................... 22 1 161.00 2.00 136.00 10.00 13.00 ............................................................................TGTTAACTGTAAGACTGTGGCT..................................... 22 1 161.00 5.00 130.00 13.00 13.00 ............................................................................TGTTAACTGTAAGACTATGTCT..................................... 22 1 151.00 0.00 139.00 1.00 11.00 ............................................................................TTTTAACTGTAAGACTGTGTCG..................................... 22 1 145.00 0.00 127.00 5.00 13.00 ............................................................................TGTTAACTGTAAGACTGTATCT..................................... 22 1 145.00 0.00 129.00 3.00 13.00 ............................................................................TGTTAACTATAAGACTGTGTCT..................................... 22 1 144.00 2.00 128.00 6.00 8.00 ............................................................................TGTTAACTTTAAGACTGTGTCC..................................... 22 1 142.00 0.00 128.00 8.00 6.00 ......................................ACATAGTCGTACGGTGAATGTT........................................................................... 22 1 133.00 5.00 94.00 6.00 28.00 ............................................................................TGTTAACTGTAAGAATGTGTCT..................................... 22 1 128.00 3.00 114.00 7.00 4.00 ............................................................................TGTCAACTGTAAGACTGTGTCT..................................... 22 1 125.00 3.00 117.00 2.00 3.00 ............................................................................TGTTAACTGTAAGACTGTCC....................................... 20 1 122.00 0.00 115.00 0.00 7.00 ............................................................................TGTTGACTGTAAGACTGTGTCC..................................... 22 1 116.00 0.00 113.00 2.00 1.00 ............................................................................TGTTAACTxTAAGACTGTGTCT..................................... 21 1 111.00 0.00 94.00 6.00 11.00 ............................................................................TGTTAACTGTAAGGCTGTGTCC..................................... 22 1 107.00 0.00 99.00 1.00 7.00 ............................................................................TGTTAACTGTAAGACTGTGAC...................................... 21 1 107.00 0.00 103.00 2.00 2.00 ..............................................................................TTAACTGTGAGACTGTGTCT..................................... 20 1 107.00 0.00 104.00 1.00 2.00 ............................................................................TCTTAACTGTGAGACTGTGTCT..................................... 22 1 103.00 0.00 98.00 5.00 0.00 .............................................................................GTTAACTGTAAGACTGTGTCC..................................... 21 1 102.00 0.00 83.00 11.00 8.00 ............................................................................TGTTAACTGTAAGACTGTGTCA..................................... 22 1 102.00 2.00 83.00 6.00 11.00 ............................................................................TGTTAACTGTGAGACTTTGTCT..................................... 22 1 101.00 0.00 98.00 2.00 1.00 ............................................................................AGTTAACTGTAAGACTGTGTCT..................................... 22 1 100.00 1.00 80.00 10.00 9.00 .............................................................................TTTAACTGTGAGACTGTGTCT..................................... 21 1 98.00 0.00 97.00 1.00 0.00 ............................................................................TGTTAACTGTAAGCCTGTGTCT..................................... 22 1 96.00 1.00 89.00 4.00 2.00 ..............................................................................TTAACTGTAAGACTGTGTCG..................................... 20 1 93.00 0.00 85.00 4.00 4.00 ............................................................................TGTTAACTGTAAGACTGT......................................... 18 1 93.00 0.00 81.00 8.00 4.00 .............................................................................TTTAACTGTAAGACTGTGTCG..................................... 21 1 92.00 0.00 80.00 2.00 10.00 ............................................................................TGTTAATTGTAAGACTGTGTCT..................................... 22 1 91.00 1.00 82.00 4.00 4.00 ............................................................................TGTAAACTGTAAGACTGTGTCT..................................... 22 1 91.00 1.00 84.00 1.00 5.00 ............................................................................TGTTAACTGTAACACTGTGTCG..................................... 22 1 88.00 0.00 75.00 3.00 10.00 ............................................................................TGTTAACxxTAAGACTGTGTCT..................................... 20 1 88.00 0.00 80.00 1.00 7.00 ............................................................................TGTTAACTGTAAGACTGTGTTT..................................... 22 1 82.00 1.00 70.00 5.00 6.00 ............................................................................GGTTAACTGTAAGACTGTGTCT..................................... 22 1 79.00 0.00 69.00 2.00 8.00 ............................................................................TGTTAACTGTGATACTGTGTCT..................................... 22 1 77.00 0.00 72.00 3.00 2.00 .............................................................................TGTAACTGTAAGACTGTGTCT..................................... 21 1 75.00 0.00 73.00 1.00 1.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCG..................................... 23 1 71.00 0.00 59.00 3.00 9.00 ............................................................................TGTTAACTGTAAGACTGGGTCC..................................... 22 1 69.00 0.00 63.00 3.00 3.00

droSec1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
103	super_0:17996302-17996436 -	98.52	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ............................................................................TGTTAACTGTAAGACTGTGTCT..................................... 22 1 92271.00 12625.00 9147.00 70499.00 ............................................................................TGTTAACTGTGAGACTGTGTCT..................................... 22 1 12482.00 1057.00 129.00 11296.00 ............................................................................TGTTAACTGTAGGACTGTGTCT..................................... 22 1 1639.00 180.00 23.00 1436.00 ............................................................................TGTTAACTGTAAGACTGTGTC...................................... 21 1 1455.00 183.00 86.00 1186.00 ............................................................................TGTTAACTGTAAGACTGTGTCTT.................................... 23 1 1397.00 259.00 103.00 1035.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCT..................................... 23 1 1271.00 164.00 115.00 992.00 ............................................................................TGTTAACTGTAAGACTGTGT....................................... 20 1 983.00 117.00 26.00 840.00 ............................................................................TGTTAACTGTGGGACTGTGTCT..................................... 22 1 830.00 60.00 7.00 763.00 ............................................................................TGTTAACTGTAAGACTGTGTCTA.................................... 23 1 661.00 170.00 42.00 449.00 .............................................................................GTTAACTGTAAGACTGTGTCT..................................... 21 1 520.00 176.00 51.00 293.00 ............................................................................TGTTAACTGTAAGACTGTGTCC..................................... 22 1 345.00 82.00 36.00 227.00 ............................................................................TGTTGACTGTAAGACTGTGTCT..................................... 22 1 251.00 27.00 10.00 214.00 ............................................................................TGTTAACTGTAAGACTGTCT....................................... 20 1 222.00 20.00 32.00 170.00 ............................................................................TGTTAACTGTAAGACTGTATCT..................................... 22 1 176.00 76.00 4.00 96.00 ............................................................................TGTTAACTGTAAGACTGTCTCT..................................... 22 1 169.00 81.00 15.00 73.00 ............................................................................TGTTAACTGTAAGACTGTTTCT..................................... 22 1 161.00 80.00 8.00 73.00 ............................................................................TGTTGACTGTGAGACTGTGTCT..................................... 22 1 151.00 13.00 0.00 138.00 ............................................................................TGTTAACTGTAGGACTGTGTC...................................... 21 1 146.00 9.00 1.00 136.00 ............................................................................TGTTAACTGTAAGACTGTGCCT..................................... 22 1 123.00 12.00 10.00 101.00 ............................................................................TCTTAACTGTAAGACTGTGTCT..................................... 22 1 119.00 13.00 23.00 83.00 ............................................................................TGTTAAATGTAAGACTGTGTCT..................................... 22 1 116.00 6.00 2.00 108.00 ............................................................................TGTTAACTGTAAGACTGCGTCT..................................... 22 1 111.00 17.00 12.00 82.00 ............................................................................TGTTAACTGTAATACTGTGTCT..................................... 22 1 105.00 10.00 8.00 87.00 ............................................................................TGTTAACTGTAAGACTxTGTCT..................................... 21 2 52.50 4.50 6.50 41.50 ............................................................................TGTTAACTGCAAGACTGTGTCT..................................... 22 1 99.00 14.00 10.00 75.00 ............................................................................TGTTAACTGTAAGGCTGTGTCT..................................... 22 1 97.00 10.00 14.00 73.00 ............................................................................CGTTAACTGTAAGACTGTGTCT..................................... 22 1 96.00 9.00 11.00 76.00 ............................................................................TGTTAACTGTAAGACTGTGACT..................................... 22 1 93.00 3.00 3.00 87.00 ............................................................................TGTTAACTGTAAGACTGTGTCA..................................... 22 1 93.00 12.00 2.00 79.00 .............................................................................TTTAACTGTAAGACTGTGTCT..................................... 21 1 91.00 16.00 12.00 63.00 ............................................................................TGTTAACCGTAAGACTGTGTCT..................................... 22 1 91.00 11.00 11.00 69.00 ..............................................................................TTAACTGTAAGACTGTGTCT..................................... 20 1 90.00 13.00 11.00 66.00 ............................................................................TGTTAACTGTAAGACTTTGTCT..................................... 22 1 90.00 8.00 7.00 75.00 ............................................................................TGCTAACTGTAAGACTGTGTCT..................................... 22 1 80.00 13.00 12.00 55.00 ............................................................................TTTTAACTGTAAGACTGTGTCT..................................... 22 1 79.00 9.00 6.00 64.00 ...........................................................................CTGTTAACTGTAAGACTGTGTCT..................................... 23 1 75.00 6.00 6.00 63.00 ............................................................................TGTTAACTGTAAGACCGTGTCT..................................... 22 1 73.00 13.00 10.00 50.00 ............................................................................TGTTAGCTGTAAGACTGTGTCT..................................... 22 1 72.00 7.00 13.00 52.00 ............................................................................TGTTAACTGTAAGACTGTGTAT..................................... 22 1 69.00 2.00 4.00 63.00 ............................................................................TGTTAACTGTAACACTGTGTCT..................................... 22 1 67.00 12.00 8.00 47.00 ............................................................................TGTTAACTGTxAGACTGTGTCT..................................... 21 1 64.00 5.00 29.00 30.00 ............................................................................TGTTAACTGTAAGATTGTGTCT..................................... 22 1 61.00 5.00 34.00 22.00 ............................................................................TGTTAACTGAAAGACTGTGTCT..................................... 22 1 61.00 4.00 2.00 55.00 ............................................................................TGTTAATTGTAAGACTGTGTCT..................................... 22 1 60.00 8.00 19.00 33.00 ............................................................................TGTTAACTGTCAGACTGTGTCT..................................... 22 1 59.00 10.00 8.00 41.00 ......................................ACATAGTCATACGGTGAATGTT........................................................................... 22 1 58.00 1.00 40.00 17.00 ............................................................................TGTTAACTGTAAGACTGTGTTT..................................... 22 1 58.00 7.00 15.00 36.00 ...........................................................................ATGTTAACTGTGAGACTGTGTCT..................................... 23 1 56.00 4.00 1.00 51.00 ............................................................................TATTAACTGTAAGACTGTGTCT..................................... 22 1 56.00 3.00 2.00 51.00 ............................................................................TGTTAACTGTAAGACTGTGTCTTT................................... 24 1 53.00 17.00 3.00 33.00 ............................................................................TGTTAACTGTGAGACTGTGTC...................................... 21 1 53.00 7.00 2.00 44.00 ............................................................................TGTTAACTATAAGACTGTGTCT..................................... 22 1 52.00 2.00 6.00 44.00 ............................................................................TGTTAACTGTGAGACTGTGT....................................... 20 1 51.00 3.00 0.00 48.00 ............................................................................TGTTAACAGTAAGACTGTGTCT..................................... 22 1 50.00 0.00 1.00 49.00 ............................................................................TGTCAACTGTAAGACTGTGTCT..................................... 22 1 48.00 9.00 2.00 37.00 ............................................................................TGTTAACTTTAAGACTGTGTCT..................................... 22 1 48.00 2.00 4.00 42.00 ............................................................................AGTTAACTGTAAGACTGTGTCT..................................... 22 1 47.00 3.00 4.00 40.00 ............................................................................TGTTAACTGTAAGACTCTGTCT..................................... 22 1 46.00 7.00 5.00 34.00 ............................................................................TGTTAACTGTAAGACTGAGTCT..................................... 22 1 43.00 3.00 5.00 35.00 ............................................................................TGTTAACTGTAAGCCTGTGTCT..................................... 22 1 42.00 7.00 8.00 27.00 ............................................................................TGTTAACTGTAAGACTGGGTCT..................................... 22 1 42.00 9.00 2.00 31.00 ...........................................................................ATGTTAACTGTAAGACTGTGT....................................... 21 1 40.00 5.00 1.00 34.00 ............................................................................TGTTAACTGTAGGACTGTGT....................................... 20 1 40.00 5.00 0.00 35.00 ............................................................................TGTAAACTGTAAGACTGTGTCT..................................... 22 1 39.00 2.00 4.00 33.00 ............................................................................TGTTAACTGTTAGACTGTGTCT..................................... 22 1 39.00 1.00 18.00 20.00 ............................................................................TGTTAACTGTAAGACTGTGTCTAA................................... 24 1 38.00 10.00 11.00 17.00 ............................................................................TGTTAACTCTAAGACTGTGTCT..................................... 22 1 38.00 7.00 7.00 24.00 ............................................................................TGTTAACTGTATGACTGTGTCT..................................... 22 1 38.00 6.00 16.00 16.00 ............................................................................GGTTAACTGTAAGACTGTGTCT..................................... 22 1 37.00 2.00 0.00 35.00 ............................................................................TGTTCACTGTAAGACTGTGTCT..................................... 22 1 36.00 7.00 6.00 23.00 ............................................................................TGTTAACTGTAAGACTATGTCT..................................... 22 1 35.00 6.00 4.00 25.00 ............................................................................TGTTAACTGTAAAACTGTGTCT..................................... 22 1 32.00 3.00 6.00 23.00 ......................................ACATAGTCATACGGTGAATGTTG.......................................................................... 23 1 31.00 3.00 11.00 17.00 ............................................................................TGTTAACTGTAAGAATGTGTCT..................................... 22 1 30.00 2.00 10.00 18.00 ...........................................................................ATGTTAACTGTAAGACTGTGTC...................................... 22 1 29.00 6.00 1.00 22.00 ............................................................................TGTTAACTGTGAGACTGTCT....................................... 20 1 29.00 3.00 1.00 25.00 ............................................................................TGTTGACTGTAGGACTGTGTCT..................................... 22 1 27.00 2.00 0.00 25.00 ......................................ACATAGTCATACGGTGAATGT............................................................................ 21 1 27.00 5.00 2.00 20.00 ............................................................................TGTTAACTGCGAGACTGTGTCT..................................... 22 1 26.00 3.00 0.00 23.00 ............................................................................TGTTAACTGTGAGACTGTCTCT..................................... 22 1 26.00 8.00 0.00 18.00 ............................................................................TGATAACTGTAAGACTGTGTCT..................................... 22 1 25.00 0.00 1.00 24.00 ............................................................................TGTTAACTGTAAGACTGTGTCTC.................................... 23 1 24.00 6.00 5.00 13.00 ............................................................................TGTTAACTGTGAGACTGTTTCT..................................... 22 1 22.00 9.00 0.00 13.00 ............................................................................TGTTAACTGTGGGACTGTGTC...................................... 21 1 21.00 0.00 0.00 21.00 ............................................................................TGTTAACTGTAAGACTGTG........................................ 19 1 21.00 1.00 0.00 20.00 ............................................................................TGTTAACTGTGAGACTGTGTAT..................................... 22 1 20.00 0.00 0.00 20.00 ............................................................................TGTTAACTGTACGACTGTGTCT..................................... 22 1 20.00 3.00 5.00 12.00 ............................................................................TGTTACCTGTAAGACTGTGTCT..................................... 22 1 19.00 3.00 3.00 13.00 ............................................................................TGTTAACTGTGAGACTGTGTCC..................................... 22 1 19.00 3.00 0.00 16.00 ............................................................................TGTTAACTGTGAGACTGTGACT..................................... 22 1 18.00 0.00 0.00 18.00 ............................................................................TGTTAACTGTGAGACTGTATCT..................................... 22 1 18.00 5.00 0.00 13.00 ............................................................................TGTTAACTGTAAGTCTGTGTCT..................................... 22 1 17.00 3.00 5.00 9.00 ............................................................................TGTTAACTGTGAGGCTGTGTCT..................................... 22 1 17.00 2.00 0.00 15.00 ............................................................................TGTTAACCGTGAGACTGTGTCT..................................... 22 1 16.00 2.00 0.00 14.00 ............................................................................TTTTAACTGTGAGACTGTGTCT..................................... 22 1 16.00 0.00 1.00 15.00 .............................................................................TTTAACTGTGAGACTGTGTCT..................................... 21 1 16.00 0.00 0.00 16.00 ............................................................................TGTTAACTGxxAGACTGTGTCT..................................... 20 1 15.00 2.00 1.00 12.00 ...........................................................................ATGTTAACTGTAGGACTGTGTCT..................................... 23 1 15.00 1.00 0.00 14.00 ............................................................................TGTTAGCTGTGAGACTGTGTCT..................................... 22 1 15.00 4.00 1.00 10.00 ............................................................................TGTTAACTGTAAGACAGTGTCT..................................... 22 1 15.00 0.00 6.00 9.00
67	super_38:222877-222904 +	10.83	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA AAAGACCGGCGGCT---------------------------------------------------------------------------------------------TCAGCTCTACCACC-------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head		None
87	super_14451:305-333 +	10.53	GATGAA-----CGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA TCCGCAGTCTCCGGGAAATAATTGATCCC--------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head		None
48	super_15:811364-811367 +	2.26	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA GCTG----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head	None	None

droYak2 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
79	chr3R:18443923-18444058 -	85.76	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA-CAGCCCAGTATCAA A---AATCGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACACCAGCCACATCAGCC--ACATCGG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ............................................................................TGTTAACTGTAAGACTGTGTCT.......................................... 22 2 70673.50 800.00 4712.00 3699.00 10916.00 50546.50 ............................................................................TGTTAACTGTGAGACTGTGTCT.......................................... 22 2 9388.00 5.50 657.00 256.50 1444.50 7024.50 ............................................................................TGTTAACTGTAAGACTGTGTCC.......................................... 22 2 7245.50 2.50 7.50 8.00 17.50 7210.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCT.......................................... 23 2 1298.50 7.50 56.50 35.00 161.50 1038.00 ............................................................................TGTTAACTGTGGGACTGTGTCT.......................................... 22 2 1268.00 0.50 76.00 15.50 160.50 1015.50 ............................................................................TGTTAACTGTAAGACTGTGTCG.......................................... 22 2 1203.50 0.50 2.00 1.00 4.50 1195.50 ............................................................................TGTTAACTGTGAGACTGTGTCC.......................................... 22 2 1044.00 0.00 0.50 0.50 1.50 1041.50 ............................................................................TGTTAACTGTAAGACTGTGTC........................................... 21 2 1038.00 2.00 55.00 40.00 164.00 777.00 ............................................................................TGTTAACTGTAATACTGTGTCT.......................................... 22 2 1001.00 1.00 48.00 0.50 74.50 877.00 ............................................................................TGTTAACTGTAGGACTGTGTCT.......................................... 22 2 978.50 0.00 59.00 25.50 145.00 749.00 ............................................................................TTTTAACTGTAAGACTGTGTCT.......................................... 22 2 760.00 0.00 1.00 3.50 6.50 749.00 ..............................................................................TTAACTGTAAGACTGTGTCT.......................................... 20 2 479.50 1.00 1.00 6.00 2.00 469.50 .............................................................................TTTAACTGTAAGACTGTGTCT.......................................... 21 2 445.00 0.00 0.00 5.50 0.50 439.00 ............................................................................TCTTAACTGTAAGACTGTGTCT.......................................... 22 2 353.50 0.00 2.50 3.50 5.50 342.00 ............................................................................TGTTAACTGTAAGACTGTGTCTT......................................... 23 2 349.50 18.00 46.50 54.00 138.00 93.00 ............................................................................TGTTAACTGTAACACTGTGTCT.......................................... 22 2 342.50 0.00 2.00 2.50 9.00 329.00 ............................................................................TGTTAACTGTAAGACTTTGTCT.......................................... 22 2 263.00 0.00 10.50 0.50 30.00 222.00 ............................................................................TGTTAACTGTACGACTGTGTCT.......................................... 22 2 255.00 2.00 9.50 0.50 63.00 180.00 ............................................................................TGGTAACTGTAAGACTGTGTCT.......................................... 22 2 249.50 3.50 47.50 0.50 196.00 2.00 ............................................................................TGTTAACTTTAAGACTGTGTCT.......................................... 22 2 204.50 0.50 14.50 2.00 23.00 164.50 ............................................................................TGTTAACTGTGAGACTGTGTCG.......................................... 22 2 185.00 0.00 0.00 0.00 0.50 184.50 .............................................................................GTTAACTGTAAGACTGTGTCT.......................................... 21 2 166.50 4.50 6.00 23.00 30.50 102.50 ...........................................................................ATGTTAACTGTAAGACTGTGTCC.......................................... 23 2 148.00 0.00 0.00 0.00 0.00 148.00 ............................................................................TGTTGACTGTAAGACTGTGTCT.......................................... 22 2 147.50 2.50 24.00 5.00 35.50 80.50 ............................................................................TGTTAACTGTAAGACTGTGT............................................ 20 2 141.50 1.00 32.00 13.50 81.00 14.00 ............................................................................TGTTGACTGTGAGACTGTGTCT.......................................... 22 2 129.50 0.00 12.50 2.50 26.00 88.50 ............................................................................TGTTAACTGTAAGACTxTGTCT.......................................... 21 4 64.75 0.00 0.00 1.00 0.25 63.50 ............................................................................TGTTAACTGTAATACTGTGTCC.......................................... 22 2 125.00 0.00 0.00 0.00 0.50 124.50 ............................................................................TGTTAACTGTAAGACTGTCT............................................ 20 2 117.50 1.00 2.00 10.00 6.50 98.00 ............................................................................TGTTAACTGTAAGACTGTTTCT.......................................... 22 2 116.00 0.50 20.00 1.50 54.50 39.50 ............................................................................TGTTAACTGTAAGGCTGTGTCT.......................................... 22 2 114.00 1.50 7.00 3.50 28.50 73.50 ............................................................................TGTTAACTGTAAGACTGTGCCT.......................................... 22 2 113.50 1.00 5.50 7.00 27.00 73.00 ............................................................................TGTTAACTGTAAGACTGTGTCTA......................................... 23 2 111.50 12.00 16.00 15.50 29.50 38.50 ............................................................................TGTTAACTGTAAGACTGGGTCT.......................................... 22 2 97.00 1.00 5.00 4.50 24.00 62.50 ............................................................................TTTTAACTGTAAGACTGTGTCC.......................................... 22 2 93.50 0.00 0.00 0.00 0.00 93.50 ............................................................................TGTTAACTGTAGGACTGTGTCC.......................................... 22 2 93.50 0.00 0.00 0.00 0.00 93.50 ............................................................................TGTTAACTGTAAGACTGCGTCT.......................................... 22 2 85.00 3.00 6.00 3.00 34.00 39.00 ............................................................................TGTTAACTGTAAGCCTGTGTCT.......................................... 22 2 81.00 0.50 4.50 0.50 71.50 4.00 ............................................................................TGTTAACTGCAAGACTGTGTCT.......................................... 22 2 76.00 1.00 4.50 4.00 32.00 34.50 ..............................................................................TTAACTGTAAGACTGTGTCC.......................................... 20 2 70.00 0.00 0.00 0.00 0.00 70.00 .............................................................................TTTAACTGTAAGACTGTGTCC.......................................... 21 2 68.00 0.00 0.00 0.00 0.00 68.00 ............................................................................TGTTAACTGTGAGACTGTGTC........................................... 21 2 66.00 0.00 2.00 1.00 6.50 56.50 ...........................................................................CTGTTAACTGTAAGACTGTGTCT.......................................... 23 2 63.00 0.50 1.50 2.50 10.00 48.50 ............................................................................TGCTAACTGTAAGACTGTGTCT.......................................... 22 2 60.00 1.50 6.50 5.50 19.00 27.50 ............................................................................TGTTAACTGTAAGACTCTGTCT.......................................... 22 2 58.50 1.00 3.00 1.50 13.00 40.00 ............................................................................TGTTAACTCTAAGACTGTGTCT.......................................... 22 2 58.00 0.00 1.50 2.00 4.50 50.00 ............................................................................TGTTAGCTGTAAGACTGTGTCT.......................................... 22 2 57.50 0.50 7.00 3.50 23.50 23.00 ............................................................................TGTTAACTGGAAGACTGTGTCT.......................................... 22 2 54.50 0.50 6.50 1.50 33.00 13.00 ............................................................................TGTTAACTGTCAGACTGTGTCT.......................................... 22 2 54.50 3.50 5.50 3.00 42.50 0.00 ............................................................................TGTTAACTGTAAGACCGTGTCT.......................................... 22 2 53.50 1.00 4.50 4.00 9.50 34.50 ............................................................................TGTTAACTGTAACACTGTGTCC.......................................... 22 2 53.00 0.00 0.00 0.00 0.00 53.00 ...........................................................................ATGTTAACTGTGAGACTGTGTCT.......................................... 23 2 51.50 0.00 3.50 1.50 8.00 38.50 ............................................................................TGTTAACCGTAAGACTGTGTCT.......................................... 22 2 50.00 0.00 4.00 1.50 7.00 37.50 ............................................................................TTTTAACTGTGAGACTGTGTCT.......................................... 22 2 50.00 0.00 0.50 0.50 1.50 47.50 ............................................................................TGTTAACTGTxATACTGTGTCT.......................................... 21 2 49.50 0.00 0.00 0.00 0.00 49.50 ............................................................................TGTTAACTGTAAGTCTGTGTCT.......................................... 22 2 49.00 0.00 6.50 0.00 38.00 4.50 ............................................................................CGTTAACTGTAAGACTGTGTCT.......................................... 22 2 46.50 1.00 7.00 2.00 10.50 26.00 ............................................................................TGTTAAATGTAAGACTGTGTCT.......................................... 22 2 44.00 2.00 5.00 1.00 25.00 11.00 ............................................................................TGTTAACTGTAAGAATGTGTCT.......................................... 22 2 42.00 1.50 3.00 1.00 21.00 15.50 ............................................................................TGTTAACTGTAAGACTGTGTCTC......................................... 23 2 42.00 4.50 6.50 1.50 12.00 17.50 ............................................................................TGTTAACTGTxACACTGTGTCT.......................................... 21 2 42.00 0.00 0.00 0.00 0.00 42.00 ............................................................................TGTTAACTGTAAGACTGTCTCT.......................................... 22 2 41.00 0.00 2.00 4.50 9.00 25.50 ............................................................................TGGTAACTGTGAGACTGTGTCT.......................................... 22 2 41.00 0.00 9.50 0.00 31.00 0.50 ............................................................................TCTTAACTGTAAGACTGTGTCC.......................................... 22 2 40.50 0.00 0.00 0.00 0.00 40.50 ............................................................................TGTTAACTGTAAGACTGTGGCT.......................................... 22 2 40.50 0.50 5.00 0.00 12.50 22.50 ............................................................................TGTTAACTGTAAGACTATGTCT.......................................... 22 2 37.00 0.00 6.00 2.50 8.00 20.50 ............................................................................TGTTAACTATAAGACTGTGTCT.......................................... 22 2 36.50 0.00 5.50 0.50 11.50 19.00 ............................................................................TGTTAACTGTAAxACTGTGTCT.......................................... 21 2 36.00 0.00 0.00 0.00 0.00 36.00 ............................................................................TGTTAACTGTGCGACTGTGTCT.......................................... 22 2 33.50 0.00 3.00 0.00 5.00 25.50 ............................................................................TGTTAACTGTGATACTGTGTCT.......................................... 22 2 33.00 0.00 5.50 0.00 4.50 23.00 ............................................................................TGTTAACTGTGAGGCTGTGTCT.......................................... 22 2 32.00 0.00 1.00 0.50 7.50 23.00 ............................................................................TGTTAACTGTAxxACTGTGTCT.......................................... 20 2 31.50 0.00 0.00 0.00 0.00 31.50 ............................................................................TGTTAACTGTxAGACTGTGTCT.......................................... 21 2 31.50 0.50 1.00 1.00 1.50 27.50 ............................................................................TGTTAACTGTAAGACTGTGTCA.......................................... 22 2 31.00 0.50 3.50 2.50 13.50 11.00 ............................................................................TATTAACTGTAAGACTGTGTCT.......................................... 22 2 30.50 0.50 2.50 1.50 7.00 19.00 ............................................................................TGTTAACTGTAAAACTGTGTCT.......................................... 22 2 30.50 0.50 3.00 0.50 5.00 21.50 ............................................................................TGGTAACTGGAAGACTGTGTCT.......................................... 22 2 30.00 0.00 6.00 0.00 24.00 0.00 ...............................................................................TAACTGTAAGACTGTGTCT.......................................... 19 2 30.00 0.00 0.00 0.50 1.00 28.50 ............................................................................TGTTAACTGTAAGACTGTGTTT.......................................... 22 2 30.00 0.00 3.00 0.00 19.00 8.00 ............................................................................TGTTAACTGTAATACTGTGTCG.......................................... 22 2 29.00 0.00 0.00 0.00 0.00 29.00 ............................................................................TGTTAACTGTGAGACTTTGTCT.......................................... 22 2 28.50 0.00 1.50 0.00 1.50 25.50 ..............................................................................TTAACTGTGAGACTGTGTCT.......................................... 20 2 28.00 0.00 0.00 0.00 0.50 27.50 ............................................................................TGTTAACTGTAAGACTGTGTAT.......................................... 22 2 27.50 3.00 6.00 0.50 13.00 5.00 ............................................................................TGATAACTGTAAGACTGTGTCT.......................................... 22 2 27.00 1.50 5.00 0.50 18.50 1.50 ............................................................................TGTTAACTTTAAGACTGTGTCC.......................................... 22 2 25.00 0.00 0.00 0.00 0.00 25.00 ............................................................................TGTGAACTGTAAGACTGTGTCT.......................................... 22 2 25.00 0.50 2.00 0.50 21.50 0.50 ...........................................................................ATGTTAACTGTAAGACTGTGTC........................................... 22 2 25.00 0.00 1.00 0.50 3.00 20.50 ............................................................................TGTTAACTGTAAGATTGTGTCT.......................................... 22 2 24.50 0.50 0.50 1.50 5.50 16.50 ............................................................................TGTTAACTGTAAGACTTTGTCC.......................................... 22 2 24.50 0.00 0.00 0.00 0.00 24.50 ............................................................................TGTTAACTGTACGACTGTGTCC.......................................... 22 2 24.00 0.00 0.00 0.00 0.00 24.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCG.......................................... 23 2 23.50 0.00 0.00 0.00 0.00 23.50 ............................................................................TCTTAACTGTGAGACTGTGTCT.......................................... 22 2 22.50 0.00 0.00 0.50 1.00 21.00 ............................................................................TGTTAATTGTAAGACTGTGTCT.......................................... 22 2 22.50 0.50 1.50 0.50 10.50 9.50 .............................................................................TTTAACTGTGAGACTGTGTCT.......................................... 21 2 22.00 0.00 0.00 0.50 0.00 21.50 ...........................................................................ATGTTAACTGTGGGACTGTGTCT.......................................... 23 2 22.00 0.00 0.50 0.00 1.00 20.50 ............................................................................TGTTAACTxTAAGACTGTGTCT.......................................... 21 2 22.00 0.00 0.00 0.00 0.00 22.00 ............................................................................TGTCAACTGTAAGACTGTGTCT.......................................... 22 2 21.50 0.50 4.00 1.00 6.50 9.50 ............................................................................TGTTAACTTTGAGACTGTGTCT.......................................... 22 2 21.50 0.50 4.50 0.00 7.50 9.00 ................................................................................AACTGTAAGACTGTGTCT.......................................... 18 2 20.50 0.00 2.00 0.00 1.00 17.50 ............................................................................TGTTAACGGTAAGACTGTGTCT.......................................... 22 2 20.50 0.50 1.00 0.00 16.50 2.50
80	chr3R:18443902-18444010 -	37.41	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC----CAGCCACA---------------------CAGCCCAGTATCAA G--------------------------------------------------GTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACACCAGCCACATCAGCCACATCGGCCACAAACCAGCTCAGTATCG- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ............................................................................TGTTAACTGTAAGACTGTGTCT.............................................................. 22 2 70673.50 800.00 4712.00 3699.00 10916.00 50546.50 ............................................................................TGTTAACTGTGAGACTGTGTCT.............................................................. 22 2 9388.00 5.50 657.00 256.50 1444.50 7024.50 ............................................................................TGTTAACTGTAAGACTGTGTCC.............................................................. 22 2 7245.50 2.50 7.50 8.00 17.50 7210.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCT.............................................................. 23 2 1298.50 7.50 56.50 35.00 161.50 1038.00 ............................................................................TGTTAACTGTGGGACTGTGTCT.............................................................. 22 2 1268.00 0.50 76.00 15.50 160.50 1015.50 ............................................................................TGTTAACTGTAAGACTGTGTCG.............................................................. 22 2 1203.50 0.50 2.00 1.00 4.50 1195.50 ............................................................................TGTTAACTGTGAGACTGTGTCC.............................................................. 22 2 1044.00 0.00 0.50 0.50 1.50 1041.50 ............................................................................TGTTAACTGTAAGACTGTGTC............................................................... 21 2 1038.00 2.00 55.00 40.00 164.00 777.00 ............................................................................TGTTAACTGTAATACTGTGTCT.............................................................. 22 2 1001.00 1.00 48.00 0.50 74.50 877.00 ............................................................................TGTTAACTGTAGGACTGTGTCT.............................................................. 22 2 978.50 0.00 59.00 25.50 145.00 749.00 ............................................................................TTTTAACTGTAAGACTGTGTCT.............................................................. 22 2 760.00 0.00 1.00 3.50 6.50 749.00 ..............................................................................TTAACTGTAAGACTGTGTCT.............................................................. 20 2 479.50 1.00 1.00 6.00 2.00 469.50 .............................................................................TTTAACTGTAAGACTGTGTCT.............................................................. 21 2 445.00 0.00 0.00 5.50 0.50 439.00 ............................................................................TCTTAACTGTAAGACTGTGTCT.............................................................. 22 2 353.50 0.00 2.50 3.50 5.50 342.00 ............................................................................TGTTAACTGTAAGACTGTGTCTT............................................................. 23 2 349.50 18.00 46.50 54.00 138.00 93.00 ............................................................................TGTTAACTGTAACACTGTGTCT.............................................................. 22 2 342.50 0.00 2.00 2.50 9.00 329.00 ............................................................................TGTTAACTGTAAGACTTTGTCT.............................................................. 22 2 263.00 0.00 10.50 0.50 30.00 222.00 ............................................................................TGTTAACTGTACGACTGTGTCT.............................................................. 22 2 255.00 2.00 9.50 0.50 63.00 180.00 ............................................................................TGGTAACTGTAAGACTGTGTCT.............................................................. 22 2 249.50 3.50 47.50 0.50 196.00 2.00 ............................................................................TGTTAACTTTAAGACTGTGTCT.............................................................. 22 2 204.50 0.50 14.50 2.00 23.00 164.50 ............................................................................TGTTAACTGTGAGACTGTGTCG.............................................................. 22 2 185.00 0.00 0.00 0.00 0.50 184.50 .............................................................................GTTAACTGTAAGACTGTGTCT.............................................................. 21 2 166.50 4.50 6.00 23.00 30.50 102.50 ...........................................................................ATGTTAACTGTAAGACTGTGTCC.............................................................. 23 2 148.00 0.00 0.00 0.00 0.00 148.00 ............................................................................TGTTGACTGTAAGACTGTGTCT.............................................................. 22 2 147.50 2.50 24.00 5.00 35.50 80.50 ............................................................................TGTTAACTGTAAGACTGTGT................................................................ 20 2 141.50 1.00 32.00 13.50 81.00 14.00 ............................................................................TGTTGACTGTGAGACTGTGTCT.............................................................. 22 2 129.50 0.00 12.50 2.50 26.00 88.50 ............................................................................TGTTAACTGTAAGACTxTGTCT.............................................................. 21 4 64.75 0.00 0.00 1.00 0.25 63.50 ............................................................................TGTTAACTGTAATACTGTGTCC.............................................................. 22 2 125.00 0.00 0.00 0.00 0.50 124.50 ............................................................................TGTTAACTGTAAGACTGTCT................................................................ 20 2 117.50 1.00 2.00 10.00 6.50 98.00 ............................................................................TGTTAACTGTAAGACTGTTTCT.............................................................. 22 2 116.00 0.50 20.00 1.50 54.50 39.50 ............................................................................TGTTAACTGTAAGGCTGTGTCT.............................................................. 22 2 114.00 1.50 7.00 3.50 28.50 73.50 ............................................................................TGTTAACTGTAAGACTGTGCCT.............................................................. 22 2 113.50 1.00 5.50 7.00 27.00 73.00 ............................................................................TGTTAACTGTAAGACTGTGTCTA............................................................. 23 2 111.50 12.00 16.00 15.50 29.50 38.50 ............................................................................TGTTAACTGTAAGACTGGGTCT.............................................................. 22 2 97.00 1.00 5.00 4.50 24.00 62.50 ............................................................................TGTTAACTGTAGGACTGTGTCC.............................................................. 22 2 93.50 0.00 0.00 0.00 0.00 93.50 ............................................................................TTTTAACTGTAAGACTGTGTCC.............................................................. 22 2 93.50 0.00 0.00 0.00 0.00 93.50 ............................................................................TGTTAACTGTAAGACTGCGTCT.............................................................. 22 2 85.00 3.00 6.00 3.00 34.00 39.00 ............................................................................TGTTAACTGTAAGCCTGTGTCT.............................................................. 22 2 81.00 0.50 4.50 0.50 71.50 4.00 ............................................................................TGTTAACTGCAAGACTGTGTCT.............................................................. 22 2 76.00 1.00 4.50 4.00 32.00 34.50 ..............................................................................TTAACTGTAAGACTGTGTCC.............................................................. 20 2 70.00 0.00 0.00 0.00 0.00 70.00 .............................................................................TTTAACTGTAAGACTGTGTCC.............................................................. 21 2 68.00 0.00 0.00 0.00 0.00 68.00 ............................................................................TGTTAACTGTGAGACTGTGTC............................................................... 21 2 66.00 0.00 2.00 1.00 6.50 56.50 ...........................................................................CTGTTAACTGTAAGACTGTGTCT.............................................................. 23 2 63.00 0.50 1.50 2.50 10.00 48.50 ............................................................................TGCTAACTGTAAGACTGTGTCT.............................................................. 22 2 60.00 1.50 6.50 5.50 19.00 27.50 ............................................................................TGTTAACTGTAAGACTCTGTCT.............................................................. 22 2 58.50 1.00 3.00 1.50 13.00 40.00 ............................................................................TGTTAACTCTAAGACTGTGTCT.............................................................. 22 2 58.00 0.00 1.50 2.00 4.50 50.00 ............................................................................TGTTAGCTGTAAGACTGTGTCT.............................................................. 22 2 57.50 0.50 7.00 3.50 23.50 23.00 ............................................................................TGTTAACTGTCAGACTGTGTCT.............................................................. 22 2 54.50 3.50 5.50 3.00 42.50 0.00 ............................................................................TGTTAACTGGAAGACTGTGTCT.............................................................. 22 2 54.50 0.50 6.50 1.50 33.00 13.00 ............................................................................TGTTAACTGTAAGACCGTGTCT.............................................................. 22 2 53.50 1.00 4.50 4.00 9.50 34.50 ............................................................................TGTTAACTGTAACACTGTGTCC.............................................................. 22 2 53.00 0.00 0.00 0.00 0.00 53.00 ...........................................................................ATGTTAACTGTGAGACTGTGTCT.............................................................. 23 2 51.50 0.00 3.50 1.50 8.00 38.50 ............................................................................TGTTAACCGTAAGACTGTGTCT.............................................................. 22 2 50.00 0.00 4.00 1.50 7.00 37.50 ............................................................................TTTTAACTGTGAGACTGTGTCT.............................................................. 22 2 50.00 0.00 0.50 0.50 1.50 47.50 ............................................................................TGTTAACTGTxATACTGTGTCT.............................................................. 21 2 49.50 0.00 0.00 0.00 0.00 49.50 ............................................................................TGTTAACTGTAAGTCTGTGTCT.............................................................. 22 2 49.00 0.00 6.50 0.00 38.00 4.50 ............................................................................CGTTAACTGTAAGACTGTGTCT.............................................................. 22 2 46.50 1.00 7.00 2.00 10.50 26.00 ............................................................................TGTTAAATGTAAGACTGTGTCT.............................................................. 22 2 44.00 2.00 5.00 1.00 25.00 11.00 ............................................................................TGTTAACTGTxACACTGTGTCT.............................................................. 21 2 42.00 0.00 0.00 0.00 0.00 42.00 ............................................................................TGTTAACTGTAAGACTGTGTCTC............................................................. 23 2 42.00 4.50 6.50 1.50 12.00 17.50 ............................................................................TGTTAACTGTAAGAATGTGTCT.............................................................. 22 2 42.00 1.50 3.00 1.00 21.00 15.50 ............................................................................TGGTAACTGTGAGACTGTGTCT.............................................................. 22 2 41.00 0.00 9.50 0.00 31.00 0.50 ............................................................................TGTTAACTGTAAGACTGTCTCT.............................................................. 22 2 41.00 0.00 2.00 4.50 9.00 25.50 ............................................................................TGTTAACTGTAAGACTGTGGCT.............................................................. 22 2 40.50 0.50 5.00 0.00 12.50 22.50 ............................................................................TCTTAACTGTAAGACTGTGTCC.............................................................. 22 2 40.50 0.00 0.00 0.00 0.00 40.50 ............................................................................TGTTAACTGTAAGACTATGTCT.............................................................. 22 2 37.00 0.00 6.00 2.50 8.00 20.50 ............................................................................TGTTAACTATAAGACTGTGTCT.............................................................. 22 2 36.50 0.00 5.50 0.50 11.50 19.00 ............................................................................TGTTAACTGTAAxACTGTGTCT.............................................................. 21 2 36.00 0.00 0.00 0.00 0.00 36.00 ............................................................................TGTTAACTGTGCGACTGTGTCT.............................................................. 22 2 33.50 0.00 3.00 0.00 5.00 25.50 ............................................................................TGTTAACTGTGATACTGTGTCT.............................................................. 22 2 33.00 0.00 5.50 0.00 4.50 23.00 ............................................................................TGTTAACTGTGAGGCTGTGTCT.............................................................. 22 2 32.00 0.00 1.00 0.50 7.50 23.00 ............................................................................TGTTAACTGTAxxACTGTGTCT.............................................................. 20 2 31.50 0.00 0.00 0.00 0.00 31.50 ............................................................................TGTTAACTGTxAGACTGTGTCT.............................................................. 21 2 31.50 0.50 1.00 1.00 1.50 27.50 ............................................................................TGTTAACTGTAAGACTGTGTCA.............................................................. 22 2 31.00 0.50 3.50 2.50 13.50 11.00 ............................................................................TGTTAACTGTAAAACTGTGTCT.............................................................. 22 2 30.50 0.50 3.00 0.50 5.00 21.50 ............................................................................TATTAACTGTAAGACTGTGTCT.............................................................. 22 2 30.50 0.50 2.50 1.50 7.00 19.00 ...............................................................................TAACTGTAAGACTGTGTCT.............................................................. 19 2 30.00 0.00 0.00 0.50 1.00 28.50 ............................................................................TGGTAACTGGAAGACTGTGTCT.............................................................. 22 2 30.00 0.00 6.00 0.00 24.00 0.00 ............................................................................TGTTAACTGTAAGACTGTGTTT.............................................................. 22 2 30.00 0.00 3.00 0.00 19.00 8.00 ............................................................................TGTTAACTGTAATACTGTGTCG.............................................................. 22 2 29.00 0.00 0.00 0.00 0.00 29.00 ............................................................................TGTTAACTGTGAGACTTTGTCT.............................................................. 22 2 28.50 0.00 1.50 0.00 1.50 25.50 ..............................................................................TTAACTGTGAGACTGTGTCT.............................................................. 20 2 28.00 0.00 0.00 0.00 0.50 27.50 ............................................................................TGTTAACTGTAAGACTGTGTAT.............................................................. 22 2 27.50 3.00 6.00 0.50 13.00 5.00 ............................................................................TGATAACTGTAAGACTGTGTCT.............................................................. 22 2 27.00 1.50 5.00 0.50 18.50 1.50 ...........................................................................ATGTTAACTGTAAGACTGTGTC............................................................... 22 2 25.00 0.00 1.00 0.50 3.00 20.50 ............................................................................TGTGAACTGTAAGACTGTGTCT.............................................................. 22 2 25.00 0.50 2.00 0.50 21.50 0.50 ............................................................................TGTTAACTTTAAGACTGTGTCC.............................................................. 22 2 25.00 0.00 0.00 0.00 0.00 25.00 ............................................................................TGTTAACTGTAAGATTGTGTCT.............................................................. 22 2 24.50 0.50 0.50 1.50 5.50 16.50 ............................................................................TGTTAACTGTAAGACTTTGTCC.............................................................. 22 2 24.50 0.00 0.00 0.00 0.00 24.50 ............................................................................TGTTAACTGTACGACTGTGTCC.............................................................. 22 2 24.00 0.00 0.00 0.00 0.00 24.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCG.............................................................. 23 2 23.50 0.00 0.00 0.00 0.00 23.50 ............................................................................TCTTAACTGTGAGACTGTGTCT.............................................................. 22 2 22.50 0.00 0.00 0.50 1.00 21.00 ............................................................................TGTTAATTGTAAGACTGTGTCT.............................................................. 22 2 22.50 0.50 1.50 0.50 10.50 9.50 .............................................................................TTTAACTGTGAGACTGTGTCT.............................................................. 21 2 22.00 0.00 0.00 0.50 0.00 21.50 ...........................................................................ATGTTAACTGTGGGACTGTGTCT.............................................................. 23 2 22.00 0.00 0.50 0.00 1.00 20.50 ............................................................................TGTTAACTxTAAGACTGTGTCT.............................................................. 21 2 22.00 0.00 0.00 0.00 0.00 22.00 ............................................................................TGTCAACTGTAAGACTGTGTCT.............................................................. 22 2 21.50 0.50 4.00 1.00 6.50 9.50 ............................................................................TGTTAACTTTGAGACTGTGTCT.............................................................. 22 2 21.50 0.50 4.50 0.00 7.50 9.00 ............................................................................TGTTAACGGTAAGACTGTGTCT.............................................................. 22 2 20.50 0.50 1.00 0.00 16.50 2.50 ................................................................................AACTGTAAGACTGTGTCT.............................................................. 18 2 20.50 0.00 2.00 0.00 1.00 17.50
14	chr3L:10702667-10702683 +	7.81	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA GAAGT-TGGAGCAGCAGG--------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head		None
93	chrX:1347901-1347902 -	1.5	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA AA------------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head	None	None
110	chrX:7476977-7476978 -	1.5	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA GA------------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head	None	None

droEre2 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
64	scaffold_4820:10463202-10463335 +	93.37	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACAC-AGCCCAGTATCAA GATGAACGAAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACCAGCC--ACACCAG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ............................................................................TGTTAACTGTAAGACTGTGTCT...................................... 22 1 103548.00 2745.00 14806.00 0.00 85997.00 ............................................................................TGTTAACTGTGAGACTGTGTCT...................................... 22 1 8830.00 13.00 729.00 0.00 8088.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCT...................................... 23 1 1923.00 21.00 125.00 0.00 1777.00 ............................................................................TGTTAACTGTAAGACTGTGTC....................................... 21 1 1524.00 18.00 213.00 0.00 1293.00 ............................................................................TGTTAACTGTAAGACTGTGTCTT..................................... 23 1 973.00 14.00 79.00 0.00 880.00 ............................................................................TGTTAACTGTAAGACTGTGT........................................ 20 1 873.00 3.00 77.00 0.00 793.00 ............................................................................TGTTAACTGTAATACTGTGTCT...................................... 22 1 807.00 43.00 82.00 0.00 682.00 ............................................................................TGTTAACTGTAGGACTGTGTCT...................................... 22 1 728.00 4.00 90.00 0.00 634.00 .............................................................................GTTAACTGTAAGACTGTGTCT...................................... 21 1 720.00 9.00 65.00 0.00 646.00 ............................................................................TGTTAACTGTAAGACTGTGTAT...................................... 22 1 451.00 3.00 16.00 0.00 432.00 ............................................................................TGTTAACTGTGGGACTGTGTCT...................................... 22 1 432.00 0.00 45.00 0.00 387.00 ............................................................................TGTTAACTGTAAGACTTTGTCT...................................... 22 1 387.00 23.00 54.00 0.00 310.00 ............................................................................TGTTAACTGTAAGACTGTGTCTA..................................... 23 1 381.00 10.00 28.00 0.00 343.00 ............................................................................TGTTAACTGTAAGACTGTTTCT...................................... 22 1 327.00 31.00 75.00 0.00 221.00 ............................................................................TGTTAACTGTAAGAATGTGTCT...................................... 22 1 286.00 4.00 10.00 0.00 272.00 ............................................................................TGTTAAATGTAAGACTGTGTCT...................................... 22 1 284.00 3.00 15.00 0.00 266.00 ............................................................................TTTTAACTGTAAGACTGTGTCT...................................... 22 1 270.00 9.00 7.00 0.00 254.00 ............................................................................TGTTAACTTTAAGACTGTGTCT...................................... 22 1 268.00 18.00 38.00 0.00 212.00 ............................................................................TGTTAACTGTAAGACTGTCT........................................ 20 1 215.00 2.00 9.00 0.00 204.00 ............................................................................TGGTAACTGTAAGACTGTGTCT...................................... 22 1 211.00 15.00 99.00 0.00 97.00 ............................................................................TGTTAACTGTAAGACTGCGTCT...................................... 22 1 190.00 11.00 19.00 0.00 160.00 ............................................................................TGCTAACTGTAAGACTGTGTCT...................................... 22 1 186.00 7.00 15.00 0.00 164.00 ............................................................................TGTTGACTGTAAGACTGTGTCT...................................... 22 1 169.00 5.00 45.00 0.00 119.00 ............................................................................TGTTAACTGTAAGACTGTGCCT...................................... 22 1 157.00 1.00 26.00 0.00 130.00 ............................................................................TGTTAACTGTAAGACTGTGTCC...................................... 22 1 155.00 4.00 25.00 0.00 126.00 ............................................................................TGATAACTGTAAGACTGTGTCT...................................... 22 1 140.00 2.00 9.00 0.00 129.00 ............................................................................CGTTAACTGTAAGACTGTGTCT...................................... 22 1 136.00 4.00 15.00 0.00 117.00 ............................................................................TGTTAACTGTAAGGCTGTGTCT...................................... 22 1 134.00 5.00 24.00 0.00 105.00 .............................................................................TTTAACTGTAAGACTGTGTCT...................................... 21 1 129.00 0.00 1.00 0.00 128.00 ............................................................................TGTTAACTGCAAGACTGTGTCT...................................... 22 1 124.00 5.00 16.00 0.00 103.00 ..............................................................................TTAACTGTAAGACTGTGTCT...................................... 20 1 110.00 0.00 1.00 0.00 109.00 ............................................................................TGTTAACTGTAAGACCGTGTCT...................................... 22 1 107.00 4.00 11.00 0.00 92.00 ............................................................................TGTTAACTGTAAGACTGTCTCT...................................... 22 1 106.00 5.00 8.00 0.00 93.00 ............................................................................TGTTAACTGTAAGCCTGTGTCT...................................... 22 1 99.00 6.00 48.00 0.00 45.00 ............................................................................TGTTAGCTGTAAGACTGTGTCT...................................... 22 1 94.00 3.00 10.00 0.00 81.00 ............................................................................TGTTAACCGTAAGACTGTGTCT...................................... 22 1 93.00 2.00 7.00 0.00 84.00 ............................................................................TCTTAACTGTAAGACTGTGTCT...................................... 22 1 93.00 2.00 6.00 0.00 85.00 ...........................................................................CTGTTAACTGTAAGACTGTGTCT...................................... 23 1 89.00 0.00 15.00 0.00 74.00 ............................................................................TGTTAACTGTAAGACTxTGTCT...................................... 21 2 44.00 0.00 0.00 0.00 44.00 ............................................................................TGTCAACTGTAAGACTGTGTCT...................................... 22 1 88.00 4.00 19.00 0.00 65.00 ............................................................................TGTTAACTGTAAGACTGGGTCT...................................... 22 1 87.00 6.00 12.00 0.00 69.00 ............................................................................TGTTAACTGTTAGACTGTGTCT...................................... 22 1 87.00 2.00 3.00 0.00 82.00 ............................................................................TGTTAACTATAAGACTGTGTCT...................................... 22 1 81.00 3.00 12.00 0.00 66.00 ............................................................................TGTTAACTGTAAGACTGTATCT...................................... 22 1 81.00 3.00 16.00 0.00 62.00 ............................................................................TGTTAACTGTAAGACTGTGTCA...................................... 22 1 77.00 1.00 12.00 0.00 64.00 ............................................................................TGTTAACTGTAAGACTATGTCT...................................... 22 1 75.00 7.00 12.00 0.00 56.00 ............................................................................TGTTAACTGTAAGACTGTGTCTC..................................... 23 1 72.00 0.00 17.00 0.00 55.00 ............................................................................TGTTAACTGTCAGACTGTGTCT...................................... 22 1 72.00 7.00 23.00 0.00 42.00 ............................................................................TGTTAACTGTAAGATTGTGTCT...................................... 22 1 71.00 2.00 13.00 0.00 56.00 ............................................................................TGTTAACTGTAACACTGTGTCT...................................... 22 1 70.00 3.00 8.00 0.00 59.00 ............................................................................TGTTAACTGTACGACTGTGTCT...................................... 22 1 68.00 4.00 26.00 0.00 38.00 ......................................ACATAGTCATACGGTGAATGTT............................................................................ 22 1 67.00 0.00 23.00 0.00 44.00 ............................................................................TGTTAACTGTxAGACTGTGTCT...................................... 21 1 64.00 0.00 2.00 0.00 62.00 ............................................................................TGTTGACTGTGAGACTGTGTCT...................................... 22 1 64.00 0.00 3.00 0.00 61.00 ............................................................................TGTTCACTGTAAGACTGTGTCT...................................... 22 1 62.00 3.00 11.00 0.00 48.00 ................................................................................AACTGTAAGACTGTGTCT...................................... 18 1 62.00 3.00 3.00 0.00 56.00 ............................................................................TGTTAACTGTAAGACTCTGTCT...................................... 22 1 61.00 7.00 10.00 0.00 44.00 ............................................................................TGTTAACTGTAAGACTGTGTTT...................................... 22 1 61.00 8.00 17.00 0.00 36.00 ............................................................................TGTTAACTGTGATACTGTGTCT...................................... 22 1 58.00 0.00 1.00 0.00 57.00 ............................................................................TGTGAACTGTAAGACTGTGTCT...................................... 22 1 58.00 2.00 5.00 0.00 51.00 ............................................................................TGTTAACTGTATGACTGTGTCT...................................... 22 1 52.00 0.00 6.00 0.00 46.00 ............................................................................TATTAACTGTAAGACTGTGTCT...................................... 22 1 48.00 0.00 6.00 0.00 42.00 ...........................................................................ATGTTAACTGTGAGACTGTGTCT...................................... 23 1 47.00 0.00 3.00 0.00 44.00 ............................................................................TGTTAATTGTAAGACTGTGTCT...................................... 22 1 46.00 2.00 11.00 0.00 33.00 ............................................................................TGTTAACTGTAAAACTGTGTCT...................................... 22 1 46.00 4.00 6.00 0.00 36.00 ...........................................................................ATGTTAACTGTAAGACTGTGTC....................................... 22 1 43.00 0.00 8.00 0.00 35.00 ......................................ACATAGTCATACGGTGAATGTTG........................................................................... 23 1 42.00 0.00 6.00 0.00 36.00 ............................................................................TGTTAACTCTAAGACTGTGTCT...................................... 22 1 40.00 9.00 6.00 0.00 25.00 ............................................................................TGTTAACTGTAAGACTGTGTCTG..................................... 23 1 40.00 0.00 4.00 0.00 36.00 ............................................................................TGTTAACTGTGAGACTGTGTAT...................................... 22 1 39.00 0.00 0.00 0.00 39.00 ............................................................................TGTAAACTGTAAGACTGTGTCT...................................... 22 1 39.00 5.00 2.00 0.00 32.00 ...........................................................................ATGTTAACTGTAAGACTGTGT........................................ 21 1 39.00 1.00 1.00 0.00 37.00 ............................................................................TGTTAACTGTAAGACTGAGTCT...................................... 22 1 38.00 3.00 8.00 0.00 27.00 ............................................................................AGTTAACTGTAAGACTGTGTCT...................................... 22 1 35.00 3.00 1.00 0.00 31.00 ............................................................................TGTTAACTGTGAGACTGTGTC....................................... 21 1 34.00 0.00 3.00 0.00 31.00 ...............................................................................TAACTGTAAGACTGTGTCT...................................... 19 1 33.00 1.00 0.00 0.00 32.00 ............................................................................TGTTAACTGGAAGACTGTGTCT...................................... 22 1 33.00 4.00 17.00 0.00 12.00 ............................................................................TGTTACCTGTAAGACTGTGTCT...................................... 22 1 33.00 2.00 4.00 0.00 27.00 ............................................................................TGTTAACTGTAAGTCTGTGTCT...................................... 22 1 32.00 4.00 15.00 0.00 13.00 .............................................................................GTTAACTGTGAGACTGTGTCT...................................... 21 1 30.00 0.00 3.00 0.00 27.00 ............................................................................TGTTAACTGTAAGACTGTGTCTTT.................................... 24 1 29.00 0.00 2.00 0.00 27.00 ............................................................................GGTTAACTGTAAGACTGTGTCT...................................... 22 1 28.00 0.00 1.00 0.00 27.00 ............................................................................TGTTAACTTTGAGACTGTGTCT...................................... 22 1 28.00 0.00 3.00 0.00 25.00 ............................................................................TTTTAACTGTGAGACTGTGTCT...................................... 22 1 27.00 0.00 0.00 0.00 27.00 ............................................................................TGTTAACTGTAATACTTTGTCT...................................... 22 1 26.00 9.00 9.00 0.00 8.00 ......................................ACATAGTCATACGGTGAATGT............................................................................. 21 1 25.00 0.00 2.00 0.00 23.00 ............................................................................TGTTAACTGTAAGACTGTGTGT...................................... 22 1 25.00 0.00 7.00 0.00 18.00 ............................................................................TGTTAACTGTAAGACTGTGGCT...................................... 22 1 25.00 7.00 7.00 0.00 11.00 ............................................................................TGTTAACTGTGAGACTTTGTCT...................................... 22 1 25.00 0.00 1.00 0.00 24.00 ............................................................................TGTTAACTGTAAGACTGTG......................................... 19 1 24.00 0.00 3.00 0.00 21.00 ............................................................................TGTTAACTGTGAGAATGTGTCT...................................... 22 1 23.00 0.00 3.00 0.00 20.00 ............................................................................TGTTAACTGTGAGACTGTCT........................................ 20 1 22.00 0.00 0.00 0.00 22.00 ............................................................................TGTTAACTGCGAGACTGTGTCT...................................... 22 1 22.00 0.00 3.00 0.00 19.00 ............................................................................TGGTAACTGGAAGACTGTGTCT...................................... 22 1 22.00 1.00 21.00 0.00 0.00 ............................................................................TGTTTACTGTAAGACTGTGTCT...................................... 22 1 21.00 2.00 6.00 0.00 13.00 ............................................................................TGTTAACTGTGAGACTGTTTCT...................................... 22 1 21.00 0.00 2.00 0.00 19.00 ...........................................................................ATGTTAACTGTAAGACTGTGTCC...................................... 23 1 20.00 0.00 0.00 0.00 20.00 ............................................................................TGTTATCTGTAAGACTGTGTCT...................................... 22 1 19.00 1.00 6.00 0.00 12.00 ...........................................................................ATGTTAACTGTAATACTGTGTCT...................................... 23 1 18.00 2.00 0.00 0.00 16.00 ............................................................................TGTTAACTGTAAGACTGTGACT...................................... 22 1 18.00 1.00 4.00 0.00 13.00
121	scaffold_4784:3375650-3375670 -	6.77	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA ATTTACCACAAAGAGAAGAGT------------------------------------------------------------------------------------------------------------------ Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head		None
98	scaffold_4644:1453252-1453253 -	1.5	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA AA------------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head	None	None
129	scaffold_4784:13366720-13366720 -	0.75	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA ---G----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head	None	None

droFic1 - 9 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
68	scf7180000454106:760371-760511 -	81.62	GAT-GAACGGAGA----AGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA-CAGCCCAGTATCAA AGTAGAAAGGAGAGAGGAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCATCAACAATGGCCCAGCATTAG Size Hit Count Total Norm
69	scf7180000454106:760385-760520 -	42.78	GATG----------AACGGAGA----AGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA AATGGAAAAAGTAGAAAGGAGAGAGGAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCATCAACA-------------A Size Hit Count Total Norm
75	scf7180000454177:16578-16581 -	1.5	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA AACG----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
3	scf7180000452685:580-580 +	0.75	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA ---G----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
4	scf7180000452685:625-625 +	0.75	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA ---G----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
25	scf7180000454157:33482-33482 +	0.75	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA ---G----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
26	scf7180000454157:33530-33531 +	0.75	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA AA------------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
1	scf7180000452681:536-536 +	0.75	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA ---G----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
2	scf7180000452685:556-556 +	0.75	GATGAACGGAGAAGAAAGGATGCCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACACAGCCCAGTATCAA ---G----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None