dme-mir-998- Best orthologs

dme-mir-998	chr3R:17447601-17447743 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intron

Legend:

   mature strand at position 17447624-17447644
   star strand at position 17447699-17447720
   mutations
   read mismatches

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Species	Coordinate	Source	Confidence	Alignment
dm3	chr3R:17447586-17447758 -		1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCAAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droSim1	chr3R:4023089-4023261 +	LASTZ	1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droSec1	super_6:4044375-4044547 +	LASTZ	1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droYak2	chr3R:6285151-6285323 -	LASTZ	1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATATCTCG
droEre2	scaffold_4770:4217706-4217878 +	LASTZ	1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droEug1	scf7180000409760:941986-942163 +	LASTZ	4	CA-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGACAACAACACTG--ACC-GCT------------------CCC-GG---GGCCAAT--TGTTAAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACCAA------CATCTCTCG
droBia1	scf7180000302402:5912490-5912662 -	LASTZ	4	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAC-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droTak1	scf7180000415711:238684-238856 +	LASTZ	4	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droEle1	scf7180000491104:156569-156741 -	LASTZ	4	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droRho1	scf7180000762316:6979-7151 -	LASTZ	4	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droFic1	scf7180000454096:748472-748644 -	LASTZ	4	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droKik1	scf7180000302706:728210-728403 +	LASTZ	4	CT-------------------------------------------------------CGTCA-------------------GCAAATTCGT-TCGT-C--CTCTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAACTG-CAACAACACTG--ACC-GCT------------------TCCGGG---GGCCAAT--TGTTCATATTTGAGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAAACATGCATCCACC-AAAACAACATCTCTCG
droAna3	scaffold_13340:5676182-5676384 +	LASTZ	1	CT-------------------------------------------------------CGTCA-------------------GCAA-T----CTCGT-CTCCTCTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACCTGCTGCTGCTGCTGCTCT----CC--AGTTTGGCCAATTTTGTTAAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACC-AAAA--ACATCTCTCG
droBip1	scf7180000396708:3137665-3137842 -	LASTZ	4	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTCT----CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
dp4	chr2:23856839-23857018 -	LASTZ	1	CT-------------------------------------------------------CGTCT-------------------GAAA-TATATATCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droPer1	super_3:6633404-6633583 -	LASTZ	1	CT-------------------------------------------------------CGTCT-------------------GAAA-TATATATCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droWil1	scaffold_181089:8480191-8480341 +	LASTZ	1	--------------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT--GG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAT-CA------CA-------
droVir3	scaffold_13047:6339512-6339744 +	LASTZ	1	CTTTATGTCGATGTTTTTTCGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAT-A---------------------AA-------TGGAAA----CCATTTGCTCGCAACGCGCAAGCG-CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACTAA--------------G
droMoj3	scaffold_6540:1739242-1739414 -	LASTZ	1	CA-------------------------------------------------------AAT-A-------------------TCAA-------TGGATA----CCATT------------------AAAAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTGTAACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCAA-ACATGCATTCACCAA------AAAATGAAA
droGri2	scaffold_14906:11660076-11660280 +	LASTZ	1	CTTTATGTTGCTC------------------------------------------------AAATGGGACCATTCTGTATATCAA-------T---------CCAAT------CAACGCGCAAGCG-CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-CAAATC---AAATCA-A

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species	Alignment
dm3	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCAAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droSim1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droSec1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droYak2	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATATCTCG
droEre2	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droEug1	CA-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGACAACAACACTG--ACC-GCT------------------CCC-GG---GGCCAAT--TGTTAAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACCAA------CATCTCTCG
droBia1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAC-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droTak1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droEle1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droRho1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droFic1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droKik1	CT-------------------------------------------------------CGTCA-------------------GCAAATTCGT-TCGT-C--CTCTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAACTG-CAACAACACTG--ACC-GCT------------------TCCGGG---GGCCAAT--TGTTCATATTTGAGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAAACATGCATCCACC-AAAACAACATCTCTCG
droAna3	CT-------------------------------------------------------CGTCA-------------------GCAA-T----CTCGT-CTCCTCTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACCTGCTGCTGCTGCTGCTCT----CC--AGTTTGGCCAATTTTGTTAAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACC-AAAA--ACATCTCTCG
droBip1	CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTCT----CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
dp4	CT-------------------------------------------------------CGTCT-------------------GAAA-TATATATCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droPer1	CT-------------------------------------------------------CGTCT-------------------GAAA-TATATATCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG
droWil1	--------------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT--GG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAT-CA------CA-------
droVir3	CTTTATGTCGATGTTTTTTCGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAT-A---------------------AA-------TGGAAA----CCATTTGCTCGCAACGCGCAAGCG-CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACTAA--------------G
droMoj3	CA-------------------------------------------------------AAT-A-------------------TCAA-------TGGATA----CCATT------------------AAAAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTGTAACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCAA-ACATGCATTCACCAA------AAAATGAAA
droGri2	CTTTATGTTGCTC------------------------------------------------AAATGGGACCATTCTGTATATCAA-------T---------CCAAT------CAACGCGCAAGCG-CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-CAAATC---AAATCA-A

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species

Alignment

droSim1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	9200.00	13.50	6107.50	817.50	2261.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	2	2124.50	1938.00	111.50	7.00	68.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	2	791.50	17.50	623.50	55.00	95.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	2	791.50	0.50	735.50	45.00	10.50
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	2	547.00	0.00	501.00	37.50	8.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.........................................................................................................................................................	22	2	430.00	0.00	247.00	57.50	125.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	2	133.00	125.50	7.50	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.........................................................................................................................................................	22	2	127.00	0.50	115.50	9.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCC.............................................................................................................................................................	19	2	100.00	0.00	92.50	6.00	1.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	2	62.00	0.00	53.50	8.00	0.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T........................................................................................................................................................	23	2	61.00	0.00	51.00	6.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	2	58.50	57.00	0.50	0.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	2	42.00	39.00	3.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCG.............................................................................................................................................................	19	2	35.00	0.00	32.00	3.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C........................................................................................................................................................	23	2	30.50	0.00	22.50	2.00	6.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TT.......................................................................................................................................................	24	2	29.50	0.00	27.00	2.00	0.50
..............................................................................................................................................ACTGAATTCTCGTGGGGCTGCA-.........................................................................................................................................................	22	2	24.50	0.00	18.50	1.50	4.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGG...........................................................................................................................................................	21	2	24.50	0.00	18.50	2.00	4.00
..............................................................................................................................................ACTGAATTCTCGTGGGCCTGCA-.........................................................................................................................................................	22	2	18.50	0.00	14.00	0.50	4.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.........................................................................................................................................................	22	2	16.00	0.00	14.50	0.50	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	2	15.50	13.50	0.00	0.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTT..............................................................................................................................................................	18	2	15.00	0.00	14.00	1.00	0.00
..............................................................................................................................................ACTAAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	14.50	0.00	10.00	0.50	4.00
..............................................................................................................................................GCTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	13.00	0.00	9.50	1.50	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGATT.............................................................................................................................................................	19	2	12.00	0.00	11.50	0.50	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	2	11.50	0.00	11.00	0.50	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGACTGCA-.........................................................................................................................................................	22	2	10.50	0.00	6.00	1.00	3.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	2	10.00	8.50	1.00	0.00	0.50
..............................................................................................................................................ACTGAATTCTCGGGGGTCTGCA-.........................................................................................................................................................	22	2	9.50	0.00	3.50	1.00	5.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TA.......................................................................................................................................................	24	2	9.00	0.00	6.50	2.00	0.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	2	9.00	8.50	0.50	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	2	8.50	8.50	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTxGGTCTGCA-.........................................................................................................................................................	21	2	8.50	0.00	5.50	0.00	3.00
..............................................................................................................................................ACTGAATTCTCGCGGGTCTGCA-.........................................................................................................................................................	22	2	8.50	0.00	2.50	2.50	3.50
.................................................................................................................................................GAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	19	2	8.50	0.00	5.50	2.50	0.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	2	8.00	8.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T........................................................................................................................................................	23	2	7.50	0.00	7.00	0.50	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	2	7.50	5.50	2.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	2	7.00	7.00	0.00	0.00	0.00
..............................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................	18	2	7.00	0.00	3.00	0.50	3.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A........................................................................................................................................................	23	2	7.00	0.00	5.00	1.00	1.00
..............................................................................................................................................ACTGAATTCTCGTxGGTCTGC...........................................................................................................................................................	20	2	7.00	0.00	6.50	0.00	0.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGA...........................................................................................................................................................	21	2	6.50	0.00	6.50	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTxxGTCTGCA-.........................................................................................................................................................	20	2	6.50	0.00	5.00	0.50	1.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	2	6.00	6.00	0.00	0.00	0.00
...............................................................................................................................................CTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	21	2	5.50	0.00	3.00	0.50	2.00
..............................................................................................................................................ACTGAATTCTCGTGAGTCTGCA-.........................................................................................................................................................	22	2	5.50	0.00	4.50	0.50	0.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCCGCA-.........................................................................................................................................................	22	2	5.50	0.00	3.00	0.50	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	2	5.00	5.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCCCGTGGGTCTGCA-.........................................................................................................................................................	22	2	5.00	0.00	4.00	0.50	0.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATGCAGCTC..............................................	21	2	4.50	4.50	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCATGGGTCTGCA-.........................................................................................................................................................	22	2	4.50	0.00	4.50	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	2	4.50	4.50	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTTGTGGGTCTGCA-.........................................................................................................................................................	22	2	4.50	0.00	3.00	1.00	0.50
..............................................................................................................................................ACTGAATTCTCGTGGTTCTGCA-.........................................................................................................................................................	22	2	4.50	0.00	2.50	0.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	2	4.00	4.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	2	4.00	0.00	4.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGAC..............................................................................................................................................................	18	2	4.00	0.00	4.00	0.00	0.00
..............................................................................................................................................ACTGGATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	4.00	0.00	2.00	0.50	1.50
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	2	4.00	3.50	0.50	0.00	0.00
..............................................................................................................................................ACTGAGTTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	3.50	0.00	3.00	0.00	0.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGTA-.........................................................................................................................................................	22	2	3.50	0.00	2.50	0.00	1.00
..............................................................................................................................................ACTGAATTCTCGTTGGTCTGCA-.........................................................................................................................................................	22	2	3.50	0.50	2.00	0.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	2	3.50	1.00	1.00	0.00	1.50
..............................................................................................................................................ACTGAATTCTCGTGGGTTC.............................................................................................................................................................	19	2	3.50	0.00	3.50	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGCGTCTGCA-.........................................................................................................................................................	22	2	3.50	0.00	1.50	0.00	2.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	2	3.50	3.50	0.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	2	3.50	3.50	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGTGTCTGCA-.........................................................................................................................................................	22	2	3.50	0.00	3.50	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGCCTGC...........................................................................................................................................................	21	2	3.50	0.00	2.50	1.00	0.00
..............................................................................................................................................ACCGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	3.50	0.00	2.50	0.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGGCTGC...........................................................................................................................................................	21	2	3.50	0.00	3.50	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	2	3.50	2.00	1.50	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-A........................................................................................................................................................	23	2	3.50	0.00	3.00	0.50	0.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	2	3.50	3.50	0.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	2	3.50	3.50	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTTTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	3.00	0.00	2.50	0.00	0.50
..............................................................................................................................................ACTGAATTCTCGTGGTTCTGC...........................................................................................................................................................	21	2	3.00	0.00	1.00	0.50	1.50
..............................................................................................................................................ACTGAATTCTCGTGGGTCTAC...........................................................................................................................................................	21	2	3.00	0.00	2.50	0.50	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	2	3.00	3.00	0.00	0.00	0.00
..................................................................................................................................................AATTCTCGTGGGTCTGCA-.........................................................................................................................................................	18	2	3.00	0.00	2.50	0.00	0.50
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	2	3.00	2.50	0.00	0.00	0.50
..............................................................................................................................................ACTGAATTCTCGTTGGTCTGC...........................................................................................................................................................	21	2	3.00	0.00	2.50	0.00	0.50
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	2	3.00	0.00	0.50	0.00	2.50
..............................................................................................................................................ACTGAATTCTCGTGGCTCTGC...........................................................................................................................................................	21	2	3.00	0.00	2.00	0.50	0.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	2	3.00	3.00	0.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCTC..............................................	21	2	3.00	3.00	0.00	0.00	0.00
..............................................................................................................................................ATTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	3.00	0.00	3.00	0.00	0.00
.............................................................................................................................................CACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	23	2	2.50	0.00	1.50	1.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	2	2.50	0.00	2.00	0.50	0.00
..............................................................................................................................................ACTCAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	2	2.50	0.00	2.00	0.00	0.50
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	2	2.50	0.50	0.50	0.00	1.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGGTC..............................................	21	2	2.50	2.50	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGCGTCTGC...........................................................................................................................................................	21	2	2.50	0.00	2.50	0.00	0.00
..............................................................................................................................................ACTGAATTCTCTTGGGTC..............................................................................................................................................................	18	2	2.50	0.00	1.50	0.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTCCA-.........................................................................................................................................................	22	2	2.50	0.00	0.50	0.00	2.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	2	2.50	2.50	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-G........................................................................................................................................................	23	2	2.50	0.00	1.50	1.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-CT.......................................................................................................................................................	24	2	2.50	0.00	1.00	0.00	1.50
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	2	2.50	2.50	0.00	0.00	0.00
.....................................................................................................................................................................CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGC...................................................................................................	25	2	2.50	0.00	2.00	0.00	0.50

droSec1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	3	8166.00	486.67	3918.67	3760.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	3	872.67	93.33	223.33	556.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	3	369.67	10.00	43.67	316.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	3	313.00	53.67	75.00	184.33
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	3	288.67	67.00	33.67	188.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	3	142.00	4.67	50.67	86.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	3	68.00	13.33	37.33	17.33
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	3	61.33	14.33	0.67	46.33
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	3	60.67	0.00	0.67	60.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	3	35.67	2.00	23.00	10.67
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	3	31.67	0.33	0.00	31.33
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	3	29.00	1.00	0.67	27.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	3	26.67	1.67	14.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	3	24.00	0.67	5.33	18.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	3	17.00	0.00	14.67	2.33
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	3	16.67	0.33	14.33	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T........................................................................................................................................................	23	3	14.33	2.33	1.33	10.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	3	14.00	0.67	4.67	8.67
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	3	13.33	0.33	10.67	2.33
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	3	13.33	1.00	7.33	5.00
..............................................................................................................................................ACTGAATTCTCGTGGGTT..............................................................................................................................................................	18	3	13.33	0.00	0.00	13.33
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	3	13.00	3.00	0.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	3	12.67	1.67	7.67	3.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	3	12.33	0.33	5.00	7.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	3	11.33	5.33	1.67	4.33
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	3	11.00	0.67	8.33	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	3	10.67	0.67	7.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	3	10.67	0.00	1.00	9.67
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	3	10.33	0.00	1.00	9.33
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	3	10.00	0.33	6.67	3.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	3	10.00	0.00	5.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	3	10.00	0.33	5.33	4.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	3	10.00	0.33	5.33	4.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	3	9.67	2.00	7.00	0.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	3	9.33	0.67	3.67	5.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	3	9.33	0.33	3.67	5.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	3	9.33	0.67	5.33	3.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	3	8.67	0.67	5.00	3.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	3	8.67	0.00	4.00	4.67
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	3	8.33	1.00	2.67	4.67
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	3	7.33	0.33	4.33	2.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	3	7.33	2.00	3.33	2.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	3	7.00	0.67	2.33	4.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	3	6.33	0.00	1.67	4.67
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	3	6.00	0.00	1.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	3	6.00	0.33	2.33	3.33
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	3	6.00	0.00	4.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	3	6.00	0.00	3.33	2.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	3	5.67	0.33	2.67	2.67
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	3	5.67	0.33	1.00	4.33
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	3	5.67	0.00	2.00	3.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	3	5.67	0.00	0.00	5.67
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	3	5.33	0.00	3.33	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	3	5.33	0.00	0.00	5.33
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	3	5.00	0.00	0.33	4.67
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TT.......................................................................................................................................................	24	3	5.00	1.00	0.00	4.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	3	4.67	0.33	2.67	1.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATACAGCTC..............................................	21	3	4.00	0.00	3.67	0.33
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGA...........................................................................................................................................................	21	3	4.00	2.00	0.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	3	4.00	0.67	1.00	2.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	3	4.00	0.00	1.33	2.67
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	3	4.00	0.33	3.33	0.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAC..............................................	21	3	4.00	0.00	0.33	3.67
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	3	3.67	0.33	2.00	1.33
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.........................................................................................................................................................	22	3	3.67	0.67	0.33	2.67
...........................................................................................................................................................................................................................................................TAGCTCCATGAGATTCAGCTC..............................................	21	3	3.33	0.00	3.33	0.00
...........................................................................................................................................................................................................................................................TAGCACCAAGAGATTCAGCTC..............................................	21	3	3.33	0.00	1.33	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	3	3.00	0.33	1.00	1.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	3	3.00	0.00	2.67	0.33
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCT...............................................	20	3	2.67	0.33	0.00	2.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGGTC..............................................	21	3	2.67	2.33	0.00	0.33
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	3	2.67	0.00	0.67	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................	23	3	2.67	0.67	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAATCAGCTC..............................................	21	3	2.67	0.00	2.33	0.33
...........................................................................................................................................................................................................................................................TAGCCCCATGAGATTCAGCTC..............................................	21	3	2.33	0.33	1.67	0.33
.............................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................	19	3	2.33	0.00	2.00	0.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCT...............................................	20	3	2.33	0.67	1.00	0.67
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	3	2.33	1.00	0.67	0.67
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A........................................................................................................................................................	23	3	2.33	0.00	0.00	2.33
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCT...............................................	20	3	2.33	0.67	0.00	1.67
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCT...............................................	20	3	2.33	0.00	0.67	1.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCT...............................................	20	3	2.33	0.33	0.67	1.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGAxTCAGCTC..............................................	20	3	2.33	0.00	2.33	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGATT.............................................................................................................................................................	19	3	2.00	0.00	0.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTGAGCTC..............................................	21	3	2.00	0.00	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAAATTCAGCTC..............................................	21	3	2.00	0.00	0.33	1.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	3	2.00	0.00	1.33	0.67
.............................................................................................................................................................................................................................................................TCACCATGAGATTCAGCTC..............................................	19	3	2.00	0.00	1.67	0.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTC.................................................	18	3	2.00	0.00	0.67	1.33
...........................................................................................................................................................................................................................................................TAGCACCATGTGATTCAGCTC..............................................	21	3	2.00	0.00	1.67	0.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCCA............................................	23	3	2.00	0.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................	24	3	1.67	0.00	0.00	1.67
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCT...............................................	20	3	1.67	0.00	1.00	0.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAT.............................................	22	3	1.67	0.00	0.00	1.67
...........................................................................................................................................................................................................................................................TTGCACCATGAGATTCAGCTC..............................................	21	3	1.67	0.00	1.33	0.33
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCTC................................................	19	3	1.67	0.00	0.67	1.00
............................................................................................................................................................................................................................................................TACACCATGAGATTCAGCTC..............................................	20	3	1.67	0.00	0.00	1.67
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTxAGCTC..............................................	20	3	1.67	0.00	1.67	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCT...............................................	20	3	1.67	0.67	0.00	1.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCT...............................................	20	3	1.67	0.00	0.00	1.67
...........................................................................................................................................................................................................................................................TAGCACCAGGAGATTCAGCTC..............................................	21	3	1.33	0.00	1.00	0.33

droYak2

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATATCTCG	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	14002.00	3320.00	3232.00	800.00	6598.00	52.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	3355.00	34.00	13.00	33.00	49.00	3226.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	1401.00	163.00	380.00	177.00	677.00	4.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	1301.00	0.00	108.00	0.00	251.00	942.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	738.00	1.00	29.00	1.00	44.00	663.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	652.00	203.00	135.00	33.00	277.00	4.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	515.00	30.00	64.00	64.00	184.00	173.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	345.00	72.00	70.00	40.00	163.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	328.00	93.00	62.00	61.00	111.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.........................................................................................................................................................	22	1	138.00	0.00	0.00	0.00	1.00	137.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	126.00	14.00	10.00	7.00	95.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCC.............................................................................................................................................................	19	1	124.00	0.00	1.00	0.00	4.00	119.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	96.00	5.00	14.00	0.00	77.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	86.00	7.00	9.00	0.00	70.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	85.00	1.00	6.00	33.00	34.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	56.00	10.00	7.00	1.00	38.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	53.00	14.00	11.00	3.00	25.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	51.00	15.00	11.00	2.00	23.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTT..............................................................................................................................................................	18	1	47.00	0.00	6.00	0.00	31.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	35.00	3.00	12.00	1.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	34.00	10.00	5.00	0.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGC..............................................	21	1	34.00	4.00	5.00	0.00	25.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	32.00	7.00	2.00	0.00	23.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	30.00	5.00	4.00	1.00	20.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	29.00	2.00	9.00	2.00	16.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	27.00	4.00	8.00	0.00	15.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	1	25.00	2.00	4.00	0.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	25.00	5.00	4.00	1.00	15.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	24.00	3.00	4.00	1.00	16.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	24.00	4.00	6.00	4.00	10.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCG.............................................................................................................................................................	19	1	24.00	0.00	1.00	0.00	0.00	23.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTT..............................................	21	1	24.00	2.00	8.00	0.00	14.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTTC...........................................................................................................................................................	21	1	23.00	0.00	9.00	0.00	14.00	0.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	23.00	2.00	2.00	3.00	16.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T........................................................................................................................................................	23	1	22.00	0.00	0.00	3.00	1.00	18.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	22.00	4.00	2.00	0.00	16.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	21.00	7.00	4.00	1.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	21.00	2.00	3.00	0.00	16.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	21.00	5.00	8.00	3.00	5.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.........................................................................................................................................................	22	1	21.00	0.00	1.00	0.00	1.00	19.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	20.00	5.00	3.00	0.00	12.00	0.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	19.00	1.00	9.00	0.00	9.00	0.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	19.00	2.00	4.00	1.00	12.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	1	18.00	0.00	4.00	3.00	10.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCTC..............................................	21	1	18.00	0.00	4.00	0.00	14.00	0.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	1	18.00	1.00	5.00	0.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	17.00	3.00	11.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCT...............................................	20	1	16.00	1.00	3.00	0.00	12.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCA.............................................................................................................................................................	19	1	16.00	0.00	0.00	0.00	4.00	12.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	16.00	3.00	2.00	0.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	16.00	1.00	0.00	1.00	14.00	0.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	16.00	2.00	6.00	0.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	15.00	1.00	4.00	1.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	15.00	1.00	6.00	0.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	15.00	4.00	4.00	0.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	14.00	1.00	6.00	1.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	14.00	0.00	5.00	0.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCT...............................................	20	1	14.00	1.00	2.00	0.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATGCAGCTC..............................................	21	1	14.00	2.00	2.00	0.00	10.00	0.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	14.00	0.00	5.00	4.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	14.00	2.00	0.00	2.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCT...............................................	20	1	14.00	1.00	0.00	1.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	1	13.00	1.00	6.00	1.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	13.00	4.00	0.00	1.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	12.00	1.00	1.00	0.00	10.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGAC..............................................................................................................................................................	18	1	12.00	0.00	0.00	0.00	2.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCAGGAGATTCAGCTC..............................................	21	1	11.00	2.00	0.00	0.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	11.00	0.00	2.00	0.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	10.00	0.00	2.00	1.00	6.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGTTTCAGCTC..............................................	21	1	10.00	1.00	1.00	0.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCTTGAGATTCAGCTC..............................................	21	1	10.00	2.00	2.00	0.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCCCCATGAGATTCAGCTC..............................................	21	1	10.00	2.00	4.00	0.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	10.00	4.00	1.00	0.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	1	10.00	2.00	2.00	0.00	6.00	0.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	9.00	2.00	2.00	0.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGGTC..............................................	21	1	9.00	4.00	2.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	1	9.00	2.00	3.00	0.00	4.00	0.00
..............................................................................................................................................ACTGAATTCTCGTTGGTC..............................................................................................................................................................	18	1	9.00	0.00	2.00	0.00	3.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCTGCTC..............................................	21	1	9.00	1.00	0.00	0.00	8.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	1	9.00	0.00	3.00	1.00	4.00	1.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	9.00	1.00	1.00	1.00	5.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	9.00	2.00	3.00	0.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGTGATTCAGCTC..............................................	21	1	9.00	0.00	0.00	0.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAAATTCAGCTC..............................................	21	1	8.00	1.00	5.00	0.00	2.00	0.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	1	8.00	2.00	2.00	1.00	3.00	0.00
..............................................................................................................................................ACTAAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	8.00	1.00	0.00	0.00	0.00	7.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGG...........................................................................................................................................................	21	1	8.00	1.00	2.00	0.00	2.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGCTTCAGCTC..............................................	21	1	8.00	2.00	0.00	0.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAATCAGCTC..............................................	21	1	8.00	0.00	3.00	1.00	4.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCC-.........................................................................................................................................................	22	1	7.00	0.00	1.00	0.00	3.00	3.00
..............................................................................................................................................ACTGAATTCTCGTGGTTCTGC...........................................................................................................................................................	21	1	7.00	0.00	1.00	1.00	3.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTA............................................	23	1	7.00	1.00	2.00	1.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGGTTCAGCTC..............................................	21	1	7.00	0.00	2.00	0.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	7.00	1.00	0.00	0.00	6.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTA..............................................................................................................................................................	18	1	7.00	0.00	4.00	0.00	2.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGCC..............................................................................................................................................................	18	1	7.00	0.00	0.00	0.00	4.00	3.00
..............................................................................................................................................ACTGAATTCTCGTGTGTC..............................................................................................................................................................	18	1	7.00	0.00	3.00	0.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACGATGAGATTCAGCTC..............................................	21	1	6.00	0.00	0.00	1.00	5.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-C........................................................................................................................................................	23	1	6.00	0.00	0.00	0.00	0.00	6.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCTC..............................................	21	1	6.00	0.00	0.00	0.00	6.00	0.00
...........................................................................................................................................................................................................................................................TTGCACCATGAGATTCAGCTC..............................................	21	1	6.00	0.00	2.00	0.00	4.00	0.00

droEre2

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	22375.00	1652.00	2259.00	0.00	18464.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	3102.00	102.00	262.00	0.00	2738.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	1763.00	0.00	32.00	0.00	1731.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	1257.00	55.00	87.00	0.00	1115.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	677.00	6.00	83.00	0.00	588.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	648.00	30.00	61.00	0.00	557.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	415.00	0.00	15.00	0.00	400.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	388.00	13.00	32.00	0.00	343.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	349.00	1.00	39.00	0.00	309.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	255.00	35.00	35.00	0.00	185.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	226.00	1.00	18.00	0.00	207.00
..............................................................................................................................................ACTGAATTCTCGTGGGTT..............................................................................................................................................................	18	1	205.00	0.00	2.00	0.00	203.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	1	179.00	7.00	2.00	0.00	170.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	163.00	6.00	0.00	0.00	157.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	154.00	12.00	9.00	0.00	133.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	148.00	3.00	2.00	0.00	143.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	1	145.00	0.00	3.00	0.00	142.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	133.00	1.00	6.00	0.00	126.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	131.00	4.00	3.00	0.00	124.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	117.00	9.00	1.00	0.00	107.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	102.00	3.00	4.00	0.00	95.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	93.00	32.00	12.00	0.00	49.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	85.00	2.00	3.00	0.00	80.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	1	56.00	0.00	2.00	0.00	54.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	56.00	1.00	3.00	0.00	52.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	51.00	1.00	6.00	0.00	44.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	50.00	7.00	0.00	0.00	43.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	44.00	10.00	13.00	0.00	21.00
..............................................................................................................................................ACTGAATTCTCGTTGGTC..............................................................................................................................................................	18	1	42.00	0.00	0.00	0.00	42.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	41.00	9.00	3.00	0.00	29.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	38.00	1.00	3.00	0.00	34.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	32.00	6.00	2.00	0.00	24.00
..............................................................................................................................................ACTGAATTCTCGTGGGTA..............................................................................................................................................................	18	1	31.00	0.00	0.00	0.00	31.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	31.00	1.00	4.00	0.00	26.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	30.00	3.00	3.00	0.00	24.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCT...............................................	20	1	30.00	0.00	0.00	0.00	30.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	30.00	4.00	5.00	0.00	21.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCT...............................................	20	1	29.00	0.00	0.00	0.00	29.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	28.00	8.00	2.00	0.00	18.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCG.............................................................................................................................................................	19	1	28.00	0.00	1.00	0.00	27.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	28.00	3.00	5.00	0.00	20.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	28.00	6.00	3.00	0.00	19.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	26.00	1.00	5.00	0.00	20.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCT...............................................	20	1	26.00	0.00	1.00	0.00	25.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	25.00	3.00	1.00	0.00	21.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	24.00	3.00	3.00	0.00	18.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	23.00	5.00	3.00	0.00	15.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	23.00	4.00	1.00	0.00	18.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	23.00	2.00	1.00	0.00	20.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	1	23.00	0.00	5.00	0.00	18.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCA.............................................................................................................................................................	19	1	21.00	0.00	2.00	0.00	19.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	21.00	0.00	2.00	0.00	19.00
..............................................................................................................................................ACTGAATTCTCGTGTGTC..............................................................................................................................................................	18	1	21.00	0.00	0.00	0.00	21.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	20.00	4.00	6.00	0.00	10.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	19.00	8.00	1.00	0.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	19.00	1.00	3.00	0.00	15.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCT...............................................	20	1	19.00	0.00	0.00	0.00	19.00
..............................................................................................................................................ACTGAATTCTCGTTGGTCTG............................................................................................................................................................	20	1	18.00	0.00	0.00	0.00	18.00
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	1	18.00	0.00	3.00	0.00	15.00
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	1	17.00	1.00	5.00	0.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	17.00	0.00	1.00	0.00	16.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	17.00	5.00	3.00	0.00	9.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	16.00	4.00	2.00	0.00	10.00
..............................................................................................................................................ACTGAATTCTCGTTGGTCTGC...........................................................................................................................................................	21	1	16.00	0.00	0.00	0.00	16.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCT...............................................	20	1	16.00	0.00	0.00	0.00	16.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	16.00	0.00	2.00	0.00	14.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	15.00	2.00	3.00	0.00	10.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCT...............................................	20	1	14.00	0.00	0.00	0.00	14.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	14.00	1.00	1.00	0.00	12.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	14.00	2.00	1.00	0.00	11.00
..............................................................................................................................................ACTGAATTCTCTTGGGTC..............................................................................................................................................................	18	1	13.00	0.00	0.00	0.00	13.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGAT...............................................	20	1	13.00	0.00	0.00	0.00	13.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	12.00	2.00	8.00	0.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T........................................................................................................................................................	23	1	12.00	0.00	0.00	0.00	12.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTTC...........................................................................................................................................................	21	1	12.00	3.00	3.00	0.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	12.00	1.00	3.00	0.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCT...............................................	20	1	12.00	0.00	0.00	0.00	12.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTCT.............................................	22	1	11.00	0.00	0.00	0.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTCT.............................................	22	1	11.00	1.00	0.00	0.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	11.00	3.00	2.00	0.00	6.00
..............................................................................................................................................ACTGAATTCTAGTGGGTC..............................................................................................................................................................	18	1	11.00	0.00	0.00	0.00	11.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	11.00	2.00	1.00	0.00	8.00
..............................................................................................................................................ACTTAATTCTCGTGGGTC..............................................................................................................................................................	18	1	11.00	0.00	0.00	0.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTCT.............................................	22	1	11.00	1.00	0.00	0.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	11.00	3.00	3.00	0.00	5.00
..............................................................................................................................................ACTGAATTCTCGTTGGTCTGCA-.........................................................................................................................................................	22	1	10.00	0.00	0.00	0.00	10.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTTT............................................................................................................................................................	20	1	10.00	0.00	0.00	0.00	10.00
...........................................................................................................................................................................................................................................................TAGGACCATGAGATTCAGCTC..............................................	21	1	10.00	0.00	0.00	0.00	10.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCC.............................................................................................................................................................	19	1	10.00	0.00	2.00	0.00	8.00
..............................................................................................................................................ACTGAATTATCGTGGGTC..............................................................................................................................................................	18	1	10.00	0.00	0.00	0.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	1	9.00	1.00	0.00	0.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTCA.............................................	22	1	9.00	1.00	0.00	0.00	8.00
..............................................................................................................................................ACTGAATTCTAGTGGGTCTGC...........................................................................................................................................................	21	1	9.00	0.00	0.00	0.00	9.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	1	9.00	0.00	1.00	0.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................	22	1	8.00	0.00	0.00	0.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAAATTCAGCTC..............................................	21	1	8.00	0.00	2.00	0.00	6.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTG.............................................................................................................................................................	19	1	8.00	0.00	1.00	0.00	7.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATACAGCTC..............................................	21	1	7.00	1.00	0.00	0.00	6.00
..............................................................................................................................................ACTGAATTCTCGTGGTTCTGC...........................................................................................................................................................	21	1	7.00	0.00	1.00	0.00	6.00
..............................................................................................................................................................................................................................................................CACCATGAGATTCAGCTC..............................................	18	1	7.00	1.00	0.00	0.00	6.00
.............................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................	19	1	7.00	1.00	0.00	0.00	6.00

droEug1

CA-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGACAACAACACTG--ACC-GCT------------------CCC-GG---GGCCAAT--TGTTAAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACCAA------CATCTCTCG

Size

Hit Count

Total Norm

droBia1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAC-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG

Size

Hit Count

Total Norm

droTak1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG

Size

Hit Count

Total Norm

droEle1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG

Size

Hit Count

Total Norm

droRho1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG

Size

Hit Count

Total Norm

droFic1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT------------------CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG

Size

Hit Count

Total Norm

droKik1

CT-------------------------------------------------------CGTCA-------------------GCAAATTCGT-TCGT-C--CTCTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCAACTG-CAACAACACTG--ACC-GCT------------------TCCGGG---GGCCAAT--TGTTCATATTTGAGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAAACATGCATCCACC-AAAACAACATCTCTCG

Size

Hit Count

Total Norm

droAna3

CT-------------------------------------------------------CGTCA-------------------GCAA-T----CTCGT-CTCCTCTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACCTGCTGCTGCTGCTGCTCT----CC--AGTTTGGCCAATTTTGTTAAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACC-AAAA--ACATCTCTCG	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	14783.00	904.00	9275.00	3609.00	995.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	1930.00	145.00	1271.00	382.00	132.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	1833.00	28.00	1553.00	216.00	36.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	672.00	1.00	462.00	209.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	654.00	15.00	437.00	106.00	96.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	571.00	86.00	305.00	170.00	10.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	269.00	12.00	244.00	7.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	237.00	50.00	88.00	78.00	21.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	159.00	28.00	92.00	38.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	1	155.00	14.00	121.00	20.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTT..............................................................................................................................................................	18	1	153.00	0.00	136.00	17.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	144.00	12.00	106.00	9.00	17.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	142.00	7.00	113.00	10.00	12.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	126.00	22.00	78.00	24.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	102.00	7.00	84.00	11.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	101.00	35.00	31.00	35.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	66.00	0.00	42.00	16.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	1	55.00	2.00	47.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	52.00	3.00	28.00	20.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	1	52.00	6.00	41.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	51.00	2.00	35.00	14.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	45.00	2.00	25.00	17.00	1.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTCT.............................................	22	1	45.00	1.00	44.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	44.00	1.00	28.00	13.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	42.00	3.00	26.00	12.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	38.00	3.00	6.00	23.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	36.00	1.00	2.00	33.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	35.00	3.00	26.00	4.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	35.00	13.00	19.00	2.00	1.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCT...............................................	20	1	34.00	2.00	29.00	1.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	34.00	5.00	19.00	7.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	31.00	3.00	14.00	14.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	30.00	2.00	12.00	14.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	28.00	5.00	4.00	13.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCT...............................................	20	1	27.00	2.00	24.00	0.00	1.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	26.00	2.00	11.00	10.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	25.00	0.00	5.00	14.00	6.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	1	24.00	1.00	3.00	18.00	2.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	24.00	2.00	11.00	6.00	5.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	1	24.00	10.00	12.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	23.00	0.00	6.00	10.00	7.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	23.00	2.00	11.00	7.00	3.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	23.00	3.00	13.00	5.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	22.00	1.00	15.00	5.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	21.00	0.00	1.00	13.00	7.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGAT...............................................	20	1	20.00	0.00	18.00	1.00	1.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	20.00	0.00	6.00	12.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	20.00	1.00	9.00	7.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................	24	1	19.00	0.00	15.00	3.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	19.00	1.00	3.00	11.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTCT.............................................	22	1	18.00	1.00	17.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGC..............................................	21	1	18.00	0.00	1.00	17.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	17.00	0.00	10.00	5.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	17.00	1.00	7.00	8.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAT.............................................	22	1	16.00	1.00	15.00	0.00	0.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCATCTC..............................................	21	1	16.00	1.00	15.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	16.00	0.00	7.00	5.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	16.00	1.00	5.00	8.00	2.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	16.00	0.00	2.00	14.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCTC..............................................	21	1	15.00	0.00	0.00	14.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	14.00	3.00	2.00	7.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	14.00	0.00	10.00	1.00	3.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	14.00	0.00	1.00	10.00	3.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	14.00	0.00	12.00	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	13.00	0.00	3.00	6.00	4.00
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	1	12.00	2.00	6.00	3.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCAGGAGATTCAGCTC..............................................	21	1	11.00	2.00	2.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	11.00	1.00	7.00	1.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	11.00	0.00	5.00	3.00	3.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	11.00	1.00	6.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCTC..............................................	21	1	11.00	0.00	1.00	10.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTG.............................................................................................................................................................	19	1	11.00	2.00	5.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTGAGCTC..............................................	21	1	11.00	2.00	3.00	5.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATCT.............................................	22	1	11.00	0.00	10.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCT...............................................	20	1	10.00	1.00	6.00	2.00	1.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	1	10.00	2.00	3.00	4.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTCT.............................................	22	1	10.00	1.00	7.00	1.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCA.............................................................................................................................................................	19	1	9.00	0.00	5.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG............................................	23	1	9.00	0.00	5.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTCA.............................................	22	1	9.00	0.00	6.00	1.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	9.00	0.00	0.00	8.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATA..............................................	21	1	8.00	0.00	8.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCT...............................................	20	1	8.00	1.00	7.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGTTTCAGCTC..............................................	21	1	8.00	0.00	0.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGTGATTCAGCTC..............................................	21	1	8.00	0.00	1.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTCT.............................................	22	1	8.00	0.00	5.00	3.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTTC...........................................................................................................................................................	21	1	8.00	0.00	3.00	4.00	1.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	8.00	0.00	4.00	3.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGTGTC..............................................................................................................................................................	18	1	8.00	0.00	5.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCT...............................................	20	1	7.00	4.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATGCAGCTC..............................................	21	1	7.00	0.00	0.00	7.00	0.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	7.00	0.00	1.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGGACCATGAGATTCAGCTC..............................................	21	1	7.00	0.00	2.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCT...............................................	20	1	7.00	1.00	4.00	0.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTTT............................................................................................................................................................	20	1	7.00	1.00	4.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCT...............................................	20	1	7.00	1.00	5.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCT...............................................	20	1	6.00	0.00	4.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTAA.............................................	22	1	6.00	0.00	5.00	0.00	1.00
...........................................................................................................................................................................................................................................................TTGCACCATGAGATTCAGCTC..............................................	21	1	6.00	0.00	4.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTG...........................................	24	1	6.00	0.00	6.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGATC..............................................	21	1	6.00	1.00	5.00	0.00	0.00

droBip1

CT-------------------------------------------------------CGTCA-------------------GCAA-------TCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTCT----CC--AG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG

Size

Hit Count

Total Norm

dp4

CT-------------------------------------------------------CGTCT-------------------GAAA-TATATATCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	9117.00	516.00	3679.00	4922.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	1098.00	91.00	191.00	816.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	536.00	84.00	29.00	412.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	189.00	5.00	76.00	108.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	176.00	14.00	2.00	126.00	34.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	163.00	22.00	4.00	137.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	110.00	8.00	58.00	25.00	19.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	101.00	2.00	55.00	44.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	100.00	5.00	32.00	63.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	59.00	1.00	3.00	55.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	53.00	0.00	33.00	20.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	36.00	0.00	25.00	11.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	1	34.00	8.00	1.00	25.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	31.00	0.00	25.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	27.00	0.00	16.00	11.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	25.00	0.00	1.00	23.00	1.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	25.00	0.00	19.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	23.00	0.00	11.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	20.00	0.00	10.00	10.00	0.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	20.00	0.00	3.00	17.00	0.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	17.00	0.00	4.00	13.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATGCAGCTC..............................................	21	1	17.00	0.00	6.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGC..............................................	21	1	16.00	0.00	7.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	16.00	0.00	6.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	16.00	0.00	8.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	16.00	0.00	3.00	13.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTTC...........................................................................................................................................................	21	1	15.00	0.00	1.00	14.00	0.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	15.00	0.00	3.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	15.00	1.00	6.00	8.00	0.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	15.00	1.00	12.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	15.00	0.00	9.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	14.00	0.00	4.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	14.00	0.00	1.00	13.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	14.00	0.00	7.00	7.00	0.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	14.00	1.00	8.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	13.00	0.00	10.00	3.00	0.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	13.00	0.00	3.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	12.00	0.00	2.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	12.00	0.00	8.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	11.00	2.00	0.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	11.00	2.00	2.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	11.00	0.00	4.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	11.00	0.00	5.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	10.00	0.00	6.00	4.00	0.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	10.00	0.00	7.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	10.00	0.00	4.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	10.00	2.00	4.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	10.00	0.00	4.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	9.00	0.00	5.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCTC..............................................	21	1	9.00	0.00	4.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	9.00	0.00	2.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAAATTCAGCTC..............................................	21	1	8.00	0.00	3.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGTGATTCAGCTC..............................................	21	1	8.00	0.00	5.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	8.00	0.00	4.00	4.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	1	8.00	1.00	0.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	7.00	0.00	4.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	7.00	1.00	3.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCT...............................................	20	1	6.00	1.00	3.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCTTGAGATTCAGCTC..............................................	21	1	6.00	0.00	3.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	6.00	0.00	1.00	5.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGCCTGC...........................................................................................................................................................	21	1	5.00	0.00	1.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCGC..............................................	21	1	5.00	0.00	3.00	2.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	1	5.00	1.00	0.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	4.00	0.00	3.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	1	4.00	0.00	1.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGTTTCAGCTC..............................................	21	1	4.00	0.00	3.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	1	4.00	0.00	2.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCCCCATGAGATTCAGCTC..............................................	21	1	4.00	0.00	3.00	1.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTTT............................................................................................................................................................	20	1	4.00	1.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCAGGAGATTCAGCTC..............................................	21	1	4.00	1.00	2.00	1.00	0.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	1	4.00	0.00	0.00	4.00	0.00
.............................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................	19	1	4.00	0.00	1.00	3.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.........................................................................................................................................................	22	1	4.00	1.00	1.00	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	1	4.00	0.00	4.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAC..............................................	21	1	4.00	0.00	3.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCTC..............................................	21	1	4.00	0.00	3.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCT...............................................	20	1	4.00	0.00	1.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCTGCTC..............................................	21	1	4.00	0.00	2.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCTCCATGAGATTCAGCTC..............................................	21	1	4.00	1.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGGTC..............................................	21	1	4.00	0.00	4.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	1	4.00	0.00	2.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCT...............................................	20	1	3.00	0.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCT...............................................	20	1	3.00	1.00	0.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAATCAGCTC..............................................	21	1	3.00	0.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	1	3.00	0.00	1.00	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGTTTCAGCTC..............................................	21	1	3.00	0.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	3.00	1.00	0.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	3.00	0.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCGC..............................................	21	1	3.00	0.00	2.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCT...............................................	20	1	3.00	0.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................	20	1	3.00	0.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	3.00	0.00	2.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCT...............................................	20	1	3.00	0.00	0.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGAGTCAGCTC..............................................	21	1	3.00	0.00	1.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	3.00	0.00	2.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCT...............................................	20	1	3.00	0.00	0.00	3.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGA...........................................................................................................................................................	21	1	3.00	0.00	1.00	2.00	0.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCT...............................................	20	1	3.00	0.00	1.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCT...............................................	20	1	3.00	0.00	1.00	2.00	0.00

droPer1

CT-------------------------------------------------------CGTCT-------------------GAAA-TATATATCGT-C----CTCGT------------------GTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-ATT------------------TCC-AG---GGCCAAT--TGTTAAT-TTTGCGATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-AA------CATCTCTCG	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	21586.00	169.00	855.00	6678.00	13854.00	30.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	3402.00	88.00	89.00	1031.00	2193.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	1133.00	130.00	7.00	360.00	591.00	45.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	612.00	9.00	9.00	9.00	20.00	565.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	397.00	4.00	24.00	112.00	257.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	349.00	3.00	13.00	120.00	213.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	348.00	25.00	0.00	73.00	230.00	20.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	261.00	57.00	0.00	110.00	93.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	180.00	5.00	2.00	45.00	128.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	137.00	0.00	2.00	18.00	117.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	110.00	0.00	3.00	17.00	90.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	101.00	1.00	3.00	48.00	49.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	88.00	0.00	0.00	15.00	66.00	7.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	78.00	0.00	5.00	20.00	53.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	78.00	0.00	2.00	12.00	64.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	62.00	0.00	1.00	8.00	53.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	60.00	0.00	2.00	11.00	47.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGC..............................................	21	1	53.00	0.00	0.00	4.00	49.00	0.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	53.00	0.00	2.00	13.00	38.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	52.00	0.00	0.00	4.00	48.00	0.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	1	51.00	1.00	0.00	6.00	44.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCTC..............................................	21	1	50.00	0.00	2.00	5.00	43.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	49.00	0.00	4.00	21.00	24.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	48.00	0.00	3.00	12.00	33.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCAGGAGATTCAGCTC..............................................	21	1	47.00	0.00	0.00	6.00	41.00	0.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	47.00	0.00	0.00	9.00	38.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	46.00	0.00	0.00	7.00	39.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	46.00	0.00	2.00	5.00	39.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	46.00	0.00	3.00	14.00	29.00	0.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCTC..............................................	21	1	45.00	0.00	0.00	24.00	21.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	45.00	1.00	5.00	7.00	32.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	1	45.00	6.00	0.00	15.00	24.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	44.00	0.00	1.00	8.00	35.00	0.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	44.00	0.00	2.00	9.00	33.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATGCAGCTC..............................................	21	1	44.00	0.00	0.00	6.00	38.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	39.00	1.00	0.00	9.00	29.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	39.00	0.00	2.00	8.00	29.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	37.00	0.00	2.00	12.00	23.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	36.00	0.00	0.00	11.00	25.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	36.00	0.00	0.00	6.00	30.00	0.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	35.00	0.00	2.00	7.00	26.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	35.00	0.00	2.00	6.00	27.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTTC...........................................................................................................................................................	21	1	34.00	0.00	0.00	6.00	28.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGTGATTCAGCTC..............................................	21	1	32.00	0.00	1.00	4.00	27.00	0.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	30.00	0.00	1.00	1.00	28.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	29.00	0.00	1.00	4.00	24.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	29.00	0.00	0.00	9.00	20.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	28.00	0.00	0.00	6.00	22.00	0.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	28.00	0.00	0.00	20.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	27.00	0.00	0.00	9.00	18.00	0.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	27.00	0.00	1.00	5.00	21.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	26.00	0.00	1.00	2.00	23.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	26.00	0.00	0.00	3.00	23.00	0.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	26.00	0.00	1.00	12.00	13.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.........................................................................................................................................................	22	1	25.00	0.00	0.00	0.00	0.00	25.00
...........................................................................................................................................................................................................................................................TAGCACCTTGAGATTCAGCTC..............................................	21	1	24.00	0.00	0.00	3.00	21.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCT...............................................	20	1	24.00	0.00	0.00	4.00	20.00	0.00
...........................................................................................................................................................................................................................................................TAGGACCATGAGATTCAGCTC..............................................	21	1	23.00	0.00	0.00	2.00	21.00	0.00
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	1	23.00	0.00	0.00	4.00	19.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	1	22.00	4.00	0.00	6.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	1	22.00	0.00	1.00	2.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACGATGAGATTCAGCTC..............................................	21	1	22.00	0.00	0.00	1.00	21.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	21.00	0.00	1.00	1.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	21.00	0.00	2.00	8.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGTTTCAGCTC..............................................	21	1	19.00	0.00	0.00	0.00	19.00	0.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	19.00	0.00	0.00	8.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	18.00	0.00	1.00	2.00	15.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	16.00	0.00	1.00	7.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGTTTCAGCTC..............................................	21	1	16.00	0.00	0.00	1.00	15.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCT...............................................	20	1	16.00	0.00	1.00	3.00	12.00	0.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	1	15.00	0.00	1.00	1.00	13.00	0.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	15.00	0.00	1.00	7.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTT..............................................	21	1	15.00	0.00	0.00	2.00	13.00	0.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	15.00	0.00	0.00	3.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCG...............................................	20	1	14.00	0.00	0.00	2.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCTGCTC..............................................	21	1	14.00	0.00	0.00	2.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCCCCATGAGATTCAGCTC..............................................	21	1	14.00	0.00	0.00	3.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCT...............................................	20	1	13.00	0.00	0.00	3.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCT...............................................	20	1	13.00	0.00	0.00	3.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCGC..............................................	21	1	13.00	0.00	0.00	2.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATACAGCTC..............................................	21	1	12.00	0.00	1.00	5.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGGTC..............................................	21	1	12.00	0.00	0.00	0.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	11.00	0.00	0.00	0.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAATCAGCTC..............................................	21	1	11.00	0.00	0.00	4.00	7.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGCCTGC...........................................................................................................................................................	21	1	11.00	0.00	0.00	1.00	8.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	11.00	0.00	0.00	2.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	11.00	1.00	1.00	1.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAC..............................................	21	1	11.00	0.00	1.00	2.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	1	11.00	0.00	0.00	2.00	9.00	0.00
...........................................................................................................................................................................................................................................................TTGCACCATGAGATTCAGCTC..............................................	21	1	11.00	1.00	0.00	0.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGATC..............................................	21	1	11.00	0.00	0.00	2.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAAATTCAGCTC..............................................	21	1	10.00	0.00	0.00	3.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCT...............................................	20	1	10.00	0.00	0.00	4.00	6.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTCC...........................................................................................................................................................	21	1	10.00	0.00	0.00	2.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCT...............................................	20	1	10.00	0.00	0.00	2.00	8.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCT...............................................	20	1	10.00	0.00	0.00	4.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCT...............................................	20	1	10.00	0.00	0.00	0.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGTTTCAGCTC..............................................	21	1	10.00	0.00	1.00	0.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTGTCAGCTC..............................................	21	1	10.00	0.00	0.00	4.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCT...............................................	20	1	9.00	0.00	0.00	2.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCAGGAGATTCAGCT...............................................	20	1	9.00	0.00	0.00	1.00	8.00	0.00

droWil1

--------------------------------------------------------------------------------------------------------------------------------AAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT--GG---GGCCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAT-CA------CA-------	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	40572.00	703.00	24453.00	15184.00	232.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	8860.00	22.00	355.00	177.00	8306.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	4241.00	155.00	2280.00	1798.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	2041.00	65.00	1762.00	205.00	9.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	1404.00	17.00	618.00	764.00	5.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	536.00	52.00	149.00	116.00	219.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	521.00	6.00	307.00	207.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	332.00	1.00	260.00	71.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	322.00	0.00	1.00	31.00	290.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.........................................................................................................................................................	22	1	259.00	0.00	0.00	0.00	259.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	200.00	1.00	4.00	17.00	178.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	127.00	1.00	82.00	43.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	125.00	2.00	77.00	45.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	92.00	0.00	54.00	36.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	90.00	3.00	77.00	10.00	0.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	89.00	0.00	34.00	55.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	86.00	1.00	50.00	35.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	77.00	0.00	35.00	42.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	77.00	0.00	31.00	46.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	68.00	0.00	18.00	50.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	1	64.00	1.00	46.00	17.00	0.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	61.00	0.00	8.00	53.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	57.00	2.00	30.00	23.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	56.00	0.00	15.00	41.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	55.00	1.00	32.00	22.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	51.00	0.00	37.00	14.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	49.00	0.00	23.00	24.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	49.00	0.00	36.00	12.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	48.00	0.00	24.00	22.00	2.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	48.00	0.00	28.00	20.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	45.00	0.00	26.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	45.00	2.00	23.00	20.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	44.00	1.00	24.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	44.00	1.00	21.00	22.00	0.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	44.00	0.00	17.00	27.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	43.00	2.00	23.00	17.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	42.00	8.00	3.00	11.00	20.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	40.00	0.00	15.00	24.00	1.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	40.00	1.00	23.00	16.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	38.00	0.00	26.00	12.00	0.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	38.00	0.00	4.00	34.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	36.00	0.00	32.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	36.00	0.00	13.00	23.00	0.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	1	35.00	0.00	20.00	15.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	33.00	1.00	13.00	19.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	33.00	0.00	16.00	17.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	32.00	0.00	15.00	17.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	32.00	3.00	9.00	20.00	0.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	31.00	2.00	12.00	16.00	1.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	31.00	0.00	16.00	15.00	0.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	1	30.00	0.00	8.00	22.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T........................................................................................................................................................	23	1	29.00	0.00	2.00	2.00	25.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	28.00	0.00	13.00	15.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	28.00	1.00	6.00	18.00	3.00
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	1	28.00	0.00	16.00	12.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGGCTGCA-.........................................................................................................................................................	22	1	24.00	0.00	0.00	0.00	24.00
..............................................................................................................................................ACTGAATTCTCGAGGGTCTGCA-.........................................................................................................................................................	22	1	24.00	0.00	0.00	0.00	24.00
...........................................................................................................................................................................................................................................................TAGCCCCATGAGATTCAGCTC..............................................	21	1	23.00	0.00	11.00	12.00	0.00
.............................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................	19	1	22.00	0.00	8.00	14.00	0.00
........................................................................................................................................................................................................................................................TTGTAGCACCATGAGATTCAGC................................................	22	1	21.00	0.00	18.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	21.00	0.00	10.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	1	20.00	0.00	8.00	12.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAAATTCAGCTC..............................................	21	1	20.00	0.00	4.00	14.00	2.00
..............................................................................................................................................ACTAAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	19.00	0.00	1.00	2.00	16.00
..............................................................................................................................................ACTGAATTCTCGTGGGCCTGCA-.........................................................................................................................................................	22	1	18.00	0.00	1.00	0.00	17.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	17.00	0.00	16.00	1.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.........................................................................................................................................................	22	1	16.00	0.00	0.00	1.00	15.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	16.00	0.00	7.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTC.................................................	18	1	15.00	0.00	6.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	1	15.00	1.00	4.00	10.00	0.00
............................................................................................................................................................................................................................................................TACACCATGAGATTCAGCTC..............................................	20	1	14.00	0.00	7.00	6.00	1.00
..............................................................................................................................................GCTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	14.00	0.00	1.00	2.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAATCAGCTC..............................................	21	1	13.00	0.00	3.00	10.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTGAGCTC..............................................	21	1	13.00	0.00	10.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAC..............................................	21	1	13.00	0.00	5.00	8.00	0.00
..............................................................................................................................................ACTGAATTCTCGGGGGTCTGCA-.........................................................................................................................................................	22	1	13.00	0.00	0.00	0.00	13.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCC.............................................................................................................................................................	19	1	13.00	0.00	0.00	1.00	12.00
..............................................................................................................................................ACTGAATTCTCGCGGGTCTGCA-.........................................................................................................................................................	22	1	12.00	0.00	1.00	0.00	11.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGAT...............................................	20	1	12.00	0.00	1.00	11.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................	22	1	10.00	0.00	9.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCT...............................................	20	1	10.00	0.00	5.00	5.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGACTGCA-.........................................................................................................................................................	22	1	10.00	0.00	0.00	1.00	9.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCT...............................................	20	1	10.00	0.00	3.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCTTGAGATTCAGCTC..............................................	21	1	10.00	1.00	4.00	5.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	1	10.00	1.00	0.00	0.00	9.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATACAGCTC..............................................	21	1	10.00	0.00	3.00	7.00	0.00
.....................................................................................................................................................................CTGA---CAACACTG--ACC-GCT---------GCTTTAAACCT--...........................................................................................................	29	1	10.00	0.00	0.00	0.00	10.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCT...............................................	21	1	9.00	0.00	4.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	9.00	0.00	4.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGGACCATGAGATTCAGCTC..............................................	21	1	9.00	0.00	5.00	4.00	0.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTCT.............................................	22	1	9.00	0.00	6.00	3.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGTGTCTGCA-.........................................................................................................................................................	22	1	9.00	0.00	0.00	0.00	9.00
.................................................................................................................................................GAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	19	1	9.00	0.00	0.00	0.00	9.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCC...............................................	20	1	9.00	0.00	3.00	4.00	2.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTT..............................................	21	1	9.00	1.00	7.00	1.00	0.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCT...............................................	20	1	8.00	1.00	4.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCAAGAGATTCAGCTC..............................................	21	1	8.00	0.00	4.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCT...............................................	20	1	8.00	0.00	4.00	4.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCT...............................................	20	1	8.00	0.00	4.00	4.00	0.00
..............................................................................................................................................ACTGAATTCTCGTxGGTCTGCA-.........................................................................................................................................................	21	1	8.00	0.00	0.00	0.00	8.00

droVir3

CTTTATGTCGATGTTTTTTCGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAT-A---------------------AA-------TGGAAA----CCATTTGCTCGCAACGCGCAAGCG-CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCACTAA--------------G	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	8347.00	1994.00	4482.00	1823.00	5.00	43.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	2502.00	78.00	39.00	31.00	877.00	1477.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	915.00	265.00	521.00	127.00	0.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	646.00	1.00	66.00	2.00	79.00	498.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	523.00	13.00	33.00	0.00	65.00	412.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	477.00	157.00	104.00	13.00	57.00	146.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	459.00	188.00	193.00	76.00	0.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	279.00	30.00	190.00	59.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCG-.........................................................................................................................................................	22	1	138.00	1.00	1.00	0.00	49.00	87.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	133.00	23.00	54.00	56.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCC.............................................................................................................................................................	19	1	76.00	0.00	1.00	0.00	5.00	70.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	62.00	32.00	18.00	0.00	3.00	9.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	49.00	30.00	10.00	9.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	43.00	2.00	40.00	1.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	36.00	8.00	10.00	18.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	36.00	4.00	17.00	15.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCG.............................................................................................................................................................	19	1	35.00	1.00	1.00	0.00	5.00	28.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	34.00	1.00	24.00	9.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	33.00	3.00	27.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	30.00	0.00	30.00	0.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	27.00	2.00	20.00	5.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	23.00	7.00	15.00	1.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCA.............................................................................................................................................................	19	1	21.00	5.00	3.00	0.00	1.00	12.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	19.00	5.00	5.00	9.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	18.00	3.00	10.00	4.00	0.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTT..............................................................................................................................................................	18	1	17.00	0.00	10.00	0.00	1.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGC..............................................	21	1	17.00	0.00	11.00	6.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	16.00	3.00	13.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T........................................................................................................................................................	23	1	15.00	4.00	0.00	0.00	0.00	11.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	15.00	2.00	11.00	2.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	1	15.00	6.00	8.00	0.00	0.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	14.00	4.00	7.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	14.00	1.00	7.00	6.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	1	14.00	2.00	4.00	8.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	14.00	3.00	8.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	14.00	2.00	12.00	0.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	14.00	1.00	8.00	5.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	13.00	0.00	3.00	10.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	13.00	0.00	13.00	0.00	0.00	0.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	13.00	3.00	5.00	5.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	13.00	0.00	12.00	1.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	12.00	0.00	6.00	6.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	12.00	0.00	5.00	7.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATGCAGCTC..............................................	21	1	11.00	0.00	8.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	11.00	2.00	7.00	2.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	11.00	4.00	6.00	1.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.........................................................................................................................................................	22	1	11.00	1.00	1.00	0.00	1.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	10.00	0.00	4.00	6.00	0.00	0.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	10.00	1.00	5.00	4.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	10.00	0.00	5.00	5.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	10.00	0.00	6.00	4.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTT..............................................	21	1	9.00	0.00	8.00	1.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGG...........................................................................................................................................................	21	1	9.00	0.00	1.00	0.00	3.00	5.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	9.00	2.00	5.00	2.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	9.00	3.00	2.00	4.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	9.00	8.00	1.00	0.00	0.00	0.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	8.00	2.00	2.00	4.00	0.00	0.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	1	8.00	3.00	2.00	3.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-A........................................................................................................................................................	23	1	8.00	0.00	0.00	0.00	1.00	7.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	8.00	0.00	5.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	8.00	3.00	2.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	8.00	1.00	5.00	2.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	8.00	1.00	3.00	4.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGAC..............................................................................................................................................................	18	1	7.00	0.00	1.00	0.00	1.00	5.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-TT.......................................................................................................................................................	24	1	7.00	0.00	0.00	0.00	2.00	5.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-T........................................................................................................................................................	23	1	7.00	1.00	0.00	0.00	1.00	5.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCTC..............................................	21	1	7.00	0.00	6.00	1.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	7.00	0.00	4.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	7.00	0.00	4.00	3.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	7.00	3.00	4.00	0.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	7.00	1.00	6.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGGCTGCA-.........................................................................................................................................................	22	1	7.00	0.00	1.00	1.00	0.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	7.00	0.00	5.00	2.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGTTCTGC...........................................................................................................................................................	21	1	7.00	1.00	0.00	0.00	2.00	4.00
...............................TTTTTTTTTTTTTTTTTTTTT..........................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
.........................TTTTTTTTTTTTTTTTTTTTT................................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCTC..............................................	21	1	6.00	0.00	3.00	3.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTA..............................................................................................................................................................	18	1	6.00	0.00	3.00	0.00	1.00	2.00
.............................TTTTTTTTTTTTTTTTTTTTT............................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
............................TTTTTTTTTTTTTTTTTTTTT.............................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
.................................TTTTTTTTTTTTTTTTTTTTT........................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCCC..............................................	21	1	6.00	0.00	6.00	0.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCT...............................................	20	1	6.00	0.00	5.00	1.00	0.00	0.00
...........................TTTTTTTTTTTTTTTTTTTTT..............................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	6.00	1.00	3.00	2.00	0.00	0.00
..................................TTTTTTTTTTTTTTTTTTTTT.......................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
...................................TTTTTTTTTTTTTTTTTTTTT......................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
..............................TTTTTTTTTTTTTTTTTTTTT...........................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
................................TTTTTTTTTTTTTTTTTTTTT.........................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	1	6.00	1.00	1.00	0.00	1.00	3.00
........................TTTTTTTTTTTTTTTTTTTTT.................................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	1	6.00	0.00	2.00	4.00	0.00	0.00
..........................TTTTTTTTTTTTTTTTTTTTT...............................................................................................................................................................................................................................................................................	21	33	0.18	0.03	0.00	0.00	0.03	0.12
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................	22	1	6.00	5.00	1.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTTGGTC..............................................................................................................................................................	18	1	5.00	0.00	0.00	0.00	0.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................	24	1	5.00	0.00	5.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGCCTGC...........................................................................................................................................................	21	1	5.00	2.00	0.00	1.00	2.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	1	5.00	2.00	0.00	0.00	0.00	3.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCT...............................................	20	1	5.00	0.00	4.00	1.00	0.00	0.00
...........................................................................................................................................................................................................................................................TAGCACGATGAGATTCAGCTC..............................................	21	1	5.00	0.00	5.00	0.00	0.00	0.00
..............................................................................................................................................ACTGAATTCTCGTxGGTCTGC...........................................................................................................................................................	20	1	5.00	0.00	0.00	0.00	2.00	3.00

droMoj3

CA-------------------------------------------------------AAT-A-------------------TCAA-------TGGATA----CCATT------------------AAAAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTGTAACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAA-ATTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAGTTTCAA-ACATGCATTCACCAA------AAAATGAAA	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	19181.00	2763.00	7009.00	4986.00	4423.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	2053.00	506.00	756.00	573.00	218.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	1530.00	494.00	378.00	296.00	362.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	938.00	293.00	384.00	234.00	27.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	832.00	358.00	256.00	150.00	68.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	789.00	67.00	257.00	217.00	248.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	308.00	42.00	102.00	93.00	71.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	159.00	22.00	78.00	44.00	15.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTC..............................................	21	1	91.00	1.00	27.00	41.00	22.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	85.00	0.00	19.00	52.00	14.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTC..............................................	21	1	78.00	0.00	48.00	24.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	75.00	7.00	19.00	22.00	27.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	68.00	0.00	11.00	38.00	19.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	67.00	5.00	18.00	19.00	25.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	59.00	31.00	16.00	9.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	52.00	1.00	24.00	25.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	45.00	3.00	16.00	25.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCCC..............................................	21	1	44.00	2.00	16.00	18.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCGC..............................................	21	1	41.00	0.00	17.00	12.00	12.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	41.00	3.00	15.00	15.00	8.00
..............................................................................................................................................ACTGAATTCTCGTGGGTC..............................................................................................................................................................	18	1	40.00	4.00	15.00	21.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTTC...........................................................................................................................................................	21	1	40.00	0.00	10.00	30.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	40.00	4.00	20.00	8.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCG.............................................	22	1	36.00	2.00	25.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	36.00	1.00	17.00	8.00	10.00
...........................................................................................................................................................................................................................................................CAGCACCATGAGATTCAGCTC..............................................	21	1	35.00	5.00	14.00	12.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTC..............................................	21	1	33.00	0.00	17.00	7.00	9.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	33.00	3.00	17.00	10.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATAAGATTCAGCTC..............................................	21	1	33.00	3.00	1.00	19.00	10.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................	22	1	30.00	22.00	3.00	4.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	26.00	2.00	15.00	4.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	26.00	2.00	14.00	5.00	5.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	26.00	3.00	11.00	4.00	8.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	25.00	10.00	6.00	4.00	5.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	24.00	1.00	10.00	11.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAGTCAGCTC..............................................	21	1	24.00	0.00	14.00	8.00	2.00
..........................................................................................................................................................................................................................................................CTAGCACCATGAGATTCAGCTC..............................................	22	1	24.00	0.00	11.00	7.00	6.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	24.00	0.00	8.00	9.00	7.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	24.00	1.00	10.00	7.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	24.00	3.00	8.00	9.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	23.00	0.00	17.00	4.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTG..............................................	21	1	23.00	0.00	2.00	4.00	17.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	23.00	0.00	11.00	6.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	22.00	0.00	13.00	7.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCT-.........................................................................................................................................................	22	1	22.00	6.00	7.00	8.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTTT...........................................	24	1	21.00	2.00	13.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCCTGAGATTCAGCTC..............................................	21	1	20.00	0.00	5.00	13.00	2.00
...........................................................................................................................................................................................................................................................AAGCACCATGAGATTCAGCTC..............................................	21	1	18.00	3.00	6.00	4.00	5.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	17.00	1.00	4.00	8.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATGCAGCTC..............................................	21	1	17.00	0.00	10.00	3.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	17.00	1.00	6.00	6.00	4.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	16.00	2.00	5.00	2.00	7.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCT.............................................................................................................................................................	19	1	16.00	8.00	5.00	2.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	16.00	3.00	3.00	8.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	16.00	2.00	8.00	3.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCT...............................................	20	1	16.00	0.00	4.00	10.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	15.00	0.00	7.00	6.00	2.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCTC..............................................	21	1	14.00	2.00	6.00	5.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGACATTCAGCTC..............................................	21	1	14.00	0.00	6.00	6.00	2.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCTC..............................................	21	1	14.00	1.00	12.00	1.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGT...........................................................................................................................................................	21	1	13.00	6.00	4.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................	22	1	13.00	3.00	5.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	13.00	0.00	8.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCTT..............................................	21	1	12.00	0.00	5.00	6.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	1	12.00	1.00	6.00	5.00	0.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTC..............................................	21	1	12.00	0.00	5.00	7.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGTTTCAGCT...............................................	20	1	11.00	0.00	5.00	6.00	0.00
...........................................................................................................................................................................................................................................................TAGTACCATGAGATTCAGCTC..............................................	21	1	11.00	2.00	3.00	1.00	5.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	11.00	2.00	5.00	1.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCCGCTC..............................................	21	1	11.00	0.00	2.00	9.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAAATTCAGCTC..............................................	21	1	11.00	0.00	0.00	7.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	11.00	3.00	4.00	3.00	1.00
...........................................................................................................................................................................................................................................................TAGGACCATGAGATTCAGCTC..............................................	21	1	10.00	2.00	0.00	5.00	3.00
...........................................................................................................................................................................................................................................................GAGCACCATGAGATTCAGCTC..............................................	21	1	10.00	1.00	2.00	5.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	10.00	1.00	5.00	1.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATTAGATTCAGCTC..............................................	21	1	9.00	2.00	1.00	5.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGCTTCAGCTT..............................................	21	1	9.00	0.00	0.00	6.00	3.00
...........................................................................................................................................................................................................................................................TAGCACCATGTGATTCAGCTC..............................................	21	1	9.00	0.00	5.00	1.00	3.00
...........................................................................................................................................................................................................................................................TAGCCCCATGAGATTCAGCTC..............................................	21	1	9.00	0.00	6.00	3.00	0.00
..............................................................................................................................................ACTGAATTCTCGTGGGTTT.............................................................................................................................................................	19	1	9.00	5.00	1.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGAATCAGCTC..............................................	21	1	9.00	1.00	4.00	3.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGTTTCAGCTC..............................................	21	1	9.00	0.00	4.00	4.00	1.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	8.00	5.00	0.00	2.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTT..............................................	21	1	7.00	0.00	2.00	3.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTCT.............................................	22	1	7.00	0.00	1.00	4.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTCC...........................................................................................................................................................	21	1	7.00	1.00	5.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTG............................................	23	1	7.00	0.00	4.00	3.00	0.00
.............................................................................................................................................................................................................................................................GCACCATGAGATTCAGCTC..............................................	19	1	7.00	3.00	1.00	1.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTCT.............................................	22	1	7.00	0.00	0.00	6.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTT............................................................................................................................................................	20	1	7.00	3.00	1.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGGTC..............................................	21	1	7.00	0.00	4.00	2.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTT..............................................................................................................................................................	18	1	7.00	0.00	2.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGAACCATGAGATTCAGCT...............................................	20	1	6.00	1.00	2.00	3.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCTTGAGATTCAGCT...............................................	20	1	6.00	0.00	5.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTGAGCTC..............................................	21	1	6.00	0.00	3.00	1.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGATC..............................................	21	1	6.00	0.00	3.00	1.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCT...............................................	20	1	6.00	0.00	2.00	2.00	2.00
..............................................................................................................................................ACTGAATTCTCGTGGGCCTGC...........................................................................................................................................................	21	1	6.00	0.00	4.00	2.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCAC..............................................	21	1	6.00	0.00	5.00	1.00	0.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTT..............................................	21	1	6.00	0.00	1.00	5.00	0.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCT...............................................	20	1	6.00	0.00	4.00	2.00	0.00

droGri2

CTTTATGTTGCTC------------------------------------------------AAATGGGACCATTCTGTATATCAA-------T---------CCAAT------CAACGCGCAAGCG-CAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCA-GTG-------CACTG--ACC-GTT------------------GCA-GA---GGGCAAT--TGTTCAT-TTTGAAATTGAAATTTTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAA-ACATGCATCCAC-CAAATC---AAATCA-A	Size	Hit Count	Total Norm	V109 Male body
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTC..............................................	21	1	687.00	687.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCT...............................................	20	1	239.00	239.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTT..............................................	21	1	172.00	172.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGC...........................................................................................................................................................	21	1	50.00	50.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	46.00	46.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCA.............................................	22	1	24.00	24.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCT.............................................	22	1	18.00	18.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTT.............................................	22	1	8.00	8.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTC..............................................	21	1	7.00	7.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTG............................................................................................................................................................	20	1	6.00	6.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTC..............................................	21	1	6.00	6.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTC..............................................	21	1	5.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGC................................................	19	1	5.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACT...............................................	20	1	5.00	5.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTT..............................................	21	1	4.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCACGAGATTCAGCTC..............................................	21	1	4.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTC..............................................	21	1	4.00	4.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCT...............................................	20	1	3.00	3.00
...........................................................................................................................................................................................................................................................TAGCATCATGAGATTCAGCTC..............................................	21	1	3.00	3.00
...........................................................................................................................................................................................................................................................TAGCGCCATGAGATTCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCT...............................................	20	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCAGCATGAGATTCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCACTATGAGATTCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCT...............................................	20	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATCCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTT..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCAACATGAGATTCAGCTT..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGACTCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TAGCACCAGGAGATTCAGCTC..............................................	21	1	2.00	2.00
...........................................................................................................................................................................................................................................................TATCACAATGAGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGTTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTGA...........................................	24	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCT...............................................	20	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCCGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCACCTTT.............................................	22	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGATC..............................................	21	1	1.00	1.00
..............................................................................................................................................ACTGAATTCTCTTGGGTTT.............................................................................................................................................................	19	1	1.00	1.00
..............................................................................................................................................ACTGAACTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCTT..............................................	21	1	1.00	1.00
..............................................................................................................................................ACTGAAATCTCGTGGGTCTGC...........................................................................................................................................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCGGCTT..............................................	21	1	1.00	1.00
............................................................................................................................................................................................................................................................TACACCATGAGATTCAGCTC..............................................	20	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGGGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TGGCACCATGAGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTAAGCTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCTT............................................	23	1	1.00	1.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCT...............................................	20	1	1.00	1.00
...........................................................................................................................................................................................................................................................TCGCACCATGAGATTCAGCTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTCC.............................................	22	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGGTTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATACAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAACTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCATCTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCGTGAGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTC..............................................	21	1	1.00	1.00
..............................................................................................................................................ACTGACTTCTCGTGGGTCTGCA-.........................................................................................................................................................	22	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGCGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTA.............................................	22	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATCAGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCAAGAGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGATATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCA...............................................	20	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTTC.............................................	22	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTTAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAGCTA..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAACACCATGAGATTCAGCTT..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TACCACCATGAGATTCAGCTTT.............................................	22	1	1.00	1.00
.........................................................................................................................................TTGGAACTGAATTCTCGTGGG................................................................................................................................................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCAG.................................................	18	1	1.00	1.00
............................................................................................................................................................................................................................................................AGCACCATGAGATTCAGCTC..............................................	20	1	1.00	1.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCT...............................................	20	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACCATGAGATTCTGCTCT.............................................	22	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACAATGAGATTCAGCT...............................................	20	1	1.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGCTCTGC...........................................................................................................................................................	21	1	1.00	1.00
..............................................................................................................................................ACTGAATTCTCGTGGGTCTGCA-T........................................................................................................................................................	23	1	1.00	1.00
..............................................................................................................................................................................................................................................................TACCATGAGATTCAGCTC..............................................	18	1	1.00	1.00
...........................................................................................................................................................................................................................................................TATCACCATGAGATTCAGCTC..............................................	21	1	1.00	1.00
...........................................................................................................................................................................................................................................................TAGCACGATGAGATTCAGCTC..............................................	21	1	1.00	1.00

Generated: 04/20/2012 at 05:19:20 EDT

dme-mir-998

chr3R:17447601-17447743 -

Known_mirbase

intron

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Legend

Re-alignment after removal of non-confident orthologs

20-way Secondary Structure

Small RNA-seq read pileup