Possible Orthologs for dme-mir-994

droSim1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 chr3R:15159284-15159404 - 95.91
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCATGCATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATCC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.....................................................................TATCACAGTGGCTGTTTTTTT...............................2144.750.000.000.004.75
.....................................................................TATCACAGTGGCTGTTTTTTTT..............................2243.250.000.000.003.25
.....................................................................TATCACAGTGGCTGTTTTTT................................2042.000.000.000.002.00
.....................................................................TATCACAGTTGCTGTTCTTTTT..............................2241.250.250.000.001.00
.....................................................................TATCACAGTTGCTGTTCTTTT...............................2140.750.250.000.000.50
.....................................................................TATCACAGTGGCTGGTTCTTTT..............................2212.000.000.000.002.00
...........................TAAGGAAATAGTAGCCGTGATT........................................................................2212.000.000.000.002.00
...........................TAAGGAAATAGTAGCCGTGA..........................................................................2012.000.000.000.002.00
.....................................................................TATCACAGTTGCTGTTCGT.................................1940.250.250.000.000.00
...........................TAAGGAAATAGTAGCCGTGG..........................................................................2011.000.000.000.001.00
..........................CTAACGAAATAGTAGCCGTGAT.........................................................................2211.000.000.000.001.00
.....................................................................TATCACAGTGGCTGTTCCTTTT..............................2240.250.000.000.000.25
.....................................................................TATCACAGTAGCTGTTTTTTTT..............................2240.250.000.000.000.25
..........................CTAAGGAAATAGTAGCCGTGATT........................................................................2311.000.001.000.000.00
......................................................................ATCACAGTGGCTGTTTTTTT...............................2040.250.000.000.000.25
.....................................................................TATCACAGTTGCxATTTCTT................................1911.001.000.000.000.00
.....................................................................TATCACAGTGGCTGTTTCTTTTT.............................2320.500.000.000.000.50
.....................................................................TATCACAGTGGCTGTTTGTTT...............................2140.250.250.000.000.00
..........................CTAAGGAAATAGTAGCCGTGA..........................................................................2111.000.001.000.000.00
..........................CTAAGGAAATAGTAGCCGTGAT.........................................................................2211.000.001.000.000.00


droSec1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 super_0:15709450-15709570 - 95.91
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCATGATTTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATCC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..........................CTAAGGAAATAGTAGCCGTGAT.........................................................................221530.00187.000.00343.00
.....................................................................TATCACAGTGGCTGTTCCTTTT..............................22562.200.0061.400.80
.....................................................................TATCACAGTGGCTGTTTTTTTT..............................22545.600.0044.401.20
...........................TAAGGAAATAGTAGCCGTGAT.........................................................................211211.0080.001.00130.00
........................................................................CACAGTTGCTGTTTCTTTTAGAT..........................231167.0028.000.00139.00
...........................TAAGGAAATAGTAGCCGTGATT........................................................................221137.0063.000.0074.00
.....................................................................TATCACAGTTGCTGTTCTTTTT..............................22518.400.0018.200.20
.....................................................................TATCACAGTGGCTGTTCCTTT...............................21514.200.0014.200.00
.....................................................................TATCACAGTGGCTGTTTTTTT...............................21513.000.0012.800.20
..........................CTAAGGAAATAGTAGCCGTGA..........................................................................21161.0025.000.0036.00
...........................TAAGGAAATAGTAGCCGTGA..........................................................................20148.0021.000.0027.00
.........................TCTAAGGAAATAGTAGCCGTGA..........................................................................22131.008.000.0023.00
.....................................................................TATCACAGTTGCTGTTTCTTTT..............................22121.003.000.0018.00
.....................................................................TATCACAGTGGCTGTTTTT.................................1954.000.004.000.00
.....................................................................TATCACAGTGGCTGTTTTTT................................2053.800.003.800.00
.....................................................................TATCACAGTTGCTGTTCTTTT...............................2153.400.003.400.00
.......................................................................TCACAGTTGCTGTTTCTTTTAG............................22113.001.000.0012.00
......................................................................ATCACAGTTGCTGTTTCTTTTAG............................23110.001.000.009.00
..........................CTAAGGAAATAGTAGCCGTG...........................................................................2019.000.000.009.00
..........................CTAAGGAAATAGTAGCCGTGATT........................................................................2319.004.000.005.00
........................................................................CACAGTTGCTGTTTCTTTTAG............................2118.001.000.007.00
.......................................................................TCACAGTTGCTGTTTCTTTTAGA...........................2317.000.000.007.00
.....................................................................TATCACAGTGGCTGTTCCTT................................2051.400.001.400.00
.........................................................................ACAGTTGCTGTTTCTTTTAGATT.........................2315.002.000.003.00
.....................................................................TATCACAGTTGCTGTTCTTT................................2051.000.001.000.00
.....................................................................TATCACAGTTGCTGTTTCTTT...............................2114.001.000.003.00
..........................CTAAGGAAATAGTAGCCGTGATA........................................................................2314.002.000.002.00
.....................................................................TATCACAGTGGCTGTTTT..................................1850.800.000.800.00
...........................TAAGGAAATAGTAGCCTTGATT........................................................................2213.000.000.003.00
.........................................................................ACAGTGGCTGTTCCTTTT..............................1850.600.000.600.00
........................................................................CACAGTTGCTGTTTCTTTTAGA...........................2213.000.000.003.00
........................................................................CACAGTTGCTGTTTCTTTTAGATT.........................2413.000.000.003.00
..........................CTAAGGAAATAGTAGCCGAGAT.........................................................................2213.001.000.002.00


droYak2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr3R:10262359-10262479 + 96.72
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGTTCC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
..........................CTAAGGAAATAGTAGCCGTGAT.........................................................................221168.000.0016.0083.0055.0014.00
...........................TAAGGAAATAGTAGCCGTGAT.........................................................................211120.000.0015.0063.0030.0012.00
...........................TAAGGAAATAGTAGCCGTGATT........................................................................22176.000.004.0050.0016.006.00
..........................CTAAGGAAATAGTAGCCGTGA..........................................................................21120.000.002.009.007.002.00
...........................TAAGGAAATAGTAGCCGTGA..........................................................................20120.000.000.0015.004.001.00
........................................................................CACAGTTGCTGTTTCTTTTAGAT..........................23112.000.000.0010.002.000.00
.........................TCTAAGGAAATAGTAGCCGTGA..........................................................................22111.000.001.006.004.000.00
..........................CTAAGGAAATAGTAGCCGTGATT........................................................................2316.000.000.004.002.000.00
..........................CTAAGGAAATAGTAGCCGTGCT.........................................................................2213.000.000.000.002.001.00
.....................................................................TATCACAGTTGCTGTTTCTTTT..............................2213.000.000.002.001.000.00
..........................CTAAGGAAATAGTAGCCGTGATA........................................................................2313.000.001.002.000.000.00
..........................CTAAGGAAATAGTAGCCGTGTT.........................................................................2212.000.000.000.002.000.00
.........................TCTAAGGAAATAGTAGCCGTG...........................................................................2112.000.001.000.000.001.00
...........................TAAGGAAATGGTAGCCGTGATT........................................................................2212.000.000.000.002.000.00
.....................................................................TATCACAGTTGCTGTTCTTTTT..............................2280.250.250.000.000.000.00
...........................TAAGGAAATAGTAGCCGTGG..........................................................................2012.000.000.000.000.002.00
..........................CTAAGGAAATAGTAGCCGTGGT.........................................................................2211.000.000.000.001.000.00
...........................TAAGGAAATATTAGCCGTGATT........................................................................2211.000.000.001.000.000.00
...........................TAAGGAAATAGTAGCAGTGAT.........................................................................2111.000.000.000.001.000.00
...........................TAAGGAAATAGTAGCCGTGCTT........................................................................2211.000.000.000.001.000.00
...........................TAAGGAAATAGTAGCCGTGATTTA......................................................................2411.000.000.001.000.000.00
......................................................................ATCACAGTTGCTGTTTCTTTTAG............................2311.000.001.000.000.000.00
..........................CTAAGGAAATGGTAGCCGTGAT.........................................................................2211.000.000.000.001.000.00
..........................CTAAGGCAATAGTAGCCGGGAT.........................................................................2211.000.001.000.000.000.00
...........................TAAGGAGATAGTAGCCGTGAT.........................................................................2111.000.000.000.001.000.00
...........................TAAGGAAATAGGAGCCGTGTTT........................................................................2211.000.000.000.001.000.00
..........................CTAAGGxAATAGTAGCCGTGATT........................................................................2211.000.000.000.001.000.00
.........................................................................ACAGTTGCTGTTTCTTTTAGATT.........................2311.000.000.001.000.000.00
.....................................................................TATCACAGTGGCTGTTTTTT................................2080.130.130.000.000.000.00
...........................TAAGGAAATAGTAGCCGTGAC.........................................................................2111.000.000.000.000.001.00
.....................................................................TATCACAGTTGCTGTTTTTTTT..............................2280.130.130.000.000.000.00
...........................TAATGAAATAGTAGCCGTGA..........................................................................2011.000.000.001.000.000.00
..........................ATAAGGAAATACTAGCCGTGAT.........................................................................2211.000.000.000.001.000.00
...........................TAAGGAAATAGTAGCCGTGGGT........................................................................2211.000.001.000.000.000.00
..........................CTAAGGAACTAGCAGCCGTGAT.........................................................................2211.000.000.000.001.000.00
...........................TAAGGAAATAGTAGCCGTGATTT.......................................................................2311.000.000.000.001.000.00
.....................................................................TATCACAGTTGCTGTTTCTTT...............................2111.000.001.000.000.000.00
..........................CTAAGGAAATAGGAGCCGTGATT........................................................................2311.000.000.001.000.000.00
.....................................................................TAGCACAGATGCTGTTTCT.................................1911.001.000.000.000.000.00
...........................TAAGGAAATATTAGCCGTGA..........................................................................2011.000.000.001.000.000.00
...........................TAAGGAAATAGTAGCCGTGAG.........................................................................2111.000.000.000.000.001.00
...........................TAAGGAAATAGTAGCCGTGATA........................................................................2211.000.000.001.000.000.00
..........................CTAAGGAAATAGTAGCCG.............................................................................1811.000.000.000.000.001.00
.........................................................................ACAGTTGCTGTTTCTTTTTGAT..........................2211.000.000.000.001.000.00
.....................................................................TATCACAGTAGCTGTTTTTTT...............................2180.130.130.000.000.000.00
..........................CTAAGGAAATAGCAGCCGCGAT.........................................................................2211.000.000.000.001.000.00
.........................TCTAAGGAAATAGTAGCCGTGAT.........................................................................2311.000.000.000.001.000.00
...........................TAAGGAAATAGTAGCCGTGTTT........................................................................2211.000.000.000.001.000.00
..........................CTAAGGAAATAGTAGCCGTTAT.........................................................................2211.000.000.000.001.000.00
...........................TAAGGAAATAGGAGCCGTGAT.........................................................................2111.000.000.000.001.000.00
.....................................................................TATCACAGTTGCTGTTTCTTTTA.............................2311.000.000.001.000.000.00
..........................CTAAGGAAATAGTAGCCCTGGT.........................................................................2211.000.000.000.001.000.00
...........................TAAGGCAATAGTAGCCGAGATT........................................................................2211.000.000.000.001.000.00
.....................................................................TATCACAGTTGTTGTTTCTTTT..............................2211.000.000.001.000.000.00
.....................................................................TATCACAGTGGCGGTTTCTTTT..............................2211.001.000.000.000.000.00
...........................TAAGGAAATAGTATCCGTGATT........................................................................2211.000.000.001.000.000.00
...........................TAAGGAAATAGTAGCCCTGAT.........................................................................2111.000.000.000.001.000.00
...........................TAAGGAAATAGTAGCCGTGCT.........................................................................2111.000.000.000.001.000.00
..........................CTAAGGAAATAGTAGCCGTGATAA.......................................................................2411.000.000.001.000.000.00
...........................................................................AGTTGCTGTTTxTTTTACA...........................1811.000.000.000.001.000.00
..........................CTAAGGATATAGTAGCCGCGAT.........................................................................2211.000.001.000.000.000.00
...........................TAAGGAAATAGTAACCGTGAT.........................................................................2111.000.000.000.001.000.00
..........................CTAAGGATATAGTAGCCGTGAG.........................................................................2211.000.000.000.001.000.00
...........................TAAGGGAATAGTAGCCGTGAT.........................................................................2111.000.001.000.000.000.00
..........................CTAATGAAATAGTAGCCGTGAT.........................................................................2211.000.000.001.000.000.00
...........................TACGGAAATAGTAGCCGTGATT........................................................................2211.000.000.001.000.000.00
...........................TAAGGAAATAATAGCCGTGATT........................................................................2211.000.001.000.000.000.00
..........................CTAAGGGAATAGTAGCCGTGAT.........................................................................2211.000.000.000.001.000.00
..........................CTAAGCAAATAGTAGCCGTTA..........................................................................2111.000.000.000.001.000.00
..........................CTAAGGAAATAGAAGCCGTGAT.........................................................................2211.000.000.000.001.000.00
..........................CTAAGGAACTAGTAGCCGTGA..........................................................................2111.000.000.001.000.000.00
...........................TAAGGAAATAGTAGCCGTGATC........................................................................2211.000.000.000.000.001.00
..........................CTAAGGAAATAGTAGCCTTGAC.........................................................................2211.000.000.001.000.000.00
........................................................................CACAGTTGCTGTTTCTTTTA.............................2011.000.000.001.000.000.00
..........................CTAAGGAAATAGTAGCCGAGAT.........................................................................2211.000.000.000.001.000.00
...........................TAAGGAATTAGTAGCCGTGATT........................................................................2211.000.000.000.001.000.00
..........................CTAAGGAACTAGTAGCCTTGAT.........................................................................2211.000.000.000.001.000.00
..........................CTAAGGAAATAGTAGCCCTGAT.........................................................................2211.000.000.000.001.000.00
..........................CTAAGGAAATAGTAGCCGTGG..........................................................................2111.000.000.000.000.001.00
...........................TAAGGAAATAGCAGCCGTGAT.........................................................................2111.000.000.000.001.000.00
..........................CTAAGGAAAGAGTAGCCGTGAT.........................................................................2211.000.000.000.001.000.00
..........................CTAAGGAAATCGTAGCCGTGAT.........................................................................2211.000.000.000.001.000.00


droEre2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_4770:15384035-15384155 - 95.1
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCATGAATTGTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGTTCC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.....................................................................TATCACAGTGGCTGTTTTTTTT..............................2250.800.800.000.000.00
...........................TAAGGAAATAGTAGCCGTGAT.........................................................................2113.000.003.000.000.00
.....................................................................TATCACAGTTGCTGTTCTTTTT..............................2250.200.200.000.000.00
.....................................................................TATCACAGTGGCTGTTTTTTT...............................2150.200.200.000.000.00
...........................TAAGGAAATAGTAGCCGTGATT........................................................................2211.000.000.000.001.00
.....................................................................TATCACAGTGGCTGGTTCTTT...............................2111.001.000.000.000.00
.....................................................................TATCACAGTGGCTGTTCCTTTT..............................2250.200.200.000.000.00
...........................TAAGGAAATAGTAGCCGTGA..........................................................................2011.000.000.000.001.00
..............................................ATTTTACCTATGATTTGTT........................................................1911.000.000.000.001.00
.....................................................................TATCACAGTTTCTGTTGCTTTT..............................2211.001.000.000.000.00
.....................................................................TATCACAGTGGCTGTTTCTTT...............................2150.200.200.000.000.00
..........................CTAAGGAAATAGTAGCCGTGA..........................................................................2111.000.000.000.001.00


droFic1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000453800:2313511-2313631 + 94.28
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGTATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGATTATTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATTC
SizeHit CountTotal Norm


droEug1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scf7180000409692:710064-710184 + 95.1
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCTTAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTTGATCC
SizeHit CountTotal Norm


droBia1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302402:8322793-8322912 + 95.89
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCATGCATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATC-
SizeHit CountTotal Norm


droTak1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scf7180000415380:1406182-1406305 - 92.1
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGAT---CC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCTTAGATCATCC
SizeHit CountTotal Norm


droEle1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000490995:508571-508691 - 96.72
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATATTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATCC
SizeHit CountTotal Norm


droRho1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scf7180000777158:16475-16595 - 93.47
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGCTCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATATTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCTTAGATTC
SizeHit CountTotal Norm


droKik1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302475:1425726-1425847 + 92.74
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCC-AAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCTCAGAATCTTTCCCATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATCT
SizeHit CountTotal Norm


droAna3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scaffold_13340:867356-867469 - 80.17
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATT-TTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
---------GATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCTCGAAGTCATTCCCATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATTT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..........................CTAAGGAAATAGTAGCCGTGA...........................................................................2115.005.000.000.000.00
...........................TAAGGAAATAGTAGCCGTGAT..........................................................................2115.004.000.001.000.00
..........................CTAAGGAAATAGTAGCCGTGAT..........................................................................2214.003.000.001.000.00
..........................CTAAGGAAATAGTAGCCGTG............................................................................2013.003.000.000.000.00
...........................TAAGGAAATAGTAGCCGTGA...........................................................................2012.002.000.000.000.00
......................................................................TATCACAGTGGCTGTTTTTTTT..............................2280.250.000.000.000.25
...........................TAAGGAAATAGTAGCCGTGATT.........................................................................2212.002.000.000.000.00
..........................CTAAGGAAATAGTAGCCGTGATT.........................................................................2312.002.000.000.000.00
..........................CTAAGGAAATAGTAGCCGTGTT..........................................................................2211.000.000.001.000.00
......................................................................TATCACAGTTGCTGTTCTTTTT..............................2280.130.000.130.000.00
....................................................................................................................ATATTT1830.330.000.000.000.33
.........................TCTAAGGAAATAGTAGCCGTGA...........................................................................2211.000.000.001.000.00
..........................CTAAGGAAATAGTAGCCGTGT...........................................................................2111.001.000.000.000.00
.........................TCTAAGGAAATAGTAGCCGTAA...........................................................................2211.001.000.000.000.00
...............................GATATGGTAGCCGTGAT..........................................................................1711.000.000.001.000.00
..........................CTAAGGAAATAGTAGCCGTGATTTT.......................................................................2511.001.000.000.000.00
.........................................................................CACAGTTGCTGTTTCTTTTAGAT..........................2311.000.001.000.000.00


droBip1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scf7180000394085:131779-131890 + 80.17
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
----------ATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAGAAGTCTTTCCCATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATTC
SizeHit CountTotal Norm
4 scf7180000396691:1654770-1654829 - 24.4
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTT--------TGTAAACAGCCTAGATCC
CCTCTCATGA----------------------------CGGTCGTGTTTTTGT---------------------------------------GTGAGTTCGTTCGAATACTTGGTGAAAGCCAAAAT--
SizeHit CountTotal Norm


dp4 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 chr2:7233487-7233613 - 80.42
CG------CGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
TGTCGCGTTGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTAACATACAAATCCTTTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATCG
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
................................CTAAGGAAATAGTAGCCGTGAT.........................................................................2219.009.000.000.000.00
................................CTAAGGAAATAGTAGCCGTGA..........................................................................2118.005.000.000.003.00
.................................TAAGGAAATAGTAGCCGTGAT.........................................................................2115.005.000.000.000.00
.................................TAAGGAAATAGTAGCCGTGATT........................................................................2215.004.000.000.001.00
...............................TCTAAGGAAATAGTAGCCGTGA..........................................................................2212.002.000.000.000.00
...........................................................................TATCACAGTTGCTGTTCTTTT...............................2190.220.000.220.000.00
...........................................................................TATCACAGTTGCTGTTCTTTTT..............................2290.220.000.220.000.00
...........................................................................TATCACAGATGCTGGTTCT.................................1911.000.001.000.000.00
..............................................................................CACAGTTGCTGTTTCTTTTAGAT..........................2311.000.001.000.000.00
................................CTAAGGAAATAGTAGCCGTGT..........................................................................2111.001.000.000.000.00
...........................................................................TATCACAGTGGCTGTTTTTTT...............................2190.110.000.110.000.00
.................................TAAGGAAATAGTAGCCGAGA..........................................................................2011.000.000.001.000.00
...............................TCTAAGGAAATGGTAGCCGTG...........................................................................2111.001.000.000.000.00
...........................................................................TATCACAGTAGCTGTTTTTT................................2090.110.000.110.000.00
...........................................................................TATCACAGTGGCTGTGTCTTTT..............................2211.000.001.000.000.00
...............................TCTAAGGAAATAGTAGCCGTG...........................................................................2111.001.000.000.000.00
.................................TAAGGAAATAGTAGCCGTGA..........................................................................2011.000.000.001.000.00
..............................................................................CACAGTTGCTGGTTCTTTTAGAT..........................2311.000.001.000.000.00


droPer1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 super_0:1094175-1094302 - 79.9
CG------CGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAA-TTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
TGTCGCGTTGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTAACATAACAAATCCTTTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAGATCG
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
................................CTAAGGAAATAGTAGCCGTGAT..........................................................................22110.007.000.002.000.001.00
............................................................................TATCACAGTGGCTGTTTTTTTT..............................2280.630.250.000.000.000.38
.................................TAAGGAAATAGTAGCCGTGAT..........................................................................2113.002.000.000.001.000.00
................................CTAAGGAAATAGTAGCCGTGA...........................................................................2112.001.000.001.000.000.00
.................................TAAGGAAATAGTAGCCGTGATT.........................................................................2212.001.000.000.001.000.00
.................................TAAGGAAATAGTAGCCGTGA...........................................................................2012.001.000.000.001.000.00
................................CTAAGGAAATAGTAGCCGTGT...........................................................................2111.001.000.000.000.000.00
................................CTAAGGAAATAGTAGCCGTGATT.........................................................................2311.000.000.000.001.000.00
...............................TCTAAGGAAATACTAGCCGTG............................................................................2111.001.000.000.000.000.00
................................CTAAGGAAATAGTAGCCGTGAC..........................................................................2211.000.000.000.000.001.00
...............................TCTAAGGAAATAGTAGCCGTGA...........................................................................2211.001.000.000.000.000.00
................................CTAAGGAAATAGTAGCCGTG............................................................................2011.000.000.001.000.000.00
................................CTAAGGAAATAGTAGCCGTGTT..........................................................................2211.000.000.000.001.000.00
............................................................................TATCACAGTTGCTGTTCTTTTT..............................2280.130.000.130.000.000.00
...............................TCTAAGGGAATAGTAGCCGTGA...........................................................................2211.001.000.000.000.000.00
..........................AGTTATCTAAGGAAATGGG...................................................................................1911.001.000.000.000.000.00


droWil1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
10 scaffold_181089:74381-74499 - 84.65
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC----CCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGA--CATGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAATTATTCA--AATCTTTGACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTAAA---
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.........................................................................TATCACAGTGGCTGTTTTTTTT..............................221021.500.0021.400.100.00
.........................................................................TATCACAGTGGCTGTTCCTTTT..............................221021.300.0021.300.000.00
..........................CTAAGGAAATAGTAGCCGTGAT.............................................................................222102.0042.505.501.0053.00
.........................................................................TATCACAGTTGCTGTTCTTTTT..............................221019.400.0019.400.000.00
...........................TAAGGAAATAGTAGCCGTGAT.............................................................................21259.0023.501.000.0034.50
.........................................................................TATCACAGTGGCTGTTCCTTT...............................21106.500.006.400.100.00
...........................TAAGGAAATAGTAGCCGTGATT............................................................................22230.0010.500.000.0019.50
.........................................................................TATCACAGTTGCTGTTCTTTT...............................21105.400.005.400.000.00
..........................CTAAGGAAATAGTAGCCGTGAC.............................................................................22219.503.500.000.0016.00
.........................................................................TATCACAGTGGCTGTTTTTTT...............................21102.400.002.400.000.00
..........................CTAAGGAAATAGTAGCCGTGA..............................................................................2128.507.500.000.001.00
...........................TAAGGAAATAGTAGCCGTGA..............................................................................2026.005.001.000.000.00
.........................TCTAAGGAAATAGTAGCCGTGA..............................................................................2226.003.500.000.002.50
.........................................................................TATCACAGTGGCTGTTTTT.................................19101.100.001.100.000.00
.........................................................................TATCACAGTGGCTGTTTTTT................................20100.900.000.900.000.00
.........................................................................TATCACAGTTGCTGTTCTTT................................20100.900.000.900.000.00
............................................................................CACAGTTGCTGTTTCTTTTAGAC..........................2324.000.000.000.004.00
............................................................................CACAGTTGCTGTTTCTTTTAGAT..........................2323.501.001.501.000.00
.........................................................................TATCACAGTTGCTGTTCTTTTTA.............................23100.600.000.600.000.00
.........................................................................TATCACAGTGGCTGTTCCTTTTA.............................23100.500.000.500.000.00
..........................CTAAGGAAATAGTAGCCGTGATT............................................................................2322.501.000.500.001.00
.........................................................................TATCACAGTGGCTGTTTTTTTTA.............................23100.500.000.500.000.00
..........................CTAAGGAAATAGTAGCCGTGACT............................................................................2322.000.000.000.002.00
...........................TAAGGAAATAGTAGCCGTGAC.............................................................................2122.000.000.000.002.00
.........................TCTAAGGAAATAGTAGCCGTGG..............................................................................2221.500.000.000.001.50
..........................CTAAGGAAATAGTAGCCGTGG..............................................................................2121.500.000.000.001.50
..........................CTAAGGAAATAGTAGCCGTG...............................................................................2021.501.000.000.500.00
.........................................................................TATCACAGTGGCTGTTCCTT................................20100.300.000.300.000.00
..........................CTAAGGAAATAGTAGCCGTGACC............................................................................2321.000.000.000.001.00
...........................TAAGGAAATAGTAGCCGTGATC............................................................................2221.000.000.000.001.00
..........................CTAAGGAAATAGTAGCCTTGAT.............................................................................2221.000.500.000.000.50
...........................TAAGGAAATAGTAGCCGTGG..............................................................................2021.000.000.000.001.00
..........................CTAATGAAATAGTAGCCGTGAC.............................................................................2221.000.000.000.001.00
.........................................................................TATCACAGTTGCTGTTCT..................................18100.200.000.200.000.00
.............................................................................ACAGTGGCTGTTTTTTTT..............................18100.200.000.200.000.00
.........................................................................TATCACAGTGGCTGTTTCTTT...............................21100.200.000.200.000.00
.........................................................................TATCACAGTGGCTGTTCCT.................................19100.200.000.200.000.00
.........................................................................TATCACAGTGGCTGTTTT..................................18100.200.000.200.000.00
.........................................................................TATCACAGTTGCTGTTCCTTT...............................21100.100.000.100.000.00
.........................................................................TATCACAGTGGCTGTTCC..................................18100.100.000.100.000.00
..........................................................................ATCACAGTTGCTGTTTCTTTT..............................2120.500.500.000.000.00
..........................CTAAGGAAATAGTAGCCCTGAC.............................................................................2220.500.000.000.000.50
...........................TAAGGAAATAGTAGCCGTG...............................................................................1920.500.500.000.000.00
..........................CTAAGGAAATAGTAGCCGTGATC............................................................................2320.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCGTGAG.............................................................................2220.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCG.................................................................................1820.500.000.000.000.50
...........................................................................TCACAGTTGCTGTTTCTTTTAG............................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGTTTCTTT...............................2120.500.500.000.000.00
...........................TAGGGAAATAGTAGCCGTGAT.............................................................................2120.500.000.000.000.50
.........................TCTAAGGAAATAGTAGCCGTGAT.............................................................................2320.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCGGGAT.............................................................................2220.500.000.000.000.50
...........................TAAGGAAATAGGAGCCGTGAT.............................................................................2120.500.500.000.000.00
...........................TAAGGAAATAGTAGCCGTGATTTTAAT.......................................................................2720.500.500.000.000.00
............................................................................CACAGATGCTGTTTCTTTTAGAT..........................2320.500.000.000.500.00
.........................................................................TATCACAGTGGCTGGTTCTTT...............................2120.500.000.500.000.00
..........................TTAAGGAAATAGTAGCCGTGAT.............................................................................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGTTTCTTTTA.............................2320.500.500.000.000.00
..........................................................................ATCACAGTGGCTGTTTTTTTT..............................21100.100.000.100.000.00
...........................TAAGGAAATAGTAGCCGTGATTG...........................................................................2320.500.500.000.000.00
...........................TAACGAAATAGTAGCCGTGATT............................................................................2220.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCGTGGT.............................................................................2220.500.500.000.000.00
..........................CTAAGGAAATATTAGCCGTGAT.............................................................................2220.500.500.000.000.00
...........................TAAGGAAATAGTAGCCTTGATT............................................................................2220.500.500.000.000.00
..........................CTAAGGAAATATTAGCCGTGAC.............................................................................2220.500.000.000.000.50
..........................CTAAGGAAATAGTAGCTGTGAT.............................................................................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGxTTCTTTTAA............................2320.500.000.500.000.00
...........................TAAGGAAATAATAGCCGTGATT............................................................................2220.500.000.000.000.50
.........................TCTAAGGACATAGTAGCCGTGA..............................................................................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGTTTCTTTT..............................2220.500.500.000.000.00
............................AAGGAAATAGTAGCCGTGATTT...........................................................................2220.500.500.000.000.00
.........................TCTAAGGAAATAGCAGCCGTGA..............................................................................2220.500.500.000.000.00
3 scaffold_181108:495-611 + 82.42
CGCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC----CCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CGA--CATGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAATTATTCA--AATCTTTGACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCTA-----
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.........................................................................TATCACAGTGGCTGTTTTTTTT..............................221021.500.0021.400.100.00
.........................................................................TATCACAGTGGCTGTTCCTTTT..............................221021.300.0021.300.000.00
..........................CTAAGGAAATAGTAGCCGTGAT.............................................................................222102.0042.505.501.0053.00
.........................................................................TATCACAGTTGCTGTTCTTTTT..............................221019.400.0019.400.000.00
...........................TAAGGAAATAGTAGCCGTGAT.............................................................................21259.0023.501.000.0034.50
.........................................................................TATCACAGTGGCTGTTCCTTT...............................21106.500.006.400.100.00
...........................TAAGGAAATAGTAGCCGTGATT............................................................................22230.0010.500.000.0019.50
.........................................................................TATCACAGTTGCTGTTCTTTT...............................21105.400.005.400.000.00
..........................CTAAGGAAATAGTAGCCGTGAC.............................................................................22219.503.500.000.0016.00
.........................................................................TATCACAGTGGCTGTTTTTTT...............................21102.400.002.400.000.00
..........................CTAAGGAAATAGTAGCCGTGA..............................................................................2128.507.500.000.001.00
...........................TAAGGAAATAGTAGCCGTGA..............................................................................2026.005.001.000.000.00
.........................TCTAAGGAAATAGTAGCCGTGA..............................................................................2226.003.500.000.002.50
.........................................................................TATCACAGTGGCTGTTTTT.................................19101.100.001.100.000.00
.........................................................................TATCACAGTGGCTGTTTTTT................................20100.900.000.900.000.00
.........................................................................TATCACAGTTGCTGTTCTTT................................20100.900.000.900.000.00
............................................................................CACAGTTGCTGTTTCTTTTAGAC..........................2324.000.000.000.004.00
............................................................................CACAGTTGCTGTTTCTTTTAGAT..........................2323.501.001.501.000.00
.........................................................................TATCACAGTTGCTGTTCTTTTTA.............................23100.600.000.600.000.00
.........................................................................TATCACAGTGGCTGTTCCTTTTA.............................23100.500.000.500.000.00
..........................CTAAGGAAATAGTAGCCGTGATT............................................................................2322.501.000.500.001.00
.........................................................................TATCACAGTGGCTGTTTTTTTTA.............................23100.500.000.500.000.00
..........................CTAAGGAAATAGTAGCCGTGACT............................................................................2322.000.000.000.002.00
...........................TAAGGAAATAGTAGCCGTGAC.............................................................................2122.000.000.000.002.00
.........................TCTAAGGAAATAGTAGCCGTGG..............................................................................2221.500.000.000.001.50
..........................CTAAGGAAATAGTAGCCGTGG..............................................................................2121.500.000.000.001.50
..........................CTAAGGAAATAGTAGCCGTG...............................................................................2021.501.000.000.500.00
.........................................................................TATCACAGTGGCTGTTCCTT................................20100.300.000.300.000.00
..........................CTAAGGAAATAGTAGCCGTGACC............................................................................2321.000.000.000.001.00
...........................TAAGGAAATAGTAGCCGTGATC............................................................................2221.000.000.000.001.00
..........................CTAAGGAAATAGTAGCCTTGAT.............................................................................2221.000.500.000.000.50
...........................TAAGGAAATAGTAGCCGTGG..............................................................................2021.000.000.000.001.00
..........................CTAATGAAATAGTAGCCGTGAC.............................................................................2221.000.000.000.001.00
.........................................................................TATCACAGTTGCTGTTCT..................................18100.200.000.200.000.00
.............................................................................ACAGTGGCTGTTTTTTTT..............................18100.200.000.200.000.00
.........................................................................TATCACAGTGGCTGTTTCTTT...............................21100.200.000.200.000.00
.........................................................................TATCACAGTGGCTGTTCCT.................................19100.200.000.200.000.00
.........................................................................TATCACAGTGGCTGTTTT..................................18100.200.000.200.000.00
.........................................................................TATCACAGTTGCTGTTCCTTT...............................21100.100.000.100.000.00
.........................................................................TATCACAGTGGCTGTTCC..................................18100.100.000.100.000.00
..........................................................................ATCACAGTTGCTGTTTCTTTT..............................2120.500.500.000.000.00
..........................CTAAGGAAATAGTAGCCCTGAC.............................................................................2220.500.000.000.000.50
...........................TAAGGAAATAGTAGCCGTG...............................................................................1920.500.500.000.000.00
..........................CTAAGGAAATAGTAGCCGTGATC............................................................................2320.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCGTGAG.............................................................................2220.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCG.................................................................................1820.500.000.000.000.50
...........................................................................TCACAGTTGCTGTTTCTTTTAG............................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGTTTCTTT...............................2120.500.500.000.000.00
...........................TAGGGAAATAGTAGCCGTGAT.............................................................................2120.500.000.000.000.50
.........................TCTAAGGAAATAGTAGCCGTGAT.............................................................................2320.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCGGGAT.............................................................................2220.500.000.000.000.50
...........................TAAGGAAATAGGAGCCGTGAT.............................................................................2120.500.500.000.000.00
...........................TAAGGAAATAGTAGCCGTGATTTTAAT.......................................................................2720.500.500.000.000.00
............................................................................CACAGATGCTGTTTCTTTTAGAT..........................2320.500.000.000.500.00
.........................................................................TATCACAGTGGCTGGTTCTTT...............................2120.500.000.500.000.00
..........................TTAAGGAAATAGTAGCCGTGAT.............................................................................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGTTTCTTTTA.............................2320.500.500.000.000.00
..........................................................................ATCACAGTGGCTGTTTTTTTT..............................21100.100.000.100.000.00
...........................TAAGGAAATAGTAGCCGTGATTG...........................................................................2320.500.500.000.000.00
...........................TAACGAAATAGTAGCCGTGATT............................................................................2220.500.000.000.000.50
..........................CTAAGGAAATAGTAGCCGTGGT.............................................................................2220.500.500.000.000.00
..........................CTAAGGAAATATTAGCCGTGAT.............................................................................2220.500.500.000.000.00
...........................TAAGGAAATAGTAGCCTTGATT............................................................................2220.500.500.000.000.00
..........................CTAAGGAAATATTAGCCGTGAC.............................................................................2220.500.000.000.000.50
..........................CTAAGGAAATAGTAGCTGTGAT.............................................................................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGxTTCTTTTAA............................2320.500.000.500.000.00
...........................TAAGGAAATAATAGCCGTGATT............................................................................2220.500.000.000.000.50
.........................TCTAAGGACATAGTAGCCGTGA..............................................................................2220.500.500.000.000.00
.........................................................................TATCACAGTTGCTGTTTCTTTT..............................2220.500.500.000.000.00
............................AAGGAAATAGTAGCCGTGATTT...........................................................................2220.500.500.000.000.00
.........................TCTAAGGAAATAGCAGCCGTGA..............................................................................2220.500.500.000.000.00


droVir3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_13047:1194160-1194276 + 83.13
C--GCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
CCAGCGATTTTGATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACATTAGAAGCTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCT------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
............................CTAAGGAAATAGTAGCCGTGAT.........................................................................22140.003.0021.001.001.0014.00
.............................TAAGGAAATAGTAGCCGTGATT........................................................................22113.000.006.000.001.006.00
.............................TAAGGAAATAGTAGCCGTGAT.........................................................................21111.000.007.000.000.004.00
............................CTAAGGAAATAGTAGCCGTGA..........................................................................21110.000.007.001.000.002.00
...........................TCTAAGGAAATAGTAGCCGTGA..........................................................................2213.000.002.000.000.001.00
.............................TAAGGAAATAGTAGCCGTGA..........................................................................2012.000.002.000.000.000.00
.......................................................................TATCACAGTTGCTGTTTCTTTT..............................2212.000.002.000.000.000.00
............................CTAAGGAAATAGGAGCCGTGAT.........................................................................2212.000.002.000.000.000.00
............................CTAAGGAAATAGTAGCCG.............................................................................1811.000.000.000.000.001.00
............................CTAAGGAAATAGTAGCCGTG...........................................................................2011.000.001.000.000.000.00
.............................TAAGGAAATAGTAGCCGTGAAT........................................................................2211.001.000.000.000.000.00
...........................TCTAAGGAAATAGTAGCCGTG...........................................................................2111.000.001.000.000.000.00
............................CTAAGGAAATAGTAGCCGTGG..........................................................................2111.000.000.000.000.001.00
..........................................................................CACAGTTGCTGTTTCTTTTAG............................2111.000.001.000.000.000.00
............................CTAAGGAAATAGTAGCCGTGACC........................................................................2311.000.000.000.001.000.00
.............................TAAGGAAATAGTAGCGGTGCTT........................................................................2211.000.001.000.000.000.00
.........................................................................TCACAGTTGCTGTTTCTTTTAG............................2211.000.000.001.000.000.00
.......................................................................TATCACAGTTGCTGTTCTTTTT..............................2280.130.000.000.130.000.00
.......................................................................TATCACAGTTGCTGTTTCTTT...............................2111.000.000.001.000.000.00
.......................................................................TATCACAGAGGCTGTTTCT.................................1911.000.000.001.000.000.00
.......................................................................TATCACAGTGGCTGTTTTTTTT..............................2280.130.000.000.130.000.00
............................CTAAGGAAATAGTAGCCGTGATAA.......................................................................2411.000.001.000.000.000.00


droMoj3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_6540:5225156-5225284 + 68.33
C--------------GCGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACCCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAGCCTAGATCC
AGGTCTAACGTTGAAGCGATATCAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACATTTCAACCTATTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAGCCT------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
........................................CTAAGGAAATAGTAGCCGTGAT.........................................................................221331.00324.002.003.002.00
.........................................TAAGGAAATAGTAGCCGTGATT........................................................................221128.00123.004.001.000.00
.........................................TAAGGAAATAGTAGCCGTGAT.........................................................................21190.0088.001.001.000.00
........................................CTAAGGAAATAGTAGCCGTGA..........................................................................21161.0059.002.000.000.00
.......................................TCTAAGGAAATAGTAGCCGTGA..........................................................................22160.0058.002.000.000.00
.........................................TAAGGAAATAGTAGCCGTGA..........................................................................20146.0044.001.000.001.00
........................................CTAAGGAAATAGTAGCCGTGATT........................................................................23119.0019.000.000.000.00
......................................................................................CACAGTTGCTGTTTCTTTTAGAT..........................23113.0011.000.000.002.00
.......................................TCTAAGGAAATAGTAGCCGTG...........................................................................2114.004.000.000.000.00
.....................................................................................TCACAGTTGCTGTTTCTTTTAG............................2214.004.000.000.000.00
...................................................................................TATCACAGTTGCTGTTTCTTTT..............................2213.003.000.000.000.00
........................................CTAAGGAAATAGTAGCCGTGATTT.......................................................................2413.003.000.000.000.00
...................................................................................TATCACAGTTGCTGTTTCTTT...............................2113.003.000.000.000.00
...................................................................................TATCACAGTTGCTGTTTCTT................................2012.002.000.000.000.00
........................................CTAAGGAAATAGTAGCCGTGATC........................................................................2312.002.000.000.000.00
.........................................TAAGGAAATAGTAGCCGTGATTT.......................................................................2312.002.000.000.000.00
....................................................................................ATCACAGTTGCTGTTTCTTTTAG............................2312.001.000.000.001.00
........................................CTAAGGAAATAGTAGCCGTGAC.........................................................................2212.002.000.000.000.00
......................................................................................CACAGTTGCTGTTTCTTTTAG............................2112.001.000.001.000.00
.........................................TAAGGAAATAGTAGCCGTG...........................................................................1912.001.000.001.000.00
.........................................TAAGGAAATAGTAGCCGTGATC........................................................................2212.001.001.000.000.00
........................................CTAAGGAAATAGTAGCCGTGATTC.......................................................................2412.002.000.000.000.00
........................................CTAAGGAAATAGTAGCCGTG...........................................................................2012.002.000.000.000.00
.........................................CAAGGAAATAGTAGCCGTGATT........................................................................2211.001.000.000.000.00
........................................CTAAGGAAATAATAGCCGTGAT.........................................................................2211.001.000.000.000.00
........................................CTAAGGxAATAGTAGCCGTGAT.........................................................................2111.001.000.000.000.00
.......................................TCTAAGGAAATAGTAGCCGT............................................................................2011.001.000.000.000.00
.........................................TGAGGAAATAGTAGCCGTGATT........................................................................2211.001.000.000.000.00
.......................................TCTAAGGAAATAGTAGCCGTGAA.........................................................................2311.001.000.000.000.00
.....................................................................................TCACAGTTGCTGTTTCTTTTAGA...........................2311.000.000.001.000.00
........................................CTAAGGAAATAGTAGCCGTGACT........................................................................2311.001.000.000.000.00
........................................CTAAGGAAATAGTATCCGTGAT.........................................................................2211.001.000.000.000.00
.......................................TCTAAGGAAGTAGTAGCCGTG...........................................................................2111.001.000.000.000.00
........................................CTAAGGAAATAGAAGCCGTGA..........................................................................2111.001.000.000.000.00
.......................................................................................ACAGTTGCTGTTTCTTTTAGATT.........................2311.001.000.000.000.00
.........................................TAAGGAAATAGTAGCCGTGATA........................................................................2211.001.000.000.000.00
........................................CTAAGGAAATAGCAGCCGTGAT.........................................................................2211.001.000.000.000.00
...................................................................................TATCACAGTTGCTGCTTTTTT...............................2111.000.000.001.000.00
.....................................................................................TCACAGTTGCTGTTTCTTTT..............................2011.000.000.001.000.00
...................................................................................TATCACAGTTGCTGTTCTTTTTA.............................2340.250.000.000.000.25
.........................................TAAGGACATAGTAGCCGTGAT.........................................................................2111.001.000.000.000.00
.........................................AAAGGAAATAGTAGCCGTGAT.........................................................................2111.001.000.000.000.00
......................................................................................CACAGTTGCTGTATCTTTTAGATT.........................2411.001.000.000.000.00
...................................................................................TATCACAGTTGCTGTTCCTTCT..............................2211.000.000.000.001.00
.........................................TAAGGAAATAGTAGCCGCGAT.........................................................................2111.001.000.000.000.00
........................................CTAAGGAAATAGTAGCCGTAAT.........................................................................2211.001.000.000.000.00
........................................CTAAGGAAATAGTTGCCGTGAT.........................................................................2211.001.000.000.000.00
.........................................TAAGGAAATATTAGCCGTGAT.........................................................................2111.001.000.000.000.00
........................................CTAAGGAAATAGTAACCGTGAT.........................................................................2211.001.000.000.000.00
........................................CTAAGGAAGTAGTAGCCGTGATA........................................................................2311.001.000.000.000.00
........................................CTAAGCAAATAGTAGCCATGAT.........................................................................2211.000.000.001.000.00
.........................................TAAGAAAATAGTAGCCGTGATT........................................................................2211.001.000.000.000.00
........................................CTAAGGAAATAGTAGCCGTGCT.........................................................................2211.000.001.000.000.00
........................................CTAAGGAAATAGTAGCCGGGAT.........................................................................2211.000.001.000.000.00
...................................................................................TATCACTGTTGCTGTCTCTTTT..............................2211.000.000.000.001.00
.GTTCGAACGTTGAAGCGA....................................................................................................................1811.000.000.001.000.00
........................................CTAAGGAAGTAGTAGCCGTGA..........................................................................2111.001.000.000.000.00
.........................................TAAGGAAATAGTAGCCTTGAT.........................................................................2111.001.000.000.000.00
........................................CTAAGGAAATGGTAGCCGTGAT.........................................................................2211.001.000.000.000.00
...................................................................................TATCACAGTTGCTGTTCTTTTT..............................2240.250.000.000.000.25
...................................................................................TATCACAGTTGCTGxCTCTTTTA.............................2211.000.000.000.001.00
........................................CTAAGGAAATAGTAGCCGTGT..........................................................................2111.001.000.000.000.00
.......................................TTTAAGGAAATAGTAGCCGTGA..........................................................................2211.001.000.000.000.00
........................................CTAAGGAAATAGTACCCGTGAT.........................................................................2211.001.000.000.000.00
........................................CTAAGGAAATAGTAGCCGTGATG........................................................................2311.001.000.000.000.00
.........................................TAAGGAAATAGTAGCCCTGA..........................................................................2011.001.000.000.000.00
........................................CAAAGGAAATAGTAGCCGTGAT.........................................................................2211.001.000.000.000.00
........................................CTAAGGAAATAGTAGCCTTGAT.........................................................................2211.001.000.000.000.00
.....................................................................................TCACAGTTGCTGTTTCTTTTCG............................2211.000.000.001.000.00
.........................................TAATGAAATAGTAGCCGTGATT........................................................................2211.001.000.000.000.00
....................................................................................ATCACAGTTGCTGTTTCTTTT..............................2111.001.000.000.000.00
.........................................TAAGGAAATAGTAGCCGTGATTTC......................................................................2411.001.000.000.000.00
.GTTCGAACGTTGAAGCGAT...................................................................................................................1911.000.000.000.001.00
....................................................................................ATCACAGTTGCTGTTTCTTTTA.............................2211.000.000.000.001.00
.........................................TAAGGAAGTAGTAGCCGTGATT........................................................................2211.001.000.000.000.00


droGri2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_14906:5077444-5077577 - 67.6
CGCGTC------CTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--CCAAGAATTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAG-----CCTAGATCC
GATGACAATGATTTACATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTACATTTGAAACTCTCTTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAACAAACCCTAACTCC
SizeHit CountTotal NormV109
Male body
................................CTAAGGAAATAGTAGCCGTGAT................................................................................2211.001.00
.................................TAAGGAAATAGTAGCCGTGATT...............................................................................2211.001.00


Generated: 04/20/2012 at 05:21:18 EDT