dme-mir-983-2- 12- and 20-way alignments

dme-mir-983-2	chrX:4262516-4262614 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	antisense_to_intron

Legend:

   mature strand at position 4262573-4262594
   star strand at position 4262537-4262558
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chrX:4262501-4262629 -	ATTATATGCATATGCTATTATATTGCAATA-ATTAAATAATACGTTTCGAACTA-ATGATTTTCAGTTCATTCATTAGGTAGTTACGCATTATCTAGTTGTTGTAAACATTCAA---CTCGATGGCGGATGAGA
droSim1	chrX:3277329-3277434 -	-T---------------------TGCAGTA-ATTTAGTAATACCTTTCGAACAC-ATGATTTTCAG-TCATTCATGAGTTCGTCAGGTATTATCTAGTTATTGTAAACATTCAA---CTCGCTGGCGGATGAGG
droSec1	Unknown	GT---------------------TGCAGTA-ATTTAGTAATACCTTTCGAACAT-ATGATTTTCAG-----------------TAGGTATTATCTAGTTATTGTAAACATTCAA---CTCGCTGGCGGATGAGG
droYak2	Unknown	--------------------------------------------------------------------------------------------------------------------------------------
droEre2	scaffold_4690:1633107-1633169 -	C--------------------------------------------------------------------ATTCATAAATGCGAAACGGATTATTAAGTTATTGTTAACATTCAA---CTCGTTGGCGTGTGAGA
droAna3	Unknown	--------------------------------------------------------------------------------------------------------------------------------------
dp4	Unknown	--------------------------------------------------------------------------------------------------------------------------------------
droPer1	Unknown	--------------------------------------------------------------------------------------------------------------------------------------
droWil1	Unknown	--------------------------------------------------------------------------------------------------------------------------------------
droVir3	Unknown	--------------------------------------------------------------------------------------------------------------------------------------
droMoj3	scaffold_6540:31110074-31110202 -	AC-----GTCTGTGTTATTTTTTTGAAGAGAACCAATTAAACAGTTCTCAGTTAAATAAACATTTGAGTATTTATTACCTATTTTAAAGTTAATTAAATGTTCCATATAATTAACTACCATTTTACAGCTGATA
droGri2	Unknown	--------------------------------------------------------------------------------------------------------------------------------------

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chrX:4262501-4262629 -	NA	ATTATATGCATATGCTATTATATTG-----------------------------CAATAATTAAATAATACGTTTCGAA---------------------CTAATGATTTTCAGTTCATTCATTAGGTAGTTACGCATTATCTAGT-----------------------------------------------------TG------------------------------------------TTGTAAACATTCAACT---CGATGGCGGATGAGA
droSim1	chrX:3277361-3277447 -	3	TGCAT------ATGA---TATCTTG-----------------------------CAGTAATTTAGTAATACCTTTCGAA---------------------CACATGATTTTCAG-TCATTCATGAGTTCGTCAGGTATTATCTAGT-----------------------------------------------------T-----------------------------------------------------------------------------
droSec1	super_4:2462215-2462301 +	2	TGCAT------ATGA---TATGTTG-----------------------------CAGTAATTTAGTAATACCTTTCGAA---------------------CATATGATTTTCAG-TCATTCATGAGTTCGTTAGGTATTATCTAGT-----------------------------------------------------T-----------------------------------------------------------------------------
droYak2	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2	scaffold_4690:1633107-1633226 -	2	GTGTG---------ATATTATGTTA-----------------------------CAGTGATTTAATAATTCGATTCGAA---------------------GTTATGTGCTTTAA-TCATTCATAAATGCGAAACGGATTATTAAGT-----------------------------------------------------TA------------------------------------------TTGTTAACATTCAACT---CGTTGGCGTGTGAGA
droEug1	scf7180000409076:263073-263186 -	2	TTTCAAAAACTA-----------TACGA-------------GACCTTTCAGTTTCGTTAACTAAACAATTCAAACTGGA-TA------------------ACTGAGTGTGTTAAATAATTCAATTATTCAGTTTGAATTTGGAAGT-----------------------------------------------------CG------------------------------------------ATGTAA-------------------------ACA
droBia1	scf7180000301703:495285-495387 +	2	ATCACTTGTATGTGATATTACAGTC-----------------------------C----A-----TAAAATGTTTCGTA---------------------TTATTAAAT------------------------------------------------------------------------------------------TGAGGTCAACATATTGCCATCTTAATTAGAGACCCTAAAAGTTCTACCAA-------------------------GTA
droTak1	scf7180000415394:1159774-1159904 +	2	ATCTCGTGATTTTTACGACATGCTC-----------------------------CCATGATTTAATAGTTTGTGCCATA---------------------TT-AAATG------------------------------------------------------TTAATTTATATTCATTTTATGACTCGAACTATTGAATCAATGTTG--------------------------------------GCATACTATCATCC---CAAGTTCAGACTCAA
droEle1	scf7180000491011:2112653-2112786 +	3	AGTTAACTAA-----------TTTGCAAAGATTTAATTTG--------------AAATACCATAAAAATTTAGGCACCAATATAAAAACATATTACGTTACATATGGTATTTAA-TTGTTTAATAT-------------------C-----------------------------------------------------AC------------------------------------------TTTTAAACATTTAGTT---TATAGGTTTATTCGC
droRho1	scf7180000779334:414542-414677 +	2	TTTGAAACGACA----------TCT-CA-------------CTAATTGCAGTCTTATTAAATGT-------------------------------------------------AGGTTTTTATAAT--------TCACTTTTATGTTTTTAATTTTTACATTTTAATCTGCCTTAATTTTGTGAGTTACAGTTTT---------------------------------AGAGT-CAAAATCT-ATAGCG-------------------------GGA
droFic1	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp4	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer1	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil1	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3	scaffold_6540:31110074-31110202 -	4	ACGTC-----TGTGTTATTTTTTTGAAGAGAACCAATTAAACAGTTCTCAGTTAAATA------------------------------------------------AACATTTGAGTATTTATTAC--------CTATTTTAAAGTTAATTAAA---------------------------------------------TG------------------------------------------TTCCATATAATTAACTACCATTTTACAGCTGATA
droGri2	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

ATTATATGCATATGCTATTATATTGCAATA-ATTAAATAATACGTTTCGAACTA-ATGATTTTCAGTTCATTCATTAGGTAGTTACGCATTATCTAGTTGTTGTAAACATTCAA---CTCGATGGCGGATGAGA

Size

Hit Count

Total Norm

droSim1

-T---------------------TGCAGTA-ATTTAGTAATACCTTTCGAACAC-ATGATTTTCAG-TCATTCATGAGTTCGTCAGGTATTATCTAGTTATTGTAAACATTCAA---CTCGCTGGCGGATGAGG	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
.........................................................................ATGAGTTCGTCAGGTATTATCT.......................................	22	3	574.33	0.00	33.33	409.67	131.33
.........................................................................ATGAGTTCGTCAGGTATTATC........................................	21	3	147.33	0.33	8.33	117.67	21.00
..........................................................................TGAGTTCGTCAGGTATTATCT.......................................	21	3	142.00	0.67	9.00	113.33	19.00
..........................................................................TGAGTTCGTCAGGTATTATCTA......................................	22	3	68.67	0.33	1.67	44.00	22.67
.........................................................................ATGAGTTCGTCAGGTATTATCC.......................................	22	3	27.33	0.00	2.33	18.33	6.67
...................................AGTAATACCTTTCGAACAC-ATGA...........................................................................	23	3	20.33	1.67	0.67	9.33	8.67
...................................AGTAATACCTTTCGAACAC-ATG............................................................................	22	3	18.67	2.67	0.67	14.33	1.00
...................................AGTAATACCTTTCGAACAC-AT.............................................................................	21	3	14.00	0.00	3.00	9.00	2.00
..........................................................................TGAGTTCGTCAGGTATTATC........................................	20	3	13.67	0.33	1.33	10.33	1.67
.........................................................................ATGAGTTCGTCAGGGATTATCT.......................................	22	3	10.33	0.00	0.33	9.00	1.00
..........................................................................TGAGTTCGTCAGGTATTATCTAA.....................................	23	3	10.33	0.00	0.00	5.33	5.00
.........................................................................ATGAGTTCGTCAGGTATTATCG.......................................	22	3	8.00	0.00	0.67	5.33	2.00
..........................................................................TGAGTTCGTCAGGTATTATCC.......................................	21	3	6.33	0.00	1.00	3.67	1.67
...................................AGTAATACCTTTCGAACAC-ATGAAA.........................................................................	25	3	5.67	0.33	0.00	3.33	2.00
...................................AGTAATACCTTTCGAACAC-ATGG...........................................................................	23	3	5.33	0.00	0.00	4.00	1.33
...................................AGTAATACCTTTCGAACAC-A..............................................................................	20	3	4.67	0.00	0.67	4.00	0.00
..........................................................................TGAGTTCGTCAGGTATTATCTAT.....................................	23	3	4.33	0.33	0.33	3.00	0.67
.........................................................................ATGAGTTCGTCAGGTATTATCTT......................................	23	3	4.00	0.00	0.00	4.00	0.00
...................................AGTAATACCTTTCGAACAC-ATGT...........................................................................	23	3	3.67	0.00	0.00	3.33	0.33
.........................................................................ATGAGTTCGTCAGGTATTATCTA......................................	23	3	3.33	0.00	0.00	3.00	0.33
...................................AGTAATACCTTTCGAACAC-ATGAT..........................................................................	24	3	2.67	0.00	0.67	2.00	0.00
.........................................................................ATGAGTTCGTCAGGGATTATC........................................	21	3	2.33	0.00	0.00	2.33	0.00
.........................................................................ATGAGTTCGTCAGGAATTATCT.......................................	22	3	2.33	0.00	0.00	2.33	0.00
..........................................................................TGAGTTCGTCAGGTATTATCTAAA....................................	24	3	1.67	0.00	0.00	1.33	0.33
.........................................................................ATGAGTTCGTCAGGTATTATCA.......................................	22	3	1.67	0.00	0.00	1.67	0.00
...................................AGTAATACCTTTCGAACAC-ATGAA..........................................................................	24	3	1.67	0.00	0.00	1.00	0.67
..........................................................................TGAGTTCGTCAGGTATTATCG.......................................	21	3	1.67	0.00	0.00	1.00	0.67
..........................................................................TGATTTCGTCAGGTATTATCT.......................................	21	3	1.33	0.00	0.00	0.33	1.00
.........................................................................ATGAGTTCGTCAGGAATTATC........................................	21	3	1.33	0.00	0.00	1.33	0.00
.........................................................................ATGAGTTCGTCAGGTATT...........................................	18	3	1.33	0.00	0.00	1.00	0.33
..........................................................................TGAGTTCGTCAGGGATTATCT.......................................	21	3	1.33	0.00	0.00	1.33	0.00
..........................................................................TGAGTTCGTCAGGTATTATCTAC.....................................	23	3	1.33	0.00	0.00	1.00	0.33
.........................................................................ATGAGTTCGTCAGGTATTAT.........................................	20	3	1.33	0.00	0.00	1.33	0.00
.........................................................................ATGAGTTCGTCAGGTATTATCTTT.....................................	24	3	1.33	0.00	0.00	1.33	0.00
.........................................................................ATGAGTTCGTCAxGTATTATC........................................	20	3	1.00	0.00	0.00	0.00	1.00
..........................................................................TGAGTTCGTCAGGTATTATCTG......................................	22	3	1.00	0.00	0.00	0.33	0.67
.........................................................................ATGATTTCGTCAGGTATTATCT.......................................	22	3	1.00	0.00	0.00	0.67	0.33
.........................................................................ATGAGTTCGTCAGGTATTA..........................................	19	3	1.00	0.00	0.00	1.00	0.00
.........................................................................ATGAGTTCGTCAGGCATTATCT.......................................	22	3	1.00	0.00	0.00	1.00	0.00
..........................................................................TGAGTTCGTCAGGTATTATCTTT.....................................	23	3	1.00	0.00	0.00	1.00	0.00

droSec1

GT---------------------TGCAGTA-ATTTAGTAATACCTTTCGAACAT-ATGATTTTCAG-----------------TAGGTATTATCTAGTTATTGTAAACATTCAA---CTCGCTGGCGGATGAGG	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
...................................AGTAATACCTTTCGAACAT-ATG............................................................................	22	3	2.33	2.00	0.33	0.00
...................................AGTAATACCTTTCGAACAT-AT.............................................................................	21	3	1.67	1.33	0.00	0.33
...................................AGTAATACCTTTCGAACAT-ATGT...........................................................................	23	3	0.67	0.67	0.00	0.00
.................................TTAGTAATACCTTTCGAACAT-...............................................................................	21	3	0.33	0.00	0.00	0.33
.................................TTAGTAATACCTTTCGAACAT-A..............................................................................	22	3	0.33	0.33	0.00	0.00

droYak2

--------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V046
Embryo

V052
Head

V120
Male body

V058
Head

M026
Head

droEre2

C--------------------------------------------------------------------ATTCATAAATGCGAAACGGATTATTAAGTTATTGTTAACATTCAA---CTCGTTGGCGTGTGAGA	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
............................................................................AATGCGAAACGGATTATTAAG.....................................	21	3	107.33	0.67	4.33	0.00	102.33
............................................................................AATGCGAAACGGATTATTAAGT....................................	22	3	97.33	4.33	2.67	0.00	90.33
............................................................................AATGCGAAACGGATTATTAA......................................	20	3	9.67	0.00	0.67	0.00	9.00
............................................................................AATGCGAAACGGATTATTAAGTT...................................	23	3	3.67	0.00	0.00	0.00	3.67
............................................................................AATGCGAAACGGATTATTAAA.....................................	21	3	3.33	0.00	0.00	0.00	3.33
............................................................................AATGCGAAACGGATTATTAAGA....................................	22	3	3.33	0.00	0.00	0.00	3.33
..........................................................................TAAATGCGAAACGGATTATTAA......................................	22	3	2.67	0.00	0.00	0.00	2.67
............................................................................AATGCGAAACGGATTATTAAGTA...................................	23	3	2.33	0.00	0.33	0.00	2.00
...........................................................................AAATGCGAAACGGATTATTAAG.....................................	22	3	2.00	0.33	0.00	0.00	1.67
..........................................................................TAAATGCGAAACGGATTATTAAA.....................................	23	3	2.00	0.00	0.00	0.00	2.00
............................................................................AATGCGAAACGGATTATT........................................	18	3	2.00	0.00	0.00	0.00	2.00
..........................................................................TAAATGCGAAACGGATTATTAAG.....................................	23	3	2.00	0.00	0.33	0.00	1.67
............................................................................AATGCGAAACTGATTATTAAGT....................................	22	3	1.67	0.00	0.00	0.00	1.67
............................................................................AATGCGAAACTGATTATTAAG.....................................	21	3	1.67	0.00	0.00	0.00	1.67
............................................................................AATTCGAAACGGATTATTAAG.....................................	21	3	1.67	0.00	0.00	0.00	1.67
...........................................................................CAATGCGAAACGGATTATTAAG.....................................	22	3	1.67	0.00	0.00	0.00	1.67
............................................................................AATGCTAAACGGATTATTAAGT....................................	22	3	1.33	0.00	0.00	0.00	1.33
............................................................................AATGCGAAACGGATTATTAAGTTT..................................	24	3	1.00	0.00	0.33	0.00	0.67
............................................................................AATGCGAAACGGATTATTAAGTAA..................................	24	3	1.00	0.00	0.00	0.00	1.00
............................................................................AATGCGAAACGTATTATTAAG.....................................	21	3	1.00	0.00	0.00	0.00	1.00
............................................................................AATGCTAAACGGATTATTAAG.....................................	21	3	0.67	0.00	0.00	0.00	0.67
............................................................................AATGCGAAACGGATTATTAAT.....................................	21	3	0.67	0.00	0.00	0.00	0.67
............................................................................AATACGAAACGGATTATTAAGT....................................	22	3	0.67	0.00	0.00	0.00	0.67
............................................................................AATGCGAAACGGATTGTTAAGT....................................	22	3	0.67	0.00	0.00	0.00	0.67
............................................................................AATTCGAAACGGATTATTAAGT....................................	22	3	0.67	0.00	0.00	0.00	0.67
.............................................................................ATGCGAAACGGATTATTAAG.....................................	20	3	0.67	0.00	0.00	0.00	0.67
............................................................................AATGCGAAACGGATTATTAATT....................................	22	3	0.67	0.00	0.33	0.00	0.33
............................................................................AATGCGAAACGGATTATTT.......................................	19	3	0.67	0.00	0.00	0.00	0.67
............................................................................AATGCGAAACGGATTATTAAGAA...................................	23	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTAAGTC...................................	23	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAACCGGCTTATTAAGT....................................	22	3	0.33	0.00	0.33	0.00	0.00
............................................................................AGTGCGAAACGGATTATTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAGACGGATTATTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGAGAAACGGATTATTAAG.....................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTAT......................................	20	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTAAGTTA..................................	24	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGCAACGGATTATTAAG.....................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAGCGGATTGTTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGxAACGGATTATTAAG.....................................	20	3	0.33	0.00	0.00	0.00	0.33
..........................................................................TAAATGCGAAACTGATTATTAAG.....................................	23	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACAGATTATTACG.....................................	21	3	0.33	0.00	0.33	0.00	0.00
............................................................................AATGCGAAACGTATTATTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................GATGCGAAACGGATTATTAAG.....................................	21	3	0.33	0.00	0.00	0.00	0.33
..........................................................................TAAATGCGAAACGGATTATT........................................	20	3	0.33	0.00	0.00	0.00	0.33
...........................................................................AAATGCGAACCGGATTATTAAG.....................................	22	3	0.33	0.33	0.00	0.00	0.00
............................................................................AATGCGAAACGGATTATTACG.....................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTACGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
...........................................................................AAATGCGAAGCGGATTATTAAG.....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCxAAACGGATTATTAAG.....................................	20	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAGGCGGATTATTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAGGCGGATTATTAA......................................	20	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGACTATTAA......................................	20	3	0.33	0.00	0.00	0.00	0.33
..........................................................................TAAATGCGAAACGGATTATTAAAA....................................	24	3	0.33	0.00	0.00	0.00	0.33
.............................................................................ATGCGAAACTGATTATTAAGT....................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACTGATTATTAAGTT...................................	23	3	0.33	0.00	0.00	0.00	0.33
...........................................................................AAATGCGAAACGGATTATTAAGT....................................	23	3	0.33	0.00	0.00	0.00	0.33
............................................................................ACTGCGAAACGGATTATTAAG.....................................	21	3	0.33	0.00	0.00	0.00	0.33
...........................................................................AAATGCGAAACGGATTATTA.......................................	20	3	0.33	0.00	0.33	0.00	0.00
...........................................................................AAATGCGAAACGGATTATTAA......................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACAGATTATTAAG.....................................	21	3	0.33	0.00	0.33	0.00	0.00
............................................................................AATGCGAAACGGATTATTAAGTAAA.................................	25	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACAGATTATTAAGT....................................	22	3	0.33	0.33	0.00	0.00	0.00
............................................................................AATGCGAAACGGGTTATTAAG.....................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTAAC.....................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTGAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTCTTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTAAGTG...................................	23	3	0.33	0.00	0.00	0.00	0.33
............................................................................AACGCGAAACGGATTATTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTAATAAA.....................................	21	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTTTTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAGCGGATTATTAAGT....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATTCGAAACGGATTATTAA......................................	20	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTAAGC....................................	22	3	0.33	0.00	0.00	0.00	0.33
............................................................................AATGCGAAACGGATTATTA.......................................	19	3	0.33	0.00	0.00	0.00	0.33

droAna3

--------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V105
Male body

V106
Head

V055
Unknown

V039
Embryo

dp4

--------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V112
Male body

V043
Embryo

V051
Head

M022
Male body

droPer1

--------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V111
Male body

V042
Embryo

V050
Head

V057
Head

M021
Embryo

droWil1

--------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V117
Male body

V118
Embryo

V119
Head

M020
Head

droVir3

--------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V116
Male body

V053
Unknown

V047
Embryo

M027
Male body

M028
Head

droMoj3

AC-----GTCTGTGTTATTTTTTTGAAGAGAACCAATTAAACAGTTCTCAGTTAAATAAACATTTGAGTATTTATTACCTATTTTAAAGTTAATTAAATGTTCCATATAATTAACTACCATTTTACAGCTGATA

Size

Hit Count

Total Norm

V110
Male body

V056
Unknown

V049
Head

V041
Embryo

droGri2

--------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V109
Male body

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image				None		None	None	None	None	None		None
UNAFold Image				None		None	None	None	None	None		None

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image				None							None	None	None	None	None	None	None	None		None
UNAFold Image				None							None	None	None	None	None	None	None	None		None