Possible Orthologs for dme-mir-976

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	chrX:15018511-15018617 +	62.38	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCAC--CTAACAACATCGCGCCGG A----------------------TGCAGTGTCGTGGCATTGGTGAGGACATCTCCAATGGATTGGTTCTCATCATTGGATTAGTTATCATCAATGCCGGTGCACTGCACTGCTGTCAACTTCGCGCAAT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..........................................................................TTGGATTAGTTATCATCAATGCC................................ 23 1 999.00 0.00 36.00 958.00 5.00 ..........................................................................TTGGATTAGTTATCATCAATG.................................. 21 1 29.00 0.00 2.00 27.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGC................................. 22 1 22.00 0.00 1.00 21.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGCCT............................... 24 1 13.00 0.00 1.00 12.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGAC................................ 23 1 9.00 0.00 0.00 9.00 0.00 ...........................................................................TGGATTAGTTATCATCAATGCC................................ 22 1 3.00 0.00 0.00 3.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGCCC............................... 24 1 2.00 0.00 0.00 2.00 0.00 ..........................................................................TTGGATTAGTTATCATCAA.................................... 19 1 2.00 0.00 0.00 2.00 0.00 ......................................TTGGTGAGGTCGTCTCCA......................................................................... 18 1 2.00 0.00 0.00 2.00 0.00 ..........................................................................TTGGATTAGTTATCATTAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGGTTAGTTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGCCA............................... 24 1 1.00 0.00 0.00 1.00 0.00 .......................................................................................................CTGCAxTGCTGTCACCTTCGC..... 20 1 1.00 0.00 0.00 0.00 1.00 ....................................CATTGGTGAGGACATCTC........................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAATTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGCTTAGTTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ....................................CATTGGTGAGGACATCTCCA......................................................................... 20 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGACTAGTTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 .....................................................................................................CACTGCAxTGCTGTCACCTT........ 19 1 1.00 0.00 0.00 0.00 1.00 ..........................................................................TTGGATTAGTTATCATCAGTGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTATCATCA..................................... 18 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGCT................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TCGGATTAGTTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGTC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTGGTTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ..............................................................................ATTAGTTATCATCAATGCCGGAT............................ 23 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTATAATCAATGC................................. 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATCAGTTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00 ....................................CATTGGTGAGGACATCTCT.......................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ............................................................ATTGGxTCTGATCATTGGA.................................................. 18 1 1.00 0.00 0.00 0.00 1.00 ..........................................................................TTGGATTAGGTATCATCAATGCC................................ 23 1 1.00 0.00 0.00 1.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	super_8:1735239-1735349 +	67.21	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG TCCG-----------------CATGCAGTGCCGTGGCATTGGTGAGGACATCTCCAATGGCTTAGTTCTCATCATTGGATTAGTTATCATCAATGCCGGTGCACTGCAGCTGTCAACTTCGCGCAAT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................................................................TTGGATTAGTTATCATCAATGCC.............................. 23 1 35.00 25.00 5.00 5.00 ..........................................................................TTGGATTAGTTATCATCAATGC............................... 22 1 26.00 20.00 1.00 5.00 ...........................................................................TGGATTAGTTATCATCAATGCC.............................. 22 1 7.00 5.00 1.00 1.00 ..........................................................................TTGGATTAGTTATCATCAATG................................ 21 1 6.00 4.00 1.00 1.00 ...........................................................................TGGATTAGTTATCATCAATGC............................... 21 1 2.00 1.00 1.00 0.00 ..........................................................................TTGGATTATTTATCATCAATGC............................... 22 1 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGCA.............................. 23 1 1.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGCT.............................. 23 1 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTATCATCACTGCC.............................. 23 1 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTATCATCAATGCCT............................. 24 1 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTATCCTCAAT................................. 20 1 1.00 1.00 0.00 0.00 ...........................................................................GAGATTAGTTATCATCAATGCC.............................. 22 1 1.00 0.00 0.00 1.00 ..........................................................................TTGGATTAGTTATCATCAATGCAA............................. 24 1 1.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTATCATCACTGC............................... 22 1 1.00 1.00 0.00 0.00

droYak2 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
81	chrX:11885798-11885920 -	75.93	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGG--ATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG AGAGGTG--AGTGAGAATCG-CATGCAGTGCCACGACATTGGTGAGGGCATCTCCAATGGGGACCCG---GCATCATTGGATTAGTTCTCATTAATGCCGGAGCACTGCACCTACCAACTTCGCACGGT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ............................................................................TTGGATTAGTTCTCATTAATGC............................... 22 2 65.50 0.00 0.00 20.50 2.00 43.00 ......................................TTGGTGAGGGCATCTCCAATGG..................................................................... 22 2 32.50 0.00 0.00 31.50 1.00 0.00 ............................................................................TTGGATTAGTTCTCATTAATG................................ 21 2 28.50 0.00 0.50 24.00 0.50 3.50 ............................................................................TTGGATTAGTTCTCATTAAT................................. 20 2 11.00 0.00 0.00 3.00 0.00 8.00 ............................................................................TTGGATTAGTTCTCATTAATGCC.............................. 23 2 8.00 0.00 0.00 0.00 0.00 8.00 ......................................TTGGTGAGGGCATCTCCAATG...................................................................... 21 2 7.50 0.00 0.00 7.00 0.50 0.00 ............................................................................TTGGATTAGTTCTCATTAATGCT.............................. 23 2 4.00 0.00 0.00 0.50 0.00 3.50 ...........................................................................ATTGGATTAGTTCTCATTAATG................................ 22 2 2.50 0.00 0.00 2.00 0.00 0.50 ...........................................................................ATTGGATTAGTTCTCATTAAT................................. 21 2 2.50 0.00 0.00 1.00 0.50 1.00 .....................................ATTGGTGAGGGCATCTCCAATG...................................................................... 22 2 1.50 0.00 0.00 1.00 0.50 0.00 .....................................ATTGGTGAGGGCATCTCCAAT....................................................................... 21 2 1.00 0.00 0.00 0.50 0.50 0.00 .................TCG-CATGCAGTGCCACGAC............................................................................................ 19 2 1.00 0.00 0.00 0.00 0.00 1.00 ............................................................................TTGGATTAGTTCTCATTAATGCCT............................. 24 2 0.50 0.00 0.00 0.00 0.00 0.50 ............................................................................TTGGATTAGTTCTCATTAATTC............................... 22 2 0.50 0.00 0.00 0.00 0.50 0.00 ............................................................................TTGGATTAGGTCTCATTAATGC............................... 22 2 0.50 0.00 0.00 0.00 0.00 0.50 ...........................................................................ATTGGATTAGTTCTAATTAAT................................. 21 2 0.50 0.00 0.00 0.00 0.00 0.50 ............................................................................TTGGATTAGTTCTCTTTACT................................. 20 2 0.50 0.00 0.00 0.00 0.50 0.00 ............................................................................TTGGATTAGTTCTCATTAATGT............................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 ....................................CATTGGTGAGGTCGTCTCC.......................................................................... 19 2 0.50 0.00 0.50 0.00 0.00 0.00 ............................................................................TTGGATTAGTTCTCATCGATG................................ 21 2 0.50 0.00 0.00 0.50 0.00 0.00 ............................................................................TTGGATTAGTTCCCATTAATGCT.............................. 23 2 0.50 0.00 0.00 0.00 0.00 0.50 ............................................................................TTGGATTAATTCTCATTAAT................................. 20 2 0.50 0.00 0.00 0.00 0.00 0.50 .....................................ATTGGTGAGGTCGTCTCCA......................................................................... 19 2 0.50 0.00 0.50 0.00 0.00 0.00 ............................................................................TTGGATTAGTTCACATTAATGC............................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 .....................................ATTGGTGAGGGCATCTCCAATA...................................................................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 ............................................................................TTGGATTAGTTCTCTTTAATGCT.............................. 23 2 0.50 0.00 0.00 0.00 0.50 0.00 ...................................ACATTGGTGAGGTCGTCTCC.......................................................................... 20 2 0.50 0.00 0.00 0.50 0.00 0.00 ......................................TTGGTGAGGGCATCTCCAATGA..................................................................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 ............................................................................TTGGATTCGTTCTCATTAATG................................ 21 2 0.50 0.00 0.00 0.50 0.00 0.00 .....................................ATTGGTGAGGGCATCTCCTT........................................................................ 20 2 0.50 0.00 0.00 0.50 0.00 0.00 ...........................................................................ATTGGATTAGTTCTCATTAATGA............................... 23 2 0.50 0.00 0.00 0.50 0.00 0.00 ...........................................................................CTTGGATTAGTTCTCATTAATGC............................... 23 2 0.50 0.00 0.00 0.50 0.00 0.00
83	chrX:11885798-11885920 -	75.93	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGG--ATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG AGAGGTG--AGTGAGAATCG-CATGCAGTGCCACGACATTGGTGAGGGCATCTCCAATGGGGACCCG---GCATCATTGGATTAGTTCTCATTAATGCCGGAGCACTGCACCTACCAACTTCGCACGGT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ............................................................................TTGGATTAGTTCTCATTAATGC............................... 22 2 65.50 0.00 0.00 20.50 2.00 43.00 ......................................TTGGTGAGGGCATCTCCAATGG..................................................................... 22 2 32.50 0.00 0.00 31.50 1.00 0.00 ............................................................................TTGGATTAGTTCTCATTAATG................................ 21 2 28.50 0.00 0.50 24.00 0.50 3.50 ............................................................................TTGGATTAGTTCTCATTAAT................................. 20 2 11.00 0.00 0.00 3.00 0.00 8.00 ............................................................................TTGGATTAGTTCTCATTAATGCC.............................. 23 2 8.00 0.00 0.00 0.00 0.00 8.00 ......................................TTGGTGAGGGCATCTCCAATG...................................................................... 21 2 7.50 0.00 0.00 7.00 0.50 0.00 ............................................................................TTGGATTAGTTCTCATTAATGCT.............................. 23 2 4.00 0.00 0.00 0.50 0.00 3.50 ...........................................................................ATTGGATTAGTTCTCATTAATG................................ 22 2 2.50 0.00 0.00 2.00 0.00 0.50 ...........................................................................ATTGGATTAGTTCTCATTAAT................................. 21 2 2.50 0.00 0.00 1.00 0.50 1.00 .....................................ATTGGTGAGGGCATCTCCAATG...................................................................... 22 2 1.50 0.00 0.00 1.00 0.50 0.00 .....................................ATTGGTGAGGGCATCTCCAAT....................................................................... 21 2 1.00 0.00 0.00 0.50 0.50 0.00 .................TCG-CATGCAGTGCCACGAC............................................................................................ 19 2 1.00 0.00 0.00 0.00 0.00 1.00 ............................................................................TTGGATTAGTTCTCATTAATGCCT............................. 24 2 0.50 0.00 0.00 0.00 0.00 0.50 ............................................................................TTGGATTAGTTCTCATTAATTC............................... 22 2 0.50 0.00 0.00 0.00 0.50 0.00 ............................................................................TTGGATTAGGTCTCATTAATGC............................... 22 2 0.50 0.00 0.00 0.00 0.00 0.50 ...........................................................................ATTGGATTAGTTCTAATTAAT................................. 21 2 0.50 0.00 0.00 0.00 0.00 0.50 ............................................................................TTGGATTAGTTCTCTTTACT................................. 20 2 0.50 0.00 0.00 0.00 0.50 0.00 ............................................................................TTGGATTAGTTCTCATTAATGT............................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 ....................................CATTGGTGAGGTCGTCTCC.......................................................................... 19 2 0.50 0.00 0.50 0.00 0.00 0.00 ............................................................................TTGGATTAGTTCTCATCGATG................................ 21 2 0.50 0.00 0.00 0.50 0.00 0.00 ............................................................................TTGGATTAGTTCCCATTAATGCT.............................. 23 2 0.50 0.00 0.00 0.00 0.00 0.50 ............................................................................TTGGATTAATTCTCATTAAT................................. 20 2 0.50 0.00 0.00 0.00 0.00 0.50 .....................................ATTGGTGAGGTCGTCTCCA......................................................................... 19 2 0.50 0.00 0.50 0.00 0.00 0.00 ............................................................................TTGGATTAGTTCACATTAATGC............................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 .....................................ATTGGTGAGGGCATCTCCAATA...................................................................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 ............................................................................TTGGATTAGTTCTCTTTAATGCT.............................. 23 2 0.50 0.00 0.00 0.00 0.50 0.00 ...................................ACATTGGTGAGGTCGTCTCC.......................................................................... 20 2 0.50 0.00 0.00 0.50 0.00 0.00 ......................................TTGGTGAGGGCATCTCCAATGA..................................................................... 22 2 0.50 0.00 0.00 0.50 0.00 0.00 ............................................................................TTGGATTCGTTCTCATTAATG................................ 21 2 0.50 0.00 0.00 0.50 0.00 0.00 .....................................ATTGGTGAGGGCATCTCCTT........................................................................ 20 2 0.50 0.00 0.00 0.50 0.00 0.00 ...........................................................................ATTGGATTAGTTCTCATTAATGA............................... 23 2 0.50 0.00 0.00 0.50 0.00 0.00 ...........................................................................CTTGGATTAGTTCTCATTAATGC............................... 23 2 0.50 0.00 0.00 0.50 0.00 0.00
38	chr3L:16664081-16664089 -	4.8	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG ----------------------------------------------------------------------------------------------------------------------TTGCACCGC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head	None	None

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scaffold_4690:9688892-9689017 +	72.08	AACGGCGGTG-GTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG TCCAGAGGTGTGCCAGAATCGC-ATGCAGTGCCTCGACATTGGTGAGGGCATCTCCAATGG-GGAGCCAGCATCATTGGATTAGTTCTCATTAATGCCGGAGCATGGCACCTACGAACTGAGCATTTG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...........................................................................TTGGATTAGTTCTCATTAATGC............................... 22 1 79.00 0.00 3.00 0.00 76.00 .......................................TTGGTGAGGGCATCTCCAATGG-.................................................................. 22 1 68.00 0.00 7.00 0.00 61.00 ...........................................................................TTGGATTAGTTCTCATTAATG................................ 21 1 12.00 0.00 1.00 0.00 11.00 .......................................TTGGTGAGGGCATCTCCAATG.................................................................... 21 1 12.00 0.00 1.00 0.00 11.00 ..........................................................................ATTGGATTAGTTCTCATTAAT................................. 21 1 10.00 0.00 0.00 0.00 10.00 ...........................................................................TTGGATTAGTTCTCATTAAT................................. 20 1 8.00 0.00 1.00 0.00 7.00 ......................................ATTGGTGAGGGCATCTCCAATG.................................................................... 22 1 5.00 0.00 0.00 0.00 5.00 ..........................................................................ATTGGATTAGTTCTCATTAATG................................ 22 1 3.00 0.00 0.00 0.00 3.00 ...........................................................................TTGGCTTAGTTCTCATTAATGC............................... 22 1 2.00 0.00 0.00 0.00 2.00 ......................................ATTGGTGAGGGCATCTCCAAT..................................................................... 21 1 2.00 0.00 0.00 0.00 2.00 .......................................TTTGTGAGGGCATCTCCAATGG-.................................................................. 22 1 2.00 0.00 0.00 0.00 2.00 .......................................TTGGTGATGGCATCTCCAATGG-.................................................................. 22 1 2.00 0.00 0.00 0.00 2.00 .......................................TTGGTGAGTGCATCTCCAATGG-.................................................................. 22 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTGGATTAGTTCTCATTAATGCT.............................. 23 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTGGGTTAGTTCTCATTAATGC............................... 22 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTGGATTAGTTCTCATTAATGCA.............................. 23 1 1.00 0.00 0.00 0.00 1.00 .......................................TTAGTGAGGGCATCTCCAATGG-.................................................................. 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................................ATTGGATTATTTCTCATTAATG................................ 22 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTGGATTATTTCTCATTAATGC............................... 22 1 1.00 0.00 0.00 0.00 1.00 .......................................TTGGTGAGGGCATCTxCAATGG-.................................................................. 21 1 1.00 0.00 0.00 0.00 1.00 .......................................TTGGTGCGGGCATCTACAATGG-.................................................................. 22 1 1.00 0.00 1.00 0.00 0.00 ...........................................TGAGGGCATCTCCAAGGC-.................................................................. 18 1 1.00 0.00 0.00 0.00 1.00 .......................................TTGGTGATGGCATCTCCAATG.................................................................... 21 1 1.00 0.00 0.00 0.00 1.00 .......................................TTGGCGAGGGCATCTCCAATG.................................................................... 21 1 1.00 0.00 0.00 0.00 1.00 .......................................TTGGTGAGGGCATCTCCAATGG-A................................................................. 23 1 1.00 0.00 0.00 0.00 1.00 .........................................GATGTGGGCATCTCCAATGG-.................................................................. 20 1 1.00 1.00 0.00 0.00 0.00 .......................................TTGGTGAGGGCAGCTCCAATG.................................................................... 21 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTGGATTAGTTCTCACTAATG................................ 21 1 1.00 0.00 0.00 0.00 1.00 .......................................TTGGTGAGGCCATCTCCAATGG-.................................................................. 22 1 1.00 0.00 0.00 0.00 1.00 .......................................TTGGTGAGGGAATCTCCAATGG-.................................................................. 22 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTGGATTAGTTCTCATTAATC................................ 21 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTAGATTAGTTCTCATTAATGC............................... 22 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................TTTGATTAGTTCTCATTAATGC............................... 22 1 1.00 0.00 0.00 0.00 1.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000454073:1733903-1734027 +	54.41	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTA-GTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACAT--------C---GCGCCGG ATCACCGCAGAC----A-------GCGGCGCCCCGCCATTAATAAGGACCTCTCCAATGGCAGACCGTCGAATCATTGGATTAGTTCTCATTAATGGTGGAGTGCCGCACCGACCACCACATTTTTTTCTAAG---TGC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
455	scf7180000409230:879657-879763 -	48.27	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTC-TCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAAC--ATCGCGCCGG A----------------------TGCAGCGCCTTGACATTGGCGAGGCCAACTCCAATGTCGAA--TCGAAATCATTGGATTAGTTCTCATCAATGACTGAGCCCTGTAATGACCAACGTACCATATCTT Size Hit Count Total Norm

droBia1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
35	scf7180000302069:1151015-1151142 -	67.38	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGC--GCCGG ATCAATGCTGGTGGGGATGAGGAAGCACCGCCTCGGCATTGGTGAGGGCACCTCCAATGG-CGAGCCGGCATCATTGGATTAGTTCTCATTAATGGCGGAGTGCTGCACCGACCAACGCCACATACGGT Size Hit Count Total Norm
6	scf7180000302087:312407-312466 +	28.8	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG TA---------------------------------------------------------AATTAGTTCTGAATTTCGAATTAAATTTTATCAAAATCGGACGACTATATCATATAGC---------- Size Hit Count Total Norm

droTak1 - 10 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
701	scf7180000415169:844814-844944 -	59.28	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCC-----GG TCTGGAGAGGAGGAGAAAGAGGAAGCATCGCCTCGACATTATTGAGGGCACCTCCAATGGC-GAGCCGACATCATTGGATTAGTTCTCATTAATGGCGGAGCGCTGCACTGACCAACTGTTCGTCCATAAGG Size Hit Count Total Norm
157	scf7180000414304:15841-15958 +	42.91	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG AGCTTCGGTGTTTTC---TGAAATATTACCTTCTACTTTTGGGGATGTAATTTTTTA---AATATTTCTGAATTTCGAATTAATTATTTAAAAAATCGGACTACTATATCATATAGCTG---CCATA Size Hit Count Total Norm
2	scf7180000410447:82816-82912 +	40.0	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCAT----CTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAA-----CAACATCGCGCCGG TA---------------------------------------GTGAGACCGTTTTCTTTCAAAATATTAGTAAGCAACAATGTTATAGCTTTCACAAAATCCATTTGAATAAAATTTGAAAATCACCATAGTACTCC Size Hit Count Total Norm
456	scf7180000411409:1006-1087 -	37.38	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG TA------------------------------------------ATACCTTCTGCAAGGGTATAATTATGTATTTTAAATTAG--ATTATCA-TAACAAAGCATCTCAATTTACAATATCTTTTCAG Size Hit Count Total Norm
222	scf7180000415204:12132-12196 +	26.79	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACAT--CGCGCCGG AGC---------------------------------------------------------------ACGCAACATCAAAATATTTGACAGCGA-GCCGTTATGCTGACATTGACGATGATCCGAGAAGA Size Hit Count Total Norm
148	scf7180000414216:6616-6661 +	19.17	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGC--ACTGCACCTAACAACATCGCGCCGG A---------------------------------------------------------------------------------GGTAGTATATATGTCGGAGCCGACCGGATCGGACAACTATA--TCTT Size Hit Count Total Norm
321	scf7180000415762:30544-30566 +	10.4	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG --------------------------------------------------------------------------------------------------------TGCATTTAATGGCAAAGCGTGGC Size Hit Count Total Norm
769	scf7180000415383:433601-433613 -	6.69	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG -----------------------------------------------------------------------------------------------------------------CCACAGTGCGCCA- Size Hit Count Total Norm	None	None
239	scf7180000415259:140212-140216 +	3.2	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG GCTGG-------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
398	scf7180000415985:8360-8365 +	3.2	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG CACCG-------------------------------------------------------------------------------------------------------------------------A Size Hit Count Total Norm	None	None

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000490751:1118774-1118889 +	58.46	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG ATCAAT-------ACCTGCACAAAGCATCGCCTCGCCATTGGTGAGGGCACCTCCAATGG-CGAGCCGGCTGCATTGGATTAGTTTTCATCAATGGCGGAGCCCTGCACTGACCA---GCAGACCGA Size Hit Count Total Norm

droRho1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
9	scf7180000761121:190087-190218 -	56.68	AACGGC-GGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACA---------------TCGCGCCGG AACCGCCTGCAAACAGCATC----------ACCTCGCCATTGGTGAGGGCATCTCCAATG-ACGAGTCGGCAGCATTGGATTAGTTCTCATTAATGGCGGAGCGGTGCACTGACCAGCAGACTGACCTCTCCGCTAGCACCAG Size Hit Count Total Norm
79	scf7180000780208:6991-7113 -	39.06	AACGGCGG--TGGTGGGCATCGCC----ATGCAGTGCCGCGGCA----------------------------TTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGC----------CGG TAGGTCGGATTGATTGGC-----CAAAAATGAAACCCATAGAAAATTCCAACTTCCTAACTCAACAAACACCAAAGTTATGGCATTTCCGATCAATCAGTTATA-------TGTTATA------------------------------------TAGTCGGCCGATCCTTA Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302517:1183679-1183793 +	53.49	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATG---------GATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTA-----ACAACATCGCGCCGG -------------------GCGAGGCATTGCCTCGCCATTGGTGAGAGCATCTCCAATGACGGCACTTGATT--------GCATTGGATTAGTTCTCATTGATGGCGGAGCATTGCACCTACTCCAGCAACGGCTATCCAG Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scaffold_13417:2467561-2467679 -	57.72	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGCGCCGG GCTACCGATGCT-----CCCCGAAGGAGCGCCTCGACATTGGTGAGTTCATCTCCAATGG-TCAGTAGCCCGCATTGGATTAGTTCTCATTGATGGCGAAGCG--AGTCCTACCCCCACACCAGCGA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..........................................................................TTGGATTAGTTCTCATTGATGG............................... 22 1 771.00 281.00 428.00 61.00 1.00 ..........................................................................TTGGATTAGTTCTCATTGATG................................ 21 1 289.00 168.00 104.00 17.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATGT............................... 22 1 62.00 47.00 14.00 1.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATGGT.............................. 23 1 33.00 14.00 18.00 1.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGAT................................. 20 1 18.00 13.00 1.00 4.00 0.00 .........................................................................ATTGGATTAGTTCTCATTGATG................................ 22 1 11.00 10.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATGGC.............................. 23 1 10.00 6.00 4.00 0.00 0.00 ..........................................................................TTTGATTAGTTCTCATTGATGG............................... 22 1 9.00 0.00 9.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATGGA.............................. 23 1 8.00 3.00 5.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATGGTT............................. 24 1 5.00 3.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATT................................ 21 1 4.00 2.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTAATTGATGG............................... 22 1 4.00 1.00 3.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATTG............................... 22 1 4.00 1.00 3.00 0.00 0.00 ..........................................................................TTGGATTAGCTCTCATTGATGG............................... 22 1 3.00 0.00 1.00 2.00 0.00 ..........................................................................TGGGATTAGTTCTCATTGATGG............................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCAGTGATGG............................... 22 1 3.00 3.00 0.00 0.00 0.00 .........................................................................ATTGGATTAGTTCTCATTGATGT............................... 23 1 3.00 3.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATA................................ 21 1 3.00 1.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTCCTCATTGATGG............................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTATCATTGATGG............................... 22 1 3.00 2.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATAG............................... 22 1 3.00 1.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTTATTGATGG............................... 22 1 2.00 0.00 1.00 1.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATCG............................... 22 1 2.00 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGGTGG............................... 22 1 2.00 0.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTTGTCATTGATGG............................... 22 1 2.00 2.00 0.00 0.00 0.00 ..........................................................................TTTGATTAGTTCTCATTGATG................................ 21 1 2.00 0.00 2.00 0.00 0.00 ..........................................................................TTGGTTTAGTTCTCATTGATGG............................... 22 1 2.00 0.00 0.00 2.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATC................................ 21 1 2.00 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTCATGG............................... 22 1 2.00 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTAATGC............................... 22 1 2.00 0.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTTCACATTGATGG............................... 22 1 2.00 1.00 1.00 0.00 0.00 ..........................................................................TTGGGTTAGTTCTCATTGATGG............................... 22 1 2.00 0.00 1.00 1.00 0.00 ..........................................................................TTGGATTAGCTCTCATTGATG................................ 21 1 2.00 0.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTAATGG............................... 22 1 2.00 1.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTTTCATTGATGG............................... 22 1 2.00 0.00 2.00 0.00 0.00 ..........................................................................TTGGATTAGTTATCATTGATGT............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGACTAGTTCTCATTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGCTTAGTTCTCATTGATGC............................... 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGGTTAGTTCTCATTGATGC............................... 22 1 1.00 0.00 0.00 1.00 0.00 .........................................................................ATTGGATTAGTTCTCATTGA.................................. 20 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTGGTTCTCATTGATG................................ 21 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TCGGATTAGTTCTCATTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTGTCATTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGATAT............................... 22 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGGATGAGTTCTCATTGATGG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATCGATGG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTGCTCATTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCACTGATGG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGCTGG............................... 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTCACATTGAT................................. 20 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTTATGGT.............................. 23 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGAxTAGTTCTCATTGATGG............................... 21 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGAGGG............................... 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTCTCCTTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGTTTAGTTCTCATTGATG................................ 21 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTTCCCATTGATGG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGA.................................. 19 1 1.00 1.00 0.00 0.00 0.00 ...................................................................GCCCGCACTGGATTATTT.......................................... 18 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................CTGGATTAGTTCTCATTGATGG............................... 22 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TCGGATTAGTTCTCATTGATGG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTATCATTGATG................................ 21 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGGATTACTTCTCATTGATGG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................................TTGATTAGTTCTCATTGATG................................ 20 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTxxTTCTCATTGATG................................ 19 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCACTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAATTCTCATTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTTGATTAGTTCTCATTGATGT............................... 22 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTTATGG............................... 22 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTTGATTAGTTCTCATTGATTG............................... 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGATTAGTACTCATTGATGG............................... 22 1 1.00 1.00 0.00 0.00 0.00 .........................................................................ATTGGATTAGTTCTCATTGATGA............................... 23 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGTATTAGTTCTCATTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATGGATGG............................... 22 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGCATTAGTTCTCATTGATG................................ 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGTTGG............................... 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TTGGCTTAGTTCTCATTGATGG............................... 22 1 1.00 0.00 0.00 1.00 0.00 .........................................................................ATTGGATTAGTTCTCATTGAT................................. 21 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................TTGGATTAGTCCTCATTGATG................................ 21 1 1.00 0.00 1.00 0.00 0.00 ..........................................................................TTGGATTAGTTCTCATTGTTG................................ 21 1 1.00 0.00 0.00 1.00 0.00 .........................................................................ATCGGATTAGTTCTCATTGATG................................ 22 1 1.00 1.00 0.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scf7180000395874:39930-40044 -	52.16	AACGGCGGTGGTGGGCATCGCCATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCA----CTGCACCTAACAACATCGCGCCGG GCTAGCGATG-----CTCCGTGAAGGAGCGCCTCGCCATTGGTGGGGGCGTCTCCAATGGC-CAGAAGCCCGCATTGGATTAGTTCTCATTAATGGCGAAGCGAGTCCT-TCCTCCACACCA--------- Size Hit Count Total Norm

dp4 - 0 hit found

droPer1 - 0 hit found

droWil1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scaffold_181096:7956743-7956912 +	33.74	A------------------ACGGCGGTGGTGGGCATCGCCAT-GCAGTGCCGCGGCATTGGTGAGG-CCATCTCCAATG-GATTAGTTCTCAACA---------TTGGATTAGTTATCATCAATGCCGGTGCACTGCACCTAACAACATCGC------------------GCCGG CTCTCCCCTTCCTTCTTACACAG---GATTATGTAGGATTATGGCAACACCTCGATATTGGTGAGTTCCAGCTCCAATGTTATTGGAGCCCAACATTGAACACATTGGATTAGTTCTCATCGATGGCGAAGTGTTT--GTGAGCAATATCGTATATTGTGCGTGCAGTGTATTGT Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ........................................................................................................TTGGATTAGTTCTCATCGATGG................................................. 22 1 427.00 241.00 27.00 83.00 76.00 ........................................................................................................TTGGATTAGTTCTCATCGATG.................................................. 21 1 155.00 116.00 2.00 5.00 32.00 ........................................................................................................TTGGATTAGTTCTCATCGAT................................................... 20 1 32.00 27.00 0.00 1.00 4.00 ........................................................................................................TTGGATTAGTTCTCATCGATGGT................................................ 23 1 13.00 3.00 2.00 5.00 3.00 ........................................................................................................TTGGATTAGTTCTCATCGA.................................................... 19 1 8.00 1.00 0.00 0.00 7.00 ........................................................................................................TTGGATTAGTTCTCATCGATGT................................................. 22 1 7.00 5.00 0.00 1.00 1.00 ........................................................................................................TTGGATTAGTTCTCATTGATGG................................................. 22 1 4.00 4.00 0.00 0.00 0.00 .......................................................................................................ATTGGATTAGTTCTCATCGATG.................................................. 22 1 4.00 3.00 0.00 0.00 1.00 ........................................................................................................TTGGATTAGTTCTCATCGG.................................................... 19 1 3.00 0.00 0.00 0.00 3.00 ........................................................................................................CTGGATTAGTTCTCATCGATGG................................................. 22 1 2.00 0.00 1.00 1.00 0.00 ........................................................................................................TTGGATTAGTTCCCATCGATGG................................................. 22 1 2.00 0.00 0.00 2.00 0.00 ........................................................................................................TTGGATTAGTTCTTATCGATGG................................................. 22 1 2.00 1.00 0.00 1.00 0.00 ...............................................................................TTATTGGAGCCCAACATTGAACACA....................................................................... 25 1 2.00 0.00 0.00 0.00 2.00 ........................................................................................................ATGGATTAGTTCTCATCGATGG................................................. 22 1 2.00 0.00 0.00 2.00 0.00 ........................................................................................................TTGGATTAATTCTCATCGATGG................................................. 22 1 2.00 1.00 1.00 0.00 0.00 ...........................................................................AAAGTTATTGGAGCCAAA.................................................................................. 18 1 2.00 0.00 2.00 0.00 0.00 ........................................................................................................TTGGGTTAGTTCTCATCGATGG................................................. 22 1 2.00 1.00 0.00 1.00 0.00 .......................................................................................................ATTGGATTAGTTCTCATCGAT................................................... 21 1 2.00 2.00 0.00 0.00 0.00 ........................................................................................................TTGGCTTAGTTCTCATCGATGG................................................. 22 1 1.00 0.00 0.00 1.00 0.00 ........................................................................................................TTTGATTAGTTCTCATCGATGG................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................................................AATTCTCATCGATGGCGT.............................................. 18 1 1.00 0.00 1.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCGATGC................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCGATAG................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTxGTTCTCATCGATG.................................................. 20 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCCATGG................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCGGTGG................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCGAGG.................................................. 21 1 1.00 0.00 0.00 0.00 1.00 ........................................................................................................TTAGATTAGTTCTCATCGATGG................................................. 22 1 1.00 0.00 0.00 0.00 1.00 ...........................................................GGTxAATTCCAGCTCCAAT................................................................................................. 18 1 1.00 0.00 1.00 0.00 0.00 ........................................................................................................TTGGATTAGTTATCATCGATGG................................................. 22 1 1.00 0.00 0.00 1.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCGACGG................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATTGATG.................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCGCATCGATGG................................................. 22 1 1.00 0.00 0.00 0.00 1.00 ........................................................................................................TTGCATTAGTTCTCATCGATGG................................................. 22 1 1.00 0.00 0.00 1.00 0.00 ........................................................................................................TTGGATTAGTTCTxATCGATGG................................................. 21 1 1.00 0.00 0.00 1.00 0.00 ................................................................................................................GTTTTCATCGATGCCGAAG............................................ 19 1 1.00 0.00 1.00 0.00 0.00 ........................................................................................................TTGGATTAGCTCTCATCGATGG................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................................................................................................................................TGT 19 2 0.50 0.50 0.00 0.00 0.00 .......................................................................................................ATTGGATTAGTTCTCATCGATGG................................................. 23 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTTGTTCTCATCGATG.................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTxxTTCTCATCGATGG................................................. 20 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCGATGGA................................................ 23 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGACTAGTTCTCATCGATG.................................................. 21 1 1.00 1.00 0.00 0.00 0.00 .........................................................................................................TGGATTAGTTCTCATCGATGG................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCAATGG................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCATCGATGA................................................. 22 1 1.00 1.00 0.00 0.00 0.00 .......................................................................................................ATTGGATTAGTTCTCATCGATGT................................................. 23 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................TTGGATTAGTTCTCGTCGATGG................................................. 22 1 1.00 0.00 0.00 1.00 0.00 ........................................................................................................TTGGATTAGTTCACATCGATGG................................................. 22 1 1.00 0.00 0.00 1.00 0.00

droVir3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
64	scaffold_13042:906708-906880 -	35.92	AACGGC--GGTGGTGGGCATCGCC----------------------------------ATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACC--TAACAACATC-------GCGCCGG----- ATCGTTATCGTTATCGTTATCGTTATCAGAATTAATTATCGTTGAAGTGCGTTCTTTGGTGCAGCCCCTCGCGATTGATGATAGCATCTCCAATGAG----CATATCACATTGGATTAGTTCTCATCGATGCCGATGCGCTGTACCAGCAACAACAACAGGAATAGCAACGGAAACA Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ..............................................................................................................TTGGATTAGTTCTCATCGATGCC............................................ 23 1 144.00 4.00 0.00 0.00 138.00 2.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGC............................................. 22 1 104.00 56.00 0.00 1.00 44.00 3.00 ..............................................................................................................TTGGATTAGTTCTCATCGATG.............................................. 21 1 97.00 77.00 0.00 0.00 20.00 0.00 ...............................................................................................................TGGATTAGTTCTCATCGATGCCG........................................... 23 1 27.00 24.00 1.00 0.00 2.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGCCC........................................... 24 1 19.00 1.00 0.00 0.00 18.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATC.............................................. 21 1 13.00 1.00 0.00 0.00 12.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGAT............................................... 20 1 12.00 11.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGCCT........................................... 24 1 9.00 0.00 0.00 0.00 9.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGA................................................ 19 1 8.00 1.00 0.00 0.00 7.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGCT............................................ 23 1 5.00 1.00 0.00 0.00 4.00 0.00 .......................................................................CGATTGATGATAGCATCTC....................................................................................... 19 1 4.00 0.00 0.00 0.00 4.00 0.00 .......................................................................CGATTGATGATAGCATCTCCAAT................................................................................... 23 1 3.00 1.00 0.00 1.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGCA............................................ 23 1 2.00 1.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGTC............................................ 23 1 2.00 1.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGTCC........................................... 24 1 2.00 0.00 0.00 0.00 2.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGAC............................................ 23 1 2.00 0.00 0.00 0.00 2.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGT............................................. 22 1 2.00 2.00 0.00 0.00 0.00 0.00 ..AGCTATCGTTATCGTTATC............................................................................................................................................................ 19 2 0.50 0.00 0.00 0.50 0.00 0.00 .................................................................................................................TATTAGTTCTCATCGATGCCG........................................... 21 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGG............................................. 22 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGCTCTCATCGATGC............................................. 22 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGCCG........................................... 24 1 1.00 0.00 0.00 0.00 1.00 0.00 .......................................................................CGATTGATGATAGCATCTCCA..................................................................................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGTTCTCGTCGATGC............................................. 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGCTCTCATCGATGCC............................................ 23 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCACCGATGC............................................. 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTATTTCTCATCGATC.............................................. 21 1 1.00 0.00 0.00 0.00 1.00 0.00 ATTGTTATCGTTATCGTTATC............................................................................................................................................................ 21 2 0.50 0.00 0.00 0.00 0.50 0.00 ..............................................................................................................TTGGATTAGTTCTCATAGATC.............................................. 21 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGAC............................................... 20 1 1.00 0.00 0.00 0.00 1.00 0.00 ........AGCTATCGTTATCGTTATC...................................................................................................................................................... 19 2 0.50 0.00 0.00 0.50 0.00 0.00 ...GCTATCGTTATCGTTATCGTTAT....................................................................................................................................................... 23 1 1.00 0.00 0.00 1.00 0.00 0.00 ...............................................................................................................TGGATTAGTTCTCATCGATGCCC........................................... 23 1 1.00 1.00 0.00 0.00 0.00 0.00 .............................................................................................................CTTGGATTAGTTCTCATCGATGC............................................. 23 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................................................................TGGATTAGTTCTCATCGATGC............................................. 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGATCTCATCGATGC............................................. 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCTATGCCC........................................... 24 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGGTCTCATCGATGCC............................................ 23 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCGATTC............................................. 22 1 1.00 0.00 0.00 1.00 0.00 0.00 .......................................................................CGATTGATGATAGCATCTCCAC.................................................................................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 .............................................................................................................ATTGGATTAGxTCTCATCC................................................. 18 1 1.00 0.00 0.00 0.00 0.00 1.00 ..............................................................................................................TTGGATTAGTTCTCATCGATGCTT........................................... 24 1 1.00 0.00 0.00 0.00 1.00 0.00 ......ATTGTTATCGTTATCGTTATC...................................................................................................................................................... 21 2 0.50 0.00 0.00 0.00 0.50 0.00 ..AGCTATCGTTATCGTTATCGTTA........................................................................................................................................................ 23 1 1.00 0.00 1.00 0.00 0.00 0.00 ...............................................................................................................TGTATTAGTTCTCATCGATGCCG........................................... 23 1 1.00 0.00 0.00 0.00 1.00 0.00 ..................................................................................................................ATTAGTTCTCATCGATGCCG........................................... 20 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATAGATG.............................................. 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCxATGCC............................................ 22 1 1.00 0.00 0.00 0.00 1.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCCATGC............................................. 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGTTCCCATCGATGCC............................................ 23 1 1.00 0.00 0.00 0.00 1.00 0.00 .......................................................................CGATTGATGATAGCATCTCCAA.................................................................................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCCATGCT............................................ 23 1 1.00 0.00 0.00 0.00 1.00 0.00 ...............................................................................................................TGGATTAGTTCTCATCGATGCCGTC......................................... 25 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGATCTCATCGAT............................................... 20 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTATTTCTCATCGATG.............................................. 21 1 1.00 0.00 0.00 0.00 1.00 0.00 ...............................................................................................................TGGATTAGTTCTCATCGATGCC............................................ 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................................................................TTGGATTAGTTCTCATCCATG.............................................. 21 1 1.00 1.00 0.00 0.00 0.00 0.00

droMoj3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
20	scaffold_6328:2900970-2901098 -	58.29	AACGGCGGTGGTGGGCATCGCC----ATGCAGTGCCGCGGCATTGGTGAGGCCATCTCCAATGGATTAGTTCTCAACATTGGATTAGTTATCATCAATGCCGGTGCACTGCACCT--AACAACATCGCGCCGG TATCGTTATCGCTAGCGACGCTTCGGGTGCAGCCCCTCGCGATTGATGAAAGCATCTCCAATG----AGTATTTCGCATTGGATTAGTTCTCATCGATGTCGATGCGCTGTATCAGCAACAACAACAACATGA Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ...............................................................................TGGATTAGTTCTCATCGATGTCG............................... 23 1 298.00 297.00 0.00 1.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGT................................. 22 1 185.00 180.00 2.00 2.00 1.00 .........................................ATTGATGAAAGCATCTCCAATG----.................................................................. 22 1 92.00 91.00 0.00 1.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATG.................................. 21 1 59.00 59.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTC................................ 23 1 39.00 38.00 1.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCGATGTC................................ 22 1 14.00 14.00 0.00 0.00 0.00 .........................................ATTGATGAAAGCATCTCCAATG----T................................................................. 23 1 10.00 9.00 1.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTT................................ 23 1 10.00 10.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCGATGT................................. 21 1 10.00 9.00 0.00 1.00 0.00 ................................................................................GGATTAGTTCTCATCGATGTCGTC............................. 24 1 9.00 9.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTCT............................... 24 1 7.00 7.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGAT................................... 20 1 6.00 6.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTTC............................... 24 1 5.00 5.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCGATGTCGTC............................. 25 1 4.00 4.00 0.00 0.00 0.00 .......................................CGATTGATGAAAGCATCTCCAAT....................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATTGATGG................................. 22 1 3.00 0.00 0.00 3.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTCG............................... 24 1 2.00 2.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCGATG.................................. 20 1 2.00 2.00 0.00 0.00 0.00 .........................................ATTGATGAAAGCATCTCCAATG----A................................................................. 23 1 2.00 2.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCGATGTCGT.............................. 24 1 2.00 2.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGC................................. 22 1 2.00 2.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTTT............................... 24 1 2.00 2.00 0.00 0.00 0.00 ...............................................................................TGAATTAGTTCTCATCGATGTCG............................... 23 1 2.00 2.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCGATGTCGC.............................. 24 1 2.00 2.00 0.00 0.00 0.00 ...............................................................................TGGATTATTTCTCATCGATGTCG............................... 23 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGGTGT................................. 22 1 1.00 0.00 0.00 1.00 0.00 ...............................................................................TGGATTAGTTCTCATCAATGTCG............................... 23 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTA................................ 23 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTCTC.............................. 25 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCTATGTCG............................... 23 1 1.00 1.00 0.00 0.00 0.00 .........................................ATTGATGAAAGCATCTCCACTG----.................................................................. 22 1 1.00 0.00 0.00 1.00 0.00 .........................................ATTGATGxAAGCATCTCCAATG----T................................................................. 22 1 1.00 1.00 0.00 0.00 0.00 .........................................ATTGATGAAAGCATCTCCAATG----TC................................................................ 24 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................TGGCTTAGTTCTCATCGATGTCG............................... 23 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGCTCTCATCGATGT................................. 22 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTTTCATCGATGT................................. 22 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCxTCGATGTCG............................... 22 1 1.00 1.00 0.00 0.00 0.00 .................................................................................................................CAGCAACAACAACATCATCA 22 4 0.25 0.00 0.00 0.00 0.25 ..............................................................................TTGGATTAGTCCTCATCGATGT................................. 22 1 1.00 1.00 0.00 0.00 0.00 .........................................ATTTATGAAAGCATCTCCAATG----.................................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTAATCGATGTC................................ 23 1 1.00 1.00 0.00 0.00 0.00 ..........................................TTGATGAAAGCATCTCCAATG----.................................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................TGGATTxxTTCTCATCGATGTCG............................... 21 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTCCTCATCGATGTCG............................... 23 1 1.00 1.00 0.00 0.00 0.00 ................................................................................GGATTAGTTCTCATCGATGTCG............................... 22 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTxGTTCTCATCGATGT................................. 21 1 1.00 1.00 0.00 0.00 0.00 .........................................ATTGATGAGAGCATCTCCAATG----.................................................................. 22 1 1.00 1.00 0.00 0.00 0.00 .........................................ATTGATGxAAGCATCTCCAATG----.................................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATAGATGT................................. 22 1 1.00 1.00 0.00 0.00 0.00 .........................................ATTGATGAAAGCATCTCCAATT----.................................................................. 22 1 1.00 1.00 0.00 0.00 0.00 .......................................CGATTGATGAACGCATCTCCAAT....................................................................... 23 1 1.00 0.00 0.00 1.00 0.00 .........................................ATTGATGAAAGCAxCTCCAATG----.................................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................TTGGATTAGTTCTCATCGATGTCC............................... 24 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................TGGATTAGTTCTCATCGATGTCT............................... 23 1 1.00 1.00 0.00 0.00 0.00 .......................................CGATTGATGAAAGCATCTCC.......................................................................... 20 1 1.00 0.00 1.00 0.00 0.00 ..............GGGACGCxTCGGGTGCA...................................................................................................... 16 1 1.00 0.00 1.00 0.00 0.00 .........................................ATTGATGAAAGCACCTCCAATG----.................................................................. 22 1 1.00 1.00 0.00 0.00 0.00

droGri2 - 0 hit found

Generated: 04/20/2012 at 05:30:07 EDT