Possible Orthologs for dme-mir-968

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2L:13506671-13506792 -	91.16	TCAAAGAA-AAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCAAAGAAAAAATTGTTCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCGTTTGATGTACTACTTTAGGAATCTACAGTCAAAGTCAACAT-TAAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...............................TAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 47580.00 25039.00 28.00 19.00 22494.00 .........................................................................ACCGTTTGATGTACTACTTTAG............................ 22 1 1619.00 307.00 1.00 2.00 1309.00 ...............................TAAGTAGTATCCATTAAAGGGTGG.................................................................... 24 1 1045.00 12.00 0.00 0.00 1033.00 ...............................TAAGTAGTATCCATTAAAGGGTT..................................................................... 23 1 578.00 545.00 0.00 0.00 33.00 ...............................TAAGTAGTATCCATTCAAGGGTTG.................................................................... 24 1 279.00 277.00 0.00 0.00 2.00 ...............................TAAGTATTATCCATTAAAGGGTTG.................................................................... 24 1 240.00 72.00 2.00 1.00 165.00 ...............................TAAGTAGTATCCATTAAAGGGGTG.................................................................... 24 1 232.00 218.00 0.00 0.00 14.00 ...............................TAAGTAGTATCCATTAAAGGGCTG.................................................................... 24 1 196.00 171.00 0.00 0.00 25.00 ..........................................................................CCGTTTGATGTACTACTTTAGG........................... 22 1 172.00 5.00 0.00 0.00 167.00 ...............................TAAGTAGTATCCATTAAAGGGTTT.................................................................... 24 1 160.00 155.00 0.00 0.00 5.00 ...............................TAAGTAGTATCCATTAAATGGTTG.................................................................... 24 1 149.00 31.00 0.00 0.00 118.00 ...............................TAAGTAGTATCCATTAACGGGTTG.................................................................... 24 1 115.00 114.00 0.00 0.00 1.00 ...............................TAAGTAGTATCCATTAAACGGTTG.................................................................... 24 1 104.00 42.00 0.00 0.00 62.00 ...............................TAAGTAGTATCCATTAAAGGGTTGT................................................................... 25 1 100.00 34.00 0.00 0.00 66.00 ...............................TAAGTAGTATCCATTAAAGGGT...................................................................... 22 1 97.00 51.00 0.00 0.00 46.00 ..............................TTAAGTAGTATCCATTAAAGGGTT..................................................................... 24 1 85.00 84.00 0.00 0.00 1.00 ...............................TAAGTAGTATACATTAAAGGGTTG.................................................................... 24 1 83.00 79.00 0.00 0.00 4.00 ...............................TAAGTAGTCTCCATTAAAGGGTTG.................................................................... 24 1 77.00 75.00 0.00 0.00 2.00 ...............................TAAGTAGTATCCATTAAAGTGTTG.................................................................... 24 1 77.00 41.00 0.00 0.00 36.00 ...............................TAAGTAGTATCCATTACAGGGTTG.................................................................... 24 1 76.00 76.00 0.00 0.00 0.00 .......................................................................CAACCGTTTGATGTACTACTTT.............................. 22 1 74.00 1.00 0.00 0.00 73.00 ...............................TAAGGAGTATCCATTAAAGGGTTG.................................................................... 24 1 71.00 54.00 0.00 0.00 17.00 ...............................TAAGTACTATCCATTAAAGGGTTG.................................................................... 24 1 62.00 4.00 0.00 0.00 58.00 ...............................TAAGTAGGATCCATTAAAGGGTTG.................................................................... 24 1 61.00 45.00 0.00 0.00 16.00 .........................................................................ACCGTTTGATGTACTACTTTA............................. 21 1 57.00 10.00 1.00 0.00 46.00 ...............................TAGGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 51.00 37.00 0.00 0.00 14.00 ...............................TAAGCAGTATCCATTAAAGGGTTG.................................................................... 24 1 50.00 37.00 0.00 0.00 13.00 ...............................TAAGTAGTATCCATTAAAGGTTTG.................................................................... 24 1 49.00 35.00 0.00 0.00 14.00 ...............................TAAGTAGTATCCATTTAAGGGTTG.................................................................... 24 1 48.00 44.00 0.00 0.00 4.00 ...............................TAAGTAGTACCCATTAAAGGGTTG.................................................................... 24 1 46.00 20.00 0.00 0.00 26.00 ...............................TAAGTAGTATACATTAAAGGGGTG.................................................................... 24 1 44.00 44.00 0.00 0.00 0.00 .........................................................................ACCGTTTGATGTACTACTTTAGA........................... 23 1 43.00 12.00 0.00 0.00 31.00 ...............................TAAGTAGTATCCATTGAAGGGTTG.................................................................... 24 1 43.00 39.00 0.00 0.00 4.00 ...............................TAATTAGTATCCATTAAAGGGTTG.................................................................... 24 1 42.00 3.00 0.00 0.00 39.00 ...............................TAAGTAGTATCCGTTAAAGGGTTG.................................................................... 24 1 41.00 35.00 0.00 0.00 6.00 ...............................TAAGTxxTATCCATTAAAGGGTTG.................................................................... 22 1 41.00 0.00 0.00 0.00 41.00 ..................................TAAGTATCCATTAAAGGGTTG.................................................................... 21 1 40.00 0.00 0.00 0.00 40.00 ...............................TAAGTAGTATCCATTAAAGG........................................................................ 20 1 40.00 18.00 0.00 0.00 22.00 ...............................TAAGTAGTATCCATTAAGGGGTTG.................................................................... 24 1 40.00 33.00 0.00 0.00 7.00 ................................AAGTAGTATCCATTAAAGGGTTG.................................................................... 23 1 39.00 25.00 0.00 0.00 14.00 ...............................TAAGTAGTATCCATTAAAGGTTG..................................................................... 23 1 39.00 1.00 0.00 1.00 37.00 ...............................TAAGTAGTATCCATTAAAGGGTTGA................................................................... 25 1 38.00 33.00 0.00 0.00 5.00 ...............................TAAGTAGTGTCCATTAAAGGGTTG.................................................................... 24 1 37.00 23.00 1.00 0.00 13.00 ...............................TAAGAAGTATCCATTAAAGGGTTG.................................................................... 24 1 37.00 31.00 0.00 0.00 6.00 ...............................TAAGTAGTATCCATTAAAGGGTCG.................................................................... 24 1 34.00 27.00 0.00 0.00 7.00 ...............................TAAGTGGTATCCATTAAAGGGTTG.................................................................... 24 1 31.00 24.00 0.00 0.00 7.00 ...............................TAAGTAGTATCCATTAGAGGGTTG.................................................................... 24 1 31.00 24.00 0.00 0.00 7.00 ...............................TAAGTAGTATCTATTAAAGGGTTG.................................................................... 24 1 30.00 28.00 0.00 0.00 2.00 ...............................TAAGTAGCATCCATTAAAGGGTTG.................................................................... 24 1 30.00 12.00 0.00 0.00 18.00 ...............................TAAGTAGTATTCATTAAAGGGTTG.................................................................... 24 1 30.00 25.00 0.00 0.00 5.00 ...............................TAAGTAGTATCCATTAAAGCGTTG.................................................................... 24 1 29.00 13.00 0.00 0.00 16.00 ...............................TAAGTAGTATCCATTAAAGAGTTG.................................................................... 24 1 29.00 17.00 0.00 0.00 12.00 ...............................TAAGTAGTATCCATTAAAAGGTTG.................................................................... 24 1 29.00 21.00 0.00 0.00 8.00 ...............................TAAGTAGTATCCATTAAAGGGTTA.................................................................... 24 1 29.00 16.00 0.00 0.00 13.00 ...............................TAAGTAGTATCCTTTAAAGGGTTG.................................................................... 24 1 27.00 25.00 0.00 0.00 2.00 ...............................TAAGTAGTATCCCTTAAAGGGTTG.................................................................... 24 1 26.00 25.00 0.00 0.00 1.00 ...............................TAAGTAGTATCCATTAAAGGGTTGC................................................................... 25 1 25.00 19.00 0.00 0.00 6.00 ...............................TAAGTAGTATGCATTAAAGGGTTG.................................................................... 24 1 21.00 21.00 0.00 0.00 0.00 ...............................CAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 21.00 18.00 0.00 0.00 3.00 ...............................TAAGTAGTATCAATTAAAGGGTTG.................................................................... 24 1 20.00 17.00 0.00 0.00 3.00 ...............................TAAGTAGTATCCACTAAAGGGTTG.................................................................... 24 1 20.00 14.00 0.00 0.00 6.00 ...............................TAAGTAGAATCCATTAAAGGGTTG.................................................................... 24 1 20.00 8.00 0.00 0.00 12.00 ...............................TAAGTAGTATCCATTAAAGGGTTC.................................................................... 24 1 20.00 16.00 0.00 0.00 4.00 ...............................TAAGTAGTATCCATCAAAGGGTTG.................................................................... 24 1 20.00 17.00 0.00 0.00 3.00 ...............................TAACTAGTATCCATTAAAGGGTTG.................................................................... 24 1 19.00 1.00 0.00 0.00 18.00 .................................AGTAGTATCCATTAAAGGGTTG.................................................................... 22 1 19.00 6.00 0.00 0.00 13.00 ...............................TAAGTAGTATCCATTTAAGGGGTG.................................................................... 24 1 19.00 19.00 0.00 0.00 0.00 ........................................................................AACCGTTTGATGTACTACTTTAG............................ 23 1 19.00 3.00 0.00 0.00 16.00 ..........................................................................CCGTTTGATGTACTACTTTAG............................ 21 1 19.00 3.00 0.00 0.00 16.00 ...............................TAAGTAGTATCCATTAAAGGGATG.................................................................... 24 1 18.00 12.00 0.00 0.00 6.00 ...............................TGAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 18.00 14.00 0.00 0.00 4.00 .........................................................................ACCGTTTGATGTACTACTTTAGC........................... 23 1 18.00 1.00 0.00 0.00 17.00 ...............................TAAGTAGTATCCATTAAAG......................................................................... 19 1 16.00 5.00 0.00 0.00 11.00 .........................................................................ACCGTTTGATGTACTACTTTAGAA.......................... 24 1 15.00 1.00 0.00 0.00 14.00 ...............................TAAGTAGTATCCATTAAAGGGGTT.................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 ...............................TAAGTAGTATCCATTAAAGGCTTG.................................................................... 24 1 15.00 9.00 0.00 0.00 6.00 ...............................GAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 15.00 12.00 0.00 0.00 3.00 ...............................TAAGTAxTATCCATTAAAGGGTTG.................................................................... 23 1 15.00 0.00 0.00 0.00 15.00 ...............................TAAGTAGTATCCATTCACGGGTTG.................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 ..............................CTAAGTAGTATCCATTAAAGGGTTG.................................................................... 25 1 15.00 14.00 0.00 0.00 1.00 ...............................TAAGTAGTCTCCATTCAAGGGTTG.................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 ...............................TCAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 14.00 14.00 0.00 0.00 0.00 ...............................TAAGTAATATCCATTAAAGGGTTG.................................................................... 24 1 13.00 11.00 0.00 0.00 2.00 ...............................TAAGGAGTATCCATTAAAGGGGTG.................................................................... 24 1 13.00 13.00 0.00 0.00 0.00 ...............................TAAGTAGTATCCATTAAAGGG....................................................................... 21 1 13.00 8.00 0.00 0.00 5.00 ...............................TAAGTAGTATCCATTACAGGGTT..................................................................... 23 1 12.00 12.00 0.00 0.00 0.00 ...............................TAAGTAGTATCCATTxAAGGGTTG.................................................................... 23 1 12.00 10.00 0.00 0.00 2.00 ...............................TAAGTAGTATCCATTATAGGGTTG.................................................................... 24 1 12.00 11.00 0.00 0.00 1.00 ...............................TAAGTAGTATCCATTAAAGGGGT..................................................................... 23 1 11.00 11.00 0.00 0.00 0.00 ...............................TAAGTAGTTTCCATTAAAGGGTTG.................................................................... 24 1 11.00 10.00 0.00 0.00 1.00 ...............................TAAGTAGTATCCATTAAAGGATTG.................................................................... 24 1 11.00 10.00 0.00 0.00 1.00 ...............................TAAGTAGTAGCCATTAAAGGGTTG.................................................................... 24 1 11.00 9.00 0.00 0.00 2.00 ...............................TAAGTAGTATCGATTAAAGGGTTG.................................................................... 24 1 11.00 9.00 0.00 0.00 2.00 .......................................................................CAACCGTTTGATGTACTACTTTAG............................ 24 1 11.00 0.00 0.00 0.00 11.00 ...............................TAAGTAGGATCCATTAAAGGGGTG.................................................................... 24 1 11.00 11.00 0.00 0.00 0.00 ...............................TAAGTAGGATACATTAAAGGGTTG.................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ...............................AAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 10.00 8.00 0.00 0.00 2.00 ...............................TAAGTAGTATCCATTAAATGGTTT.................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTAG.................................................................... 24 1 10.00 7.00 0.00 0.00 3.00 ..........................................................................CCGTTTGATGTACTACTTTAGT........................... 22 1 9.00 2.00 0.00 0.00 7.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_3:14598-14719 -	91.16	TCAAAGAA-AAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCAAAGAAAAAATTGTTCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCGTTTGATGTACTACTTTAGGAATCTACAGTCAAAGTCAACAT-TAAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...............................TAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 129635.00 6.00 129123.00 506.00 ...............................TAAGTAGTATCCATTAAAGGGTT..................................................................... 23 1 2931.00 2.00 2914.00 15.00 ..............................TTAAGTAGTATCCATTAAAGGGTT..................................................................... 24 1 682.00 0.00 679.00 3.00 ...............................TAAGTAGTATCCATTAAAGGGT...................................................................... 22 1 430.00 1.00 426.00 3.00 ...............................TAAGTAGTATCCATTAAAGGGTTGT................................................................... 25 1 408.00 0.00 406.00 2.00 ...............................TAAGTAGTATCCATTAAAGGGTTGA................................................................... 25 1 351.00 0.00 351.00 0.00 ...............................TAAGTAGTATCCATTxAAGGGTTG.................................................................... 23 1 276.00 0.00 276.00 0.00 ...............................TAAGTAGTATCTATTAAAGGGTTG.................................................................... 24 1 270.00 0.00 269.00 1.00 ...............................TAAGTAGTATTCATTAAAGGGTTG.................................................................... 24 1 201.00 0.00 201.00 0.00 ...............................TAAGTAGTATCCATTTAAGGGTTG.................................................................... 24 1 182.00 0.00 180.00 2.00 ...............................TAGGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 173.00 0.00 173.00 0.00 ...............................TAAGTAGTATCCATTAAGGGGTTG.................................................................... 24 1 173.00 0.00 173.00 0.00 ...............................TAAGTAGTATCCATTAAAAGGTTG.................................................................... 24 1 168.00 0.00 167.00 1.00 ...............................TAAGTAGTATCCGTTAAAGGGTTG.................................................................... 24 1 154.00 0.00 154.00 0.00 ...............................TAAGTAGTACCCATTAAAGGGTTG.................................................................... 24 1 154.00 0.00 153.00 1.00 ...............................TAAGCAGTATCCATTAAAGGGTTG.................................................................... 24 1 139.00 0.00 139.00 0.00 ...............................TAAGTAGTATCCATTAAAGG........................................................................ 20 1 138.00 0.00 138.00 0.00 ...............................TAAGTAGTGTCCATTAAAGGGTTG.................................................................... 24 1 135.00 0.00 134.00 1.00 ...............................TAAGTAGCATCCATTAAAGGGTTG.................................................................... 24 1 122.00 0.00 122.00 0.00 ...............................TAAGTAGTATCCATTAGAGGGTTG.................................................................... 24 1 120.00 0.00 119.00 1.00 ...............................TAAGTAGTATCCATCAAAGGGTTG.................................................................... 24 1 120.00 0.00 119.00 1.00 ...............................TAAGTAGTATCCATTAAAGGGCTG.................................................................... 24 1 118.00 0.00 118.00 0.00 ...............................TAAGTGGTATCCATTAAAGGGTTG.................................................................... 24 1 116.00 0.00 116.00 0.00 ...............................TAAGTAGTATCCATTAAAGGG....................................................................... 21 1 116.00 0.00 116.00 0.00 ...............................TAAGTACTATCCATTAAAGGGTTG.................................................................... 24 1 115.00 0.00 115.00 0.00 ................................AAGTAGTATCCATTAAAGGGTTG.................................................................... 23 1 114.00 0.00 113.00 1.00 ..............................CTAAGTAGTATCCATTAAAGGGTTG.................................................................... 25 1 113.00 0.00 112.00 1.00 ...............................TAAGTATTATCCATTAAAGGGTTG.................................................................... 24 1 109.00 0.00 109.00 0.00 ...............................TAAGTAGTATCCATTAAAGGTTTG.................................................................... 24 1 108.00 0.00 108.00 0.00 .........................................................................ACCGTTTGATGTACTACTTTAG............................ 22 1 107.00 0.00 107.00 0.00 ...............................TAAGTAGTATCCATAAAAGGGTTG.................................................................... 24 1 101.00 0.00 101.00 0.00 ...............................CAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 101.00 0.00 101.00 0.00 ...............................TAAGTAGTATCCATTGAAGGGTTG.................................................................... 24 1 100.00 0.00 99.00 1.00 ...............................TAAGTAGTATCCATTAAAGGGTTGC................................................................... 25 1 98.00 0.00 98.00 0.00 ...............................TAAGTxxTATCCATTAAAGGGTTG.................................................................... 22 1 97.00 0.00 97.00 0.00 ...............................TAAGTAGTATCCATTAATGGGTTG.................................................................... 24 1 91.00 0.00 90.00 1.00 ...............................TACGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 87.00 0.00 86.00 1.00 ...............................TAAGTAGTATACATTAAAGGGTTG.................................................................... 24 1 87.00 0.00 86.00 1.00 ...............................TAAGTAGTATCCATTAAAGTGTTG.................................................................... 24 1 86.00 0.00 85.00 1.00 .................................AGTAGTATCCATTAAAGGGTTG.................................................................... 22 1 85.00 0.00 85.00 0.00 ...............................TAAGTAGTATCCACTAAAGGGTTG.................................................................... 24 1 77.00 0.00 77.00 0.00 ..................................TAAGTATCCATTAAAGGGTTG.................................................................... 21 1 77.00 0.00 77.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTCG.................................................................... 24 1 76.00 0.00 76.00 0.00 ...............................TGAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 75.00 0.00 75.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTTA.................................................................... 24 1 72.00 0.00 71.00 1.00 ...............................TAAGTAGTATCAATTAAAGGGTTG.................................................................... 24 1 70.00 0.00 70.00 0.00 ...............................TAAGTAGTATCCATTAAAGGTTG..................................................................... 23 1 64.00 0.00 64.00 0.00 ................................TAGTAGTATCCATTAAAGGGTTG.................................................................... 23 1 63.00 0.00 63.00 0.00 ...............................TAAGTAGTATCCATTAAAGCGTTG.................................................................... 24 1 62.00 0.00 61.00 1.00 ...............................TAAGTAGTATCCATTAAATGGTTG.................................................................... 24 1 62.00 0.00 60.00 2.00 ...............................TAAGTAGTATCCATTAAAGGCTTG.................................................................... 24 1 61.00 0.00 61.00 0.00 ...............................TAACTAGTATCCATTAAAGGGTTG.................................................................... 24 1 60.00 0.00 60.00 0.00 ...............................TAAGAAGTATCCATTAAAGGGTTG.................................................................... 24 1 60.00 0.00 58.00 2.00 ...............................TAAGTAGTATCCATTACAGGGTTG.................................................................... 24 1 60.00 0.00 60.00 0.00 ...............................TAAGTAGTATCCATTAAAGAGTTG.................................................................... 24 1 58.00 0.00 56.00 2.00 ...............................TAAGTAGTATCCATTCAAGGGTTG.................................................................... 24 1 57.00 0.00 57.00 0.00 ...............................TATGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 54.00 0.00 53.00 1.00 ...............................TAAGTAATATCCATTAAAGGGTTG.................................................................... 24 1 54.00 0.00 52.00 2.00 ...............................TCAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 50.00 0.00 50.00 0.00 ...............................TAAGTAGTTTCCATTAAAGGGTTG.................................................................... 24 1 48.00 0.00 48.00 0.00 ...............................TAAGTTGTATCCATTAAAGGGTTG.................................................................... 24 1 46.00 0.00 46.00 0.00 ...............................TAAGTAGTATCCCTTAAAGGGTTG.................................................................... 24 1 46.00 0.00 46.00 0.00 ...............................TAATTAGTATCCATTAAAGGGTTG.................................................................... 24 1 45.00 0.00 45.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTTT.................................................................... 24 1 44.00 0.00 44.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTTC.................................................................... 24 1 42.00 0.00 42.00 0.00 ...............................TAAGTAGTATCCATTAAAGGATTG.................................................................... 24 1 41.00 0.00 41.00 0.00 ...............................TAAGTAGTAACCATTAAAGGGTTG.................................................................... 24 1 40.00 0.00 40.00 0.00 ...............................TAAGTAGTATCCATTAAACGGTTG.................................................................... 24 1 40.00 0.00 39.00 1.00 ...............................TAAGTAGTATCCAATAAAGGGTTG.................................................................... 24 1 38.00 0.00 38.00 0.00 ...............................TAAGTAGTATCCATTAACGGGTTG.................................................................... 24 1 38.00 0.00 37.00 1.00 ...............................TAAGTAGTATCCATTATAGGGTTG.................................................................... 24 1 37.00 0.00 37.00 0.00 ...............................TAAGTAGAATCCATTAAAGGGTTG.................................................................... 24 1 36.00 0.00 35.00 1.00 ...............................TAAGTAGTCTCCATTAAAGGGTTG.................................................................... 24 1 34.00 0.00 34.00 0.00 ...................................TAGTATCCATTAAAGGGTTG.................................................................... 20 1 34.00 0.00 34.00 0.00 ...............................GAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 31.00 0.00 31.00 0.00 ...............................TAAGTAGTATCCATTAAAG......................................................................... 19 1 31.00 0.00 31.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTTTG................................................................... 25 1 30.00 0.00 30.00 0.00 ...............................TAAGTAGTATCCATTxxAGGGTTG.................................................................... 22 1 29.00 0.00 29.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGGTG.................................................................... 24 1 26.00 0.00 26.00 0.00 ...............................TAAATAGTATCCATTAAAGGGTTG.................................................................... 24 1 22.00 0.00 22.00 0.00 ...............................TAAGTAGTATCCTTTAAAGGGTTG.................................................................... 24 1 21.00 0.00 20.00 1.00 ...............................TAAGTAGTATCGATTAAAGGGTTG.................................................................... 24 1 19.00 0.00 19.00 0.00 ...............................TAAGTAxTATCCATTAAAGGGTTG.................................................................... 23 1 18.00 0.00 18.00 0.00 ..............................TTAAGTAGTATCCATTAAAGGGT...................................................................... 23 1 18.00 0.00 18.00 0.00 ..............................TTAAGTAGTATCCATTAAAGGGTTG.................................................................... 25 1 18.00 0.00 18.00 0.00 ...............................TAAGGAGTATCCATTAAAGGGTTG.................................................................... 24 1 16.00 0.00 16.00 0.00 ...............................TAAGTAGTATCCAxTAAAGGGTTG.................................................................... 23 1 15.00 0.00 15.00 0.00 .............................TCTAAGTAGTATCCATTAAAGGGTTG.................................................................... 26 1 15.00 0.00 15.00 0.00 ...............................TAAGTAGTATGCATTAAAGGGTTG.................................................................... 24 1 14.00 0.00 14.00 0.00 ...............................AAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 14.00 0.00 14.00 0.00 ...............................TAAGTxGTATCCATTAAAGGGTTG.................................................................... 23 1 13.00 0.00 13.00 0.00 ...............................TAAGTCGTATCCATTAAAGGGTTG.................................................................... 24 1 13.00 0.00 13.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTAG.................................................................... 24 1 13.00 0.00 13.00 0.00 ...............................TAAGTAGTATCCAGTAAAGGGTTG.................................................................... 24 1 12.00 0.00 12.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTGG.................................................................... 24 1 11.00 0.00 10.00 1.00 ...............................TAAGTAGTATCCATTAAAGGGATG.................................................................... 24 1 11.00 0.00 11.00 0.00 ...............................TAAGTAGTATxCATTAAAGGGTTG.................................................................... 23 1 11.00 0.00 11.00 0.00 .........................................................................ACCGTTTGATGTACTACTTTA............................. 21 1 10.00 0.00 10.00 0.00 ...............................TTAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 10.00 0.00 10.00 0.00 ...............................TAAGTAGTATCCATTAAAGGGTTGTA.................................................................. 26 1 10.00 1.00 9.00 0.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2L:10160053-10160172 -	86.07	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCAAGGAAAAGTGTTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCA-CAATAAGATCAACCTTTTGATTTACTACTTTAGGAATCTCCAGTCAAAGTCAACAT-TAAT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..............................TAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 15225.00 15169.00 14.00 0.00 40.00 2.00 ..............................TAAGTAGTATCCATTAAAGGGTT..................................................................... 23 1 223.00 220.00 1.00 0.00 2.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGGTG.................................................................... 24 1 99.00 99.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTCAAGGGTTG.................................................................... 24 1 97.00 96.00 0.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGCTG.................................................................... 24 1 85.00 85.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTT.................................................................... 24 1 67.00 65.00 1.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCATTAACGGGTTG.................................................................... 24 1 62.00 62.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATACATTAAAGGGTTG.................................................................... 24 1 49.00 49.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCTATTAAAGGGTTG.................................................................... 24 1 39.00 39.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTCTCCATTAAAGGGTTG.................................................................... 24 1 37.00 37.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGT...................................................................... 22 1 35.00 35.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGATG.................................................................... 24 1 29.00 29.00 0.00 0.00 0.00 0.00 ..............................TAAGTATTATCCATTAAAGGGTTG.................................................................... 24 1 27.00 27.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGGATCCATTAAAGGGTTG.................................................................... 24 1 26.00 26.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAAGGTTG.................................................................... 24 1 25.00 25.00 0.00 0.00 0.00 0.00 ........................................................................ACCTTTTGATTTACTACTTTAG............................ 22 1 25.00 25.00 0.00 0.00 0.00 0.00 ..............................TAAGGAGTATCCATTAAAGGGTTG.................................................................... 24 1 23.00 22.00 0.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCATTACAGGGTTG.................................................................... 24 1 22.00 22.00 0.00 0.00 0.00 0.00 ..............................TAGGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 21.00 20.00 0.00 0.00 1.00 0.00 ..............................TAAGTAGTATACATTAAAGGGGTG.................................................................... 24 1 20.00 20.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCGTTAAAGGGTTG.................................................................... 24 1 20.00 20.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAGAGGGTTG.................................................................... 24 1 20.00 20.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAGGGGTTG.................................................................... 24 1 19.00 19.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTGT................................................................... 25 1 19.00 19.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTGTCCATTAAAGGGTTG.................................................................... 24 1 17.00 17.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTGAAGGGTTG.................................................................... 24 1 17.00 17.00 0.00 0.00 0.00 0.00 ..............................CAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 16.00 16.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTTAAGGGTTG.................................................................... 24 1 16.00 16.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGTTTG.................................................................... 24 1 16.00 15.00 0.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCATTAAACGGTTG.................................................................... 24 1 16.00 15.00 0.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCATCAAAGGGTTG.................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 0.00 ..............................TAAGAAGTATCCATTAAAGGGTTG.................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGTGTTG.................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGCATCCATTAAAGGGTTG.................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 0.00 ..............................TAAGCAGTATCCATTAAAGGGTTG.................................................................... 24 1 14.00 14.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGAGTTG.................................................................... 24 1 14.00 14.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCCTTAAAGGGTTG.................................................................... 24 1 14.00 13.00 0.00 0.00 1.00 0.00 ........................................................................ACCTTTTGATTTACTACTTTAGT........................... 23 1 14.00 14.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTA.................................................................... 24 1 14.00 14.00 0.00 0.00 0.00 0.00 ...............................AAGTAGTATCCATTAAAGGGTTG.................................................................... 23 1 13.00 13.00 0.00 0.00 0.00 0.00 .............................CTAAGTAGTATCCATTAAAGGGTTG.................................................................... 25 1 12.00 12.00 0.00 0.00 0.00 0.00 ..............................TCAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 12.00 12.00 0.00 0.00 0.00 0.00 ..............................TAAGTGGTATCCATTAAAGGGTTG.................................................................... 24 1 11.00 11.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTCG.................................................................... 24 1 11.00 11.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAATGGTTG.................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGATTG.................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTC.................................................................... 24 1 10.00 9.00 0.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCTTTAAAGGGTTG.................................................................... 24 1 9.00 8.00 0.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGGTT.................................................................... 24 1 9.00 9.00 0.00 0.00 0.00 0.00 ..............................TGAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTACCCATTAAAGGGTTG.................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCACTAAAGGGTTG.................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGCGTTG.................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGGATACATTAAAGGGTTG.................................................................... 24 1 7.00 7.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTTTCCATTAAAGGGTTG.................................................................... 24 1 7.00 7.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTCACGGGTTG.................................................................... 24 1 7.00 7.00 0.00 0.00 0.00 0.00 .............................TTAAGTAGTATCCATTAAAGGGTT..................................................................... 24 1 7.00 7.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTGA................................................................... 25 1 7.00 7.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATACATTAAAGGGCTG.................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATTCATTAAAGGGTTG.................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATGCATTAAAGGGTTG.................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTTAAGGGGTG.................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGG....................................................................... 21 1 6.00 6.00 0.00 0.00 0.00 0.00 ..............................TAAGGAGTATCCATTAAAGGGGTG.................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 0.00 ..............................AAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTCTCCATTAACGGGTTG.................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 0.00 ..............................TAAGGAGTATCCATTAAAGGGCTG.................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTAG.................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 0.00 ..............................TAAGTAATATCCATTAAAGGGTTG.................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGGT..................................................................... 23 1 5.00 5.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATGAAAGGGTTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCAATTAAAGGGTTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTCTCCATTCAAGGGTTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTATTATCCATTAAAGGGTTT.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAACGGGTTT.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTGC................................................................... 25 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCGATTAAAGGGTTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTAACCATTAAAGGGTTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TACGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 .............TTTGATGCAAGCTTCTTTA.......................................................................................... 19 1 4.00 0.00 1.00 0.00 3.00 0.00 ..............................TAAGTAGGATCCATTAAAGGGGTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTCAAGGGCTG.................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGGATCCGTTAAAGGGTTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGAGATG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGG........................................................................ 20 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TGAGTAGTATCCATTAAAGGGCTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCAGTAAAGGGTTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTTGTATCCATTAAAGGGTTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGCTC.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 .............................TTAAGTAGTATCCATTAAAGGGTTG.................................................................... 25 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATGAAAGGGGTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATACATTAAAAGGTTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGCTT.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTACAGGGTT..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTCTCCATTTAAGGGTTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 .............TTTGATGCAAGCTTCTTT........................................................................................... 18 1 3.00 0.00 2.00 0.00 1.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGATA.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTGG.................................................................... 24 1 3.00 2.00 0.00 0.00 0.00 1.00 ..............................GAAGTAGTATCCATTAAAGGGTTG.................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scaffold_4929:11718898-11719017 +	88.52	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACA-TGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCAAAGAAAAGTTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCA-CAAT-TGAATCGACCGTTTAATGTACTACTTTAAGAATCTCCAGTCAAAGTCAACA-ATAAT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................TAAGTAGTATCCATTAAAGGGTTG..................................................................... 24 1 7704.00 7686.00 0.00 0.00 18.00 ..............................TAAGTAGTATCCATTAAAGGGTTT..................................................................... 24 1 385.00 385.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTT...................................................................... 23 1 168.00 166.00 0.00 0.00 2.00 ..............................TAAGTAGTATCCATTAAAGTGTTG..................................................................... 24 1 167.00 167.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAATGGTTG..................................................................... 24 1 117.00 116.00 0.00 0.00 1.00 ..............................TAAGTAGTATCCATTAAAGGTTTG..................................................................... 24 1 75.00 75.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGCTG..................................................................... 24 1 66.00 66.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGGTG..................................................................... 24 1 59.00 59.00 0.00 0.00 0.00 .........................................................................ACCGTTTAATGTACTACTTTAA............................ 22 1 39.00 39.00 0.00 0.00 0.00 ..............................TAAGGAGTATCCATTAAAGGGTTG..................................................................... 24 1 38.00 38.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAACGGTTG..................................................................... 24 1 36.00 36.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGCGTTG..................................................................... 24 1 35.00 35.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGTGTTT..................................................................... 24 1 33.00 33.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAATGGTTT..................................................................... 24 1 30.00 30.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAACGGGTTG..................................................................... 24 1 28.00 28.00 0.00 0.00 0.00 ..............................TAAGTATTATCCATTAAAGGGTTG..................................................................... 24 1 28.00 28.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTACAGGGTTG..................................................................... 24 1 27.00 27.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGT....................................................................... 22 1 26.00 26.00 0.00 0.00 0.00 ..............................TAAGTAGGATCCATTAAAGGGTTG..................................................................... 24 1 25.00 25.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAAGGTTG..................................................................... 24 1 24.00 24.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGAGTTG..................................................................... 24 1 22.00 22.00 0.00 0.00 0.00 ..............................TAAGCAGTATCCATTAAAGGGTTG..................................................................... 24 1 21.00 21.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTCAAGGGTTG..................................................................... 24 1 19.00 19.00 0.00 0.00 0.00 .............................TTAAGTAGTATCCATTAAAGGGTT...................................................................... 24 1 19.00 19.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGTTTT..................................................................... 24 1 17.00 17.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGATTG..................................................................... 24 1 17.00 17.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCCTTAAAGGGTTG..................................................................... 24 1 16.00 16.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGCTTG..................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTC..................................................................... 24 1 15.00 15.00 0.00 0.00 0.00 ..............................TAAGTAGCATCCATTAAAGGGTTG..................................................................... 24 1 14.00 14.00 0.00 0.00 0.00 ..............................TAATTAGTATCCATTAAAGGGTTG..................................................................... 24 1 13.00 13.00 0.00 0.00 0.00 ................................AGTAGTATCCATTAAAGGGTTG..................................................................... 22 1 13.00 13.00 0.00 0.00 0.00 ..............................TAAGTAGTGTCCATTAAAGGGTTG..................................................................... 24 1 11.00 11.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAGGGGTTG..................................................................... 24 1 11.00 11.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGATG..................................................................... 24 1 11.00 11.00 0.00 0.00 0.00 ..............................CAAGTAGTATCCATTAAAGGGTTG..................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ..............................TAAGTAGTATACATTAAAGGGTTG..................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCACTAAAGGGTTG..................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ..............................TAGGTAGTATCCATTAAAGGGTTG..................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTTAAGGGTTG..................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAATGTTTG..................................................................... 24 1 10.00 10.00 0.00 0.00 0.00 ..............................TGAGTAGTATCCATTAAAGGGTTG..................................................................... 24 1 9.00 9.00 0.00 0.00 0.00 ..............................TAAGTAGTATTCATTAAAGGGTTG..................................................................... 24 1 9.00 9.00 0.00 0.00 0.00 ..............................TAACTAGTATCCATTAAAGGGTTG..................................................................... 24 1 9.00 9.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTA..................................................................... 24 1 9.00 9.00 0.00 0.00 0.00 ..............................TAAGTGGTATCCATTAAAGGGTTG..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTAGTACCCATTAAAGGGTTG..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTCG..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 .............................CTAAGTAGTATCCATTAAAGGGTTG..................................................................... 25 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGG........................................................................ 21 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGAAGTATCCATTAAAGGGTTG..................................................................... 24 1 8.00 7.00 1.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTGT.................................................................... 25 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTAATATCCATTAAAGGGTTG..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTGAAGGGTTG..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGCTT..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 ..............................GAAGTAGTATCCATTAAAGGGTTG..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTACTATCCATTAAAGGGTTG..................................................................... 24 1 8.00 8.00 0.00 0.00 0.00 ..............................TAAGTAGTATCTATTAAAGGGTTG..................................................................... 24 1 7.00 7.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAATTGTTG..................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAAGGTTT..................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 ..............................TAATTAGTATCCATTAAAGGGTTT..................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATCAAAGGGTTG..................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGGTT..................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 ..............................TATGTAGTATCCATTAAAGGGTTG..................................................................... 24 1 6.00 6.00 0.00 0.00 0.00 ..............................TAAGTATTATCCATTAAATGGTTG..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............................TAAGTATTATCCATTAAAGGGTTT..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAACTGTTG..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCGTTAAAGGGTTG..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............................TAAGAAGTATCCATTAAAGGGTTT..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............TTGATGCAAGCTTCTTTA........................................................................................... 18 1 5.00 5.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTGG..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAGAGGGTTG..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............................TACGTAGTATCCATTAAAGGGTTG..................................................................... 24 1 5.00 5.00 0.00 0.00 0.00 ..............................TAAGGAGGATCCATTAAAGGGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTCTCCATTAAAGGGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ...............................AAGTAGTATCCATTAAAGGGTTG..................................................................... 23 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAATGATTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATGAAAGGGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATACATTAAAGTGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGGAGTATCCATTAAATGGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCTTTAAAGGGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGTCTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTCGTATCCATTAAAGGGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCAATAAAGGGTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGCCTTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTGC.................................................................... 25 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTCAAGGGTTT..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAGAG......................................................................... 20 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGGGTTGA.................................................................... 25 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGTGCTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAATGGCTG..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTxAAGGGTTG..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAACGCTTG..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAACGGTTT..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGTTTTG..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGCGTTT..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAAGGTTC..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAGG......................................................................... 20 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCCATTACAGTGTTG..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTAGTATCAATTAAAGGGTTG..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00 ..............................TAAGTATTATCCATTAAAGGTTTG..................................................................... 24 1 3.00 3.00 0.00 0.00 0.00

droFic1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000448796:168-292 +	62.29	TCAAAGAAAAATTGTT---------GATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG CAAATTAAGAACTTTACTCAACAAATACTGCAGATTCCTTAAGTAGTAACCATTAAAGGGTTGTTAATCAGATA-AATCCAACCTTATGGTATACTACTTTAAGAAACTCTAGTTATACAGAACAC----- Size Hit Count Total Norm
4	scf7180000453925:244654-244781 +	60.11	TCAAAGAAAAATTGT---------TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG CAAATTAAGCACTTTACTCAATAAATACTGCAGATTCCTTAAGTAGTAACCATTAAAGGGTTGTTAATCAGA-TAAATCCAACCTTATGGCTTACTACTTTAAGAAACTCTAGTTA--TACAGAACACTAT Size Hit Count Total Norm
3	scf7180000448796:343-439 +	41.64	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAA------TCTCCAGTTAAAGTCAACACATAAG TTA-----------------------------AGTAGTGGATAC-AAAAGGCGATTTGTATAACGAAAGTTCGCATTGT-ATGTCCTACTTAAGTGGCTGATTTTTTCAAGCAACATCAAAAAATTGT Size Hit Count Total Norm

droEug1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409452:319733-319851 -	70.61	TCAAAGAA----------AAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCGAGTAATGCTTCATAAAT-------ATTGCGGATTCTTTAAGTAGTAACCATTAAAGGGTTGTTCC-TATAAGATAATCAACCTTTTGATGTACTACTTTAAGAAGCTGTAGTCGAATTCAACAT----- Size Hit Count Total Norm
1	scf7180000409758:226396-226525 +	48.19	TCAAAGAAAAATTGTTGATGGAAG----------------CTTCCTTAAGTAGTATCCATTAAAG-GGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TTTAAAAAAAATTTTTAAA--AAGTTCTTAAAACTCTATTTTTTATTAAGTAGAA-ATATTAACGCTGTTGGTTTATATATGCATATCACTTTATCAAAA--CGGG-TTTGAAATATGTAGCTCAAG---AAATATAAT Size Hit Count Total Norm
3	scf7180000409452:320176-320205 -	13.59	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG ---AAGAAAATATAAAGATATGAAATTCTTTA------------------------------------------------------------------------------------------ Size Hit Count Total Norm

droBia1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302408:2583425-2583541 +	71.13	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TAAGTGCAAATTTCTTG----CAGTTTCCTTAAGTAGTAACCATTAAAGGGTTGTCATTATAAT-AAAATCAACCGTTTGATGTACTACTTTAAGAAACTGCAGTCCATTTCTTCATTTTAA Size Hit Count Total Norm
1	scf7180000302041:685482-685514 +	14.86	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TTAA----AAATGTAGGGTCCAATCGTTTTTAAATAG------------------------------------------------------------------------------------- Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000414072:20179-20357 +	36.13	TCAAAGAAAAATTG---------TTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTT------------------------------------------------AAAGTCA-ACACATAAG TCGCATAATAGTTTGAGTCCAAATTTATTGCAGTTTCCTTAAGTAGTAACCATTAAAGGGTTGTTATTATAAT-AAAACCAACCGTTTGATGTACTACTTCAAGAAACTCCAGTCCTCTTTTACATTTATTAGTAAATTGGAAAATTGTTTTTGAAATTTCAAAAAATCATACATTTAAG Size Hit Count Total Norm

droEle1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	scf7180000491338:1357126-1357252 -	65.7	TCAAAGAAAAATTGTT------GATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG GCAAAGAATAGTTTACCATTAGAACTGCAGCTTCCTTAAGTAGTAACCATTAAAGGGTTGT-CAAAATAATTGAACCAACCATTTAATGTACTACTTTAAGAAACTCCAGACCATGCCAGTGTTTAAA Size Hit Count Total Norm
4	scf7180000491338:1356862-1356955 -	35.96	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCA--GAACTTATATTTATCAATGTTTTTATAAGTATTCACTTTCAAGGACTTTATTTTA-TTT--------A-TTTTTTAAGCAATAGCTTAACAATTTATAT----------------AA Size Hit Count Total Norm
2	scf7180000491023:386517-386532 +	10.83	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCAAATAAAAAAAGTT---------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scf7180000780107:332476-332606 +	64.54	TCAAAGAAAAATTGTTGAT----------GGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATA-AG CCAAGGAATAGTTACAG-TGAATAAATTCTGCAGCTTCTTTAAGTAGTAACCATTAAAGGGTTGTTATAAAAAT-TGAGCCAACCATTTAATGTACTACTTTAATAATCTCCAGACAATGTCGCCGTTTAAAG Size Hit Count Total Norm

droKik1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302236:231986-232127 +	50.23	TCAAAGAAAAATTGTTG--ATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACAT-------------------AAG CCAAGTGCTAATCTTCGGTATTGCAGTCTCTCTAAGTAGTATCCATTAAAGAGTCGTGATT-ATATTCAAATCGACCTTGTGGTTTACTACCTTAAGAAACTTCAGTTTATTCCGGCTTTCATATAGAATCACTATCTTGAAT Size Hit Count Total Norm
3	scf7180000302236:232741-232855 +	44.08	TCAAAGAAAA--ATTGTTGATGGAAGC----------TTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG AAAGAGAAATACATTGTTTAGGTATAACAAAACCCTAATACGGTTCTAATATTTATTTTCGGGATA--------------------ATTTTGAAGTTTGAATTTAAAAAGTTCAGGATAAAATTCTGAATTGAA Size Hit Count Total Norm
1	scf7180000302236:228898-228948 +	24.29	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTA-AGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG CTAAGTGCTAAGTGCTAAT-----CTTCAGTACTGCAGTATCCATTAAAAAATCGT------------------------------------------------------------------- Size Hit Count Total Norm

droAna3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scaffold_12943:1815538-1815649 -	67.14	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAAC--ACATAAG AA--------A----TTATGGCAGTTTCCTTAAGTAGTATCCATTAAAGGGTCGTTAAT-ATATTCAAAGTGACCGTTTGATGTACTACTTTAGGTAGCTCCATTTAAAGTCGGCTAAAATAAG Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..............................TAAGTAGTATCCATTAAAGGGTCG...................................................................... 24 1 1695.00 14.00 41.00 11.00 1629.00 ..............................TAAGTAGTATCCATTAAAGGGTTG...................................................................... 24 1 134.00 12.00 17.00 0.00 105.00 ..............................TAAGTAGTATCCATTAAGAGGTCG...................................................................... 24 1 57.00 0.00 0.00 0.00 57.00 ..............................TAAGTAGTATCCATTAAAGGGTC....................................................................... 23 1 42.00 0.00 0.00 0.00 42.00 ..............................TAAGTAGTATCCATTAAAGTGTCG...................................................................... 24 1 38.00 0.00 0.00 0.00 38.00 ..............................TAAGTAGTATCCATTAAAGGGTCT...................................................................... 24 1 33.00 0.00 0.00 0.00 33.00 ..............................TAAGTAGTATCCATTAAATGGTCG...................................................................... 24 1 27.00 0.00 0.00 1.00 26.00 ..............................TAAGTAGTAACCATTAAAAGGTCG...................................................................... 24 1 23.00 0.00 0.00 0.00 23.00 ..............................TAAGTAGTATCCATTAAAGGTTCG...................................................................... 24 1 20.00 0.00 0.00 0.00 20.00 ..............................TAAGTAGTATCCATTAAAGGGTCC...................................................................... 24 1 19.00 0.00 0.00 0.00 19.00 ..............................TAAGTAGTATCCATTACAGGGTCG...................................................................... 24 1 15.00 0.00 0.00 0.00 15.00 ..............................TAAGTAGTATCCATTAACGGGTCG...................................................................... 24 1 13.00 0.00 0.00 0.00 13.00 ..............................TAAGTAGTATCCATTAAAGGGT........................................................................ 22 1 10.00 0.00 1.00 0.00 9.00 ..............................TAAGTAGTATCCATTAAAGG.......................................................................... 20 1 10.00 0.00 0.00 0.00 10.00 ..............................TAAGGAGTATCCATTAAAGGGTCG...................................................................... 24 1 10.00 0.00 0.00 0.00 10.00 ..............................TAAGTAGTATCCATTAAAGGGGCG...................................................................... 24 1 10.00 0.00 0.00 0.00 10.00 ..............................TAAGTAGTATCCATTAAAGGGTTT...................................................................... 24 1 9.00 0.00 2.00 0.00 7.00 ..............................TAAGTAGTATCCATTCAAGGGTCG...................................................................... 24 1 9.00 0.00 0.00 0.00 9.00 ..............................TAAGTAGTAACCTTTAAAGGGTCG...................................................................... 24 1 9.00 0.00 9.00 0.00 0.00 ..............................TAAGTAGTATCCATTAAAG........................................................................... 19 1 9.00 0.00 0.00 0.00 9.00 ..............................TAAGTAGGATCCATTAAAGGGTCG...................................................................... 24 1 8.00 0.00 0.00 0.00 8.00 ..............................TAAGTAGTATCCATTAAAGCGTCG...................................................................... 24 1 8.00 0.00 0.00 0.00 8.00 ..............................TAAGTAGCATCCATTAAAGGGTCG...................................................................... 24 1 8.00 0.00 0.00 0.00 8.00 ........................................................................ACCGTTTGATGTACTACTTTAG.............................. 22 1 8.00 0.00 0.00 0.00 8.00 ..............................TAAGTAGTATCCATTAAAGGGCCG...................................................................... 24 1 7.00 0.00 0.00 0.00 7.00 ..............................TAAGTAGTATCCATTAAACGGTCG...................................................................... 24 1 7.00 0.00 0.00 0.00 7.00 ..............................TAAGTAGTATCCATTAAATGGTTG...................................................................... 24 1 7.00 0.00 2.00 0.00 5.00 ..............................TAAGTAGTATCCATTAAAGGGTT....................................................................... 23 1 6.00 0.00 0.00 0.00 6.00 ..............................TAAGAAGTATCCATTAAAGGGTCG...................................................................... 24 1 6.00 0.00 0.00 0.00 6.00 ..............................TAAGTAGTATCCATTAAAAGGTCG...................................................................... 24 1 6.00 0.00 0.00 0.00 6.00 ..............................TAAGTAGTATCCATTAAAGGCTCG...................................................................... 24 1 5.00 0.00 0.00 0.00 5.00 ..............................TAGGTAGTATCCATTAAAGGGTCG...................................................................... 24 1 5.00 0.00 0.00 0.00 5.00 ..............................TAAGTAGTATCCATTAAAGGTTCC...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTATCCATTTAAGGGTCG...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTATCCATTAAGGGGTCG...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTATCCATTAAATGTTCG...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTATTATCCATTAAAGGGTCG...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTATCCATTAAAGGATCG...................................................................... 24 1 4.00 0.00 1.00 0.00 3.00 ..............................TAAGCAGTATCCATTAAAGGGTCG...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTATCCATTAAAGGTTTG...................................................................... 24 1 4.00 1.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTAAAGTGTCT...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ................................AGTAGTATCCATTAAAGGGTCG...................................................................... 22 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTCTCCATTAAAGGGTCG...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTACCCATTAAAGGGTCG...................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 ..............................TAAGTAGTATCCATTAAAGTGTC....................................................................... 23 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTAAA............................................................................ 18 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCTATTAAAGGGTCG...................................................................... 24 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTAAAGAGTCG...................................................................... 24 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTACAGGGTCC...................................................................... 24 1 3.00 0.00 0.00 0.00 3.00 .........................................................................CCGTTTGATGTACTACTTTAGG............................. 22 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTAAAGGTTCT...................................................................... 24 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTAAAGGGTCGC..................................................................... 25 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTAAAGGGTAG...................................................................... 24 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCGTTAAAGGGTCG...................................................................... 24 1 3.00 0.00 0.00 0.00 3.00 ..............................TAAGTAGTATCCATTAAAGTTTCG...................................................................... 24 1 3.00 0.00 0.00 0.00 3.00
5	scaffold_13117:3724037-3724163 -	45.79	TCAAAGAA-------------AAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAAT------CAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG TCAGAGTATTTCCTACTTATAATATATTAAATATTAGTTTTTTTAAAA------------AGCTTTTTTTTCTAAAAGCTCTTAATAATTAA--AAATAGTATTCAACATTAATAAAATACTTTTAAAGTTACAAATAGAC Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .............TACTCAxAATATATTAAATA............................................................................................................ 19 2 1.00 0.00 0.50 0.00 0.50 ............................AAATATTxGTTGTTTTAAAA------------................................................................................. 19 2 0.50 0.00 0.00 0.00 0.50 ............................AAATATTAGTTTAGTTAAA.............................................................................................. 19 1 1.00 0.00 1.00 0.00 0.00 .............................AATATTxGTTGTTTTAAAA------------A................................................................................ 19 1 1.00 0.00 1.00 0.00 0.00 ..............................AAATTAGTTGTTTTAAAA------------................................................................................. 18 3 0.33 0.00 0.00 0.00 0.33

droBip1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000396728:1424183-1424317 +	59.26	TCAAAGAAAAATT---------GTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACA----CATAAG TTGGAGGAAAGTTTGAACCCCAGGTGATGGCAGTTTCTTTAAGTAGTATCCATTAAAGGGTCGTTAACATATTTAAAATTGACCATTTAATGTACTACTTTGAGTAACTCCATATAAAGTCGTCCAAGTTGAAAA Size Hit Count Total Norm
3	scf7180000396380:184937-185004 -	31.67	TCAAAGAAAAATTGTTGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACATGCAAATCA--ACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAAAGTCAACACATAAG AAAAGGAAA-ATAAATGCTTGTGGCAT-----------------------------------------ATCAATGC--------------CTTTTGAAATATATATTTGTGGTCACATCATAAA Size Hit Count Total Norm

dp4 - 1 hit found