dme-mir-968- 12- and 20-way alignments

dme-mir-968	chr2L:13747748-13747839 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	antisense_to_intron

Legend:

   mature strand at position 13747801-13747824
   star strand at position 13747761-13747782
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr2L:13747733-13747854 -	TCAAAGAA-------------AAATTGT--TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAAC----AT-GC-AAATCAACCTTTTGATG--TACTACTT------------------------TAAGAATCTCCAGTTAAAGTCAACA---------------CA---------------TAAG
droSim1	chr2L:13506671-13506792 -	TCAAAGAA------A------AAATTGT--TCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAAC----AT-GC-AAATCAACCGTTTGATG--TACTACTT------------------------TAGGAATCTACAGTCAAAGTCAACA---------------T----------------TAAA
droSec1	super_3:14598-14719 -	TCAAAGAA------A------AAATTGT--TCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAAC----AT-GC-AAATCAACCGTTTGATG--TACTACTT------------------------TAGGAATCTACAGTCAAAGTCAACA---------------T----------------TAAA
droYak2	chr2L:10160053-10160172 -	TCAAGGAA-------------AAGTGTT--TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCA-C----AA-TA-AGATCAACCTTTTGATT--TACTACTT------------------------TAGGAATCTCCAGTCAAAGTCAACA---------------T----------------TAAT
droEre2	scaffold_4929:11718898-11719017 +	TCAAAGAA-------------AAGTTGT--TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCA-C----AA-TT-GAATCGACCGTTTAATG--TACTACTT------------------------TAAGAATCTCCAGTCAAAGTCAACA---------------A----------------TAAT
droAna3	scaffold_12943:1815541-1815651 -	CCTAAA------------------------TTATGGCAGTTTCCTTAAGTAGTATCCATTAAAGGGTCGTTAATA-T----AT-TC-AAAGTGACCGTTTGATG--TACTACTT------------------------TAGGTAGCTCCATTTAAAGTCGGCT---------------A----------------AAAT
dp4	chr4_group1:1722766-1722901 +	TTGAATAGTGATTTAGTTCTACAATT------GCTGCAGCTTCCTTAAGTAGTATCCATTAAGAGGTCGTCATCT-A----GC-TA-AAATCGACCTTTTGATG--TACTACTT------------------------TAAAAAAGCACAGTCAAAGTCAACA---------------GAACTGTG---------CGAT
droPer1	super_5:3483592-3483726 -	TTGAATAGTGATTTAGTTCCACAATT------GCTGCAGCTTCCTTAAGTAGTATCCATTAAGAGGTCGTCATCT-A----GC-TA-AAATCGACCTTTTGATG--TACTACTT------------------------TAAAAAGC-ACAGTCGAAGTCAACA---------------GAACTGTG---------CGAT
droWil1	scaffold_180772:545304-545419 +	TCGTGA----------------------------TGCAGATTCTTTAAGTAGTAACCTTTAAAGGGTCGTTTGTCCAATTCTTTTA-AAGTCGATCCTTTAAGT--TACTACTT------------------------GCAGAATGTGTTTCTGAAATCAACA---------------AAT--A-----------TAGA
droVir3	scaffold_12723:5043739-5043856 +	TTTAAGTA------TGTATCT------ATTATAT-------------TCAAGTATTCATTAATAATTAGTTTAATGC-----------------ACATTTTTAG--CTTTACTT------------------------TTAGACATTGCAATTTAAAATTATAAGTTATTTGTACACAG--CTA-----------TTCA
droMoj3	scaffold_6500:16663790-16663902 -	TGTttTtt------GtttTTT------TTTttTt-------------TTtTGttTTTTtTTTTtgTtttTTTtTGGC------------------------------------------AGAGTTATCATATATAATTTAATGCGTTATTATTTGAGTAGATAAAT------CTGAGAG--TAA-----------TTGA
droGri2	scaffold_15126:8057363-8057487 +	TGCAA-----------------------------TGAATGTACTTTAAGTAGTA--CACTAAAAGGTCGGTATAA-T----TT-ACAAAAACAACCTTTTAATGGTTACTACTTAAGGCATAGACAT---------------------TATTCTTAATCAATA---------------TAAT-ATTTAATAATAACACA

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr2L:13747733-13747854 -	NA	TCAAAGAAAAATTG----T--------TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACA-----TGCAA-----ATCAACCTTTTGATGTACTACTTTAAGAATCTCCAGTTAA-AGTC-----------------AACACAT--------------------------------------------------AAG
droSim1	chr2L:13506671-13506792 -	1	TCAAAGAAAAAATTG---T--------TCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACA-----TGCAA-----ATCAACCGTTTGATGTACTACTTTAGGAATCTACAGTCAA-AGTC-----------------AACATT---------------------------------------------------AAA
droSec1	super_3:14598-14719 -	1	TCAAAGAAAAAATTG---T--------TCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAACA-----TGCAA-----ATCAACCGTTTGATGTACTACTTTAGGAATCTACAGTCAA-AGTC-----------------AACATT---------------------------------------------------AAA
droYak2	chr2L:10160053-10160172 -	1	TCAAGGAAAAGTGT----T--------TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCACA------ATAAG-----ATCAACCTTTTGATTTACTACTTTAGGAATCTCCAGTCAA-AGTC-----------------AACATT---------------------------------------------------AAT
droEre2	scaffold_4929:11718898-11719017 +	3	TCAAAGAAAAGTTG----T--------TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCACA------ATTGA-----ATCGACCGTTTAATGTACTACTTTAAGAATCTCCAGTCAA-AGTC-----------------AACAAT---------------------------------------------------AAT
droEug1	scf7180000409452:319733-319851 -	2	TCGAGTAATGCT---------TCATAAATATTGCGGATTCTTTAAGTAGTAACCATTAAAGGGTTGTTCCTATA------AGATA-----ATCAACCTTTTGATGTACTACTTTAAGAAGCTGTAGTCGA-ATTC-----------------AACAT-------------------------------------------------------
droBia1	scf7180000302408:2583425-2583541 +	2	TAAGTGCAAAT----------------TTCTTGCAGTTTCCTTAAGTAGTAACCATTAAAGGGTTGTCATTATA------ATAAA-----ATCAACCGTTTGATGTACTACTTTAAGAAACTGCAGTCCA-TTTC-----------------TTCATTT--------------------------------------------------TAA
droTak1	scf7180000414072:20179-20357 +	2	TCGCATAATAGTTTGAGT---CCAAATTTATTGCAGTTTCCTTAAGTAGTAACCATTAAAGGGTTGTTATTATA------ATAAA-----ACCAACCGTTTGATGTACTACTTCAAGAAACTCCAGTCCT-CTTT-----------------TACATTTATTAGTAAATTGGAAAATTGTTTTTGAAATTTCAAAAAATCA-TACATTTAAG
droEle1	scf7180000491338:1357126-1357252 -	5	GCAAAGAATAGTTTA------CCATTAGAACTGCAGCTTCCTTAAGTAGTAACCATTAAAGGGTTGTCAAAATA------ATTGA-----ACCAACCATTTAATGTACTACTTTAAGAAACTCCAGACCA-TGCC-----------------AGTGTTT--------------------------------------------------AAA
droRho1	scf7180000780107:332476-332606 +	4	CCAAGGAATAGTTACAGT---GAATAAATTCTGCAGCTTCTTTAAGTAGTAACCATTAAAGGGTTGTTATAAAA------ATTGA-----GCCAACCATTTAATGTACTACTTTAATAATCTCCAGACAA-TGTC-----------------GCCGTTT-------------------------------------------------AAAG
droFic1	scf7180000448796:168-292 +	2	CAAATTAAGAACTTTACT---CAACAAATACTGCAGATTCCTTAAGTAGTAACCATTAAAGGGTTGTTAATCAG------ATAAA-----TCCAACCTTATGGTATACTACTTTAAGAAACTCTAGTTAT-ACAG-----------------AACA-------------------------------------------------------C
droKik1	scf7180000302236:231986-232127 +	2	CCAAGTGCTAATCTT----------CGGTATTGCAGTCTCTCTAAGTAGTATCCATTAAAGAGTCGTGATTATA------TTCAA-----ATCGACCTTGTGGTTTACTACCTTAAGAAACTTCAGTTTA-TTCC-----------------GGCTTTCAT-------------------------------ATAGAATCACTATCTTGAAT
droAna3	scaffold_12943:1815538-1815649 -	4	AAA------------------------TTATGGCAGTTTCCTTAAGTAGTATCCATTAAAGGGTCGTTAATATA------TTCAA-----AGTGACCGTTTGATGTACTACTTTAGGTAGCTCCATTTAA-AGTC-----------------GGCTAAAAT------------------------------------------------AAG
droBip1	scf7180000396728:1424183-1424317 +	2	TTGGAGGAAAGTTTGAAC---CCCAGGTGATGGCAGTTTCTTTAAGTAGTATCCATTAAAGGGTCGTTAACATAT-----TTAAA-----ATTGACCATTTAATGTACTACTTTGAGTAACTCCATATAA-AGTC-----------------GTCCAAGTT----------------------------------------------GAAAA
dp4	chr4_group1:1722766-1722895 +	2	TTGAATAGTGATTTAGTT---CTACAATTGCTGCAGCTTCCTTAAGTAGTATCCATTAAGAGGTCGTCATCTAG------CTAAA-----ATCGACCTTTTGATGTACTACTTTAAAAAAGCACAGTCAA-AGTC-----------------AACAGAA--------------------------------------------------CTG
droPer1	super_5:3483598-3483726 -	2	TTGAATAGTGATTTAGTT---CCACAATTGCTGCAGCTTCCTTAAGTAGTATCCATTAAGAGGTCGTCATCTAG------CTAAA-----ATCGACCTTTTGATGTACTACTTTAAAAAGC-ACAGTCGA-AGTC-----------------AACAGAA--------------------------------------------------CTG
droWil1	scaffold_180772:545302-545417 +	4	CTCGTG------------------------ATGCAGATTCTTTAAGTAGTAACCTTTAAAGGGTCGTTTGTCCAATTCTTTTAAA-----GTCGATCCTTTAAGTTACTACTTGCAGAATGTGTTTCTGA-AATC-----------------AACAAAT--------------------------------------------------ATA
droVir3	scaffold_12723:5043733-5043857 +	5	CCAAATTTTAAGTAT--------GTATCTATTA-----TATTCA---AGTATTCATTAATAATTAGTTTA--------------A-----TGCA--CATTTTTAGCTTTACTTTTAGACATTGCAATTTAAAATTATAAGTTATTTGTACACAGCTATT--------------------------------------------------CAA
droMoj3	scaffold_6500:16663801-16663917 -	12	TTATTAAAAAATTA----TTG------TAATAAGAAATTTTTT-AATATTATGAATT---------------TTATTTTACTAAATTTATGGCAGAGTTATCATATATAATTTAATGC-GTTATTATTTG-AGTA-----------------GATAAAT--------------------------------------------------CTG
droGri2	scaffold_15126:8057347-8057450 -	9	TCTAT---------------------------------GCCTTAAGTAGTAACCATTAAAAGGTTGTTTTTGTAA-----ATTAT-----ACCGACCTTTTAGTGTACTACTTAAAGTACATTCATTGCA-AGTC-----------------GACGAATAT------------------------------------------------ATA

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

TCAAAGAA-------------AAATTGT--TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAAC----AT-GC-AAATCAACCTTTTGATG--TACTACTT------------------------TAAGAATCTCCAGTTAAAGTCAACA---------------CA---------------TAAG

Size

Hit Count

Total Norm

droSim1

TCAAAGAA------A------AAATTGT--TCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAAC----AT-GC-AAATCAACCGTTTGATG--TACTACTT------------------------TAGGAATCTACAGTCAAAGTCAACA---------------T----------------TAAA	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
.............................................TAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	47580.00	25039.00	28.00	19.00	22494.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TAG..........................................................	22	1	1619.00	307.00	1.00	2.00	1309.00
.............................................TAAGTAGTATCCATTAAAGGGTGG..................................................................................................................................	24	1	1045.00	12.00	0.00	0.00	1033.00
.............................................TAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	23	1	578.00	545.00	0.00	0.00	33.00
.............................................TAAGTAGTATCCATTCAAGGGTTG..................................................................................................................................	24	1	279.00	277.00	0.00	0.00	2.00
.............................................TAAGTATTATCCATTAAAGGGTTG..................................................................................................................................	24	1	240.00	72.00	2.00	1.00	165.00
.............................................TAAGTAGTATCCATTAAAGGGGTG..................................................................................................................................	24	1	232.00	218.00	0.00	0.00	14.00
.............................................TAAGTAGTATCCATTAAAGGGCTG..................................................................................................................................	24	1	196.00	171.00	0.00	0.00	25.00
..............................................................................................CCGTTTGATG--TACTACTT------------------------TAGG.........................................................	22	1	172.00	5.00	0.00	0.00	167.00
.............................................TAAGTAGTATCCATTAAAGGGTTT..................................................................................................................................	24	1	160.00	155.00	0.00	0.00	5.00
.............................................TAAGTAGTATCCATTAAATGGTTG..................................................................................................................................	24	1	149.00	31.00	0.00	0.00	118.00
.............................................TAAGTAGTATCCATTAACGGGTTG..................................................................................................................................	24	1	115.00	114.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAACGGTTG..................................................................................................................................	24	1	104.00	42.00	0.00	0.00	62.00
.............................................TAAGTAGTATCCATTAAAGGGTTGT.................................................................................................................................	25	1	100.00	34.00	0.00	0.00	66.00
.............................................TAAGTAGTATCCATTAAAGGGT....................................................................................................................................	22	1	97.00	51.00	0.00	0.00	46.00
............................................TTAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	24	1	85.00	84.00	0.00	0.00	1.00
.............................................TAAGTAGTATACATTAAAGGGTTG..................................................................................................................................	24	1	83.00	79.00	0.00	0.00	4.00
.............................................TAAGTAGTCTCCATTAAAGGGTTG..................................................................................................................................	24	1	77.00	75.00	0.00	0.00	2.00
.............................................TAAGTAGTATCCATTAAAGTGTTG..................................................................................................................................	24	1	77.00	41.00	0.00	0.00	36.00
.............................................TAAGTAGTATCCATTACAGGGTTG..................................................................................................................................	24	1	76.00	76.00	0.00	0.00	0.00
...........................................................................................CAACCGTTTGATG--TACTACTT------------------------T............................................................	22	1	74.00	1.00	0.00	0.00	73.00
.............................................TAAGGAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	71.00	54.00	0.00	0.00	17.00
.............................................TAAGTACTATCCATTAAAGGGTTG..................................................................................................................................	24	1	62.00	4.00	0.00	0.00	58.00
.............................................TAAGTAGGATCCATTAAAGGGTTG..................................................................................................................................	24	1	61.00	45.00	0.00	0.00	16.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TA...........................................................	21	1	57.00	10.00	1.00	0.00	46.00
.............................................TAGGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	51.00	37.00	0.00	0.00	14.00
.............................................TAAGCAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	50.00	37.00	0.00	0.00	13.00
.............................................TAAGTAGTATCCATTAAAGGTTTG..................................................................................................................................	24	1	49.00	35.00	0.00	0.00	14.00
.............................................TAAGTAGTATCCATTTAAGGGTTG..................................................................................................................................	24	1	48.00	44.00	0.00	0.00	4.00
.............................................TAAGTAGTACCCATTAAAGGGTTG..................................................................................................................................	24	1	46.00	20.00	0.00	0.00	26.00
.............................................TAAGTAGTATACATTAAAGGGGTG..................................................................................................................................	24	1	44.00	44.00	0.00	0.00	0.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TAGA.........................................................	23	1	43.00	12.00	0.00	0.00	31.00
.............................................TAAGTAGTATCCATTGAAGGGTTG..................................................................................................................................	24	1	43.00	39.00	0.00	0.00	4.00
.............................................TAATTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	42.00	3.00	0.00	0.00	39.00
.............................................TAAGTAGTATCCGTTAAAGGGTTG..................................................................................................................................	24	1	41.00	35.00	0.00	0.00	6.00
.............................................TAAGTxxTATCCATTAAAGGGTTG..................................................................................................................................	22	1	41.00	0.00	0.00	0.00	41.00
................................................TAAGTATCCATTAAAGGGTTG..................................................................................................................................	21	1	40.00	0.00	0.00	0.00	40.00
.............................................TAAGTAGTATCCATTAAAGG......................................................................................................................................	20	1	40.00	18.00	0.00	0.00	22.00
.............................................TAAGTAGTATCCATTAAGGGGTTG..................................................................................................................................	24	1	40.00	33.00	0.00	0.00	7.00
..............................................AAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	23	1	39.00	25.00	0.00	0.00	14.00
.............................................TAAGTAGTATCCATTAAAGGTTG...................................................................................................................................	23	1	39.00	1.00	0.00	1.00	37.00
.............................................TAAGTAGTATCCATTAAAGGGTTGA.................................................................................................................................	25	1	38.00	33.00	0.00	0.00	5.00
.............................................TAAGTAGTGTCCATTAAAGGGTTG..................................................................................................................................	24	1	37.00	23.00	1.00	0.00	13.00
.............................................TAAGAAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	37.00	31.00	0.00	0.00	6.00
.............................................TAAGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	34.00	27.00	0.00	0.00	7.00
.............................................TAAGTGGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	31.00	24.00	0.00	0.00	7.00
.............................................TAAGTAGTATCCATTAGAGGGTTG..................................................................................................................................	24	1	31.00	24.00	0.00	0.00	7.00
.............................................TAAGTAGTATCTATTAAAGGGTTG..................................................................................................................................	24	1	30.00	28.00	0.00	0.00	2.00
.............................................TAAGTAGCATCCATTAAAGGGTTG..................................................................................................................................	24	1	30.00	12.00	0.00	0.00	18.00
.............................................TAAGTAGTATTCATTAAAGGGTTG..................................................................................................................................	24	1	30.00	25.00	0.00	0.00	5.00
.............................................TAAGTAGTATCCATTAAAGCGTTG..................................................................................................................................	24	1	29.00	13.00	0.00	0.00	16.00
.............................................TAAGTAGTATCCATTAAAGAGTTG..................................................................................................................................	24	1	29.00	17.00	0.00	0.00	12.00
.............................................TAAGTAGTATCCATTAAAAGGTTG..................................................................................................................................	24	1	29.00	21.00	0.00	0.00	8.00
.............................................TAAGTAGTATCCATTAAAGGGTTA..................................................................................................................................	24	1	29.00	16.00	0.00	0.00	13.00
.............................................TAAGTAGTATCCTTTAAAGGGTTG..................................................................................................................................	24	1	27.00	25.00	0.00	0.00	2.00
.............................................TAAGTAGTATCCCTTAAAGGGTTG..................................................................................................................................	24	1	26.00	25.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAAGGGTTGC.................................................................................................................................	25	1	25.00	19.00	0.00	0.00	6.00
.............................................TAAGTAGTATGCATTAAAGGGTTG..................................................................................................................................	24	1	21.00	21.00	0.00	0.00	0.00
.............................................CAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	21.00	18.00	0.00	0.00	3.00
.............................................TAAGTAGTATCAATTAAAGGGTTG..................................................................................................................................	24	1	20.00	17.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCACTAAAGGGTTG..................................................................................................................................	24	1	20.00	14.00	0.00	0.00	6.00
.............................................TAAGTAGAATCCATTAAAGGGTTG..................................................................................................................................	24	1	20.00	8.00	0.00	0.00	12.00
.............................................TAAGTAGTATCCATTAAAGGGTTC..................................................................................................................................	24	1	20.00	16.00	0.00	0.00	4.00
.............................................TAAGTAGTATCCATCAAAGGGTTG..................................................................................................................................	24	1	20.00	17.00	0.00	0.00	3.00
.............................................TAACTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	19.00	1.00	0.00	0.00	18.00
...............................................AGTAGTATCCATTAAAGGGTTG..................................................................................................................................	22	1	19.00	6.00	0.00	0.00	13.00
.............................................TAAGTAGTATCCATTTAAGGGGTG..................................................................................................................................	24	1	19.00	19.00	0.00	0.00	0.00
............................................................................................AACCGTTTGATG--TACTACTT------------------------TAG..........................................................	23	1	19.00	3.00	0.00	0.00	16.00
..............................................................................................CCGTTTGATG--TACTACTT------------------------TAG..........................................................	21	1	19.00	3.00	0.00	0.00	16.00
.............................................TAAGTAGTATCCATTAAAGGGATG..................................................................................................................................	24	1	18.00	12.00	0.00	0.00	6.00
.............................................TGAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	18.00	14.00	0.00	0.00	4.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TAGC.........................................................	23	1	18.00	1.00	0.00	0.00	17.00
.............................................TAAGTAGTATCCATTAAAG.......................................................................................................................................	19	1	16.00	5.00	0.00	0.00	11.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TAGAA........................................................	24	1	15.00	1.00	0.00	0.00	14.00
.............................................TAAGTAGTATCCATTAAAGGGGTT..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGCTTG..................................................................................................................................	24	1	15.00	9.00	0.00	0.00	6.00
.............................................GAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	15.00	12.00	0.00	0.00	3.00
.............................................TAAGTAxTATCCATTAAAGGGTTG..................................................................................................................................	23	1	15.00	0.00	0.00	0.00	15.00
.............................................TAAGTAGTATCCATTCACGGGTTG..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00
............................................CTAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	25	1	15.00	14.00	0.00	0.00	1.00
.............................................TAAGTAGTCTCCATTCAAGGGTTG..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00
.............................................TCAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	14.00	14.00	0.00	0.00	0.00
.............................................TAAGTAATATCCATTAAAGGGTTG..................................................................................................................................	24	1	13.00	11.00	0.00	0.00	2.00
.............................................TAAGGAGTATCCATTAAAGGGGTG..................................................................................................................................	24	1	13.00	13.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGG.....................................................................................................................................	21	1	13.00	8.00	0.00	0.00	5.00
.............................................TAAGTAGTATCCATTACAGGGTT...................................................................................................................................	23	1	12.00	12.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTxAAGGGTTG..................................................................................................................................	23	1	12.00	10.00	0.00	0.00	2.00
.............................................TAAGTAGTATCCATTATAGGGTTG..................................................................................................................................	24	1	12.00	11.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAAGGGGT...................................................................................................................................	23	1	11.00	11.00	0.00	0.00	0.00
.............................................TAAGTAGTTTCCATTAAAGGGTTG..................................................................................................................................	24	1	11.00	10.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAAGGATTG..................................................................................................................................	24	1	11.00	10.00	0.00	0.00	1.00
.............................................TAAGTAGTAGCCATTAAAGGGTTG..................................................................................................................................	24	1	11.00	9.00	0.00	0.00	2.00
.............................................TAAGTAGTATCGATTAAAGGGTTG..................................................................................................................................	24	1	11.00	9.00	0.00	0.00	2.00
...........................................................................................CAACCGTTTGATG--TACTACTT------------------------TAG..........................................................	24	1	11.00	0.00	0.00	0.00	11.00
.............................................TAAGTAGGATCCATTAAAGGGGTG..................................................................................................................................	24	1	11.00	11.00	0.00	0.00	0.00
.............................................TAAGTAGGATACATTAAAGGGTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................AAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	10.00	8.00	0.00	0.00	2.00
.............................................TAAGTAGTATCCATTAAATGGTTT..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTAG..................................................................................................................................	24	1	10.00	7.00	0.00	0.00	3.00
..............................................................................................CCGTTTGATG--TACTACTT------------------------TAGT.........................................................	22	1	9.00	2.00	0.00	0.00	7.00

droSec1

TCAAAGAA------A------AAATTGT--TCATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTTCTCAAC----AT-GC-AAATCAACCGTTTGATG--TACTACTT------------------------TAGGAATCTACAGTCAAAGTCAACA---------------T----------------TAAA	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
.............................................TAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	129635.00	6.00	129123.00	506.00
.............................................TAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	23	1	2931.00	2.00	2914.00	15.00
............................................TTAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	24	1	682.00	0.00	679.00	3.00
.............................................TAAGTAGTATCCATTAAAGGGT....................................................................................................................................	22	1	430.00	1.00	426.00	3.00
.............................................TAAGTAGTATCCATTAAAGGGTTGT.................................................................................................................................	25	1	408.00	0.00	406.00	2.00
.............................................TAAGTAGTATCCATTAAAGGGTTGA.................................................................................................................................	25	1	351.00	0.00	351.00	0.00
.............................................TAAGTAGTATCCATTxAAGGGTTG..................................................................................................................................	23	1	276.00	0.00	276.00	0.00
.............................................TAAGTAGTATCTATTAAAGGGTTG..................................................................................................................................	24	1	270.00	0.00	269.00	1.00
.............................................TAAGTAGTATTCATTAAAGGGTTG..................................................................................................................................	24	1	201.00	0.00	201.00	0.00
.............................................TAAGTAGTATCCATTTAAGGGTTG..................................................................................................................................	24	1	182.00	0.00	180.00	2.00
.............................................TAGGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	173.00	0.00	173.00	0.00
.............................................TAAGTAGTATCCATTAAGGGGTTG..................................................................................................................................	24	1	173.00	0.00	173.00	0.00
.............................................TAAGTAGTATCCATTAAAAGGTTG..................................................................................................................................	24	1	168.00	0.00	167.00	1.00
.............................................TAAGTAGTATCCGTTAAAGGGTTG..................................................................................................................................	24	1	154.00	0.00	154.00	0.00
.............................................TAAGTAGTACCCATTAAAGGGTTG..................................................................................................................................	24	1	154.00	0.00	153.00	1.00
.............................................TAAGCAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	139.00	0.00	139.00	0.00
.............................................TAAGTAGTATCCATTAAAGG......................................................................................................................................	20	1	138.00	0.00	138.00	0.00
.............................................TAAGTAGTGTCCATTAAAGGGTTG..................................................................................................................................	24	1	135.00	0.00	134.00	1.00
.............................................TAAGTAGCATCCATTAAAGGGTTG..................................................................................................................................	24	1	122.00	0.00	122.00	0.00
.............................................TAAGTAGTATCCATTAGAGGGTTG..................................................................................................................................	24	1	120.00	0.00	119.00	1.00
.............................................TAAGTAGTATCCATCAAAGGGTTG..................................................................................................................................	24	1	120.00	0.00	119.00	1.00
.............................................TAAGTAGTATCCATTAAAGGGCTG..................................................................................................................................	24	1	118.00	0.00	118.00	0.00
.............................................TAAGTGGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	116.00	0.00	116.00	0.00
.............................................TAAGTAGTATCCATTAAAGGG.....................................................................................................................................	21	1	116.00	0.00	116.00	0.00
.............................................TAAGTACTATCCATTAAAGGGTTG..................................................................................................................................	24	1	115.00	0.00	115.00	0.00
..............................................AAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	23	1	114.00	0.00	113.00	1.00
............................................CTAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	25	1	113.00	0.00	112.00	1.00
.............................................TAAGTATTATCCATTAAAGGGTTG..................................................................................................................................	24	1	109.00	0.00	109.00	0.00
.............................................TAAGTAGTATCCATTAAAGGTTTG..................................................................................................................................	24	1	108.00	0.00	108.00	0.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TAG..........................................................	22	1	107.00	0.00	107.00	0.00
.............................................TAAGTAGTATCCATAAAAGGGTTG..................................................................................................................................	24	1	101.00	0.00	101.00	0.00
.............................................CAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	101.00	0.00	101.00	0.00
.............................................TAAGTAGTATCCATTGAAGGGTTG..................................................................................................................................	24	1	100.00	0.00	99.00	1.00
.............................................TAAGTAGTATCCATTAAAGGGTTGC.................................................................................................................................	25	1	98.00	0.00	98.00	0.00
.............................................TAAGTxxTATCCATTAAAGGGTTG..................................................................................................................................	22	1	97.00	0.00	97.00	0.00
.............................................TAAGTAGTATCCATTAATGGGTTG..................................................................................................................................	24	1	91.00	0.00	90.00	1.00
.............................................TACGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	87.00	0.00	86.00	1.00
.............................................TAAGTAGTATACATTAAAGGGTTG..................................................................................................................................	24	1	87.00	0.00	86.00	1.00
.............................................TAAGTAGTATCCATTAAAGTGTTG..................................................................................................................................	24	1	86.00	0.00	85.00	1.00
...............................................AGTAGTATCCATTAAAGGGTTG..................................................................................................................................	22	1	85.00	0.00	85.00	0.00
.............................................TAAGTAGTATCCACTAAAGGGTTG..................................................................................................................................	24	1	77.00	0.00	77.00	0.00
................................................TAAGTATCCATTAAAGGGTTG..................................................................................................................................	21	1	77.00	0.00	77.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	76.00	0.00	76.00	0.00
.............................................TGAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	75.00	0.00	75.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTA..................................................................................................................................	24	1	72.00	0.00	71.00	1.00
.............................................TAAGTAGTATCAATTAAAGGGTTG..................................................................................................................................	24	1	70.00	0.00	70.00	0.00
.............................................TAAGTAGTATCCATTAAAGGTTG...................................................................................................................................	23	1	64.00	0.00	64.00	0.00
..............................................TAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	23	1	63.00	0.00	63.00	0.00
.............................................TAAGTAGTATCCATTAAAGCGTTG..................................................................................................................................	24	1	62.00	0.00	61.00	1.00
.............................................TAAGTAGTATCCATTAAATGGTTG..................................................................................................................................	24	1	62.00	0.00	60.00	2.00
.............................................TAAGTAGTATCCATTAAAGGCTTG..................................................................................................................................	24	1	61.00	0.00	61.00	0.00
.............................................TAACTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	60.00	0.00	60.00	0.00
.............................................TAAGAAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	60.00	0.00	58.00	2.00
.............................................TAAGTAGTATCCATTACAGGGTTG..................................................................................................................................	24	1	60.00	0.00	60.00	0.00
.............................................TAAGTAGTATCCATTAAAGAGTTG..................................................................................................................................	24	1	58.00	0.00	56.00	2.00
.............................................TAAGTAGTATCCATTCAAGGGTTG..................................................................................................................................	24	1	57.00	0.00	57.00	0.00
.............................................TATGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	54.00	0.00	53.00	1.00
.............................................TAAGTAATATCCATTAAAGGGTTG..................................................................................................................................	24	1	54.00	0.00	52.00	2.00
.............................................TCAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	50.00	0.00	50.00	0.00
.............................................TAAGTAGTTTCCATTAAAGGGTTG..................................................................................................................................	24	1	48.00	0.00	48.00	0.00
.............................................TAAGTTGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	46.00	0.00	46.00	0.00
.............................................TAAGTAGTATCCCTTAAAGGGTTG..................................................................................................................................	24	1	46.00	0.00	46.00	0.00
.............................................TAATTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	45.00	0.00	45.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTT..................................................................................................................................	24	1	44.00	0.00	44.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTC..................................................................................................................................	24	1	42.00	0.00	42.00	0.00
.............................................TAAGTAGTATCCATTAAAGGATTG..................................................................................................................................	24	1	41.00	0.00	41.00	0.00
.............................................TAAGTAGTAACCATTAAAGGGTTG..................................................................................................................................	24	1	40.00	0.00	40.00	0.00
.............................................TAAGTAGTATCCATTAAACGGTTG..................................................................................................................................	24	1	40.00	0.00	39.00	1.00
.............................................TAAGTAGTATCCAATAAAGGGTTG..................................................................................................................................	24	1	38.00	0.00	38.00	0.00
.............................................TAAGTAGTATCCATTAACGGGTTG..................................................................................................................................	24	1	38.00	0.00	37.00	1.00
.............................................TAAGTAGTATCCATTATAGGGTTG..................................................................................................................................	24	1	37.00	0.00	37.00	0.00
.............................................TAAGTAGAATCCATTAAAGGGTTG..................................................................................................................................	24	1	36.00	0.00	35.00	1.00
.............................................TAAGTAGTCTCCATTAAAGGGTTG..................................................................................................................................	24	1	34.00	0.00	34.00	0.00
.................................................TAGTATCCATTAAAGGGTTG..................................................................................................................................	20	1	34.00	0.00	34.00	0.00
.............................................GAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	31.00	0.00	31.00	0.00
.............................................TAAGTAGTATCCATTAAAG.......................................................................................................................................	19	1	31.00	0.00	31.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTTG.................................................................................................................................	25	1	30.00	0.00	30.00	0.00
.............................................TAAGTAGTATCCATTxxAGGGTTG..................................................................................................................................	22	1	29.00	0.00	29.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGGTG..................................................................................................................................	24	1	26.00	0.00	26.00	0.00
.............................................TAAATAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	22.00	0.00	22.00	0.00
.............................................TAAGTAGTATCCTTTAAAGGGTTG..................................................................................................................................	24	1	21.00	0.00	20.00	1.00
.............................................TAAGTAGTATCGATTAAAGGGTTG..................................................................................................................................	24	1	19.00	0.00	19.00	0.00
.............................................TAAGTAxTATCCATTAAAGGGTTG..................................................................................................................................	23	1	18.00	0.00	18.00	0.00
............................................TTAAGTAGTATCCATTAAAGGGT....................................................................................................................................	23	1	18.00	0.00	18.00	0.00
............................................TTAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	25	1	18.00	0.00	18.00	0.00
.............................................TAAGGAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	16.00	0.00	16.00	0.00
.............................................TAAGTAGTATCCAxTAAAGGGTTG..................................................................................................................................	23	1	15.00	0.00	15.00	0.00
...........................................TCTAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	26	1	15.00	0.00	15.00	0.00
.............................................TAAGTAGTATGCATTAAAGGGTTG..................................................................................................................................	24	1	14.00	0.00	14.00	0.00
.............................................AAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	14.00	0.00	14.00	0.00
.............................................TAAGTxGTATCCATTAAAGGGTTG..................................................................................................................................	23	1	13.00	0.00	13.00	0.00
.............................................TAAGTCGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	13.00	0.00	13.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTAG..................................................................................................................................	24	1	13.00	0.00	13.00	0.00
.............................................TAAGTAGTATCCAGTAAAGGGTTG..................................................................................................................................	24	1	12.00	0.00	12.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTGG..................................................................................................................................	24	1	11.00	0.00	10.00	1.00
.............................................TAAGTAGTATCCATTAAAGGGATG..................................................................................................................................	24	1	11.00	0.00	11.00	0.00
.............................................TAAGTAGTATxCATTAAAGGGTTG..................................................................................................................................	23	1	11.00	0.00	11.00	0.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TA...........................................................	21	1	10.00	0.00	10.00	0.00
.............................................TTAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	10.00	0.00	10.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTGTA................................................................................................................................	26	1	10.00	1.00	9.00	0.00

droYak2

TCAAGGAA-------------AAGTGTT--TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCA-C----AA-TA-AGATCAACCTTTTGATT--TACTACTT------------------------TAGGAATCTCCAGTCAAAGTCAACA---------------T----------------TAAT	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
.............................................TAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	15225.00	15169.00	14.00	0.00	40.00	2.00
.............................................TAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	23	1	223.00	220.00	1.00	0.00	2.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGGTG..................................................................................................................................	24	1	99.00	99.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTCAAGGGTTG..................................................................................................................................	24	1	97.00	96.00	0.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGCTG..................................................................................................................................	24	1	85.00	85.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTT..................................................................................................................................	24	1	67.00	65.00	1.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAACGGGTTG..................................................................................................................................	24	1	62.00	62.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATACATTAAAGGGTTG..................................................................................................................................	24	1	49.00	49.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCTATTAAAGGGTTG..................................................................................................................................	24	1	39.00	39.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTCTCCATTAAAGGGTTG..................................................................................................................................	24	1	37.00	37.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGT....................................................................................................................................	22	1	35.00	35.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGATG..................................................................................................................................	24	1	29.00	29.00	0.00	0.00	0.00	0.00
.............................................TAAGTATTATCCATTAAAGGGTTG..................................................................................................................................	24	1	27.00	27.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGGATCCATTAAAGGGTTG..................................................................................................................................	24	1	26.00	26.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAAGGTTG..................................................................................................................................	24	1	25.00	25.00	0.00	0.00	0.00	0.00
.............................................................................................ACCTTTTGATT--TACTACTT------------------------TAG..........................................................	22	1	25.00	25.00	0.00	0.00	0.00	0.00
.............................................TAAGGAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	23.00	22.00	0.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTACAGGGTTG..................................................................................................................................	24	1	22.00	22.00	0.00	0.00	0.00	0.00
.............................................TAGGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	21.00	20.00	0.00	0.00	1.00	0.00
.............................................TAAGTAGTATACATTAAAGGGGTG..................................................................................................................................	24	1	20.00	20.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCGTTAAAGGGTTG..................................................................................................................................	24	1	20.00	20.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAGAGGGTTG..................................................................................................................................	24	1	20.00	20.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGGGGTTG..................................................................................................................................	24	1	19.00	19.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTGT.................................................................................................................................	25	1	19.00	19.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTGTCCATTAAAGGGTTG..................................................................................................................................	24	1	17.00	17.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTGAAGGGTTG..................................................................................................................................	24	1	17.00	17.00	0.00	0.00	0.00	0.00
.............................................CAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	16.00	16.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTTAAGGGTTG..................................................................................................................................	24	1	16.00	16.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGTTTG..................................................................................................................................	24	1	16.00	15.00	0.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAACGGTTG..................................................................................................................................	24	1	16.00	15.00	0.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATCAAAGGGTTG..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00	0.00
.............................................TAAGAAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGTGTTG..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGCATCCATTAAAGGGTTG..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00	0.00
.............................................TAAGCAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	14.00	14.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGAGTTG..................................................................................................................................	24	1	14.00	14.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCCTTAAAGGGTTG..................................................................................................................................	24	1	14.00	13.00	0.00	0.00	1.00	0.00
.............................................................................................ACCTTTTGATT--TACTACTT------------------------TAGT.........................................................	23	1	14.00	14.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTA..................................................................................................................................	24	1	14.00	14.00	0.00	0.00	0.00	0.00
..............................................AAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	23	1	13.00	13.00	0.00	0.00	0.00	0.00
............................................CTAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	25	1	12.00	12.00	0.00	0.00	0.00	0.00
.............................................TCAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	12.00	12.00	0.00	0.00	0.00	0.00
.............................................TAAGTGGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	11.00	11.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	11.00	11.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAATGGTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGATTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTC..................................................................................................................................	24	1	10.00	9.00	0.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCTTTAAAGGGTTG..................................................................................................................................	24	1	9.00	8.00	0.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGGTT..................................................................................................................................	24	1	9.00	9.00	0.00	0.00	0.00	0.00
.............................................TGAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTACCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCACTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGCGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGGATACATTAAAGGGTTG..................................................................................................................................	24	1	7.00	7.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTTTCCATTAAAGGGTTG..................................................................................................................................	24	1	7.00	7.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTCACGGGTTG..................................................................................................................................	24	1	7.00	7.00	0.00	0.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	24	1	7.00	7.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTGA.................................................................................................................................	25	1	7.00	7.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATACATTAAAGGGCTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATTCATTAAAGGGTTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATGCATTAAAGGGTTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTTAAGGGGTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGG.....................................................................................................................................	21	1	6.00	6.00	0.00	0.00	0.00	0.00
.............................................TAAGGAGTATCCATTAAAGGGGTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00	0.00
.............................................AAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTCTCCATTAACGGGTTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00	0.00
.............................................TAAGGAGTATCCATTAAAGGGCTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTAG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00	0.00
.............................................TAAGTAATATCCATTAAAGGGTTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGGT...................................................................................................................................	23	1	5.00	5.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATGAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCAATTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTCTCCATTCAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTATTATCCATTAAAGGGTTT..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAACGGGTTT..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTGC.................................................................................................................................	25	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCGATTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTAACCATTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TACGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
..........................TT--TGATGCAAGCTTCTTTA........................................................................................................................................................	19	1	4.00	0.00	1.00	0.00	3.00	0.00
.............................................TAAGTAGGATCCATTAAAGGGGTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTCAAGGGCTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGGATCCGTTAAAGGGTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGAGATG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGG......................................................................................................................................	20	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TGAGTAGTATCCATTAAAGGGCTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCAGTAAAGGGTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTTGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGCTC..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	25	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATGAAAGGGGTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATACATTAAAAGGTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGCTT..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTACAGGGTT...................................................................................................................................	23	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTCTCCATTTAAGGGTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
..........................TT--TGATGCAAGCTTCTTT.........................................................................................................................................................	18	1	3.00	0.00	2.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGATA..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTGG..................................................................................................................................	24	1	3.00	2.00	0.00	0.00	0.00	1.00
.............................................GAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00	0.00

droEre2

TCAAAGAA-------------AAGTTGT--TGATGGAAGCTTCCTTAAGTAGTATCCATTAAAGGGTTGTGGTCA-C----AA-TT-GAATCGACCGTTTAATG--TACTACTT------------------------TAAGAATCTCCAGTCAAAGTCAACA---------------A----------------TAAT	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
.............................................TAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	7707.00	7686.00	0.00	3.00	18.00
.............................................TAAGTAGTATCCATTAAAGGGTTT..................................................................................................................................	24	1	385.00	385.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	23	1	168.00	166.00	0.00	0.00	2.00
.............................................TAAGTAGTATCCATTAAAGTGTTG..................................................................................................................................	24	1	167.00	167.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAATGGTTG..................................................................................................................................	24	1	117.00	116.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAAGGTTTG..................................................................................................................................	24	1	75.00	75.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGCTG..................................................................................................................................	24	1	66.00	66.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGGTG..................................................................................................................................	24	1	59.00	59.00	0.00	0.00	0.00
.............................................TAAGTAGTAACCATTAAGGGGTTG..................................................................................................................................	24	1	54.00	0.00	0.00	54.00	0.00
.............................................................................................ACCGTTTAATG--TACTACTT------------------------TAA..........................................................	22	1	39.00	39.00	0.00	0.00	0.00
.............................................TAAGGAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	38.00	38.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAACGGTTG..................................................................................................................................	24	1	36.00	36.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGCGTTG..................................................................................................................................	24	1	35.00	35.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGTGTTT..................................................................................................................................	24	1	33.00	33.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAATGGTTT..................................................................................................................................	24	1	30.00	30.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAACGGGTTG..................................................................................................................................	24	1	28.00	28.00	0.00	0.00	0.00
.............................................TAAGTATTATCCATTAAAGGGTTG..................................................................................................................................	24	1	28.00	28.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTACAGGGTTG..................................................................................................................................	24	1	27.00	27.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGT....................................................................................................................................	22	1	26.00	26.00	0.00	0.00	0.00
.............................................TAAGTAGGATCCATTAAAGGGTTG..................................................................................................................................	24	1	25.00	25.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAAGGTTG..................................................................................................................................	24	1	24.00	24.00	0.00	0.00	0.00
.............................................TAAGTAGTAACCATTAAAAGGTTG..................................................................................................................................	24	1	24.00	0.00	0.00	24.00	0.00
.............................................TAAGTAGTATCCATTAAAGAGTTG..................................................................................................................................	24	1	22.00	22.00	0.00	0.00	0.00
.............................................TAAGCAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	21.00	21.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTCAAGGGTTG..................................................................................................................................	24	1	19.00	19.00	0.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	24	1	19.00	19.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGTTTT..................................................................................................................................	24	1	17.00	17.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGATTG..................................................................................................................................	24	1	17.00	17.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCCTTAAAGGGTTG..................................................................................................................................	24	1	16.00	16.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGCTTG..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTC..................................................................................................................................	24	1	15.00	15.00	0.00	0.00	0.00
.............................................TAAGTAGCATCCATTAAAGGGTTG..................................................................................................................................	24	1	14.00	14.00	0.00	0.00	0.00
.............................................TAATTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	13.00	13.00	0.00	0.00	0.00
...............................................AGTAGTATCCATTAAAGGGTTG..................................................................................................................................	22	1	13.00	13.00	0.00	0.00	0.00
.............................................TAAGTAGTGTCCATTAAAGGGTTG..................................................................................................................................	24	1	11.00	11.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGGGGTTG..................................................................................................................................	24	1	11.00	11.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGATG..................................................................................................................................	24	1	11.00	11.00	0.00	0.00	0.00
.............................................CAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................TAAGTAGTATACATTAAAGGGTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCACTAAAGGGTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................TAGGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTTAAGGGTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTTG..................................................................................................................................	24	1	10.00	0.00	0.00	10.00	0.00
.............................................TAAGTAGTATCCATTAAATGTTTG..................................................................................................................................	24	1	10.00	10.00	0.00	0.00	0.00
.............................................TGAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	9.00	9.00	0.00	0.00	0.00
.............................................TAAGTAGTATTCATTAAAGGGTTG..................................................................................................................................	24	1	9.00	9.00	0.00	0.00	0.00
.............................................TAACTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	9.00	9.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTA..................................................................................................................................	24	1	9.00	9.00	0.00	0.00	0.00
.............................................TAAGTGGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTAGTACCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
............................................CTAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	25	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGG.....................................................................................................................................	21	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGAAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	7.00	1.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTGT.................................................................................................................................	25	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTAATATCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTGAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGCTT..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
.............................................GAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTACTATCCATTAAAGGGTTG..................................................................................................................................	24	1	8.00	8.00	0.00	0.00	0.00
.............................................TAAGTAGTATCTATTAAAGGGTTG..................................................................................................................................	24	1	7.00	7.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAATTGTTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAAGGTTT..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00
.............................................TAATTAGTATCCATTAAAGGGTTT..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATCAAAGGGTTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGGTT..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00
.............................................TATGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	6.00	6.00	0.00	0.00	0.00
.............................................TAAGTATTATCCATTAAATGGTTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
.............................................TAAGTATTATCCATTAAAGGGTTT..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAACTGTTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCGTTAAAGGGTTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
.............................................TAAGAAGTATCCATTAAAGGGTTT..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
...........................T--TGATGCAAGCTTCTTTA........................................................................................................................................................	18	1	5.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTGG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAGAGGGTTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
.............................................TACGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	5.00	5.00	0.00	0.00	0.00
.............................................TAAGGAGGATCCATTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTCTCCATTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
..............................................AAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	23	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAATGATTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATGAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATACATTAAAGTGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGGAGTATCCATTAAATGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCTTTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGTCTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTCGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCAATAAAGGGTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGCCTTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTGC.................................................................................................................................	25	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTCAAGGGTTT..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAG......................................................................................................................................	20	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTTGA.................................................................................................................................	25	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGTGCTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAATGGCTG..................................................................................................................................	24	1	4.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTxAAGGGTTG..................................................................................................................................	23	1	3.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAACGCTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAACGGTTT..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGTTTTG..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGCGTTT..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAAGGTTC..................................................................................................................................	24	1	3.00	3.00	0.00	0.00	0.00

droAna3

CCTAAA------------------------TTATGGCAGTTTCCTTAAGTAGTATCCATTAAAGGGTCGTTAATA-T----AT-TC-AAAGTGACCGTTTGATG--TACTACTT------------------------TAGGTAGCTCCATTTAAAGTCGGCT---------------A----------------AAAT	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
.............................................TAAGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	1695.00	14.00	41.00	11.00	1629.00
.............................................TAAGTAGTATCCATTAAAGGGTTG..................................................................................................................................	24	1	134.00	12.00	17.00	0.00	105.00
.............................................TAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	57.00	0.00	0.00	0.00	57.00
.............................................TAAGTAGTATCCATTAAAGGGTC...................................................................................................................................	23	1	42.00	0.00	0.00	0.00	42.00
.............................................TAAGTAGTATCCATTAAAGTGTCG..................................................................................................................................	24	1	38.00	0.00	0.00	0.00	38.00
.............................................TAAGTAGTATCCATTAAAGGGTCT..................................................................................................................................	24	1	33.00	0.00	0.00	0.00	33.00
.............................................TAAGTAGTATCCATTAAATGGTCG..................................................................................................................................	24	1	27.00	0.00	0.00	1.00	26.00
.............................................TAAGTAGTAACCATTAAAAGGTCG..................................................................................................................................	24	1	23.00	0.00	0.00	0.00	23.00
.............................................TAAGTAGTATCCATTAAAGGTTCG..................................................................................................................................	24	1	20.00	0.00	0.00	0.00	20.00
.............................................TAAGTAGTATCCATTAAAGGGTCC..................................................................................................................................	24	1	19.00	0.00	0.00	0.00	19.00
.............................................TAAGTAGTATCCATTACAGGGTCG..................................................................................................................................	24	1	15.00	0.00	0.00	0.00	15.00
.............................................TAAGTAGTATCCATTAACGGGTCG..................................................................................................................................	24	1	13.00	0.00	0.00	0.00	13.00
.............................................TAAGGAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	10.00	0.00	0.00	0.00	10.00
.............................................TAAGTAGTATCCATTAAAGGGGCG..................................................................................................................................	24	1	10.00	0.00	0.00	0.00	10.00
.............................................TAAGTAGTATCCATTAAAGG......................................................................................................................................	20	1	10.00	0.00	0.00	0.00	10.00
.............................................TAAGTAGTATCCATTAAAGGGT....................................................................................................................................	22	1	10.00	0.00	1.00	0.00	9.00
.............................................TAAGTAGTATCCATTAAAG.......................................................................................................................................	19	1	9.00	0.00	0.00	0.00	9.00
.............................................TAAGTAGTATCCATTAAAGGGTTT..................................................................................................................................	24	1	9.00	0.00	2.00	0.00	7.00
.............................................TAAGTAGTATCCATTCAAGGGTCG..................................................................................................................................	24	1	9.00	0.00	0.00	0.00	9.00
.............................................TAAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	9.00	0.00	9.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGCGTCG..................................................................................................................................	24	1	8.00	0.00	0.00	0.00	8.00
.............................................TAAGTAGGATCCATTAAAGGGTCG..................................................................................................................................	24	1	8.00	0.00	0.00	0.00	8.00
.............................................TAAGTAGCATCCATTAAAGGGTCG..................................................................................................................................	24	1	8.00	0.00	0.00	0.00	8.00
.............................................................................................ACCGTTTGATG--TACTACTT------------------------TAG..........................................................	22	1	8.00	0.00	0.00	0.00	8.00
.............................................TAAGTAGTATCCATTAAACGGTCG..................................................................................................................................	24	1	7.00	0.00	0.00	0.00	7.00
.............................................TAAGTAGTATCCATTAAATGGTTG..................................................................................................................................	24	1	7.00	0.00	2.00	0.00	5.00
.............................................TAAGTAGTATCCATTAAAGGGCCG..................................................................................................................................	24	1	7.00	0.00	0.00	0.00	7.00
.............................................TAAGTAGTATCCATTAAAGGGTT...................................................................................................................................	23	1	6.00	0.00	0.00	0.00	6.00
.............................................TAAGAAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	6.00	0.00	0.00	0.00	6.00
.............................................TAAGTAGTATCCATTAAAAGGTCG..................................................................................................................................	24	1	6.00	0.00	0.00	0.00	6.00
.............................................TAGGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	5.00	0.00	0.00	0.00	5.00
.............................................TAAGTAGTATCCATTAAAGGCTCG..................................................................................................................................	24	1	5.00	0.00	0.00	0.00	5.00
.............................................TAAGTAGTACCCATTAAAGGGTCG..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGTAGTATCCATTAAAGGTTTG..................................................................................................................................	24	1	4.00	1.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTTAAGGGTCG..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGCAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGTAGTCTCCATTAAAGGGTCG..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGTAGTATCCATTAAGGGGTCG..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
...............................................AGTAGTATCCATTAAAGGGTCG..................................................................................................................................	22	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGTAGTATCCATTAAAGGATCG..................................................................................................................................	24	1	4.00	0.00	1.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAAGTGTCT..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGTATTATCCATTAAAGGGTCG..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGTAGTATCCATTAAAGGTTCC..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
.............................................TAAGTAGTATCCATTAAATGTTCG..................................................................................................................................	24	1	4.00	0.00	0.00	0.00	4.00
..............................................................................................CCGTTTGATG--TACTACTT------------------------TAGG.........................................................	22	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAAGAGTCG..................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAAGGGTCGC.................................................................................................................................	25	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTACAGGGTCC..................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAAGGTTCT..................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAAGTTTCG..................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAA........................................................................................................................................	18	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAAGTGTC...................................................................................................................................	23	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCATTAAAGGGTAG..................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCGTTAAAGGGTCG..................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCTATTAAAGGGTCG..................................................................................................................................	24	1	3.00	0.00	0.00	0.00	3.00

dp4

TTGAATAGTGATTTAGTTCTACAATT------GCTGCAGCTTCCTTAAGTAGTATCCATTAAGAGGTCGTCATCT-A----GC-TA-AAATCGACCTTTTGATG--TACTACTT------------------------TAAAAAAGCACAGTCAAAGTCAACA---------------GAACTGTG---------CGAT	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
.............................................TAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	28738.00	12.00	28717.00	8.00	1.00
............................................TTAAGTAGTATCCATTAAGAGGTC...................................................................................................................................	24	1	559.00	0.00	559.00	0.00	0.00
..............................................AAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	23	1	552.00	1.00	550.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAGCGGTCG..................................................................................................................................	24	1	449.00	0.00	449.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTC...................................................................................................................................	23	1	280.00	0.00	278.00	2.00	0.00
..............................................AAGTAGTATCCATTAAGAGGTCGT.................................................................................................................................	24	1	279.00	0.00	279.00	0.00	0.00
.............................................TAAGTAGTATCCATTCAGAGGTCG..................................................................................................................................	24	1	259.00	0.00	259.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGGCG..................................................................................................................................	24	1	204.00	0.00	204.00	0.00	0.00
.............................................TAAGTAGTCTCCATTAAGAGGTCG..................................................................................................................................	24	1	195.00	0.00	195.00	0.00	0.00
.............................................TAAGTAGTATACATTAAGAGGTCG..................................................................................................................................	24	1	179.00	0.00	179.00	0.00	0.00
.............................................TAAGTAGTAACCATTAAAAGGTCG..................................................................................................................................	24	1	176.00	0.00	176.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTAG..................................................................................................................................	24	1	127.00	0.00	127.00	0.00	0.00
.............................................TAAGGAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	108.00	0.00	108.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTTG..................................................................................................................................	24	1	106.00	0.00	106.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGCCG..................................................................................................................................	24	1	100.00	0.00	100.00	0.00	0.00
.............................................TAAGTAGTATCCATTTAGAGGTCG..................................................................................................................................	24	1	99.00	0.00	99.00	0.00	0.00
.............................................TAAGTAGGATCCATTAAGAGGTCG..................................................................................................................................	24	1	98.00	0.00	98.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCGT.................................................................................................................................	25	1	96.00	0.00	96.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAG......................................................................................................................................	20	1	87.00	0.00	87.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCT..................................................................................................................................	24	1	79.00	0.00	79.00	0.00	0.00
.............................................TAAGTAGTATCTATTAAGAGGTCG..................................................................................................................................	24	1	72.00	0.00	72.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGTTCG..................................................................................................................................	24	1	64.00	0.00	64.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGT....................................................................................................................................	22	1	60.00	0.00	60.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCC..................................................................................................................................	24	1	59.00	0.00	59.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAAGTCG..................................................................................................................................	24	1	54.00	0.00	54.00	0.00	0.00
.............................................TAAGTAGTATCCATTGAGAGGTCG..................................................................................................................................	24	1	53.00	0.00	53.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGG.....................................................................................................................................	21	1	51.00	0.00	51.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGATGTCG..................................................................................................................................	24	1	49.00	0.00	49.00	0.00	0.00
.............................................TGAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	48.00	0.00	48.00	0.00	0.00
.............................................TAAGTAGCATCCATTAAGAGGTCG..................................................................................................................................	24	1	45.00	0.00	45.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAGAGGT....................................................................................................................................	23	1	44.00	0.00	44.00	0.00	0.00
.............................................TAAGTAGTATCCATTAACAGGTCG..................................................................................................................................	24	1	43.00	0.00	43.00	0.00	0.00
.............................................TAAGTAGTATCAATTAAGAGGTCG..................................................................................................................................	24	1	43.00	0.00	43.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGACGTCG..................................................................................................................................	24	1	43.00	0.00	43.00	0.00	0.00
.............................................TAAGTAGTATCCCTTAAGAGGTCG..................................................................................................................................	24	1	42.00	0.00	42.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGA.......................................................................................................................................	19	1	41.00	0.00	41.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGTGGTCG..................................................................................................................................	24	1	41.00	0.00	41.00	0.00	0.00
.............................................TAAGTAGTGTCCATTAAGAGGTCG..................................................................................................................................	24	1	39.00	1.00	38.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGGGGTCG..................................................................................................................................	24	1	39.00	0.00	39.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	25	1	39.00	0.00	39.00	0.00	0.00
.............................................TAAGAAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	38.00	0.00	38.00	0.00	0.00
.............................................TAAGTAGTATCCATTCAGCGGTCG..................................................................................................................................	24	1	37.00	0.00	37.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCA..................................................................................................................................	24	1	37.00	0.00	37.00	0.00	0.00
.............................................TAAGTAGTCTCCATTAAGCGGTCG..................................................................................................................................	24	1	36.00	0.00	36.00	0.00	0.00
.............................................TAAGTAGTATCCATCAAGAGGTCG..................................................................................................................................	24	1	36.00	0.00	36.00	0.00	0.00
.............................................TAAGTAGTATGCATTAAGAGGTCG..................................................................................................................................	24	1	36.00	0.00	36.00	0.00	0.00
.............................................TAAGTAGTATACATTAAGAGGGCG..................................................................................................................................	24	1	35.00	0.00	35.00	0.00	0.00
.............................................TAAGTGGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	35.00	0.00	35.00	0.00	0.00
.............................................TCAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	33.00	0.00	33.00	0.00	0.00
.............................................TAGGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	31.00	0.00	31.00	0.00	0.00
.............................................TAAGCAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	29.00	0.00	29.00	0.00	0.00
.............................................TAAGTAGTATCCATTAGGAGGTCG..................................................................................................................................	24	1	29.00	0.00	29.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGATCG..................................................................................................................................	24	1	29.00	0.00	29.00	0.00	0.00
.............................................TAAGTAGTATCCGTTAAGAGGTCG..................................................................................................................................	24	1	27.00	0.00	27.00	0.00	0.00
.............................................TAAGTAGTATTCATTAAGAGGTCG..................................................................................................................................	24	1	27.00	0.00	27.00	0.00	0.00
.............................................CAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	25.00	0.00	25.00	0.00	0.00
.............................................TAAGTAGTCTCCATTCAGAGGTCG..................................................................................................................................	24	1	25.00	0.00	25.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGACG..................................................................................................................................	24	1	24.00	0.00	24.00	0.00	0.00
...............................................AGTAGTATCCATTAAGAGGTCG..................................................................................................................................	22	1	23.00	0.00	23.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	23.00	0.00	23.00	0.00	0.00
.............................................TAAGTAATATCCATTAAGAGGTCG..................................................................................................................................	24	1	22.00	0.00	22.00	0.00	0.00
.............................................TAAGTAGTTTCCATTAAGAGGTCG..................................................................................................................................	24	1	20.00	0.00	20.00	0.00	0.00
.............................................TAAGTAGTATCCACTAAGAGGTCG..................................................................................................................................	24	1	20.00	0.00	20.00	0.00	0.00
.............................................TAAGTAGTATCCATTAATAGGTCG..................................................................................................................................	24	1	20.00	0.00	20.00	0.00	0.00
.............................................TAAGTAGGATACATTAAGAGGTCG..................................................................................................................................	24	1	20.00	0.00	20.00	0.00	0.00
.............................................GAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	20.00	0.00	20.00	0.00	0.00
.............................................TAAGTAGGATCCATTAAGAGGGCG..................................................................................................................................	24	1	19.00	0.00	19.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAAGGTCG..................................................................................................................................	24	1	19.00	0.00	19.00	0.00	0.00
.................................................TAGTATCCATTAAGAGGTCG..................................................................................................................................	20	1	19.00	0.00	19.00	0.00	0.00
.............................................TAAGTAGTATCCATTACGAGGTCG..................................................................................................................................	24	1	19.00	0.00	19.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTGG..................................................................................................................................	24	1	19.00	0.00	19.00	0.00	0.00
.............................................TAAGTACTATCCATTAAGAGGTCG..................................................................................................................................	24	1	19.00	0.00	19.00	0.00	0.00
.............................................TAAGTAGTATACATTTAGAGGTCG..................................................................................................................................	24	1	18.00	0.00	18.00	0.00	0.00
.............................................TAAGTAGTACCCATTAAGAGGTCG..................................................................................................................................	24	1	18.00	0.00	18.00	0.00	0.00
.............................................TAAGTAGTATCCTTTAAGAGGTCG..................................................................................................................................	24	1	17.00	0.00	17.00	0.00	0.00
.............................................TAAGTAGTATCGATTAAGAGGTCG..................................................................................................................................	24	1	16.00	0.00	16.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGCTCG..................................................................................................................................	24	1	16.00	0.00	16.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGCTG..................................................................................................................................	24	1	16.00	0.00	16.00	0.00	0.00
.............................................TAAGTAGTATCCATTTAGAGGGCG..................................................................................................................................	24	1	15.00	0.00	15.00	0.00	0.00
.............................................TAAGTAGTATCCAGTAAGAGGTCG..................................................................................................................................	24	1	15.00	0.00	15.00	0.00	0.00
.............................................AAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	14.00	0.00	14.00	0.00	0.00
.............................................TAAGTAGGATCCATTTAGAGGTCG..................................................................................................................................	24	1	13.00	0.00	13.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAGAGGTCC..................................................................................................................................	25	1	13.00	0.00	13.00	0.00	0.00
.............................................TAAGTAGTATCCATTAACAGGTCC..................................................................................................................................	24	1	13.00	0.00	13.00	0.00	0.00
.............................................TACGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	13.00	0.00	13.00	0.00	0.00
.............................................TAAGGAGTATCCATTAAGAGGGCG..................................................................................................................................	24	1	12.00	0.00	12.00	0.00	0.00
.............................................................................................ACCTTTTGATG--TACTACTT------------------------TAA..........................................................	22	1	12.00	0.00	12.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAGAGG.....................................................................................................................................	22	1	12.00	0.00	12.00	0.00	0.00
.............................................TAAATAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	12.00	0.00	12.00	0.00	0.00
..................................................AGTATCCATTAAGAGGTCG..................................................................................................................................	19	1	11.00	0.00	11.00	0.00	0.00
.............................................TAAGTAGTCTCCATTTAGAGGTCG..................................................................................................................................	24	1	11.00	0.00	11.00	0.00	0.00
............................................CTAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	25	1	11.00	0.00	11.00	0.00	0.00
.............................................TAAGTAGAATCCATTAAGAGGTCG..................................................................................................................................	24	1	10.00	0.00	10.00	0.00	0.00
.............................................TAAGTTGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	10.00	0.00	10.00	0.00	0.00
............................................TTAAGTAGTATCCATTAAGAGGTT...................................................................................................................................	24	1	10.00	0.00	10.00	0.00	0.00
................................................GTAGTATCCATTAAGAGGTCG..................................................................................................................................	21	1	10.00	0.00	10.00	0.00	0.00
..............................................AAGTAGTATCCATTAAGAGGT....................................................................................................................................	21	1	10.00	0.00	10.00	0.00	0.00
.............................................TAAGTAGTATCCATGAAGAGGTCG..................................................................................................................................	24	1	10.00	0.00	10.00	0.00	0.00
.............................................TGAGTAGTATCCATTAAGAGGGCG..................................................................................................................................	24	1	9.00	0.00	9.00	0.00	0.00
.............................................TAAGAAGGATCCATTAAGAGGTCG..................................................................................................................................	24	1	9.00	0.00	9.00	0.00	0.00
.............................................................................................ACCTTTTGATG--TACTACTT------------------------TAAA.........................................................	23	1	9.00	0.00	9.00	0.00	0.00

droPer1

TTGAATAGTGATTTAGTTCCACAATT------GCTGCAGCTTCCTTAAGTAGTATCCATTAAGAGGTCGTCATCT-A----GC-TA-AAATCGACCTTTTGATG--TACTACTT------------------------TAAAAAGC-ACAGTCGAAGTCAACA---------------GAACTGTG---------CGAT	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
.............................................TAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	4878.00	1.00	4586.00	0.00	167.00	124.00
............................................TTAAGTAGTATCCATTAAGAGGTC...................................................................................................................................	24	1	231.00	0.00	96.00	0.00	6.00	129.00
.............................................TAAGTAGTATCCATTAAAGGGTCG..................................................................................................................................	24	1	87.00	0.00	87.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGCGGTCG..................................................................................................................................	24	1	78.00	0.00	77.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTCAGAGGTCG..................................................................................................................................	24	1	55.00	0.00	55.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTC...................................................................................................................................	23	1	44.00	0.00	28.00	1.00	4.00	11.00
.............................................TAAGTAGTCTCCATTAAGAGGTCG..................................................................................................................................	24	1	25.00	0.00	25.00	0.00	0.00	0.00
.............................................TAAGTAGTATACATTAAGAGGTCG..................................................................................................................................	24	1	23.00	0.00	22.00	0.00	1.00	0.00
............................................TTAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	25	1	22.00	1.00	19.00	0.00	2.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGGCG..................................................................................................................................	24	1	20.00	0.00	20.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCGC.................................................................................................................................	25	1	17.00	0.00	4.00	0.00	1.00	12.00
............................................TTAAGTAGTATCCATTAAGAGGT....................................................................................................................................	23	1	16.00	0.00	8.00	0.00	2.00	6.00
.............................................TAAGTAGTATCCATTAAGAGGTCGT.................................................................................................................................	25	1	15.00	0.00	10.00	0.00	0.00	5.00
..............................................AAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	23	1	15.00	0.00	15.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAAGTCG..................................................................................................................................	24	1	13.00	0.00	13.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGCCG..................................................................................................................................	24	1	12.00	0.00	8.00	0.00	4.00	0.00
.............................................TAAGTAGTATCCATTGAGAGGTCG..................................................................................................................................	24	1	11.00	0.00	11.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGTTCG..................................................................................................................................	24	1	11.00	0.00	9.00	0.00	2.00	0.00
..............................................................................................CCTTTTGATG--TACTACTT------------------------TAAA.........................................................	22	1	11.00	0.00	1.00	0.00	0.00	10.00
.............................................TAAGTAGTATCCATTTAGAGGTCG..................................................................................................................................	24	1	10.00	0.00	9.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAGAGGTAG..................................................................................................................................	24	1	10.00	0.00	9.00	0.00	1.00	0.00
.............................................TAAGTAGCATCCATTAAGAGGTCG..................................................................................................................................	24	1	9.00	0.00	8.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTTG..................................................................................................................................	24	1	8.00	0.00	7.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAACAGGTCG..................................................................................................................................	24	1	8.00	0.00	7.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAGGGGTCG..................................................................................................................................	24	1	8.00	0.00	7.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAGTGGTCG..................................................................................................................................	24	1	8.00	0.00	8.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCT..................................................................................................................................	24	1	8.00	0.00	6.00	0.00	2.00	0.00
.............................................TAAGTAGTATCTATTAAGAGGTCG..................................................................................................................................	24	1	7.00	0.00	7.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCC..................................................................................................................................	24	1	7.00	0.00	6.00	0.00	1.00	0.00
.............................................TAAGTAGGATCCATTAAGAGGTCG..................................................................................................................................	24	1	7.00	0.00	5.00	0.00	1.00	1.00
.............................................TAAGTAGTATCCATTAAGAGG.....................................................................................................................................	21	1	7.00	0.00	5.00	0.00	0.00	2.00
.............................................TGAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	7.00	0.00	6.00	0.00	1.00	0.00
.............................................TAAGTGGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	6.00	0.00	6.00	0.00	0.00	0.00
.............................................TAAGCAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	6.00	0.00	5.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTCA..................................................................................................................................	24	1	6.00	0.00	6.00	0.00	0.00	0.00
.............................................................................................ACCTTTTGATG--TACTACTT------------------------TAA..........................................................	22	1	6.00	0.00	5.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTACGAGGTCG..................................................................................................................................	24	1	5.00	0.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGTATGCATTAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	4.00	0.00	0.00	1.00
.............................................TAAGGAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	3.00	0.00	1.00	1.00
.............................................TAAGTAGTATCCATTAAGATGTCG..................................................................................................................................	24	1	5.00	0.00	4.00	0.00	1.00	0.00
.............................................TAAGTAGTATACATTAAGAGGGCG..................................................................................................................................	24	1	5.00	0.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGTGTCCATTAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	5.00	0.00	0.00	0.00
.............................................CAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	4.00	0.00	1.00	0.00
.............................................TAAGTAGTACCCATTAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	4.00	0.00	1.00	0.00
.............................................TAAGTAGTATTCATTAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	5.00	0.00	0.00	0.00
..............................................................................................CCTTTTGATG--TACTACTT------------------------TAAAA........................................................	23	1	5.00	0.00	1.00	0.00	0.00	4.00
.............................................TAAGTAGTATCCATTAGGAGGTCG..................................................................................................................................	24	1	5.00	0.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCGTTAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	4.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATCAAGAGGTCG..................................................................................................................................	24	1	5.00	0.00	5.00	0.00	0.00	0.00
.............................................TAAGTAGGATCCATTAAGAGGGCG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGACG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAAGGTCG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
............................................CTAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	25	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTCAGCGGTCG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGCTCG..................................................................................................................................	24	1	4.00	0.00	2.00	0.00	2.00	0.00
.................................................TAGTATCCATTAAGAGGTCG..................................................................................................................................	20	1	4.00	0.00	3.00	0.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAGAG......................................................................................................................................	20	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAATAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGT....................................................................................................................................	22	1	4.00	0.00	2.00	0.00	0.00	2.00
.............................................TAAGTAGTATCCCTTAAGAGGTCG..................................................................................................................................	24	1	4.00	0.00	3.00	0.00	1.00	0.00
.............................................TAAGTAGTATACATTAAGAGGACG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAATATCCATTAAGAGGTCG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGAGGTGG..................................................................................................................................	24	1	4.00	0.00	4.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCAGTAAGAGGTCG..................................................................................................................................	24	1	4.00	0.00	3.00	0.00	1.00	0.00
............................................TTAAGTAGTATCCATTAAGAGGGC...................................................................................................................................	24	1	3.00	0.00	2.00	0.00	0.00	1.00
.............................................TAAGTAGTATCCATTAAGAGGCAG..................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCAATTAAGAGGTCG..................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTCTCCATTTAGAGGTCG..................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGTC...................................................................................................................................	23	1	3.00	0.00	3.00	0.00	0.00	0.00
.............................................GAAGTAGTATCCATTAAGAGGTCG..................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTATCCATTAAGACGTCG..................................................................................................................................	24	1	3.00	0.00	2.00	0.00	1.00	0.00
............................................TTAAGTAGTATCCATTCAGAGGTC...................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00	0.00
.............................................................................................ACCTTTTGATG--TACTACT......................................................................................	18	1	3.00	0.00	0.00	0.00	0.00	3.00
.............................................TAAGTAGTATCCACTAAGAGGTCG..................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00	0.00
.............................................TAAGTAGTCTCCATTCAGAGGTCG..................................................................................................................................	24	1	3.00	0.00	3.00	0.00	0.00	0.00

droWil1

TCGTGA----------------------------TGCAGATTCTTTAAGTAGTAACCTTTAAAGGGTCGTTTGTCCAATTCTTTTA-AAGTCGATCCTTTAAGT--TACTACTT------------------------GCAGAATGTGTTTCTGAAATCAACA---------------AAT--A-----------TAGA	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
.............................................TAAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	104642.00	0.00	104551.00	91.00	0.00
..............................................AAGTAGTAACCTTTAAAGGGTCGT.................................................................................................................................	24	1	510.00	0.00	510.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAATGGTCG..................................................................................................................................	24	1	457.00	0.00	457.00	0.00	0.00
..............................................AAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	23	1	353.00	0.00	353.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCGT.................................................................................................................................	25	1	353.00	0.00	352.00	1.00	0.00
.............................................................................................ATCCTTTAAGT--TACTACTT------------------------GCA..........................................................	22	1	322.00	0.00	322.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCT..................................................................................................................................	24	1	251.00	0.00	251.00	0.00	0.00
.............................................TAAGCAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	230.00	0.00	229.00	1.00	0.00
.............................................TAAGTAGTAACCTTTAAAGTGTCG..................................................................................................................................	24	1	229.00	0.00	229.00	0.00	0.00
.............................................TACGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	181.00	0.00	180.00	1.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGCCG..................................................................................................................................	24	1	179.00	0.00	179.00	0.00	0.00
.............................................TAAGTAGTAACATTTAAAGGGTCG..................................................................................................................................	24	1	165.00	0.00	165.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTC...................................................................................................................................	23	1	162.00	0.00	162.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTAG..................................................................................................................................	24	1	150.00	0.00	149.00	1.00	0.00
.............................................TAAGTAGCAACCTTTAAAGGGTCG..................................................................................................................................	24	1	136.00	0.00	136.00	0.00	0.00
.............................................TAAGTATTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	123.00	0.00	123.00	0.00	0.00
.............................................TCAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	120.00	0.00	120.00	0.00	0.00
.............................................TAAGTAGTAACCCTTAAAGGGTCG..................................................................................................................................	24	1	118.00	0.00	118.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAAGGTCG..................................................................................................................................	24	1	106.00	0.00	106.00	0.00	0.00
............................................CTAAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	25	1	106.00	0.00	106.00	0.00	0.00
............................................TTAAGTAGTAACCTTTAAAGGGTC...................................................................................................................................	24	1	103.00	0.00	103.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCA..................................................................................................................................	24	1	102.00	0.00	101.00	1.00	0.00
.............................................TAAGAAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	98.00	0.00	98.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAGGGGTCG..................................................................................................................................	24	1	97.00	0.00	97.00	0.00	0.00
...............................................AGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	22	1	96.00	0.00	96.00	0.00	0.00
.............................................TAATTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	88.00	0.00	88.00	0.00	0.00
.............................................TAAGTACTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	85.00	0.00	85.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGCTCG..................................................................................................................................	24	1	81.00	0.00	81.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCC..................................................................................................................................	24	1	79.00	0.00	79.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGTTCG..................................................................................................................................	24	1	72.00	0.00	72.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAGAGGGTCG..................................................................................................................................	24	1	71.00	0.00	71.00	0.00	0.00
.............................................TAAGTAGTAACCTTTGAAGGGTCG..................................................................................................................................	24	1	70.00	0.00	70.00	0.00	0.00
.............................................TAAGTAGTAACCTTCAAAGGGTCG..................................................................................................................................	24	1	69.00	0.00	69.00	0.00	0.00
.............................................TAAGTAGTCACCTTTAAAGGGTCG..................................................................................................................................	24	1	68.00	0.00	68.00	0.00	0.00
.............................................CAAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	68.00	0.00	67.00	1.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTTG..................................................................................................................................	24	1	67.00	0.00	67.00	0.00	0.00
.............................................TAAGTAGTAACCTCTAAAGGGTCG..................................................................................................................................	24	1	66.00	0.00	66.00	0.00	0.00
.............................................TAAGTGGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	64.00	0.00	64.00	0.00	0.00
.............................................TAGGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	62.00	0.00	62.00	0.00	0.00
.............................................TAAGTAGTAGCCTTTAAAGGGTCG..................................................................................................................................	24	1	60.00	0.00	60.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGAGTCG..................................................................................................................................	24	1	60.00	0.00	59.00	1.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCGA.................................................................................................................................	25	1	59.00	0.00	59.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGATCG..................................................................................................................................	24	1	59.00	0.00	59.00	0.00	0.00
.............................................TGAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	58.00	0.00	58.00	0.00	0.00
.............................................TAAGTAGTAACCTTTTAAGGGTCG..................................................................................................................................	24	1	57.00	0.00	57.00	0.00	0.00
.............................................TAAGTAGTGACCTTTAAAGGGTCG..................................................................................................................................	24	1	55.00	0.00	55.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAACGGGTCG..................................................................................................................................	24	1	53.00	0.00	52.00	1.00	0.00
.............................................TAAGTAGTAACCTTTACAGGGTCG..................................................................................................................................	24	1	53.00	0.00	53.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAACGGTCG..................................................................................................................................	24	1	53.00	0.00	53.00	0.00	0.00
.............................................TAAGTxxTAACCTTTAAAGGGTCG..................................................................................................................................	22	1	51.00	0.00	51.00	0.00	0.00
.............................................TAAGTAGTAACCTTTxAAGGGTCG..................................................................................................................................	23	1	50.00	0.00	50.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGGCG..................................................................................................................................	24	1	44.00	0.00	44.00	0.00	0.00
.............................................TAAGTAGTAACCTTTCAAGGGTCG..................................................................................................................................	24	1	43.00	0.00	43.00	0.00	0.00
.............................................TAAGGAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	42.00	0.00	42.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGCGTCG..................................................................................................................................	24	1	41.00	0.00	41.00	0.00	0.00
.............................................TAAGTAGTACCCTTTAAAGGGTCG..................................................................................................................................	24	1	41.00	0.00	41.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCGC.................................................................................................................................	25	1	41.00	0.00	41.00	0.00	0.00
.............................................TAAGTAATAACCTTTAAAGGGTCG..................................................................................................................................	24	1	37.00	0.00	37.00	0.00	0.00
.............................................TAACTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	35.00	0.00	35.00	0.00	0.00
.............................................TAAGTAGTAAACTTTAAAGGGTCG..................................................................................................................................	24	1	35.00	0.00	35.00	0.00	0.00
................................................TAAGTAACCTTTAAAGGGTCG..................................................................................................................................	21	1	35.00	0.00	35.00	0.00	0.00
.............................................TAAGTAGTAACTTTTAAAGGGTCG..................................................................................................................................	24	1	32.00	0.00	32.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAxGGTCG..................................................................................................................................	23	1	30.00	0.00	30.00	0.00	0.00
.............................................TAAGTAGTAACCxTTAAAGGGTCG..................................................................................................................................	23	1	27.00	0.00	27.00	0.00	0.00
.............................................TAAGTCGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	26.00	0.00	26.00	0.00	0.00
............................................................................................GATCCTTTAAGT--TACTACTT------------------------GC...........................................................	22	1	26.00	0.00	26.00	0.00	0.00
.............................................TAAGTAGTAATCTTTAAAGGGTCG..................................................................................................................................	24	1	25.00	0.00	25.00	0.00	0.00
..............................................AAGTAGTAACCTTTAAAGGGTCGTT................................................................................................................................	25	1	25.00	0.00	25.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGACG..................................................................................................................................	24	1	24.00	0.00	24.00	0.00	0.00
.............................................TAAGTAGAAACCTTTAAAGGGTCG..................................................................................................................................	24	1	22.00	0.00	22.00	0.00	0.00
..............................................AAGTAGTAACCTTTAAAGGGTCGC.................................................................................................................................	24	1	18.00	0.00	18.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGT....................................................................................................................................	22	1	17.00	0.00	17.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTGG..................................................................................................................................	24	1	17.00	0.00	17.00	0.00	0.00
.............................................AAAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	16.00	0.00	16.00	0.00	0.00
.............................................TAAATAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	15.00	0.00	15.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAATGGGTCG..................................................................................................................................	24	1	13.00	0.00	13.00	0.00	0.00
.............................................TAAGTAGTAACCTTAAAAGGGTCG..................................................................................................................................	24	1	13.00	0.00	13.00	0.00	0.00
.....................................................................TTTGTCCAATTCTTTTA-AAGTCG..........................................................................................................	23	1	12.00	0.00	12.00	0.00	0.00
.............................................TATGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	12.00	0.00	12.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCGTT................................................................................................................................	26	1	11.00	0.00	11.00	0.00	0.00
.............................................TAAGTTGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	10.00	0.00	10.00	0.00	0.00
............................................TTAAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	25	1	10.00	0.00	10.00	0.00	0.00
.............................................TAAGTAGTAACCTTxxAAGGGTCG..................................................................................................................................	22	1	10.00	0.00	10.00	0.00	0.00
.................................................TAGTAACCTTTAAAGGGTCG..................................................................................................................................	20	1	10.00	0.00	10.00	0.00	0.00
.............................................................................................ATCCTTTAAGT--TACTACTT------------------------GC...........................................................	21	1	10.00	0.00	10.00	0.00	0.00
.............................................TAAGTAGTxACCTTTAAAGGGTCG..................................................................................................................................	23	1	9.00	0.00	9.00	0.00	0.00
.............................................TAAGTAGTATCCTTTAAAGGGTCG..................................................................................................................................	24	1	9.00	0.00	9.00	0.00	0.00
.............................................TAAGTAGTTACCTTTAAAGGGTCG..................................................................................................................................	24	1	9.00	0.00	9.00	0.00	0.00
..............................................TAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	23	1	9.00	0.00	9.00	0.00	0.00
.............................................TTAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	9.00	0.00	8.00	1.00	0.00
.............................................TAAGTAGTATCCATTAAAGGGT....................................................................................................................................	22	1	8.00	0.00	1.00	7.00	0.00
.............................................TAAGTAGTAACCTTTATAGGGTCG..................................................................................................................................	24	1	8.00	0.00	8.00	0.00	0.00
.............................................................................................ATCCTTTAAGT--TACTACTT------------------------GT...........................................................	21	1	7.00	0.00	7.00	0.00	0.00
.............................................TAAGTAGTAACGTTTAAAGGGTCG..................................................................................................................................	24	1	7.00	0.00	7.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGG.....................................................................................................................................	21	1	6.00	0.00	6.00	0.00	0.00
.............................................GAAGTAGTAACCTTTAAAGGGTCG..................................................................................................................................	24	1	6.00	0.00	6.00	0.00	0.00
.............................................TAAGTAGTAACCTATAAAGGGTCG..................................................................................................................................	24	1	6.00	0.00	6.00	0.00	0.00
.............................................TAAGTAGTAACCTTTAAAGGGTCGTA................................................................................................................................	26	1	6.00	0.00	6.00	0.00	0.00
.............................................TAAGTAGTAAGCTTTAAAGGGTCG..................................................................................................................................	24	1	6.00	0.00	6.00	0.00	0.00
.............................................TAAGTAGGAACCTTTAAAGGGTCG..................................................................................................................................	24	1	6.00	0.00	6.00	0.00	0.00

droVir3

TTTAAGTA------TGTATCT------ATTATAT-------------TCAAGTATTCATTAATAATTAGTTTAATGC-----------------ACATTTTTAG--CTTTACTT------------------------TTAGACATTGCAATTTAAAATTATAAGTTATTTGTACACAG--CTA-----------TTCA

Size

Hit Count

Total Norm

V116
Male body

V053
Unknown

V047
Embryo

M027
Male body

M028
Head

droMoj3

TGTttTtt------GtttTTT------TTTttTt-------------TTtTGttTTTTtTTTTtgTtttTTTtTGGC------------------------------------------AGAGTTATCATATATAATTTAATGCGTTATTATTTGAGTAGATAAAT------CTGAGAG--TAA-----------TTGA	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
...................TT------TTTTTTT-------------TTTTTTTTTTTTTTTTTTTTTTTTTTT.............................................................................................................................	36	24	0.13	0.00	0.00	0.00	0.13
...............TTTTTT------TTTTTTT-------------TTTTTTTTTTTTTTTTTTTTTTT.................................................................................................................................	36	24	0.13	0.00	0.00	0.00	0.13
................TTTTT------TTTTTTT-------------TTTTTTTTTTTTTTTTTTTTTTTT................................................................................................................................	36	24	0.13	0.00	0.00	0.00	0.13
...TTTTT------TTTTTTT------TTTTTTT-------------TTTTTTTTTTTTTTTTT.......................................................................................................................................	36	24	0.13	0.00	0.00	0.00	0.13
..................TTT------TTTTTTT-------------TTTTTTTTTTTTTTTTTTTTTTTTTT..............................................................................................................................	36	24	0.13	0.00	0.00	0.00	0.13
..TTTTTT------TTTTTTT------TTTTTTT-------------TTTTTTTTTTTTTTTT........................................................................................................................................	36	24	0.13	0.00	0.00	0.00	0.13
.................TTTT------TTTTTTT-------------TTTTTTTTTTTTTTTTTTTTTTTTT...............................................................................................................................	36	24	0.13	0.00	0.00	0.00	0.13
.......T------TTTTTTT------TTTTTTC-------------TTTTG...................................................................................................................................................	20	12	0.08	0.00	0.00	0.08	0.00
................................TT-------------TTTTTTTTTTTTCTTTTG......................................................................................................................................	20	12	0.08	0.00	0.00	0.08	0.00
...........................TTTTTTT-------------TTTTTTTTTTTTTTT.........................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
..................TTT------TTTTGTT-------------TTTTGTTTGTT.............................................................................................................................................	21	12	0.08	0.08	0.00	0.00	0.00
..TTTTTT------TTTTTTT------TTTTTTT-------------TT......................................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
..............ATTTTTT------TTTTTTT-------------TTTT....................................................................................................................................................	18	108	0.01	0.00	0.00	0.00	0.01
..TTTTTT------GTTTTTT------TCTTTTG-------------T.......................................................................................................................................................	21	6	0.17	0.17	0.00	0.00	0.00
............................TTTTTT-------------TTTTTTTTTTTTTTTT........................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
...............TTTTTT------TTTTTTT-------------TTTTGTTG................................................................................................................................................	21	14	0.07	0.00	0.00	0.00	0.07
...............................TTT-------------TTTTTTTTTTTTTTGTTG......................................................................................................................................	21	14	0.07	0.00	0.00	0.00	0.07
....TTTC------GTTTTTT------TTTTTTT-------------TTTC....................................................................................................................................................	22	5	0.20	0.00	0.20	0.00	0.00
..................TTT------TTTTTTT-------------TTTTCTTTTG..............................................................................................................................................	20	12	0.08	0.00	0.00	0.08	0.00
....................T------TTTTTTT-------------TTTTTTTTTTTTTT..........................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
.....TTT------GGTTTTT------TTTTTTT-------------ATTT....................................................................................................................................................	21	8	0.13	0.00	0.00	0.00	0.13
..............................TTGT-------------TTTTGTTGTTTTTTTTT.......................................................................................................................................	21	12	0.08	0.08	0.00	0.00	0.00
...TTTTT------TTTTTTT------TTTTTTT-------------TTT.....................................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
.................TTTT------TTTTTTT-------------TTTTTTTTTTT.............................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
....TTTG------GTTTTTT------TTTTTTA-------------TTT.....................................................................................................................................................	21	8	0.13	0.00	0.00	0.00	0.13
......TT------TTTTTTT------TTTTTTT-------------TGTTG...................................................................................................................................................	21	14	0.07	0.00	0.00	0.00	0.07
.................ACTT------TTTTTTT-------------TTTTGTTTTTTTTTTTTGTTTTTTT...............................................................................................................................	36	1	1.00	0.00	0.00	0.00	1.00
.......................................................TTTTTTTTTGTTTTTTGTAG............................................................................................................................	20	2	0.50	0.00	0.00	0.00	0.50
...................TT------TTTTTTT-------------TTTTTTTTTTTTT...........................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
.......................................................TTTTTTTTTTTTTTCTTTTG............................................................................................................................	20	12	0.08	0.00	0.00	0.08	0.00
..................TTT------TTTTTTT-------------TTTTTTTTTTTT............................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
...........................TTGTTTT-------------TGTTGTTTTTTTTT..........................................................................................................................................	21	12	0.08	0.08	0.00	0.00	0.00
................TTTTT------TTTTTTT-------------TTTTTTTTTTTTTTTTTCTTT...................................................................................................................................	33	5	0.20	0.00	0.00	0.20	0.00
...............................................TTTTTTTTTTTTTTTTTGTTG...................................................................................................................................	21	14	0.07	0.00	0.00	0.00	0.07
...............TTTTTT------TTTTTTT-------------TTTTTTTTT...............................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
......................................................TTTTTTTTTTTTTTTTTGTTG............................................................................................................................	21	14	0.07	0.00	0.00	0.00	0.07
.............................TTTTT-------------TTTTTTTTTTTTTTTTT.......................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
....TTTT------GTTTTTT------TTTTTTT-------------TTTTTTTTTTTTTTTTTT......................................................................................................................................	36	2	0.50	0.00	0.00	0.00	0.50
.....................................................TTGTTTTTGTTGTTTTTTTTT.............................................................................................................................	21	12	0.08	0.08	0.00	0.00	0.00
....................................................TTTTTTTTTTTTTTTTTTTTTT.............................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
...............................................TTTGGTTTTTTTTTTTTATTT...................................................................................................................................	21	8	0.13	0.00	0.00	0.00	0.13
................TTTTT------TTTTTTT-------------TTTTTTTTTT..............................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
....TTTT------TTTTTTT------TTTTTTT-------------TTTT....................................................................................................................................................	22	51	0.02	0.02	0.00	0.00	0.00
................................TT-------------TTTTGTTTTTTTCTTTTGT.....................................................................................................................................	21	6	0.17	0.17	0.00	0.00	0.00

droGri2

TGCAA-----------------------------TGAATGTACTTTAAGTAGTA--CACTAAAAGGTCGGTATAA-T----TT-ACAAAAACAACCTTTTAATGGTTACTACTTAAGGCATAGACAT---------------------TATTCTTAATCAATA---------------TAAT-ATTTAATAATAACACA

Size

Hit Count

Total Norm

V109
Male body

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image