Possible Orthologs for dme-mir-958

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:21947666-21947787 -	96.75	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..............................AGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 8330.00 2335.00 59.00 584.00 5352.00 ........................................................................TGAGATTCTTCTATTCTACTTT............................ 22 1 1754.00 564.00 30.00 496.00 664.00 ..............................AGTAGAATAGCAGGCTTATCAC...................................................................... 22 1 600.00 510.00 5.00 18.00 67.00 ................................TAGAATAGCAGGCTTATCACA..................................................................... 21 1 197.00 172.00 0.00 2.00 23.00 ..............................AGTAGAATAGCAGGCTTATCACG..................................................................... 23 1 185.00 1.00 0.00 26.00 158.00 ..............................AGTAGAATAGCAGGCTTATCACC..................................................................... 23 1 124.00 31.00 1.00 2.00 90.00 ........................................................................TGAGATTCTTCTATTCTACTT............................. 21 1 118.00 39.00 5.00 52.00 22.00 ................................TAGAATAGCAGGCTTATCAC...................................................................... 20 1 73.00 70.00 0.00 1.00 2.00 ..............................AGTAGAATAGCAGGCTTATCA....................................................................... 21 1 37.00 9.00 1.00 19.00 8.00 .....................................................TGTTCAATTCAATCTGCTG.................................................. 19 1 32.00 17.00 0.00 3.00 12.00 ........................................................................TGAGATTCTTCTATTCTACT.............................. 20 1 32.00 7.00 2.00 17.00 6.00 ..............................AGGAGAATAGCAGGCTTATCACA..................................................................... 23 1 28.00 24.00 0.00 0.00 4.00 ...............................GTAGAATAGCAGGCTTATCACA..................................................................... 22 1 26.00 2.00 0.00 2.00 22.00 ..............................AGTAGAATATCAGGCTTATCACA..................................................................... 23 1 25.00 1.00 0.00 0.00 24.00 ..............................AGTAGAATAGCAGGCTTATCGCA..................................................................... 23 1 19.00 7.00 0.00 0.00 12.00 ..............................AGTAGAATAGCAGGCTTATC........................................................................ 20 1 14.00 8.00 3.00 2.00 1.00 ..............................AGTAGAATAGCAGGCTTATCCCA..................................................................... 23 1 14.00 12.00 0.00 0.00 2.00 ..............................AGTAGAATAGCGGGCTTATCACA..................................................................... 23 1 13.00 6.00 0.00 0.00 7.00 ..............................AGTAGAATAGCAGGATTATCACA..................................................................... 23 1 13.00 9.00 0.00 0.00 4.00 ................................TAGAATAGCAGGCTTATCACATG................................................................... 23 1 13.00 9.00 1.00 0.00 3.00 ..............................AGTAGAATACCAGGCTTATCACA..................................................................... 23 1 11.00 2.00 0.00 0.00 9.00 ..............................AGTAGAATAGCCGGCTTATCACA..................................................................... 23 1 11.00 11.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCATA..................................................................... 23 1 10.00 9.00 0.00 0.00 1.00 .............................AAGTAGAATAGCAGGCTTATCACA..................................................................... 24 1 10.00 1.00 0.00 0.00 9.00 ..............................AGTAGAATAGCAGGCTTCTCACA..................................................................... 23 1 9.00 9.00 0.00 0.00 0.00 ............................................................................ATTCTTCTATTCTACTTT............................ 18 1 9.00 0.00 0.00 4.00 5.00 ..............................AGTAGAATAGCAGGCTTATCACAA.................................................................... 24 1 9.00 1.00 0.00 0.00 8.00 ..............................AGTAGAATAGCAGGCTCATCACA..................................................................... 23 1 8.00 6.00 0.00 0.00 2.00 ........................................................................TGAGATTCTTCTATTCTACTTC............................ 22 1 8.00 0.00 1.00 2.00 5.00 ..............................AGTAGAGTAGCAGGCTTATCACA..................................................................... 23 1 8.00 3.00 0.00 0.00 5.00 ..........................................................................AGATTCTTCTATTCTACTTT............................ 20 1 8.00 0.00 0.00 0.00 8.00 ........................................................................TGAGTTTCTTCTATTCTACTTT............................ 22 1 8.00 6.00 0.00 0.00 2.00 ..............................AGTAGAATAGCAGGCTTATTACA..................................................................... 23 1 7.00 2.00 0.00 0.00 5.00 ..............................AATAGAATAGCAGGCTTATCACA..................................................................... 23 1 7.00 7.00 0.00 0.00 0.00 ..............................GGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 7.00 0.00 0.00 1.00 6.00 ..............................AGAAGAATAGCAGGCTTATCACA..................................................................... 23 1 7.00 6.00 0.00 0.00 1.00 ..............................AGTAGAATxxCAGGCTTATCACA..................................................................... 21 1 6.00 0.00 0.00 3.00 3.00 ..............................AGTAGAATAGCAGGCTTGTCACA..................................................................... 23 1 6.00 4.00 0.00 0.00 2.00 ..............................AGTAGAATAGCAGGCTTAACACA..................................................................... 23 1 6.00 2.00 0.00 0.00 4.00 ..............................AGTAGAATAGCATGCTTATCACA..................................................................... 23 1 6.00 3.00 0.00 0.00 3.00 ..............................AGTAGAATAGAAGGCTTATCACA..................................................................... 23 1 6.00 5.00 0.00 0.00 1.00 ..............................AGTAGAATAGCAGGCTTACCACA..................................................................... 23 1 6.00 3.00 0.00 1.00 2.00 ..............................AGTAGAATAGCAGGCTTATCCC...................................................................... 22 1 6.00 6.00 0.00 0.00 0.00 .........................................................................GAGATTCTTCTATTCTACTTT............................ 21 1 5.00 1.00 0.00 2.00 2.00 ..............................AGTAGAATAGCAGGCTTATCACT..................................................................... 23 1 5.00 5.00 0.00 0.00 0.00 .............................AAGTAGAATAGCAGGCTTATCAC...................................................................... 23 1 5.00 4.00 0.00 1.00 0.00 ........................................................................CGAGATTCTTCTATTCTACTTT............................ 22 1 5.00 2.00 0.00 1.00 2.00 ..............................AGTAGGATAGCAGGCTTATCACA..................................................................... 23 1 5.00 3.00 0.00 0.00 2.00 ........................................................................TGAGGTTCTTCTATTCTACTTT............................ 22 1 5.00 2.00 0.00 0.00 3.00 ..............................AGCAGAATAGCAGGCTTATCACA..................................................................... 23 1 5.00 2.00 1.00 0.00 2.00 ...........................................................................GATTCTTCTATTCTACTTT............................ 19 1 5.00 0.00 0.00 2.00 3.00 ..............................AGTAGAATAGCAGGCCTATCACA..................................................................... 23 1 5.00 4.00 0.00 0.00 1.00 ........................................................................TGATATTCTTCTATTCTACTTT............................ 22 1 4.00 0.00 0.00 1.00 3.00 ..............................AGTAGAATAGTAGGCTTATCACA..................................................................... 23 1 4.00 1.00 0.00 0.00 3.00 ..............................AGTAGAATAGCCGGCTTATCAC...................................................................... 22 1 4.00 4.00 0.00 0.00 0.00 ..............................AGTGGAATAGCAGGCTTATCACA..................................................................... 23 1 4.00 2.00 0.00 1.00 1.00 ........................................................................TGAGATTCTTCTCTTCTACTTT............................ 22 1 4.00 4.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTAT......................................................................... 19 1 4.00 2.00 0.00 0.00 2.00 ........................................................................TGAGAGTCTTCTATTCTACTTT............................ 22 1 4.00 4.00 0.00 0.00 0.00 ........................................................................TGAGATTCTTCTATTCTAC............................... 19 1 4.00 0.00 0.00 2.00 2.00 ........................................................................TGAGCTTCTTCTATTCTACTTT............................ 22 1 4.00 2.00 0.00 0.00 2.00 .............................CAGTAGAATAGCAGGCTTATCACA..................................................................... 24 1 4.00 3.00 0.00 0.00 1.00 ..............................ATTAGAATAGCAGGCTTATCACA..................................................................... 23 1 4.00 0.00 0.00 0.00 4.00 ..............................AGTAGAATGGCAGGCTTATCACA..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGACTTATCACA..................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 ................................................................ATCTGCTGTGAGATTCTTCTATT................................... 23 1 3.00 0.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGGCTGATCACA..................................................................... 23 1 3.00 2.00 0.00 0.00 1.00 ..............................AGTAGAATAGCAGGCTTATCCCC..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAxGCTTATCACA..................................................................... 22 1 3.00 0.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGGCGTATCACA..................................................................... 23 1 3.00 2.00 1.00 0.00 0.00 ..............................AGTAGCATAGCAGGCTTATCACA..................................................................... 23 1 3.00 2.00 0.00 0.00 1.00 .................................................................TCTGCTGTGAGATTCTTCTATTCTACTTT............................ 29 1 3.00 0.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGGCTTATCAAA..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..............................CGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 3.00 2.00 0.00 0.00 1.00 ..............................AGAAGAATAGCAGGCTTGTCACA..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ........................................................................TGAGATTCTTCTATTCTTCTTT............................ 22 1 3.00 3.00 0.00 0.00 0.00 ........................................................................TAAGATTCTTCTATTCTACTTT............................ 22 1 3.00 2.00 0.00 0.00 1.00 ........................................................................TGAGATTCTTCTATTCTACTTTT........................... 23 1 3.00 0.00 0.00 2.00 1.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_11:2578674-2578788 -	88.76	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCA------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..............................AGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 6679.00 1772.00 4692.00 215.00 ........................................................................TGAGATTCTTCTATTCTACTTT............................ 22 1 1916.00 362.00 1485.00 69.00 ..............................AGTAGAATAGCAGGCTTATCAC...................................................................... 22 1 919.00 340.00 482.00 97.00 ................................TAGAATAGCAGGCTTATCACA..................................................................... 21 1 591.00 155.00 426.00 10.00 ..............................AGTAGAATAGCAGGCTTATCA....................................................................... 21 1 267.00 196.00 59.00 12.00 ........................................................................TGAGATTCTTCTATTCTACTT............................. 21 1 174.00 78.00 76.00 20.00 ................................TAGAATAGCAGGCTTATCAC...................................................................... 20 1 135.00 16.00 118.00 1.00 ..............................AGTAGAATAGCAGGCTTATC........................................................................ 20 1 84.00 52.00 27.00 5.00 ........................................................................TGAGATTCTTCTATTCTACT.............................. 20 1 48.00 20.00 23.00 5.00 ........................................................................TGAGATTCTTCTATTCTAC............................... 19 1 29.00 1.00 25.00 3.00 .....................................................TGTTCAATTCAATCTGCTG.................................................. 19 1 27.00 0.00 27.00 0.00 ..............................AGTAGAATAGCAGGCTTACCACA..................................................................... 23 1 24.00 15.00 9.00 0.00 ..............................AGTAGAATAGCAGGCTTAT......................................................................... 19 1 23.00 7.00 16.00 0.00 ................................TAGAATAGCAGGCTTATCACATG................................................................... 23 1 20.00 3.00 17.00 0.00 ................................TAGAATAGCAGGCTTATCA....................................................................... 19 1 18.00 2.00 14.00 2.00 ..............................AGTAGAATAGCAGGCTTAACACA..................................................................... 23 1 16.00 14.00 2.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACG..................................................................... 23 1 15.00 5.00 9.00 1.00 ..............................AGCAGAATAGCAGGCTTATCACA..................................................................... 23 1 14.00 5.00 9.00 0.00 ........................................................................TGAGATTCTTCTATTTTACTTT............................ 22 1 12.00 0.00 12.00 0.00 ..............................AGTAGAATAGCGGGCTTATCACA..................................................................... 23 1 11.00 3.00 8.00 0.00 ..............................AGTAGAGTAGCAGGCTTATCACA..................................................................... 23 1 11.00 1.00 10.00 0.00 ..............................AGTAGAATAGCAGGTTTATCACA..................................................................... 23 1 11.00 1.00 10.00 0.00 ..............................AGTAGAATAGCAGGCCTATCACA..................................................................... 23 1 11.00 4.00 7.00 0.00 ..............................AGTAGAATACCAGGCTTATCACA..................................................................... 23 1 10.00 2.00 8.00 0.00 ..............................AGTAGAATAGCAGGCTTATCCCA..................................................................... 23 1 10.00 4.00 6.00 0.00 ..............................AGTAxAATAGCAGGCTTATCACA..................................................................... 22 1 10.00 0.00 9.00 1.00 ..............................AGTAGAATAGCAGGCTTATCGCA..................................................................... 23 1 10.00 2.00 8.00 0.00 ........................................................................TGAGATTCTTCTATTCTATTTT............................ 22 1 9.00 3.00 6.00 0.00 ..............................AGTTGAATAGCAGGCTTATCACA..................................................................... 23 1 9.00 0.00 9.00 0.00 ........................................................................TGAGATTCTTCTATTCTA................................ 18 1 8.00 0.00 8.00 0.00 ..............................AGTAGAATAGTAGGCTTATCACA..................................................................... 23 1 8.00 1.00 7.00 0.00 ........................................................................TGAGATTCTTTTATTCTACTTT............................ 22 1 8.00 0.00 8.00 0.00 .............................AAGTAGAATAGCAGGCTTATCACA..................................................................... 24 1 8.00 2.00 6.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACT..................................................................... 23 1 8.00 7.00 1.00 0.00 ..............................GGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 8.00 1.00 7.00 0.00 ..............................AGTAGGATAGCAGGCTTATCACA..................................................................... 23 1 8.00 2.00 6.00 0.00 ..............................AGTAGAATAGCAGGCTTATCAAA..................................................................... 23 1 8.00 1.00 7.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACAT.................................................................... 24 1 8.00 6.00 1.00 1.00 ........................................................................TGAGATTCTTCTATTCTACTTTT........................... 23 1 8.00 1.00 4.00 3.00 ..............................AGTAGAATAGCAGGCTTATTACA..................................................................... 23 1 7.00 1.00 6.00 0.00 ..............................AGTAGAATATCAGGCTTATCACA..................................................................... 23 1 7.00 4.00 3.00 0.00 ..............................ACTAGAATAGCAGGCTTATCACA..................................................................... 23 1 7.00 1.00 5.00 1.00 ..............................AATAGAATAGCAGGCTTATCACA..................................................................... 23 1 7.00 2.00 4.00 1.00 ..............................AGTAGAATAGCAGGATTATCACA..................................................................... 23 1 7.00 0.00 7.00 0.00 ..............................AGTAGAATAGCAGGCTTA.......................................................................... 18 1 7.00 1.00 5.00 1.00 ................................TAGAATAGCAGGCTTATCACAT.................................................................... 22 1 7.00 4.00 3.00 0.00 .............................CAGTAGAATAGCAGGCTTATCACA..................................................................... 24 1 7.00 0.00 7.00 0.00 ..............................ATTAGAATAGCAGGCTTATCACA..................................................................... 23 1 7.00 3.00 4.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACAA.................................................................... 24 1 7.00 2.00 5.00 0.00 ........................................................................TGAGATTCTTCTATTCTACTTTGGTC........................ 26 1 6.00 0.00 6.00 0.00 ..............................AGTAGAATGGCAGGCTTATCACA..................................................................... 23 1 6.00 2.00 4.00 0.00 ..............................AGTAGAATAGCAGGCTCATCACA..................................................................... 23 1 6.00 0.00 6.00 0.00 ........................................................................TGAGATTCTTCTATTCTAATTT............................ 22 1 6.00 6.00 0.00 0.00 ........................................................................TGAGATTCTTCTATTCTTCTTT............................ 22 1 6.00 0.00 6.00 0.00 ................................TAGAATAGCAGGCTTATC........................................................................ 18 1 6.00 0.00 5.00 1.00 ..............................AGTATAATAGCAGGCTTATCACA..................................................................... 23 1 5.00 0.00 4.00 1.00 ..............................AGTAGAATAGCAAGCTTATCACA..................................................................... 23 1 5.00 3.00 2.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACC..................................................................... 23 1 5.00 1.00 4.00 0.00 ..............................AGTGGAATAGCAGGCTTATCACA..................................................................... 23 1 5.00 1.00 4.00 0.00 ...............................GTAGAATAGCAGGCTTATCACA..................................................................... 22 1 5.00 0.00 5.00 0.00 .................................AGAATAGCAGGCTTATCACA..................................................................... 20 1 5.00 1.00 4.00 0.00 ......................................................................TGTGAGATTCTTCTATTCTACT.............................. 22 1 5.00 1.00 4.00 0.00 ..............................CGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 5.00 0.00 5.00 0.00 ........................................................................TGAGATTCCTCTATTCTACTTT............................ 22 1 5.00 1.00 4.00 0.00 ..............................AGTAGAATAGCATGCTTATCACA..................................................................... 23 1 5.00 1.00 3.00 1.00 ..............................AGTAGAATAGCAGTCTTATCACA..................................................................... 23 1 5.00 1.00 4.00 0.00 ..............................AGTAGAATAGCAGCCTTATCACA..................................................................... 23 1 5.00 1.00 4.00 0.00 ..............................AGTAGAACAGCAGGCTTATCACA..................................................................... 23 1 5.00 1.00 3.00 1.00 ..............................AGTAGAATAGCAGGCTTATT........................................................................ 20 1 4.00 4.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCATA..................................................................... 23 1 4.00 0.00 4.00 0.00 ........................................................................TGAGATTCTCCTATTCTACTTT............................ 22 1 4.00 0.00 4.00 0.00 ..............................TGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 4.00 0.00 4.00 0.00 ..............................AGTAGAATAACAGGCTTATCACA..................................................................... 23 1 4.00 0.00 4.00 0.00 .............................AAGTAGAATAGCAGGCTTATCAC...................................................................... 23 1 4.00 0.00 4.00 0.00 ................................TAGAATAGCAGGCTTATCTCA..................................................................... 21 1 4.00 3.00 1.00 0.00 ..............................AGTAGAATAGCAGGCATATCACA..................................................................... 23 1 4.00 0.00 4.00 0.00 ........................................................................TGAGCTTCTTCTATTCTACTTT............................ 22 1 4.00 2.00 2.00 0.00 ..............................AGTAGAATAGCAGGCTTAGCACA..................................................................... 23 1 4.00 4.00 0.00 0.00 ..............................AGTAGAATAGAAGGCTTATCACA..................................................................... 23 1 4.00 1.00 3.00 0.00 ..............................AGTAAAATAGCAGGCTTATCACA..................................................................... 23 1 4.00 1.00 3.00 0.00 ................................TAGAATAGCAGGCTTATCGCA..................................................................... 21 1 4.00 3.00 1.00 0.00 ..............................AGTAGTATAGCAGGCTTATCACA..................................................................... 23 1 4.00 1.00 3.00 0.00 ..............................AGTCGAATAGCAGGCTTATCACA..................................................................... 23 1 4.00 1.00 3.00 0.00 ........................................................................TGATATTCTTCTATTCTACTTT............................ 22 1 3.00 2.00 1.00 0.00 .........................................................................GAGATTCTTCTATTCTACTTT............................ 21 1 3.00 2.00 1.00 0.00 ..............................AGTAGAATxxCAGGCTTATCACA..................................................................... 21 1 3.00 0.00 3.00 0.00 ........................................................................TGAGATTCTTCCATTCTACTTT............................ 22 1 3.00 1.00 2.00 0.00 ........................................................................TGAGATTCTTCTGTTCTACTTT............................ 22 1 3.00 0.00 3.00 0.00 ..............................AGTAGAATAGCAxGCTTATCACA..................................................................... 22 1 3.00 2.00 1.00 0.00 ..............................AGTAGAATAGCAGGCTTATCT....................................................................... 21 1 3.00 3.00 0.00 0.00 ..............................AGTAGAATAGCAGGTTTATCAC...................................................................... 22 1 3.00 0.00 3.00 0.00 ........................................................................TGAGATTCTTCTATTCCACTTT............................ 22 1 3.00 1.00 2.00 0.00 ..............................AGTAGAATAGCAGGCTTCACA....................................................................... 21 1 3.00 0.00 3.00 0.00 ..............................AGTACAATAGCAGGCTTATCACA..................................................................... 23 1 3.00 1.00 2.00 0.00 ..............................AGTAGAATAGCAGGCTTGTCACA..................................................................... 23 1 3.00 1.00 2.00 0.00 ........................................................................TGAGATTCTTCTAATCTACTTT............................ 22 1 3.00 0.00 3.00 0.00 ..............................AGTGGAATAGCAGGCTTATCAC...................................................................... 22 1 3.00 0.00 2.00 1.00 ................................TAGAATAGTAGGCTTATCACA..................................................................... 21 1 3.00 0.00 3.00 0.00 ........................................................................TGGGATTCTTCTATTCTACTTT............................ 22 1 3.00 0.00 3.00 0.00 ..............................AGTAGAATAGCAGGCTTATAACA..................................................................... 23 1 3.00 1.00 1.00 1.00

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:23123705-23123824 -	95.9	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCAAACCC-- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..............................AGTAGAATAGCAGGCTTATCACA..................................................................... 23 2 1117.00 807.00 8.00 238.00 17.00 47.00 ........................................................................TGAGATTCTTCTATTCTACTTT............................ 22 2 460.00 379.50 7.00 53.50 11.00 9.00 ..............................AGTAGAATAGCAGGCTTATCAC...................................................................... 22 2 204.00 156.50 1.00 40.00 5.00 1.50 ................................TAGAATAGCAGGCTTATCACA..................................................................... 21 2 117.50 74.00 0.00 42.50 0.50 0.50 ..............................AGTAGAATAGCAGGCTTATCA....................................................................... 21 2 47.00 9.50 2.00 35.00 0.50 0.00 ................................TAGAATAGCAGGCTTATCAC...................................................................... 20 2 30.00 29.00 0.00 1.00 0.00 0.00 ........................................................................TGAGATTCTTCTATTCTACTT............................. 21 2 27.00 12.50 1.50 10.50 1.00 1.50 .....................................................TGTTTAACTCAATCTGCTG.................................................. 19 2 17.50 17.00 0.00 0.00 0.00 0.50 ..............................AGTAGAATAGCAGGCTTATC........................................................................ 20 2 13.50 5.50 0.50 6.50 1.00 0.00 ........................................................................TGAGATTCTTCTATTCTACT.............................. 20 2 11.00 3.00 0.00 6.50 0.50 1.00 ................................TAGAATAGCAGGCTTATCACATG................................................................... 23 2 8.00 5.00 0.00 1.50 0.00 1.50 ..............................AGTAGAATAGCAGGCTTATCACC..................................................................... 23 2 6.00 6.00 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTAT......................................................................... 19 2 5.00 0.00 0.00 5.00 0.00 0.00 .............................AAGTAGAATAGCAGGCTTATCAC...................................................................... 23 2 5.00 3.50 0.00 1.50 0.00 0.00 ..............................AGGAGAATAGCAGGCTTATCACA..................................................................... 23 2 4.50 4.00 0.00 0.00 0.50 0.00 ..............................AGTAGAATAGCAGGCTTCTCACA..................................................................... 23 2 4.50 4.50 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCCGGCTTATCACA..................................................................... 23 2 3.50 3.50 0.00 0.00 0.00 0.00 .............................AAGTAGAATAGCAGGCTTATCACA..................................................................... 24 2 3.50 2.50 0.00 1.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCCCA..................................................................... 23 2 3.50 2.00 0.00 0.50 0.50 0.50 ..............................AGCAGAATAGCAGGCTTATCACA..................................................................... 23 2 3.50 1.00 0.00 2.00 0.50 0.00 ........................................................................TGAGATTCTTCTATTCTACTTTT........................... 23 2 3.50 3.00 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGCGGGCTTATCACA..................................................................... 23 2 3.00 2.00 0.00 1.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCGCA..................................................................... 23 2 3.00 2.50 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGAAGGCTTATCACA..................................................................... 23 2 3.00 1.50 0.00 1.50 0.00 0.00 ................................TAGAATAGCAGGCTTATCACAT.................................................................... 22 2 3.00 0.50 0.00 2.50 0.00 0.00 ..............................AGTAGAATAGCCGGCTTATCAC...................................................................... 22 2 2.00 2.00 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACT..................................................................... 23 2 2.00 0.50 0.00 1.50 0.00 0.00 .................................AGAATAGCAGGCTTATCACA..................................................................... 20 2 2.00 0.50 0.00 1.00 0.00 0.50 ........................................................................TGAGATTCTTCTATTCTAC............................... 19 2 2.00 1.50 0.00 0.00 0.50 0.00 ..............................AGTAGAATAGCTGGCTTATCACA..................................................................... 23 2 2.00 2.00 0.00 0.00 0.00 0.00 ..............................AGTAGGATAGCAGGCTTATCACA..................................................................... 23 2 2.00 1.50 0.00 0.00 0.50 0.00 ..............................AGTAGAATAGCAGGCTTATCACG..................................................................... 23 2 2.00 0.50 0.00 0.00 0.50 1.00 ................................TAGAATAGCAGGCTTATCACATGT.................................................................. 24 2 2.00 1.00 0.00 1.00 0.00 0.00 ..............................AGTAGAATGGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AATAGAATAGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ........................................................................TGAGATTCTTCTATTCTCCTTT............................ 22 2 1.50 1.50 0.00 0.00 0.00 0.00 .......................................................................CTGAGATTCTTCTATTCTACTTT............................ 23 2 1.50 1.00 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGCAGGCATATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGTAGAATTGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGAAGAATAGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGGAGAATAGCAGGCTTAGCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ................................TAGAATAGCAGGCTTATCA....................................................................... 19 2 1.50 1.00 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGCAGGCTTACCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACAA.................................................................... 24 2 1.50 0.50 0.00 1.00 0.00 0.00
2	chr3L:23128644-23128763 -	95.08	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCGAACCC-- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..............................AGTAGAATAGCAGGCTTATCACA..................................................................... 23 2 1117.00 807.00 8.00 238.00 17.00 47.00 ........................................................................TGAGATTCTTCTATTCTACTTT............................ 22 2 460.00 379.50 7.00 53.50 11.00 9.00 ..............................AGTAGAATAGCAGGCTTATCAC...................................................................... 22 2 204.00 156.50 1.00 40.00 5.00 1.50 ................................TAGAATAGCAGGCTTATCACA..................................................................... 21 2 117.50 74.00 0.00 42.50 0.50 0.50 ..............................AGTAGAATAGCAGGCTTATCA....................................................................... 21 2 47.00 9.50 2.00 35.00 0.50 0.00 ................................TAGAATAGCAGGCTTATCAC...................................................................... 20 2 30.00 29.00 0.00 1.00 0.00 0.00 ........................................................................TGAGATTCTTCTATTCTACTT............................. 21 2 27.00 12.50 1.50 10.50 1.00 1.50 .....................................................TGTTTAACTCAATCTGCTG.................................................. 19 2 17.50 17.00 0.00 0.00 0.00 0.50 ..............................AGTAGAATAGCAGGCTTATC........................................................................ 20 2 13.50 5.50 0.50 6.50 1.00 0.00 ........................................................................TGAGATTCTTCTATTCTACT.............................. 20 2 11.00 3.00 0.00 6.50 0.50 1.00 ................................TAGAATAGCAGGCTTATCACATG................................................................... 23 2 8.00 5.00 0.00 1.50 0.00 1.50 ..............................AGTAGAATAGCAGGCTTATCACC..................................................................... 23 2 6.00 6.00 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTAT......................................................................... 19 2 5.00 0.00 0.00 5.00 0.00 0.00 .............................AAGTAGAATAGCAGGCTTATCAC...................................................................... 23 2 5.00 3.50 0.00 1.50 0.00 0.00 ..............................AGGAGAATAGCAGGCTTATCACA..................................................................... 23 2 4.50 4.00 0.00 0.00 0.50 0.00 ..............................AGTAGAATAGCAGGCTTCTCACA..................................................................... 23 2 4.50 4.50 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCCGGCTTATCACA..................................................................... 23 2 3.50 3.50 0.00 0.00 0.00 0.00 .............................AAGTAGAATAGCAGGCTTATCACA..................................................................... 24 2 3.50 2.50 0.00 1.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCCCA..................................................................... 23 2 3.50 2.00 0.00 0.50 0.50 0.50 ..............................AGCAGAATAGCAGGCTTATCACA..................................................................... 23 2 3.50 1.00 0.00 2.00 0.50 0.00 ........................................................................TGAGATTCTTCTATTCTACTTTT........................... 23 2 3.50 3.00 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGCGGGCTTATCACA..................................................................... 23 2 3.00 2.00 0.00 1.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCGCA..................................................................... 23 2 3.00 2.50 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGAAGGCTTATCACA..................................................................... 23 2 3.00 1.50 0.00 1.50 0.00 0.00 ................................TAGAATAGCAGGCTTATCACAT.................................................................... 22 2 3.00 0.50 0.00 2.50 0.00 0.00 ..............................AGTAGAATAGCCGGCTTATCAC...................................................................... 22 2 2.00 2.00 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACT..................................................................... 23 2 2.00 0.50 0.00 1.50 0.00 0.00 .................................AGAATAGCAGGCTTATCACA..................................................................... 20 2 2.00 0.50 0.00 1.00 0.00 0.50 ........................................................................TGAGATTCTTCTATTCTAC............................... 19 2 2.00 1.50 0.00 0.00 0.50 0.00 ..............................AGTAGAATAGCTGGCTTATCACA..................................................................... 23 2 2.00 2.00 0.00 0.00 0.00 0.00 ..............................AGTAGGATAGCAGGCTTATCACA..................................................................... 23 2 2.00 1.50 0.00 0.00 0.50 0.00 ..............................AGTAGAATAGCAGGCTTATCACG..................................................................... 23 2 2.00 0.50 0.00 0.00 0.50 1.00 ................................TAGAATAGCAGGCTTATCACATGT.................................................................. 24 2 2.00 1.00 0.00 1.00 0.00 0.00 ..............................AGTAGAATGGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AATAGAATAGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ........................................................................TGAGATTCTTCTATTCTCCTTT............................ 22 2 1.50 1.50 0.00 0.00 0.00 0.00 .......................................................................CTGAGATTCTTCTATTCTACTTT............................ 23 2 1.50 1.00 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGCAGGCATATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGTAGAATTGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGAAGAATAGCAGGCTTATCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGGAGAATAGCAGGCTTAGCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ................................TAGAATAGCAGGCTTATCA....................................................................... 19 2 1.50 1.00 0.00 0.50 0.00 0.00 ..............................AGTAGAATAGCAGGCTTACCACA..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCACAA.................................................................... 24 2 1.50 0.50 0.00 1.00 0.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4784:22312266-22312387 -	91.91	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTGTCTACGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTTACATCAAACCCGA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................AGTAGAATAGCAGGCTTATCACA..................................................................... 23 1 2292.00 998.00 13.00 0.00 1281.00 ........................................................................TGAGATTCTTCTATTCTACTTT............................ 22 1 668.00 334.00 67.00 0.00 267.00 ..............................AGTAGAATAGCAGGCTTATCAC...................................................................... 22 1 640.00 248.00 6.00 0.00 386.00 ................................TAGAATAGCAGGCTTATCACA..................................................................... 21 1 96.00 60.00 1.00 0.00 35.00 ..............................AGTAGAATAGCAGGCTTATCA....................................................................... 21 1 86.00 9.00 5.00 0.00 72.00 ........................................................................TGAGATTCTTCTATTCTACTT............................. 21 1 79.00 29.00 6.00 0.00 44.00 ..............................AGTAGAATAGCAGGCTTATC........................................................................ 20 1 78.00 17.00 3.00 0.00 58.00 ........................................................................TGAGATTCTTCTATTCTACT.............................. 20 1 42.00 9.00 2.00 0.00 31.00 .....................................................TGTTCCATTCAATCTGCTG.................................................. 19 1 34.00 31.00 0.00 0.00 3.00 ................................TAGAATAGCAGGCTTATCAC...................................................................... 20 1 30.00 24.00 0.00 0.00 6.00 ..............................AGTAGAATAGCAGGCTTATCACC..................................................................... 23 1 28.00 7.00 1.00 0.00 20.00 ..............................AGTAGAATAGCATGCTTATCACA..................................................................... 23 1 19.00 8.00 0.00 0.00 11.00 ..............................AGTAGAATATCAGGCTTATCACA..................................................................... 23 1 16.00 8.00 0.00 0.00 8.00 ..............................AGTAGAATAGCAGGCTTATCACT..................................................................... 23 1 16.00 0.00 0.00 0.00 16.00 ..............................AGTAGAATAGCAGTCTTATCACA..................................................................... 23 1 16.00 7.00 0.00 0.00 9.00 ........................................................................TGAGATTCTTCTATTCTAC............................... 19 1 15.00 13.00 0.00 0.00 2.00 ..............................ATTAGAATAGCAGGCTTATCACA..................................................................... 23 1 14.00 5.00 0.00 0.00 9.00 ..............................AGTAGAATAGCAGGCTTAT......................................................................... 19 1 13.00 3.00 0.00 0.00 10.00 ..............................AGTAGAATAGCAGGCTTATCCCA..................................................................... 23 1 13.00 11.00 0.00 0.00 2.00 ..............................AGGAGAATAGCAGGCTTATCACA..................................................................... 23 1 12.00 11.00 0.00 0.00 1.00 ..............................AGTATAATAGCAGGCTTATCACA..................................................................... 23 1 10.00 4.00 0.00 0.00 6.00 ..............................AGTAGAATAGCAGGATTATCACA..................................................................... 23 1 9.00 3.00 1.00 0.00 5.00 ..............................AGTAGAATAGCCGGCTTATCACA..................................................................... 23 1 8.00 4.00 1.00 0.00 3.00 ..............................AGTAGAATAGAAGGCTTATCACA..................................................................... 23 1 8.00 0.00 0.00 0.00 8.00 ........................................................................TGAGATTATTCTATTCTACTTT............................ 22 1 7.00 0.00 0.00 0.00 7.00 ..............................AGTAGAATAGCAGGCTTATCACG..................................................................... 23 1 7.00 1.00 0.00 0.00 6.00 ..............................AGCAGAATAGCAGGCTTATCACA..................................................................... 23 1 7.00 2.00 0.00 0.00 5.00 ..............................AGTAGAATAACAGGCTTATCACA..................................................................... 23 1 6.00 5.00 0.00 0.00 1.00 ................................TAGAATAGCAGGCTTATCACATG................................................................... 23 1 6.00 2.00 0.00 0.00 4.00 ..............................AGAAGAATAGCAGGCTTATCACA..................................................................... 23 1 6.00 2.00 0.00 0.00 4.00 ........................................................................TGAGATTCTTCTATTCTA................................ 18 1 5.00 0.00 0.00 0.00 5.00 ..............................AGTAGAATAGCAAGCTTATCACA..................................................................... 23 1 5.00 4.00 0.00 0.00 1.00 ..............................AGTAGAATAGCAGGCTTGTCACA..................................................................... 23 1 5.00 3.00 0.00 0.00 2.00 ........................................................................TTAGATTCTTCTATTCTACTTT............................ 22 1 5.00 0.00 0.00 0.00 5.00 ..............................AGTAGAATAGCAGGCTTATAACA..................................................................... 23 1 5.00 1.00 0.00 0.00 4.00 ..............................AGTAGAATAGCAGGCCTATCACA..................................................................... 23 1 5.00 5.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTCTCACA..................................................................... 23 1 4.00 4.00 0.00 0.00 0.00 ........................................................................TGATATTCTTCTATTCTACTTT............................ 22 1 4.00 3.00 0.00 0.00 1.00 ..............................AGTAGAATAGCAGTCTTATCAC...................................................................... 22 1 4.00 2.00 0.00 0.00 2.00 ..............................AATAGAATAGCAGGCTTATCACA..................................................................... 23 1 4.00 2.00 1.00 0.00 1.00 ...................................AATAGCAGGCTTATCACA..................................................................... 18 1 4.00 0.00 0.00 0.00 4.00 ........................................................................TGAGATTCTTATATTCTACTTT............................ 22 1 4.00 4.00 0.00 0.00 0.00 ..............................AGTATAATAGCAGGCTTATCAC...................................................................... 22 1 4.00 1.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGGCTTATCAAA..................................................................... 23 1 4.00 0.00 0.00 0.00 4.00 ........................................................................TGAGATTCTTCTATTCTACTTTT........................... 23 1 4.00 1.00 0.00 0.00 3.00 ..............................AGTCGAATAGCAGGCTTATCACA..................................................................... 23 1 4.00 1.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGGCTTATTACA..................................................................... 23 1 3.00 2.00 0.00 0.00 1.00 ..............................AGTAGAATAGCAGGCTTATCATA..................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 ..............................AGTAGAATAGCAGGGTTATCACA..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGCCTTATCAC...................................................................... 22 1 3.00 3.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCGTATCACA..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTCATCACA..................................................................... 23 1 3.00 0.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGGCATATCACA..................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ........................................................................TGAGCTTCTTCTATTCTACTTT............................ 22 1 3.00 2.00 0.00 0.00 1.00 ..............................AGTGGAATAGCAGGCTTATCAC...................................................................... 22 1 3.00 2.00 0.00 0.00 1.00 ..............................GGTAGAATAGCAGGCTTATCAC...................................................................... 22 1 3.00 1.00 0.00 0.00 2.00 ..............................AGTAGAATAGCAGGCTTATCGCA..................................................................... 23 1 3.00 2.00 0.00 0.00 1.00 ..............................AGTAGAATAGCAGCCTTATCACA..................................................................... 23 1 3.00 1.00 0.00 0.00 2.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453830:377334-377447 +	82.54	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGACTTTC-TCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCTGTTCAATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTAAACATCA------- Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409801:238269-238390 -	89.49	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTTTCCGCGATCGGCGGGTCTTTAGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCAATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGCAAACATCACCTCAGA Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302377:590001-590115 +	84.05	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCGATCCGCTGTGAGATTCTTCTATTCTACTTTCTACGACACCCGTAAACATCA------- Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415263:76348-76466 -	91.85	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGATTTTCCACGATCGGCGGGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTATTCAATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCAG---CCA Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000491199:65271-65387 +	86.31	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GTATTTTCCTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCGTTCAATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAGACCCGTGTACATCACA----- Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000773586:33589-33710 +	91.1	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACACCCGA GGACTTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCAACCCGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCACATAAGA Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000299918:44958-45080 -	88.91	GGAT-TTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACA-ACACCCGTTAACATCACACCCGA GGATATTTCCGCGAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGCTAACATCAC-CCAGG Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13337:22380395-22380515 -	77.58	GGATTTTCC-ACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGAC-AACACCCGTTAACATCACACCCGA GAATATTCCAACGACCGGTGGGTTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTC-CTTTAACCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGTAAACACCGATCTC-- Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ...............................AGTAGAATAGCAGGCTTATCACA...................................................................... 23 1 1161.00 639.00 298.00 95.00 129.00 .........................................................................TGAGATTCTTCTATTCTACTTT............................. 22 1 514.00 261.00 27.00 64.00 162.00 ...............................AGTAGAATAGCAGGCTTATCAC....................................................................... 22 1 371.00 107.00 193.00 19.00 52.00 ...............................AGTAGAATAGCAGGCTTATCA........................................................................ 21 1 193.00 165.00 12.00 14.00 2.00 .........................................................................TGAGATTCTTCTATTCTACTT.............................. 21 1 65.00 39.00 11.00 4.00 11.00 .........................................................................TGAGATTCTTCTATTCTACT............................... 20 1 43.00 15.00 21.00 7.00 0.00 ...............................AGTAGAATAGCAGGCTTATC......................................................................... 20 1 42.00 19.00 14.00 6.00 3.00 .................................TAGAATAGCAGGCTTATCACA...................................................................... 21 1 20.00 12.00 4.00 0.00 4.00 ...............................AGTAGAATAGCAGGCTTAT.......................................................................... 19 1 20.00 20.00 0.00 0.00 0.00 ...............................AGTAGAATAGCAGGCTTATCACT...................................................................... 23 1 12.00 6.00 4.00 2.00 0.00 ...............................AGGAGAATAGCAGGCTTATCACA...................................................................... 23 1 12.00 0.00 6.00 3.00 3.00 ...............................AGTAGAATATCAGGCTTATCACA...................................................................... 23 1 8.00 7.00 1.00 0.00 0.00 ................................GTAGAATAGCAGGCTTATCAC....................................................................... 21 1 8.00 3.00 5.00 0.00 0.00 .........................................................................TGAGATTCTTCTATTCTACTTTT............................ 23 1 8.00 5.00 0.00 0.00 3.00 ...............................AGTAGAATAGCAGGCTTATCTC....................................................................... 22 1 7.00 5.00 1.00 1.00 0.00 ................................GTAGAATAGCAGGCTTATCACA...................................................................... 22 1 6.00 3.00 2.00 1.00 0.00 ...............................AGTAGAATAGCCGGCTTATCACA...................................................................... 23 1 6.00 3.00 0.00 2.00 1.00 ...............................AGTAGAATAGCATGCTTATCACA...................................................................... 23 1 6.00 4.00 1.00 0.00 1.00 ...............................AGTAGAATAGCAGTCTTATCACA...................................................................... 23 1 6.00 4.00 1.00 0.00 1.00 .........................................................................TGAGATTCTTCTATTCTAC................................ 19 1 5.00 1.00 0.00 2.00 2.00 ...............................AGTAGAATAGCAGGATTATCACA...................................................................... 23 1 5.00 3.00 2.00 0.00 0.00 ...............................AGTAGAATAGCAGGCTTATCGCA...................................................................... 23 1 5.00 4.00 1.00 0.00 0.00 .........................................................................TGAGATTCTTCTATTATACTTT............................. 22 1 4.00 1.00 0.00 3.00 0.00 ...............................AGTAGAATAGCAGGCTTA........................................................................... 18 1 4.00 0.00 1.00 3.00 0.00 ..................................AGAATAGCAGGCTTATCACA...................................................................... 20 1 4.00 1.00 2.00 0.00 1.00 .........................................................................TGAGATTCTTCTACTCTACTTT............................. 22 1 4.00 2.00 0.00 0.00 2.00 ...............................AGTATAATAGCAGGCTTATCACA...................................................................... 23 1 4.00 3.00 1.00 0.00 0.00 ...............................AGTAGAATAGCAGGCTTATCTCA...................................................................... 23 1 4.00 2.00 1.00 1.00 0.00 .................................TAGAATAGCAGGCTTATCAC....................................................................... 20 1 4.00 2.00 1.00 1.00 0.00 .................................TAGAATAGCAGGCTTATCACAG..................................................................... 22 1 4.00 1.00 2.00 0.00 1.00 ...............................AGTAGAATAGCAAGCTTATCACA...................................................................... 23 1 4.00 4.00 0.00 0.00 0.00 .........................................................................TGAGATTATTCTATTCTACTTT............................. 22 1 3.00 0.00 0.00 2.00 1.00 ...............................AGGAGAATAGCAGGCTTATCAC....................................................................... 22 1 3.00 0.00 3.00 0.00 0.00 ...............................AGTAGAATGGCAGGCTTATCACA...................................................................... 23 1 3.00 2.00 1.00 0.00 0.00 ...............................AGTAGAATAGCAGGCTTATCT........................................................................ 21 1 3.00 3.00 0.00 0.00 0.00 ...............................ATTAGAATAGCAGGCTTATCACA...................................................................... 23 1 3.00 2.00 1.00 0.00 0.00 ...............................AGTAGAATAGCACGCTTATCACA...................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 .................................TAGAATAGCAGGCTTATCACAGG.................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 ...............................AGTAGAATAGAAGGCTTATCACA...................................................................... 23 1 3.00 2.00 1.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396426:441185-441310 +	74.24	GGAT-TTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACA-ACACCCGTTAACATCA---CACCCGA GGATATTTCAACGACCGGAGTGCTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTTC-TTTAGCCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGCTAACACCGTTCTACTGGG Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrXR_group8:344159-344293 -	71.11	GGATT----TTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACA-ACACCCGTTAACATCACA--------CCCGA GGATATGGCTAGCACGATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCAATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTAATAGAGCAGCCCTC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ..................................AGTAGAATAGCAGGCTTATCACA.............................................................................. 23 1 3527.00 1481.00 1926.00 59.00 61.00 ............................................................................TGAGATTCTTCTATTCTACTTT..................................... 22 1 1534.00 215.00 1099.00 203.00 17.00 ..................................AGTAGAATAGCAGGCTTATCAC............................................................................... 22 1 560.00 119.00 434.00 6.00 1.00 ..................................AGTAGAATAGCAGGCTTATCA................................................................................ 21 1 346.00 280.00 40.00 20.00 6.00 ..................................AGTAGAATAGCAGGCTTATC................................................................................. 20 1 99.00 67.00 28.00 3.00 1.00 ............................................................................TGAGATTCTTCTATTCTACTT...................................... 21 1 98.00 27.00 45.00 24.00 2.00 .........................................................TGTTCCATTCAATCCGCTG........................................................... 19 1 81.00 0.00 75.00 1.00 5.00 ....................................TAGAATAGCAGGCTTATCACA.............................................................................. 21 1 56.00 27.00 29.00 0.00 0.00 ..................................AGGAGAATAGCAGGCTTATCACA.............................................................................. 23 1 27.00 0.00 27.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCACC.............................................................................. 23 1 27.00 6.00 19.00 0.00 2.00 ............................................................................TGAGATTCTTCTATTCTACT....................................... 20 1 25.00 6.00 11.00 8.00 0.00 ..................................AGTAGAATAGCAGGCTTAT.................................................................................. 19 1 22.00 13.00 8.00 0.00 1.00 ..................................AGTAGAATAGCAGGATTATCACA.............................................................................. 23 1 20.00 0.00 20.00 0.00 0.00 ..................................AGAAGAATAGCAGGCTTATCACA.............................................................................. 23 1 12.00 0.00 11.00 1.00 0.00 ............................................................................TGAGATTCTTCTATTATACTTT..................................... 22 1 11.00 0.00 9.00 2.00 0.00 ..................................AGTAGAATAGCAGGCTTCTCACA.............................................................................. 23 1 10.00 1.00 9.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCCCA.............................................................................. 23 1 10.00 3.00 7.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTGTCACA.............................................................................. 23 1 9.00 0.00 9.00 0.00 0.00 ..................................AGCAGAATAGCAGGCTTATCACA.............................................................................. 23 1 8.00 0.00 6.00 2.00 0.00 ....................................TAGAATAGCAGGCTTATCAC............................................................................... 20 1 8.00 0.00 8.00 0.00 0.00 ............................................................................TGAGATTCTTCTATTCTACTTTT.................................... 23 1 8.00 4.00 3.00 1.00 0.00 ..................................AGTAGAATAGCAGGCTTATCACAA............................................................................. 24 1 8.00 2.00 6.00 0.00 0.00 .............................................................................GAGATTCTTCTATTCTACTTT..................................... 21 1 7.00 0.00 6.00 0.00 1.00 ..................................AGTAGAATAGCAGGCTTATCACG.............................................................................. 23 1 7.00 3.00 4.00 0.00 0.00 ............................................................................TGAGTTTCTTCTATTCTACTTT..................................... 22 1 7.00 0.00 7.00 0.00 0.00 ............................................................................TGAGATTCTTCTATTCTCCTTT..................................... 22 1 7.00 0.00 4.00 3.00 0.00 ..................................AGTAGAATAGCAGGCCTATCACA.............................................................................. 23 1 7.00 3.00 4.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCTCA.............................................................................. 23 1 7.00 1.00 6.00 0.00 0.00 ..................................AGTAGGATAGCAGGCTTATCACA.............................................................................. 23 1 7.00 0.00 7.00 0.00 0.00 ..................................AGTAGAATAGCCGGCTTATCACA.............................................................................. 23 1 7.00 0.00 7.00 0.00 0.00 ..................................AGTAGAATAGAAGGCTTATCACA.............................................................................. 23 1 6.00 0.00 5.00 1.00 0.00 ............................................................................TGAGATTCTTCTATTCTACTTTA.................................... 23 1 6.00 1.00 3.00 2.00 0.00 ..................................AGTAGAATAGCTGGCTTATCACA.............................................................................. 23 1 6.00 1.00 5.00 0.00 0.00 ..................................AGTAGAATAGCAGACTTATCACA.............................................................................. 23 1 6.00 1.00 5.00 0.00 0.00 ....................................TAGAATAGCAGGCTTATCACATG............................................................................ 23 1 6.00 2.00 4.00 0.00 0.00 ..................................AGGAGAATAGAAGGCTTATCACA.............................................................................. 23 1 5.00 0.00 5.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTACCACA.............................................................................. 23 1 5.00 1.00 4.00 0.00 0.00 ............................................................................TGAGATTATTCTATTCTACTTT..................................... 22 1 5.00 0.00 5.00 0.00 0.00 ............................................................................TGGGATTCTTCTATTCTACTTT..................................... 22 1 5.00 1.00 4.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCGCA.............................................................................. 23 1 5.00 0.00 5.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCAAA.............................................................................. 23 1 5.00 1.00 4.00 0.00 0.00 ............................................................................TGAGATTCTTATATTCTACTTT..................................... 22 1 5.00 0.00 5.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCATA.............................................................................. 23 1 5.00 1.00 4.00 0.00 0.00 ............................................................................TGAGATTCTTCTATTCTACTTTC.................................... 23 1 5.00 2.00 3.00 0.00 0.00 ............................................................................TGAGGTTCTTCTATTCTACTTT..................................... 22 1 5.00 0.00 4.00 0.00 1.00 ..................................AGTAGAATGGCAGGCTTATCACA.............................................................................. 23 1 5.00 2.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCT................................................................................ 21 1 5.00 3.00 0.00 2.00 0.00 ..................................AGTAGAATAGCAGGCTTATCACT.............................................................................. 23 1 5.00 1.00 4.00 0.00 0.00 ............................................................................TGAGATTCTTCTATTCTAC........................................ 19 1 5.00 1.00 4.00 0.00 0.00 ..................................AGTAGAATACCAGGCTTATCACA.............................................................................. 23 1 5.00 2.00 2.00 0.00 1.00 ..................................AGTAGAATAGCAGGCTTTT.................................................................................. 19 1 4.00 4.00 0.00 0.00 0.00 ..................................AGTAGAATAACAGGCTTATCACA.............................................................................. 23 1 4.00 1.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCAT............................................................................... 22 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TGAGCTTCTTCTATTCTACTTT..................................... 22 1 4.00 0.00 4.00 0.00 0.00 ..................................AGTAGAATAGCAGGTTTATCACA.............................................................................. 23 1 4.00 1.00 2.00 1.00 0.00 ..................................AGTGGAATAGCAGGCTTATCACA.............................................................................. 23 1 4.00 1.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCGTATCAC............................................................................... 22 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TGAGATTCTTCTATTCTGCTTT..................................... 22 1 4.00 0.00 4.00 0.00 0.00 ............................................................................TGAGATTCTTCTTTTCTACTTT..................................... 22 1 4.00 0.00 4.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCCCC.............................................................................. 23 1 4.00 0.00 4.00 0.00 0.00 ..................................AGTAGAATAGCATGCTTATCACA.............................................................................. 23 1 4.00 1.00 3.00 0.00 0.00 ..................................AGTAGAATATCAGGCTTATCACA.............................................................................. 23 1 3.00 0.00 2.00 0.00 1.00 ..................................AGTAGAATAGCGGGCTTATCAC............................................................................... 22 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGATTATCAC............................................................................... 22 1 3.00 0.00 3.00 0.00 0.00 ............................................................................TGAGATTCTTCTCTTCTACTTT..................................... 22 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCGTATCACA.............................................................................. 23 1 3.00 1.00 2.00 0.00 0.00 ............................................................................TGGGATTCTTCTATTCTTCTTT..................................... 22 1 3.00 0.00 2.00 1.00 0.00 ............................................................................TGAGATTCTTCTATTCTACCTT..................................... 22 1 3.00 0.00 3.00 0.00 0.00 ..................................GGTAGAATAGCAGGCTTATCACA.............................................................................. 23 1 3.00 2.00 1.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTCATCACA.............................................................................. 23 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTA................................................................................... 18 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGTAGGCTTATCACA.............................................................................. 23 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATTACA.............................................................................. 23 1 3.00 0.00 3.00 0.00 0.00 ..................................AGGAGAATAGCAGGCTTATCAC............................................................................... 22 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTAGCACA.............................................................................. 23 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCAA............................................................................... 22 1 3.00 2.00 1.00 0.00 0.00 .....................................AGAATAGCAGGCTTATCACA.............................................................................. 20 1 3.00 2.00 1.00 0.00 0.00 ..................................AATAGAATAGCAGGCTTATCACA.............................................................................. 23 1 3.00 2.00 1.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATCAGA.............................................................................. 23 1 3.00 0.00 3.00 0.00 0.00 ............................................................................TGAGAGTCTTCTATTCTACTTT..................................... 22 1 3.00 0.00 3.00 0.00 0.00 ............................................................................TGTGATTCTTCTATTCTACTTT..................................... 22 1 3.00 0.00 3.00 0.00 0.00 ............................................................................TGAGATTCTTCTATTCTAATTT..................................... 22 1 3.00 0.00 3.00 0.00 0.00 ..................................AGTAGAATAGCAGGCTTATAACA.............................................................................. 23 1 3.00 0.00 2.00 1.00 0.00

droPer1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	super_96:132292-132395 +	74.29	GGATTTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACA-ACACCCGTTAACATCACACCCGA G-----------ATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCAATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATC-------- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ..............................AGTAGAATAGCAGGCTTATCACA...................................................................... 23 1 1335.00 274.00 287.00 12.00 6.00 756.00 ........................................................................TGAGATTCTTCTATTCTACTTT............................. 22 1 502.00 33.00 340.00 7.00 1.00 121.00 .....................................................TGTTCCATTCAATCCGCTG................................................... 19 1 365.00 0.00 18.00 0.00 0.00 347.00 ..............................AGTAGAATAGCAGGCTTATCAC....................................................................... 22 1 129.00 20.00 97.00 0.00 0.00 12.00 ..............................AGTAGAATAGCAGGCTTATCA........................................................................ 21 1 114.00 88.00 11.00 2.00 2.00 11.00 ..............................AGTAGAATAGCAGGCTTATC......................................................................... 20 1 58.00 36.00 13.00 0.00 1.00 8.00 ..............................AGTAGAATAGCAGGCTTATCACC...................................................................... 23 1 31.00 0.00 4.00 0.00 1.00 26.00 ........................................................................TGAGATTCTTCTATTCTACTT.............................. 21 1 28.00 2.00 16.00 1.00 0.00 9.00 ..............................AGTAGAATAGCAGGCTTAT.......................................................................... 19 1 21.00 11.00 8.00 0.00 0.00 2.00 ..............................AGTAGAATAGCAGGCTTATCACG...................................................................... 23 1 20.00 0.00 1.00 0.00 0.00 19.00 ................................TAGAATAGCAGGCTTATCACA...................................................................... 21 1 13.00 4.00 4.00 1.00 2.00 2.00 ...............................GTAGAATAGCAGGCTTATCACA...................................................................... 22 1 11.00 0.00 1.00 0.00 0.00 10.00 ........................................................................TGAGATTCTTCTATTCTACT............................... 20 1 9.00 3.00 5.00 0.00 0.00 1.00 ......................................................GTTCCATTCAATCCGCTG................................................... 18 1 9.00 0.00 0.00 0.00 0.00 9.00 ........................................................................TGAGATTCTTCTATTCTAC................................ 19 1 9.00 0.00 9.00 0.00 0.00 0.00 ................................................................ATCCGCTGTGAGATTCTTCT....................................... 20 1 8.00 0.00 1.00 0.00 0.00 7.00 ............................................................................ATTCTTCTATTCTACTTT............................. 18 1 7.00 0.00 0.00 0.00 0.00 7.00 ...........................................................................GATTCTTCTATTCTACTTT............................. 19 1 6.00 0.00 1.00 0.00 0.00 5.00 ..............................AGTAGAATAGCAGGCTTATCCCA...................................................................... 23 1 5.00 0.00 3.00 0.00 0.00 2.00 .................................AGAATAGCAGGCTTATCACA...................................................................... 20 1 5.00 0.00 1.00 0.00 0.00 4.00 ...................................................................CGCTGTGAGATTCTTCTATT.................................... 20 1 5.00 0.00 0.00 0.00 0.00 5.00 ..............................AGTAGAATAGCAGGCTTATCACAA..................................................................... 24 1 4.00 4.00 0.00 0.00 0.00 0.00 .........................................................................GAGATTCTTCTATTCTACTTT............................. 21 1 4.00 1.00 0.00 0.00 0.00 3.00 ..............................AGTAGAATACCAGGCTTATCACA...................................................................... 23 1 4.00 0.00 0.00 0.00 0.00 4.00 ..............................AGTAGAATAGCAAGCTTATCACA...................................................................... 23 1 4.00 0.00 1.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGTCTTATCACA...................................................................... 23 1 3.00 0.00 1.00 0.00 0.00 2.00 .....................................................TGTTCCATTCAATCCGCGG................................................... 19 1 3.00 0.00 0.00 0.00 0.00 3.00 ..............................AGTAGAATAGCAGGCTTATCAT....................................................................... 22 1 3.00 1.00 2.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGATTATCACA...................................................................... 23 1 3.00 0.00 3.00 0.00 0.00 0.00 ..............................AGGAGAATAGCAGGCTTATCACA...................................................................... 23 1 3.00 0.00 3.00 0.00 0.00 0.00 ..............................AGTAGAATAGCAGGCTTATCCC....................................................................... 22 1 3.00 0.00 2.00 0.00 0.00 1.00 ..............................AGTAGAATAGCAGGCTTATTACA...................................................................... 23 1 3.00 0.00 2.00 0.00 0.00 1.00 ..................................................................CCGCTGTGAGATTCTTCTATTCTACTTT............................. 28 1 3.00 0.00 0.00 0.00 0.00 3.00 ..................................GAATAGCAGGCTTATCACA...................................................................... 19 1 3.00 0.00 0.00 0.00 0.00 3.00 ........................................................................TGAGATTCTTCTGTTCTACTTT............................. 22 1 3.00 0.00 0.00 0.00 0.00 3.00

droWil1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_180698:7060886-7061014 +	71.39	GGATTTTCCACGAT----------CGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCCGA TGAGTTTTGACTATGACTATCTAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCCTTTACAACCGGTGTGAGATTCTTCTATTCTACTTTCGAAAAGCACCCGATAACAACAAA----- Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ........................................AGTAGAATAGCAGGCTTATCACA....................................................................... 23 1 19307.00 290.00 18556.00 190.00 271.00 ...................................................................................TGAGATTCTTCTATTCTACTTT............................. 22 1 4348.00 226.00 4038.00 35.00 49.00 ........................................AGTAGAATAGCAGGCTTATCAC........................................................................ 22 1 1563.00 14.00 1498.00 50.00 1.00 ..........................................TAGAATAGCAGGCTTATCACA....................................................................... 21 1 410.00 63.00 334.00 13.00 0.00 ...................................................................................TGAGATTCTTCTATTCTACTT.............................. 21 1 262.00 40.00 206.00 11.00 5.00 ........................................AGTAGAATAGCAGGCTTATCA......................................................................... 21 1 243.00 11.00 226.00 5.00 1.00 ........................................AGTAGAATAGCAGGCTTATC.......................................................................... 20 1 174.00 19.00 150.00 3.00 2.00 ..........................................TAGAATAGCAGGCTTATCACATG..................................................................... 23 1 64.00 3.00 61.00 0.00 0.00 ...................................................................................TGAGATTCTTCTATTCTACT............................... 20 1 55.00 14.00 33.00 6.00 2.00 ........................................AGCAGAATAGCAGGCTTATCACA....................................................................... 23 1 46.00 1.00 45.00 0.00 0.00 ........................................ATTAGAATAGCAGGCTTATCACA....................................................................... 23 1 44.00 1.00 43.00 0.00 0.00 ........................................AGTATAATAGCAGGCTTATCACA....................................................................... 23 1 41.00 1.00 39.00 1.00 0.00 ........................................AGTAGAATAGCAGTCTTATCACA....................................................................... 23 1 37.00 0.00 37.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTAT........................................................................... 19 1 36.00 14.00 21.00 0.00 1.00 ........................................AGTAGAATAGCATGCTTATCACA....................................................................... 23 1 30.00 0.00 30.00 0.00 0.00 ........................................AGTAGAATAGAAGGCTTATCACA....................................................................... 23 1 29.00 0.00 29.00 0.00 0.00 ........................................AGTAGAATAGCAGGATTATCACA....................................................................... 23 1 28.00 0.00 28.00 0.00 0.00 ........................................AGTAxAATAGCAGGCTTATCACA....................................................................... 22 1 27.00 0.00 27.00 0.00 0.00 ........................................AGTAGAATAGCGGGCTTATCACA....................................................................... 23 1 26.00 0.00 25.00 1.00 0.00 .........................................GTAGAATAGCAGGCTTATCACA....................................................................... 22 1 23.00 0.00 21.00 0.00 2.00 ........................................AGTAAAATAGCAGGCTTATCACA....................................................................... 23 1 22.00 0.00 22.00 0.00 0.00 ........................................AGTAGAATACCAGGCTTATCACA....................................................................... 23 1 22.00 1.00 21.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATCCCA....................................................................... 23 1 22.00 0.00 21.00 1.00 0.00 ........................................AGTAGAATAGCAGGCTTATCACC....................................................................... 23 1 21.00 0.00 10.00 0.00 11.00 ........................................AGTAGGATAGCAGGCTTATCACA....................................................................... 23 1 21.00 1.00 20.00 0.00 0.00 ..........................................TAGAATAGCAGGCTTATCAC........................................................................ 20 1 21.00 3.00 15.00 3.00 0.00 ........................................ACTAGAATAGCAGGCTTATCACA....................................................................... 23 1 20.00 1.00 18.00 1.00 0.00 ........................................AGTAGAATAGCAGGCTTACCACA....................................................................... 23 1 20.00 0.00 19.00 0.00 1.00 ........................................AGTAGAATAGCAGGCTTATCACAA...................................................................... 24 1 20.00 0.00 20.00 0.00 0.00 ........................................AGTAGAATATCAGGCTTATCACA....................................................................... 23 1 20.00 0.00 19.00 1.00 0.00 ........................................AGTGGAATAGCAGGCTTATCACA....................................................................... 23 1 19.00 1.00 18.00 0.00 0.00 ...................................................................................TGAGATTCTTCTATTCTACTTTT............................ 23 1 19.00 2.00 15.00 0.00 2.00 ........................................AGTAGAATAGCAGGCTTATCACG....................................................................... 23 1 18.00 0.00 16.00 0.00 2.00 ........................................AGTAGAATAGCAGGCTTATCGCA....................................................................... 23 1 18.00 0.00 17.00 1.00 0.00 ........................................AGTAGAATAGCAGGCTCATCACA....................................................................... 23 1 18.00 0.00 18.00 0.00 0.00 ........................................AGTAGAGTAGCAGGCTTATCACA....................................................................... 23 1 17.00 0.00 17.00 0.00 0.00 ........................................AGGAGAATAGCAGGCTTATCACA....................................................................... 23 1 17.00 0.00 17.00 0.00 0.00 ...................................................................................TGAGATTCTTCTATTCTAC................................ 19 1 16.00 1.00 13.00 1.00 1.00 ........................................AATAGAATAGCAGGCTTATCACA....................................................................... 23 1 16.00 0.00 15.00 1.00 0.00 ........................................AGTAGACTAGCAGGCTTATCACA....................................................................... 23 1 16.00 0.00 15.00 0.00 1.00 ...................................................................................TGAGATTCTTCTATTCTA................................. 18 1 16.00 0.00 15.00 1.00 0.00 ........................................AGTACAATAGCAGGCTTATCACA....................................................................... 23 1 14.00 0.00 14.00 0.00 0.00 ........................................AGTAGAACAGCAGGCTTATCACA....................................................................... 23 1 14.00 0.00 14.00 0.00 0.00 ........................................AGTAGAATGGCAGGCTTATCACA....................................................................... 23 1 14.00 1.00 13.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATAACA....................................................................... 23 1 13.00 0.00 13.00 0.00 0.00 ........................................AGTAGAATAGCAGACTTATCACA....................................................................... 23 1 13.00 1.00 12.00 0.00 0.00 ...........................................AGAATAGCAGGCTTATCACA....................................................................... 20 1 13.00 1.00 12.00 0.00 0.00 ........................................AGTAGAATAGCAGGCCTATCACA....................................................................... 23 1 13.00 0.00 13.00 0.00 0.00 ........................................GGTAGAATAGCAGGCTTATCACA....................................................................... 23 1 13.00 1.00 12.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATCATA....................................................................... 23 1 13.00 0.00 13.00 0.00 0.00 ...................................................................................TGAGCTTCTTCTATTCTACTTT............................. 22 1 11.00 0.00 11.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTA............................................................................ 18 1 11.00 0.00 10.00 1.00 0.00 ........................................AGTAGAATCGCAGGCTTATCACA....................................................................... 23 1 10.00 0.00 10.00 0.00 0.00 ........................................AGTAGAATAACAGGCTTATCACA....................................................................... 23 1 10.00 0.00 9.00 1.00 0.00 ........................................AGTAGAATxxCAGGCTTATCACA....................................................................... 21 1 10.00 0.00 10.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATCAAA....................................................................... 23 1 10.00 0.00 9.00 1.00 0.00 ...................................................................................TGAGATTCTTCTATCCTACTTT............................. 22 1 9.00 0.00 9.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATTACA....................................................................... 23 1 9.00 0.00 9.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTCTCACA....................................................................... 23 1 9.00 0.00 9.00 0.00 0.00 ...................................................................................TTAGATTCTTCTATTCTACTTT............................. 22 1 8.00 0.00 8.00 0.00 0.00 ...................................................................................TGATATTCTTCTATTCTACTTT............................. 22 1 8.00 1.00 7.00 0.00 0.00 .......................................CAGTAGAATAGCAGGCTTATCACA....................................................................... 24 1 8.00 0.00 7.00 1.00 0.00 ........................................AGTAGAATAGCCGGCTTATCACA....................................................................... 23 1 8.00 1.00 7.00 0.00 0.00 ..........................................TAGAATAGCAGGCTTATCACAT...................................................................... 22 1 8.00 7.00 1.00 0.00 0.00 ....................................................................................GAGATTCTTCTATTCTACTTT............................. 21 1 8.00 1.00 7.00 0.00 0.00 ........................................AGAAGAATAGCAGGCTTATCACA....................................................................... 23 1 8.00 0.00 8.00 0.00 0.00 .......................................AAGTAGAATAGCAGGCTTATCAC........................................................................ 23 1 7.00 0.00 5.00 0.00 2.00 ........................................AGTCGAATAGCAGGCTTATCACA....................................................................... 23 1 7.00 1.00 5.00 1.00 0.00 ...................................................................................TGAGATTCTTCCATTCTACTTT............................. 22 1 7.00 1.00 6.00 0.00 0.00 ...................................................................................CGAGATTCTTCTATTCTACTTT............................. 22 1 6.00 1.00 5.00 0.00 0.00 ........................................AGTAGAATAGCAGCCTTATCACA....................................................................... 23 1 6.00 0.00 6.00 0.00 0.00 ..................................................................................CTGAGATTCTTCTATTCTACTTT............................. 23 1 6.00 0.00 6.00 0.00 0.00 ........................................TGTAGAATAGCAGGCTTATCACA....................................................................... 23 1 6.00 0.00 6.00 0.00 0.00 ........................................AGTAGAATAGTAGGCTTATCACA....................................................................... 23 1 6.00 0.00 5.00 1.00 0.00 ........................................AGTAGAATAGCAAGCTTATCACA....................................................................... 23 1 6.00 0.00 6.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATCACT....................................................................... 23 1 6.00 1.00 5.00 0.00 0.00 ...................................................................................TGAGATTCTTCTATTCTACTTTA............................ 23 1 5.00 2.00 3.00 0.00 0.00 ........................................ATTAGAATAGCAGGCTTATCAC........................................................................ 22 1 5.00 1.00 3.00 1.00 0.00 ...................................................................................TGAGGTTCTTCTATTCTACTTT............................. 22 1 5.00 0.00 5.00 0.00 0.00 ...............................................................TGTTCCCTTTACAACCGGTG................................................... 20 1 5.00 0.00 5.00 0.00 0.00 .......................................AAGTAGAATAGCAGGCTTATCACA....................................................................... 24 1 5.00 0.00 2.00 0.00 3.00 ...................................................................................TGAGATTCTTCTATTCTTCTTT............................. 22 1 5.00 0.00 5.00 0.00 0.00 ........................................AGTAGAATAGCACGCTTATCACA....................................................................... 23 1 5.00 0.00 5.00 0.00 0.00 ...................................................................................TGAGATTCCTCTATTCTACTTT............................. 22 1 5.00 0.00 5.00 0.00 0.00 ...................................................................................TGAGATTATTCTATTCTACTTT............................. 22 1 5.00 0.00 5.00 0.00 0.00 ........................................AGCAGAATAGCAGGCTTATCAC........................................................................ 22 1 5.00 1.00 3.00 1.00 0.00 ...................................................................................TGAGATTCTTCTATTCCACTTT............................. 22 1 4.00 0.00 4.00 0.00 0.00 ...................................................................................TGAGATTCTTCTATTCTACCTT............................. 22 1 4.00 0.00 4.00 0.00 0.00 ........................................CGTAGAATAGCAGGCTTATCACA....................................................................... 23 1 4.00 1.00 2.00 1.00 0.00 ...................................................................................TGAGATTCTTCTATTCTACTTTC............................ 23 1 4.00 0.00 4.00 0.00 0.00 ............................................GAATAGCAGGCTTATCACA....................................................................... 19 1 4.00 0.00 4.00 0.00 0.00 ...................................................................................TGAGATTCTTATATTCTACTTT............................. 22 1 4.00 0.00 4.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTGTCACA....................................................................... 23 1 4.00 0.00 4.00 0.00 0.00 ........................................AGTAGAATTGCAGGCTTATCACA....................................................................... 23 1 3.00 0.00 3.00 0.00 0.00 ........................................AGTAGAATAGCATGCTTATCAC........................................................................ 22 1 3.00 0.00 3.00 0.00 0.00 ...................................................................................TGAGATTCTTCTATTCTACTCT............................. 22 1 3.00 1.00 2.00 0.00 0.00 ........................................AGTAGAATAACAGGCTTATCAC........................................................................ 22 1 3.00 0.00 3.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATCAT........................................................................ 22 1 3.00 0.00 3.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTCATCAC........................................................................ 22 1 3.00 0.00 3.00 0.00 0.00 ........................................AGTAGAATAGCAGGCTTATCACATGT.................................................................... 26 1 3.00 1.00 2.00 0.00 0.00 ........................................AGGAGAATAGCAGGCTTATCAC........................................................................ 22 1 3.00 0.00 3.00 0.00 0.00

droVir3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13049:17089392-17089522 +	66.62	GGATTTTCCA-----------------CGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACA-ACACCCGTTAACATCACACCCGA TGTTTTTTTAATGTTCTCTATATATTTTGATCGGTGTGGAT-TGGCAAGTAGAATAGCAGGCTTATCACATGTACAATTCAACCTAGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTC-------- Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ...............................................AGTAGAATAGCAGGCTTATCACA...................................................................... 23 1 2931.00 1295.00 8.00 511.00 1102.00 15.00 .........................................................................................TGAGATTCTTCTATTCTACTTT............................. 22 1 872.00 633.00 14.00 115.00 107.00 3.00 ...............................................AGTAGAATAGCAGGCTTATCA........................................................................ 21 1 351.00 308.00 3.00 10.00 30.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCAC....................................................................... 22 1 230.00 113.00 4.00 75.00 37.00 1.00 .........................................................................................TGAGATTCTTCTATTCTACTT.............................. 21 1 156.00 135.00 3.00 4.00 14.00 0.00 ...............................................AGTAGAATAGCAGGCTTATC......................................................................... 20 1 61.00 44.00 0.00 12.00 5.00 0.00 .................................................TAGAATAGCAGGCTTATCACA...................................................................... 21 1 36.00 30.00 0.00 6.00 0.00 0.00 .........................................................................................TGAGATTCTTCTATTCTACT............................... 20 1 32.00 27.00 0.00 1.00 4.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCACG...................................................................... 23 1 32.00 1.00 0.00 1.00 30.00 0.00 ...............................................AGTAGAATAGCAGGCTTAT.......................................................................... 19 1 31.00 25.00 0.00 3.00 3.00 0.00 ..............................................AAGTAGAATAGCAGGCTTATCACA...................................................................... 24 1 21.00 6.00 0.00 1.00 14.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCACT...................................................................... 23 1 13.00 12.00 0.00 0.00 1.00 0.00 ..............................................AAGTAGAATAGCAGGCTTATCAC....................................................................... 23 1 12.00 6.00 0.00 2.00 4.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCACC...................................................................... 23 1 12.00 6.00 0.00 5.00 1.00 0.00 .........................................................................................TGAGATTCTTCTATTCTACTTTT............................ 23 1 12.00 10.00 0.00 2.00 0.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCT........................................................................ 21 1 11.00 11.00 0.00 0.00 0.00 0.00 ..............................................AAGTAGAATAGCAGGCTTATCA........................................................................ 22 1 10.00 7.00 0.00 1.00 2.00 0.00 ...............................................AGGAGAATAGCAGGCTTATCACA...................................................................... 23 1 9.00 2.00 0.00 6.00 1.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCCCA...................................................................... 23 1 9.00 2.00 0.00 4.00 2.00 1.00 ...............................................AGTAGAATAGCAGGCTTATCACAT..................................................................... 24 1 8.00 6.00 0.00 0.00 2.00 0.00 ...............................................ATTAGAATAGCAGGCTTATCACA...................................................................... 23 1 7.00 5.00 0.00 1.00 1.00 0.00 ...............................................AGTAGAATCGCAGGCTTATCACA...................................................................... 23 1 7.00 1.00 0.00 1.00 5.00 0.00 ...............................................AGTAGAATACCAGGCTTATCACA...................................................................... 23 1 5.00 1.00 0.00 2.00 2.00 0.00 ...............................................AGTAGAATAGCAGCCTTATCACA...................................................................... 23 1 5.00 1.00 0.00 3.00 1.00 0.00 ...............................................AGTAGAATATCAGGCTTATCACA...................................................................... 23 1 5.00 0.00 0.00 1.00 4.00 0.00 ...............................................GGTAGAATAGCAGGCTTATCACA...................................................................... 23 1 5.00 0.00 0.00 2.00 3.00 0.00 .................................................TAGAATAGCAGGCTTATCAC....................................................................... 20 1 5.00 2.00 0.00 3.00 0.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCACTT..................................................................... 24 1 4.00 0.00 0.00 0.00 4.00 0.00 ...............................................AGTAGAATAGCAGTCTTATCACA...................................................................... 23 1 4.00 1.00 0.00 3.00 0.00 0.00 ...............................................AGTAGAATAGCAGGCTTATAACA...................................................................... 23 1 4.00 2.00 0.00 1.00 1.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCAT....................................................................... 22 1 4.00 4.00 0.00 0.00 0.00 0.00 ...............................................AGTAGAGTAGCAGGCTTATCACA...................................................................... 23 1 4.00 3.00 0.00 0.00 1.00 0.00 ...............................................AGTAGAATAGCAGGCTTCTCACA...................................................................... 23 1 4.00 0.00 0.00 4.00 0.00 0.00 ................................................GTAGAATAGCAGGCTTATCACA...................................................................... 22 1 4.00 2.00 0.00 0.00 2.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCGCA...................................................................... 23 1 4.00 4.00 0.00 0.00 0.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCAAA...................................................................... 23 1 4.00 2.00 1.00 1.00 0.00 0.00 ...............................................AGTAGAATAGCCGGCTTATCACA...................................................................... 23 1 4.00 0.00 0.00 2.00 2.00 0.00 ..............................................CAGTAGAATAGCAGGCTTATCACA...................................................................... 24 1 3.00 2.00 0.00 1.00 0.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCACAA..................................................................... 24 1 3.00 2.00 0.00 0.00 1.00 0.00 ...............................................AGTAGAATAGCAAGCTTATCACA...................................................................... 23 1 3.00 1.00 0.00 1.00 1.00 0.00 ...............................................AGTAGAATAGCGGGCTTATCACA...................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 0.00 .............................................CAAGTAGAATAGCAGGCTTATCA........................................................................ 23 1 3.00 1.00 0.00 0.00 2.00 0.00 ...............................................AGTAGAATAGCAGGCTTATCTCA...................................................................... 23 1 3.00 0.00 0.00 2.00 1.00 0.00 ...............................................AGTAGAATAGCAGGCTTA........................................................................... 18 1 3.00 0.00 0.00 2.00 1.00 0.00 ...............................................AGTAGAATAACAGGCTTATCACA...................................................................... 23 1 3.00 1.00 0.00 2.00 0.00 0.00 ...............................................AGCAGAATAGCAGGCTTATCACA...................................................................... 23 1 3.00 0.00 0.00 3.00 0.00 0.00 ...............................................AGTAGAATAGCAGGCCTATCACA...................................................................... 23 1 3.00 0.00 0.00 0.00 3.00 0.00 .........................................................................................TGAGATTCTTCTATTCTACTTC............................. 22 1 3.00 0.00 1.00 0.00 2.00 0.00 ...............................................AGAAGAATAGCAGGCTTATCACA...................................................................... 23 1 3.00 0.00 0.00 3.00 0.00 0.00 .........................................................................................TGAGATTCTTCTGTTCTACTTT............................. 22 1 3.00 1.00 0.00 1.00 1.00 0.00 ...............................................AGTAGAATAGCAGGCTTATT......................................................................... 20 1 3.00 2.00 0.00 0.00 1.00 0.00

droMoj3 - 1 hit found