Possible Orthologs for dme-mir-79

droSim1 - 0 hit found

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_7:345550-345676 +	94.55	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT ATGAGTGCCTCAGAGTGTAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTGTGCAGATCAATCGTCAGAAACAAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................................................................TAAAGCTAGATTACCAAAGCAT............................... 22 1 11761.00 3450.00 3525.00 4786.00 .........................................................................ATAAAGCTAGATTACCAAAGCAT............................... 23 1 7334.00 1672.00 1575.00 4087.00 .................................GCTTTGGCGCTTTAGCTGTATG........................................................................ 22 1 372.00 8.00 292.00 72.00 ..........................................................................TAAAGCTAGATTACCAAAGCA................................ 21 1 338.00 53.00 70.00 215.00 ...........................................................................AAAGCTAGATTACCAAAGCAT............................... 21 1 250.00 80.00 41.00 129.00 ..........................................................................TAAAGCTAGATTACCAAAGC................................. 20 1 248.00 21.00 24.00 203.00 .........................................................................ATAAAGCTAGATTACCAAAGCA................................ 22 1 214.00 30.00 32.00 152.00 ..........................................................................TAAAGCTAGATTACCAAAG.................................. 19 1 211.00 4.00 8.00 199.00 .........................................................................ATAAAGCTAGATTACCAAAG.................................. 20 1 127.00 13.00 5.00 109.00 .................................GCTTTGGCGCTTTAGCTGTATGA....................................................................... 23 1 81.00 4.00 72.00 5.00 ..........................................................................TAAAGCTAGATTACCAAACCAT............................... 22 1 61.00 32.00 11.00 18.00 ..........................................................................TAAGGCTAGATTACCAAAGCAT............................... 22 1 59.00 8.00 4.00 47.00 ..........................................................................TAAAGCTAGATTACCAAAGTAT............................... 22 1 56.00 0.00 49.00 7.00 .........................................................................ATAAAGCTAGATTACCAAAGC................................. 21 1 55.00 6.00 6.00 43.00 ..........................................................................TAAATCTAGATTACCAAAGCAT............................... 22 1 50.00 7.00 20.00 23.00 ..........................................................................TAAAGCTAGATTACCAAATCAT............................... 22 1 45.00 20.00 13.00 12.00 ..........................................................................TAAACCTAGATTACCAAAGCAT............................... 22 1 34.00 5.00 12.00 17.00 ..........................................................................TAAAGCTAGATTACCAAAGCATT.............................. 23 1 34.00 8.00 6.00 20.00 ..........................................................................TAAAGCTGGATTACCAAAGCAT............................... 22 1 31.00 5.00 3.00 23.00 ..........................................................................TAAAGCTAGATTACCAAAACAT............................... 22 1 29.00 20.00 3.00 6.00 ..........................................................................TAAAGCTAGATTACTAAAGCAT............................... 22 1 26.00 3.00 20.00 3.00 .........................................................................ATAAAGCTGGATTACCAAAGCAT............................... 23 1 26.00 2.00 3.00 21.00 ...........................................................................AAAGCTAGATTACCAAAGCATT.............................. 22 1 26.00 4.00 14.00 8.00 ..........................................................................TAAAGTTAGATTACCAAAGCAT............................... 22 1 24.00 2.00 18.00 4.00 .........................................................................ATAAAGCTAGATTACCAAAGTAT............................... 23 1 24.00 4.00 14.00 6.00 ..........................................................................TGAAGCTAGATTACCAAAGCAT............................... 22 1 24.00 2.00 2.00 20.00 ..........................................................................TAAAGCTAGATTATCAAAGCAT............................... 22 1 21.00 2.00 16.00 3.00 .........................................................................ATAAATCTAGATTACCAAAGCAT............................... 23 1 19.00 1.00 2.00 16.00 ..........................................................................TAGAGCTAGATTACCAAAGCAT............................... 22 1 18.00 6.00 5.00 7.00 .........................................................................ATAAAGCTAGATTACCAACGCAT............................... 23 1 18.00 14.00 1.00 3.00 .........................................................................ATAAACCTAGATTACCAAAGCAT............................... 23 1 17.00 2.00 4.00 11.00 ..........................................................................TAAAGCTAGATTACCAAAGCAC............................... 22 1 17.00 2.00 8.00 7.00 .........................................................................ATAAAGCTAGATTACCAAGGCAT............................... 23 1 16.00 11.00 4.00 1.00 ...........................................................................TAAGCTAGATTACCAAAGCAT............................... 21 1 16.00 1.00 13.00 2.00 ..........................................................................TAAAGCTAGATTACCGAAGCAT............................... 22 1 16.00 4.00 7.00 5.00 .........................................................................ATGAAGCTAGATTACCAAAGCAT............................... 23 1 16.00 0.00 0.00 16.00 ..........................................................................TAAAGATAGATTACCAAAGCAT............................... 22 1 16.00 3.00 3.00 10.00 .........................................................................ATAAGGCTAGATTACCAAAGCAT............................... 23 1 16.00 4.00 0.00 12.00 .........................................................................ACAAAGCTAGATTACCAAAGCAT............................... 23 1 15.00 1.00 5.00 9.00 ..........................................................................TAAAGCTAGATTACCxAAGCAT............................... 21 1 15.00 1.00 10.00 4.00 ..........................................................................TAAAGCTAGATTACCAAAGT................................. 20 2 6.50 2.00 0.50 4.00 ............................................................................AAGCTAGATTACCAAAGCAT............................... 20 1 13.00 4.00 6.00 3.00 .........................................................................ATAAAGTTAGATTACCAAAGCAT............................... 23 1 13.00 0.00 12.00 1.00 ..........................................................................TAAAGCTAGATTACCAAAGCATA.............................. 23 1 13.00 4.00 4.00 5.00 .........................................................................ATAAAGCTAGATTACCAAACCAT............................... 23 1 13.00 2.00 5.00 6.00 ..........................................................................TAAAGCTAGATTACCAAAGAAT............................... 22 1 12.00 2.00 3.00 7.00 ..........................................................................TAAAGCCAGATTACCAAAGCAT............................... 22 1 12.00 4.00 4.00 4.00 ...........................................................................AAAGCTAGATTACCAAAGCA................................ 20 1 12.00 2.00 1.00 9.00 ..........................................................................TAAAGCTAGATTACCAGAGCAT............................... 22 1 12.00 5.00 3.00 4.00 ..........................................................................TAAAGCTAGATTACCAAGGCAT............................... 22 1 11.00 1.00 6.00 4.00 .........................................................................ATAAAGCTAGATTACCAAAGCATT.............................. 24 1 11.00 4.00 1.00 6.00 ..........................................................................TAAAGCTAGATTACCAAAGCCT............................... 22 1 11.00 5.00 2.00 4.00 .........................................................................ATAAAGCTAGATTACCAAATCAT............................... 23 1 11.00 0.00 2.00 9.00 ...................................TTTGGCGCTTTAGCTGTATGA....................................................................... 21 1 11.00 0.00 9.00 2.00 .........................................................................ATAAAGCTAGATTACCAATGCAT............................... 23 1 11.00 7.00 4.00 0.00 .........................................................................ATAAAGCTAGATTATCAAAGCAT............................... 23 1 11.00 0.00 9.00 2.00 .........................................................................GTAAAGCTAGATTACCAAAGCAT............................... 23 1 10.00 2.00 5.00 3.00 .........................................................................ATAAAGCTAGATTACTAAAGCAT............................... 23 1 10.00 1.00 8.00 1.00 .................................GCTTTGGCGCTTTAGCTGTAT......................................................................... 21 1 10.00 0.00 5.00 5.00 .....................................TGGCGCTTAAGTTGTATG........................................................................ 18 1 10.00 0.00 0.00 10.00 .........................................................................ATAAAGCTAGATTACCxAAGCAT............................... 22 1 9.00 1.00 6.00 2.00 .........................................................................ATAAAGCTAGATTACCAAA................................... 19 1 9.00 0.00 1.00 8.00 ..........................................................................TAAAGCTAGATTACCACAGCAT............................... 22 1 9.00 2.00 1.00 6.00 ..........................................................................AAAAGCTAGATTACCAAAGCAT............................... 22 1 9.00 0.00 2.00 7.00 ..........................................................................TAAAGCTATATTACCAAAGCAT............................... 22 1 9.00 2.00 2.00 5.00 ..........................................................................TACAGCTAGATTACCAAAGCAT............................... 22 1 9.00 4.00 3.00 2.00 ..........................................................................TAAAGCTAGATTACCAAAGCAA............................... 22 1 9.00 1.00 5.00 3.00 ..........................................................................TAAAGCTAGGTTACCAAAGCAT............................... 22 1 9.00 2.00 3.00 4.00 ..........................................................................CAAAGCTAGATTACCAAAGCAT............................... 22 1 8.00 3.00 3.00 2.00 ..........................................................................TAAAGCTAGATTACCAAAGCGT............................... 22 1 8.00 0.00 4.00 4.00 ..........................................................................TAAAGCTACATTACCAAAGCAT............................... 22 1 8.00 1.00 1.00 6.00 .........................................................................ATAAAGCTAGATTGCCAAAGCAT............................... 23 1 8.00 2.00 1.00 5.00 ..........................................................................ATAAGCTAGATTACCAAAGCAT............................... 22 1 8.00 0.00 5.00 3.00 ..........................................................................TAAAGCTAGACTACCAAAGCAT............................... 22 1 8.00 4.00 1.00 3.00 ...................................TTTGGCGCTTTAGCTGTATG........................................................................ 20 1 8.00 2.00 2.00 4.00 .........................................................................ATAAAGCTAGATTACCAAAGCGT............................... 23 1 7.00 1.00 1.00 5.00 .........................................................................ATAAAGCTAGATTACCAAAACAT............................... 23 1 7.00 0.00 1.00 6.00 .........................................................................ATAAAGCTAGATTACCAAAGCAA............................... 23 1 7.00 0.00 1.00 6.00 .........................................................................ATAAAGCTAGATTACCCAAGCAT............................... 23 1 7.00 6.00 0.00 1.00 ..........................................................................TAGAGCTGGATTACCAAAGCAT............................... 22 1 6.00 0.00 0.00 6.00 .........................................................................ATAAAGCTAGGTTACCAAAGCAT............................... 23 1 6.00 1.00 3.00 2.00 .........................................................................ATAAAGCTAGATTACCGAAGCAT............................... 23 1 6.00 2.00 1.00 3.00 ..........................................................................TAAAGCTAGATTACAAAAGCAT............................... 22 1 6.00 0.00 3.00 3.00 .........................................................................ATAAAGCTAGACTACCAAAGCAT............................... 23 1 6.00 2.00 1.00 3.00 .........................................................................ATAAAACTAGATTACCAAAGCAT............................... 23 1 6.00 0.00 2.00 4.00 ..........................................................................TAAAGCTAGATCACCAAAGCAT............................... 22 1 6.00 1.00 3.00 2.00 ..........................................................................TAAAGCAAGATTACCAAAGCAT............................... 22 1 6.00 0.00 0.00 6.00 ..........................................................................TAACGCTAGATTACCAAAGCAT............................... 22 1 6.00 4.00 0.00 2.00 .........................................................................ATAAAGCTAGATTACCAAAGAAT............................... 23 1 6.00 0.00 1.00 5.00 .........................................................................ATCAAGCTAGATTACCAAAGCAT............................... 23 1 5.00 3.00 0.00 2.00 .........................................................................CTAAAGCTAGATTACCAAAGCAT............................... 23 1 5.00 2.00 2.00 1.00 ...........................................................................TAATCTAGATTACCAAAGCAT............................... 21 1 5.00 0.00 3.00 2.00 .........................................................................ATAAAGCTAGATTAACAAAGCAT............................... 23 1 5.00 0.00 4.00 1.00 ..........................................................................TAAGGCTAGATTACCAAAGCA................................ 21 1 5.00 0.00 0.00 5.00 .........................................................................ATAAAGCTACATTACCAAAGCAT............................... 23 1 5.00 3.00 1.00 1.00 ..........................................................................TAAAGCTTGATTACCAAAGCAT............................... 22 1 5.00 1.00 4.00 0.00 .........................................................................ATAGAGCTAGATTACCAAAGCAT............................... 23 1 5.00 2.00 0.00 3.00 ..........................................................................TAAAACTAGATTACCAAAGCAT............................... 22 1 5.00 0.00 3.00 2.00 .........................................................................ATAACGCTAGATTACCAAAGCAT............................... 23 1 5.00 2.00 0.00 3.00 .................................GCTTTGGCGCTTTAGCTGTATGAA...................................................................... 24 1 5.00 1.00 4.00 0.00 .........................................................................ATAAAGCTAAATTACCAAAGCAT............................... 23 1 5.00 0.00 2.00 3.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2R:4404406-4404531 -	89.91	ATGAGTGCCTT-AGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT ATAAGTGAATTGAGAGTGTAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTATACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGATCAATCATCAGA--CAAA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................................TAAAGCTAGATTACCAAAGCAT............................... 22 1 5488.00 462.00 752.00 1193.00 3078.00 3.00 ..........................................................................ATAAAGCTAGATTACCAAAGCAT............................... 23 1 3469.00 190.00 541.00 480.00 2253.00 5.00 ...........................................................................TAAAGCTAGATTACCAAAGCA................................ 21 1 166.00 11.00 34.00 12.00 108.00 1.00 ..........................................................................ATAAAGCTAGATTACCAAAGCA................................ 22 1 115.00 2.00 19.00 4.00 90.00 0.00 ............................................................................AAAGCTAGATTACCAAAGCAT............................... 21 1 106.00 5.00 22.00 17.00 62.00 0.00 ..................................GCTTTGGCGCTTTAGCTGTATG........................................................................ 22 1 100.00 76.00 9.00 4.00 11.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGC................................. 20 1 89.00 8.00 5.00 11.00 45.00 20.00 ..........................................................................ATAAAGCTAGATTACCAAAGCCT............................... 23 1 40.00 1.00 7.00 2.00 30.00 0.00 ...........................................................................TAAGGCTAGATTACCAAAGCAT............................... 22 1 39.00 1.00 7.00 4.00 27.00 0.00 ...........................................................................TAAAGCTAGATTACCACAGCAT............................... 22 1 39.00 1.00 3.00 0.00 35.00 0.00 ..........................................................................ATAAAGCTGGATTACCAAAGCAT............................... 23 1 39.00 0.00 5.00 1.00 33.00 0.00 ..........................................................................ATAAAGCTAGATTACCACAGCAT............................... 23 1 34.00 0.00 2.00 2.00 30.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGCCT............................... 22 1 30.00 0.00 2.00 1.00 27.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAAGC................................. 21 1 26.00 1.00 2.00 2.00 19.00 2.00 ..........................................................................ATAAAGCTAGATTACCAACGCAT............................... 23 1 25.00 0.00 2.00 0.00 23.00 0.00 ...........................................................................TAAAGCTAGATTACCAACGCAT............................... 22 1 23.00 1.00 0.00 0.00 22.00 0.00 ..........................................................................ATAAAGCTAGCTTACCAAAGCAT............................... 23 1 22.00 1.00 0.00 2.00 19.00 0.00 ...........................................................................TAAAGCTAGAGTACCAAAGCAT............................... 22 1 20.00 1.00 3.00 0.00 16.00 0.00 ...........................................................................TAAAGCTAGATTACCCAAGCAT............................... 22 1 19.00 1.00 6.00 0.00 12.00 0.00 ..........................................................................ATGAAGCTAGATTACCAAAGCAT............................... 23 1 17.00 0.00 3.00 0.00 14.00 0.00 ...........................................................................TAAAGCTAGATTACCAAATCAT............................... 22 1 17.00 0.00 3.00 0.00 14.00 0.00 ..................................GCTTTGGCGCTTTAGCTGTATGA....................................................................... 23 1 17.00 10.00 3.00 0.00 4.00 0.00 ...........................................................................TAAAGCTGGATTACCAAAGCAT............................... 22 1 17.00 0.00 2.00 2.00 13.00 0.00 ..........................................................................ATAAGGCTAGATTACCAAAGCAT............................... 23 1 16.00 1.00 1.00 1.00 13.00 0.00 ..........................................................................AGAAAGCTAGATTACCAAAGCAT............................... 23 1 16.00 0.00 4.00 0.00 12.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAG.................................. 19 1 15.00 0.00 2.00 0.00 13.00 0.00 ...........................................................................TAAAGCTAGATGACCAAAGCAT............................... 22 1 15.00 0.00 1.00 0.00 14.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGCTT............................... 22 1 14.00 0.00 1.00 0.00 13.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAAG.................................. 20 1 14.00 0.00 1.00 2.00 9.00 2.00 ..........................................................................ATAAAGCTAGATTACCAAATCAT............................... 23 1 14.00 0.00 0.00 0.00 14.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGCGT............................... 22 1 14.00 1.00 1.00 0.00 12.00 0.00 ...........................................................................TAAAGCTAGATTACCAAGGCAT............................... 22 1 14.00 2.00 0.00 0.00 12.00 0.00 ...........................................................................TGAAGCTAGATTACCAAAGCAT............................... 22 1 13.00 0.00 2.00 0.00 11.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGCATT.............................. 23 1 13.00 3.00 2.00 1.00 7.00 0.00 ...........................................................................TAGAGCTAGATTACCAAAGCAT............................... 22 1 13.00 2.00 1.00 2.00 8.00 0.00 ..........................................................................ATAAAGCTAGATTACCCAAGCAT............................... 23 1 12.00 1.00 1.00 0.00 10.00 0.00 ...........................................................................TAAAGCTAGCTTACCAAAGCAT............................... 22 1 12.00 2.00 0.00 0.00 10.00 0.00 ..........................................................................ATAAAGATAGATTACCAAAGCAT............................... 23 1 12.00 2.00 1.00 0.00 9.00 0.00 ............................................................................AAAGCTAGATTACCAAAGCATT.............................. 22 1 12.00 2.00 2.00 0.00 8.00 0.00 ...........................................................................TAAAGCTAGATTAACAAAGCAT............................... 22 1 11.00 0.00 2.00 0.00 9.00 0.00 ..........................................................................ATAAAGCTAGAGTACCAAAGCAT............................... 23 1 11.00 0.00 2.00 0.00 9.00 0.00 ..........................................................................ACAAAGCTAGATTACCAAAGCAT............................... 23 1 10.00 0.00 2.00 1.00 7.00 0.00 ...........................................................................TAAAGCTAGATTACCAGAGCAT............................... 22 1 10.00 0.00 2.00 3.00 5.00 0.00 ...........................................................................TAAAGCTAGATTACAAAAGCAT............................... 22 1 9.00 0.00 1.00 2.00 6.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAAGCTT............................... 23 1 9.00 0.00 0.00 1.00 8.00 0.00 ...........................................................................TAAAGCTAGATTACCGAAGCAT............................... 22 1 8.00 0.00 1.00 1.00 6.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAACCAT............................... 23 1 8.00 0.00 0.00 0.00 8.00 0.00 ...........................................................................TCAAGCTAGATTACCAAAGCAT............................... 22 1 8.00 2.00 0.00 0.00 6.00 0.00 ..........................................................................ATAAAGCTAGGTTACCAAAGCAT............................... 23 1 8.00 0.00 0.00 1.00 7.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAAGCATT.............................. 24 1 8.00 2.00 2.00 1.00 3.00 0.00 ...........................................................................TAAAGCTAGTTTACCAAAGCAT............................... 22 1 8.00 0.00 0.00 0.00 8.00 0.00 ..........................................................................ATACAGCTAGATTACCAAAGCAT............................... 23 1 7.00 0.00 1.00 0.00 6.00 0.00 ..........................................................................ATAAAACTAGATTACCAAAGCAT............................... 23 1 7.00 1.00 0.00 0.00 6.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAACAT............................... 22 1 7.00 0.00 2.00 1.00 4.00 0.00 ..........................................................................ATAAAGCTAGATTACAAAAGCAT............................... 23 1 7.00 1.00 1.00 0.00 5.00 0.00 ...........................................................................TAAAGCTAGATTCCCAAAGCAT............................... 22 1 7.00 0.00 0.00 0.00 7.00 0.00 ..........................................................................ATAAAGCTACATTACCAAAGCAT............................... 23 1 7.00 0.00 1.00 0.00 6.00 0.00 ...........................................................................TAAACCTAGATTACCAAAGCAT............................... 22 1 7.00 0.00 1.00 2.00 4.00 0.00 ..........................................................................ATAAAGCTAGATTACCAGAGCAT............................... 23 1 7.00 0.00 1.00 0.00 6.00 0.00 ..........................................................................ATCAAGCTAGATTACCAAAGCAT............................... 23 1 7.00 0.00 1.00 0.00 6.00 0.00 ...........................................................................TAAAGCTAGATTACCAATGCAT............................... 22 1 7.00 1.00 0.00 0.00 6.00 0.00 ...........................................................................TAAAGCTAGATTACCAAACCAT............................... 22 1 7.00 0.00 1.00 0.00 6.00 0.00 ...........................................................................TAAAGCTCGATTACCAAAGCAT............................... 22 1 7.00 0.00 1.00 0.00 6.00 0.00 ...........................................................................TATAGCTAGATTACCAAAGCAT............................... 22 1 6.00 1.00 1.00 0.00 4.00 0.00 ...........................................................................TAAATCTAGATTACCAAAGCAT............................... 22 1 6.00 0.00 1.00 4.00 1.00 0.00 ..........................................................................ATAAACCTAGATTACCAAAGCAT............................... 23 1 6.00 0.00 1.00 1.00 4.00 0.00 ..........................................................................ATAAAGCTAGATTGCCAAAGCAT............................... 23 1 6.00 0.00 3.00 0.00 3.00 0.00 ...........................................................................TAATGCTAGATTACCAAAGCAT............................... 22 1 6.00 0.00 0.00 0.00 6.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAAGCAC............................... 23 1 6.00 0.00 0.00 1.00 5.00 0.00 ...........................................................................TAAAACTAGATTACCAAAGCAT............................... 22 1 6.00 0.00 0.00 0.00 6.00 0.00 ...........................................................................TAAAGCTAGATCACCAAAGCAT............................... 22 1 6.00 0.00 2.00 1.00 3.00 0.00 ...........................................................................TAAAGCTAGGTTACCAAAGCAT............................... 22 1 6.00 2.00 2.00 0.00 2.00 0.00 ...........................................................................TAAAGATAGATTACCAAAGCAT............................... 22 1 6.00 0.00 0.00 0.00 6.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGCAC............................... 22 1 6.00 1.00 1.00 0.00 4.00 0.00 ...........................................................................TAAAGCTAGATTACTAAAGCAT............................... 22 1 6.00 0.00 1.00 0.00 5.00 0.00 ..................................GCTTTGGCGCTTTAGCTGTAT......................................................................... 21 1 6.00 0.00 1.00 0.00 4.00 1.00 ...........................................................................TAAAGCTAGATTACCATAGCAT............................... 22 1 6.00 0.00 0.00 0.00 6.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAAGCGT............................... 23 1 6.00 0.00 0.00 0.00 6.00 0.00 ..........................................................................ATAAAGCTAGATTCCCAAAGCAT............................... 23 1 6.00 0.00 0.00 0.00 6.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGTAT............................... 22 1 6.00 1.00 1.00 1.00 3.00 0.00 ...........................................................................TAAAGCTAGATTACCTAAGCAT............................... 22 1 5.00 1.00 0.00 0.00 4.00 0.00 ..........................................................................ATAAAGCTCGATTACCAAAGCAT............................... 23 1 5.00 0.00 0.00 0.00 5.00 0.00 ..........................................................................ATAAAGCTAGCTTACCAAAGCCT............................... 23 1 5.00 0.00 0.00 0.00 5.00 0.00 ...........................................................................TAACGCTAGATTACCAAAGCAT............................... 22 1 5.00 0.00 1.00 0.00 4.00 0.00 ...........................................................................TTAAGCTAGATTACCAAAGCAT............................... 22 1 5.00 1.00 0.00 0.00 4.00 0.00 ...........................................................................TAGAGCTGGATTACCAAAGCAT............................... 22 1 5.00 0.00 1.00 0.00 4.00 0.00 ..........................................................................ATAATGCTAGATTACCAAAGCAT............................... 23 1 5.00 0.00 1.00 0.00 4.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAGGCAT............................... 23 1 5.00 0.00 1.00 0.00 4.00 0.00 ..........................................................................ATAAAGCTAGATTACCAAAGTAT............................... 23 1 5.00 0.00 1.00 0.00 4.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGAAT............................... 22 1 5.00 0.00 0.00 0.00 5.00 0.00 ...........................................................................TAAAGCTAGATTATCAAAGCAT............................... 22 1 5.00 2.00 1.00 0.00 2.00 0.00 ..........................................................................ATAAAGCTAGTTTACCAAAGCAT............................... 23 1 5.00 0.00 0.00 0.00 5.00 0.00 ..........................................................................ATAAAGCTAGATCACCAAAGCAT............................... 23 1 5.00 1.00 0.00 0.00 4.00 0.00 ..........................................................................ATAAAGCTAGATTAACAAAGCAT............................... 23 1 5.00 0.00 1.00 0.00 4.00 0.00 ...........................................................................TAAAGCTAGATTACCAAAGCAG............................... 22 1 5.00 1.00 0.00 0.00 4.00 0.00 ..........................................................................ATAAATCTAGATTACCAAAGCAT............................... 23 1 4.00 1.00 0.00 1.00 2.00 0.00 ..........................................................................ATAAAGCTAGATTACTAAAGCAT............................... 23 1 4.00 1.00 1.00 0.00 2.00 0.00 ...........................................................................TAAAGCTAGATTGCCAAAGCAT............................... 22 1 4.00 0.00 1.00 1.00 2.00 0.00 ...........................................................................TAAAGCTAGATTACCACCGCAT............................... 22 1 4.00 0.00 0.00 0.00 4.00 0.00 ..........................................................................ATAAAGCTAGATGACCAAAGCAT............................... 23 1 4.00 2.00 0.00 0.00 2.00 0.00 ...........................................................................TAAAGCGAGATTACCAAAGCAT............................... 22 1 4.00 0.00 0.00 0.00 4.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4845:19768185-19768311 +	92.23	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT ATAAGTGACTTAGAGTGCAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGATCAATCTTCAGAAAGAAA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..........................................................................TAAAGCTAGATTACCAAAGCAT............................... 22 1 4285.00 273.00 376.00 0.00 3636.00 .........................................................................ATAAAGCTAGATTACCAAAGCAT............................... 23 1 3102.00 119.00 230.00 0.00 2753.00 .................................GCTTTGGCGCTTTAGCTGTATG........................................................................ 22 1 256.00 30.00 12.00 0.00 214.00 ..........................................................................TAAAGCTAGATTACCAAAGC................................. 20 1 243.00 5.00 12.00 0.00 226.00 ..........................................................................TAAAGCTAGATTACCAAAGCA................................ 21 1 239.00 5.00 29.00 0.00 205.00 .........................................................................ATAAAGCTAGATTACCAAAGCA................................ 22 1 164.00 1.00 17.00 0.00 146.00 .........................................................................ATAAAGCTAGATTACCAAAGC................................. 21 1 100.00 1.00 9.00 0.00 90.00 .........................................................................ATAAAGCTAGATTACCAAAG.................................. 20 1 97.00 0.00 1.00 0.00 96.00 ..........................................................................TAAAGCTAGATTACCAAAG.................................. 19 1 91.00 0.00 3.00 0.00 88.00 ...........................................................................AAAGCTAGATTACCAAAGCAT............................... 21 1 60.00 1.00 4.00 0.00 55.00 ..........................................................................TAAAGCTAGATTACCAAATCAT............................... 22 1 42.00 3.00 1.00 0.00 38.00 .........................................................................ATAAAGCTAGATTACCAAAGCAC............................... 23 1 38.00 0.00 0.00 0.00 38.00 .................................GCTTTGGCGCTTTAGCTGTATGA....................................................................... 23 1 37.00 5.00 8.00 0.00 24.00 ..........................................................................TAAATCTAGATTACCAAAGCAT............................... 22 1 36.00 0.00 0.00 0.00 36.00 ..........................................................................TAAAGCTATATTACCAAAGCAT............................... 22 1 32.00 2.00 0.00 0.00 30.00 .........................................................................ATAAAGCTAGATTACCAAAGCAA............................... 23 1 32.00 0.00 0.00 0.00 32.00 .........................................................................ATAAAGCTAGATTACCAAATCAT............................... 23 1 31.00 0.00 2.00 0.00 29.00 .........................................................................ATAAAGCTAGATTACAAAAGCAT............................... 23 1 27.00 0.00 4.00 0.00 23.00 .........................................................................ATAAATCTAGATTACCAAAGCAT............................... 23 1 25.00 0.00 0.00 0.00 25.00 ..........................................................................TAAAGATAGATTACCAAAGCAT............................... 22 1 21.00 0.00 1.00 0.00 20.00 ..........................................................................TAAAGCTAGATTACAAAAGCAT............................... 22 1 20.00 1.00 2.00 0.00 17.00 ..........................................................................TAAGGCTAGATTACCAAAGCAT............................... 22 1 19.00 0.00 2.00 0.00 17.00 .........................................................................ATAAAGCTAGATTACCAAAGCAG............................... 23 1 19.00 0.00 0.00 0.00 19.00 .........................................................................ATAAAGCTATATTACCAAAGCAT............................... 23 1 19.00 1.00 0.00 0.00 18.00 .........................................................................ATAAAGATAGATTACCAAAGCAT............................... 23 1 16.00 0.00 1.00 0.00 15.00 ..........................................................................TAAAGCTAGATTACCAAAGAAT............................... 22 1 11.00 0.00 2.00 0.00 9.00 ...........................................................................AAAGCTAGATTACCAAAGCATT.............................. 22 1 11.00 0.00 0.00 0.00 11.00 ..........................................................................TAAAGCTAGATTACCAAAGTAT............................... 22 1 10.00 1.00 0.00 0.00 9.00 .........................................................................ATAAAGCTGGATTACCAAAGCAT............................... 23 1 10.00 0.00 2.00 0.00 8.00 .........................................................................ATAAAGCTAGATTACCAAAGAAT............................... 23 1 10.00 0.00 1.00 0.00 9.00 ..........................................................................TAAACCTAGATTACCAAAGCAT............................... 22 1 8.00 1.00 0.00 0.00 7.00 .........................................................................ATAAAGCTAGATTACCAAA................................... 19 1 8.00 0.00 0.00 0.00 8.00 ..........................................................................TAAAGCTAGATTACCAAGGCAT............................... 22 1 8.00 0.00 3.00 0.00 5.00 ..........................................................................TAAAGCTAGATTACCAAAGCATT.............................. 23 1 8.00 0.00 0.00 0.00 8.00 ..........................................................................TAAAGCTAGATTATCAAAGCAT............................... 22 1 8.00 1.00 0.00 0.00 7.00 .........................................................................ATAAAGCTAGATTACCCAAGCAT............................... 23 1 7.00 1.00 1.00 0.00 5.00 ..........................................................................TAAAACTAGATTACCAAAGCAT............................... 22 1 7.00 3.00 1.00 0.00 3.00 ..........................................................................TAAAGCTAGCTTACCAAAGCAT............................... 22 1 7.00 2.00 1.00 0.00 4.00 ..........................................................................TAAAGCTAGATTACCAAAGCCT............................... 22 1 7.00 0.00 4.00 0.00 3.00 ..........................................................................TAGAGCTAGATTACCAAAGCAT............................... 22 1 7.00 0.00 1.00 0.00 6.00 ..........................................................................TAAAGCTAGATTAACAAAGCAT............................... 22 1 6.00 0.00 0.00 0.00 6.00 .........................................................................ATGAAGCTAGATTACCAAAGCAT............................... 23 1 6.00 0.00 0.00 0.00 6.00 ..........................................................................TAAAGCTAGACTACCAAAGCAT............................... 22 1 6.00 2.00 0.00 0.00 4.00 .........................................................................ATAAACCTAGATTACCAAAGCAT............................... 23 1 6.00 0.00 0.00 0.00 6.00 .................................GCTTTGGCGCTTTAGCTGTATT........................................................................ 22 1 6.00 6.00 0.00 0.00 0.00 ..........................................................................TAAAGCTGGATTACCAAAGCAT............................... 22 1 6.00 0.00 1.00 0.00 5.00 ..........................................................................TAAAGCTAGATTACCAAACCAT............................... 22 1 6.00 0.00 1.00 0.00 5.00 ..........................................................................TACAGCTAGATTACCAAAGCAT............................... 22 1 6.00 0.00 0.00 0.00 6.00 ...........................................................................TAAACTAGATTACCAAAGCAT............................... 21 1 6.00 0.00 0.00 0.00 6.00 .........................................................................ATAAAGCTAGATTACCAAACCAT............................... 23 1 6.00 0.00 1.00 0.00 5.00 .................................GCTTTGGCGCTTTAGCTGTAT......................................................................... 21 1 6.00 1.00 1.00 0.00 4.00 ..........................................................................TAAAGCTAGATTACTAAAGCAT............................... 22 1 5.00 0.00 0.00 0.00 5.00 .........................................................................ATCAAGCTAGATTACCAAAGCAT............................... 23 1 5.00 1.00 0.00 0.00 4.00 ..........................................................................TAAAGCTAGATTACCAAAGCT................................ 21 1 5.00 0.00 0.00 0.00 5.00 .........................................................................ATAAAGCTAGATCACCAAAGCAT............................... 23 1 5.00 0.00 0.00 0.00 5.00 .........................................................................ATAGAGCTAGATTACCAAAGCAT............................... 23 1 5.00 0.00 0.00 0.00 5.00 .........................................................................ATAAAGCTAGATTACCAAAGCCT............................... 23 1 5.00 1.00 2.00 0.00 2.00 ..........................................................................ATAAGCTAGATTACCAAAGCAT............................... 22 1 4.00 0.00 0.00 0.00 4.00 ..........................................................................TAAAGCTAGATTACCCAAGCAT............................... 22 1 4.00 1.00 1.00 0.00 2.00 .........................................................................ATAAAGCTAGATTACCAACGCAT............................... 23 1 4.00 0.00 2.00 0.00 2.00 .........................................................................ATAAAGTTAGATTACCAAAGCAT............................... 23 1 4.00 0.00 0.00 0.00 4.00 .........................................................................ATAACGCTAGATTACCAAAGCAT............................... 23 1 4.00 0.00 0.00 0.00 4.00 .........................................................................ATAAGGCTAGATTACCAAAGCAT............................... 23 1 4.00 0.00 1.00 0.00 3.00 .........................................................................ATAAAGCTAGATTACCAAAACAT............................... 23 1 4.00 1.00 0.00 0.00 3.00 .........................................................................ATAAAGCTAGATTACCACAGCAT............................... 23 1 4.00 2.00 2.00 0.00 0.00 ..........................................................................TAAAGCTAGATTACCACAGCAT............................... 22 1 4.00 0.00 3.00 0.00 1.00 .........................................................................ATAAAGCCAGATTACCAAAGCAT............................... 23 1 4.00 0.00 1.00 0.00 3.00 .........................................................................ATAAAGCTAGATTACCAAAGCATT.............................. 24 1 4.00 1.00 1.00 0.00 2.00 ..........................................................................TAAAGCTACATTACCAAAGCAT............................... 22 1 4.00 2.00 0.00 0.00 2.00 ..........................................................................TAAAGCTAGATTGCCAAAGCAT............................... 22 1 4.00 2.00 0.00 0.00 2.00 ..........................................................................TAAAGCTAGATTACCGAAGCAT............................... 22 1 4.00 0.00 0.00 0.00 4.00 ..........................................................................TAAAGTTAGATTACCAAAGCAT............................... 22 1 4.00 0.00 0.00 0.00 4.00 ..........................................................................TAAAGCTAGATTACCAAAGCAA............................... 22 1 4.00 1.00 1.00 0.00 2.00 ..........................................................................AAAAGCTAGATTACCAAAGCAT............................... 22 1 3.00 0.00 0.00 0.00 3.00 ..............................................................................GCTAGATTACCAAAGCAT............................... 18 1 3.00 0.00 0.00 0.00 3.00 ..........................................................................TAAAGCTAGATTACCAAAACAT............................... 22 1 3.00 1.00 0.00 0.00 2.00 ..........................................................................TAAAGCTCGATTACCAAAGCAT............................... 22 1 3.00 0.00 0.00 0.00 3.00 .........................................................................ACAAAGCTAGATTACCAAAGCAT............................... 23 1 3.00 0.00 0.00 0.00 3.00 .................................GCTTTGGCGCTTTAGCTTTATG........................................................................ 22 1 3.00 3.00 0.00 0.00 0.00 .................................GCTTTTGCGCTTTAGCTGTATG........................................................................ 22 1 3.00 1.00 0.00 0.00 2.00 ..........................................................................TAAAGCTAGATTACCAAAGCAC............................... 22 1 3.00 1.00 0.00 0.00 2.00 .........................................................................ATAAAGCTGGATTACCAAAGCA................................ 22 1 3.00 0.00 0.00 0.00 3.00 .........................................................................ATAAAGCTAGATTACCAAAGTAT............................... 23 1 3.00 0.00 1.00 0.00 2.00 ..........................................................................TCAAGCTAGATTACCAAAGCAT............................... 22 1 3.00 0.00 0.00 0.00 3.00 .................................GCTTTGGCGCTTTATCTGTATG........................................................................ 22 1 3.00 1.00 0.00 0.00 2.00 ..........................................................................TAAAGCxAGATTACCAAAGCAT............................... 21 1 3.00 0.00 0.00 0.00 3.00 ..........................................................................TAAAGCTAGATTACCAAAGCGT............................... 22 1 3.00 0.00 2.00 0.00 1.00 ..........................................................................TAAAGCTAGATCACCAAAGCAT............................... 22 1 3.00 1.00 0.00 0.00 2.00 .........................................................................ATTAAGCTAGATTACCAAAGCAT............................... 23 1 3.00 0.00 0.00 0.00 3.00 .........................................................................ATAAAGCTAGATTACCAAAxCAT............................... 22 1 3.00 0.00 0.00 0.00 3.00 .........................................................................ATAAAGCTAGATTATCAAAGCAT............................... 23 1 3.00 0.00 0.00 0.00 3.00 ...........................................................................TAAGCTAGATTACCAAAGCAT............................... 21 1 3.00 0.00 0.00 0.00 3.00 ..........................................................................TAAAGCTAGATTACCAAAxCAT............................... 21 1 3.00 0.00 0.00 0.00 3.00 .........................................................................ATAAAGCTAGGTTACCAAAGCAT............................... 23 1 3.00 0.00 0.00 0.00 3.00 .........................................................................ATAAAGCTAGATTACCGAAGCAT............................... 23 1 3.00 0.00 0.00 0.00 3.00 .........................................................................ATAAAGCTAGATTGCCAAAGCAT............................... 23 1 3.00 0.00 0.00 0.00 3.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000454078:624198-624325 +	80.11	ATGAGTGCCTT-AGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT ACCAGTGCTAAAAGAAATAACCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTGTGCAGATTAACCATCAAATAGACC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000408961:272475-272601 +	82.93	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT ACAAGTGATTAAAAGAGAAACTGCTCTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTTGGTAGATCAATCATCAAAAATAAC Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000301468:858148-858274 +	84.48	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT CTATGTTTTTGAAAAGGAAGCTGCCTTGCCGCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGATCAATCATCAGTTACAAC Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415914:422792-422916 +	81.89	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT AGAAGTGATTTAAG--GCAGCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTTGGCAGATCAATCAACGAATATATC Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000490579:645389-645516 -	81.63	ATGAGTGCCTT-AGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT AAAAGTGTTTAAAGAATGTGGCTGCTTGACCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTTTGCAGATCAATCATCCAAAATAAG Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000768553:9525-9660 +	72.99	ATGAGTGCCTTAG---------AGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT ATATGTGAACTAGTTTTTAAATAAAGTAGCTGCCTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTTTGCAGATCAATCATCAAGTTTAAC Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302382:529487-529610 +	72.51	ATGAGTGCCTTAGAGTGA--AGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAG-GTCAATCGTCAGAAAC----AAT GT----TTTTTGGACTGCTCTTCTGAC--------GCTTTGGCGCTTTAGCTGTATGATAGATTTTTACTACTTCATAAAGCTAGATTACCAAAGCATTGGCGGTCTGCAGGGTAAATCATCATAAATACAAAAT Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_12916:15864702-15864823 -	76.25	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCA-GAAACAAT TATAGTGTTCTATA-----GCTGCTTAACCGATGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCCGCAGGCCTGTCTTCAAGGAATAAA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..........................................................................TAAAGCTAGATTACCAAAGCAT................................ 22 1 7088.00 1569.00 2318.00 2392.00 809.00 .........................................................................ATAAAGCTAGATTACCAAAGCAT................................ 23 1 3716.00 506.00 1619.00 1229.00 362.00 .................................GCTTTGGCGCTTTAGCTGTATG......................................................................... 22 1 266.00 1.00 250.00 8.00 7.00 ..........................................................................TAAAGCTAGATTACCAAAGC.................................. 20 1 205.00 9.00 146.00 29.00 21.00 ..........................................................................TAAAGCTAGATTACCAAAGCA................................. 21 1 150.00 11.00 62.00 65.00 12.00 .........................................................................ATAAAGCTAGATTACCAAAG................................... 20 1 148.00 6.00 129.00 9.00 4.00 .........................................................................ATAAAGCTAGATTACCAAAGCA................................. 22 1 95.00 8.00 45.00 37.00 5.00 ..........................................................................TAAAGCTAGATTACCAAAG................................... 19 1 92.00 1.00 79.00 4.00 8.00 ...........................................................................AAAGCTAGATTACCAAAGCAT................................ 21 1 89.00 10.00 37.00 36.00 6.00 .........................................................................ATAAAGCTGGATTACCAAAGCAT................................ 23 1 55.00 1.00 27.00 27.00 0.00 ..........................................................................TAAAGATAGATTACCAAAGCAT................................ 22 1 49.00 9.00 27.00 13.00 0.00 ..........................................................................TAAAGCTAGATTACCAAATCAT................................ 22 1 47.00 7.00 22.00 11.00 7.00 .................................GCTTTGGCGCTTTAGCTGTATGA........................................................................ 23 1 41.00 1.00 34.00 5.00 1.00 ..........................................................................TAAAGCTAGATTACCAAAGCATT............................... 23 1 40.00 6.00 16.00 12.00 6.00 ..........................................................................TAAATCTAGATTACCAAAGCAT................................ 22 1 35.00 9.00 20.00 2.00 4.00 ..........................................................................TAAAGCTGGATTACCAAAGCAT................................ 22 1 34.00 5.00 12.00 17.00 0.00 .........................................................................ATAAAGCTAGATTACCAAAGC.................................. 21 1 32.00 2.00 18.00 9.00 3.00 ...........................................................................AAAGCTAGATTACCAAAGCATT............................... 22 1 30.00 0.00 12.00 16.00 2.00 ..........................................................................TAAAGCTAGATTACCAAAGCCT................................ 22 1 28.00 10.00 3.00 8.00 7.00 .........................................................................ATAAAGCTAGATTACCAAAGCATT............................... 24 1 28.00 6.00 14.00 7.00 1.00 ..........................................................................TAAAGCTAGATTACCAAAGCGT................................ 22 1 28.00 15.00 4.00 7.00 2.00 .........................................................................ATAAAGATAGATTACCAAAGCAT................................ 23 1 28.00 2.00 21.00 5.00 0.00 ..........................................................................TAAAGCTAGATTACAAAAGCAT................................ 22 1 26.00 4.00 6.00 16.00 0.00 ..........................................................................TAAAGCTAGATTACCAAAGAAT................................ 22 1 25.00 7.00 16.00 1.00 1.00 .........................................................................ATAAAGCTAGATTACCAAATCAT................................ 23 1 25.00 0.00 16.00 6.00 3.00 ..........................................................................TAAAGCTAGATTACCACAGCAT................................ 22 1 23.00 0.00 1.00 14.00 8.00 .........................................................................ATAAATCTAGATTACCAAAGCAT................................ 23 1 22.00 4.00 18.00 0.00 0.00 ..........................................................................TAAAGCTAGATTACCAAAGCTT................................ 22 1 22.00 5.00 3.00 13.00 1.00 .........................................................................ATAAAGCTAGATTACCAAAGAAT................................ 23 1 22.00 7.00 13.00 2.00 0.00 ..........................................................................TAAAGCTAGATGACCAAAGCAT................................ 22 1 20.00 11.00 0.00 9.00 0.00 ..........................................................................TAAGGCTAGATTACCAAAGCAT................................ 22 1 18.00 1.00 5.00 10.00 2.00 .........................................................................ATAAAGCTAGATTACCAAAGTAT................................ 23 1 17.00 8.00 6.00 3.00 0.00 ..........................................................................TAAAGCTAGATCACCAAAGCAT................................ 22 1 17.00 7.00 2.00 5.00 3.00 .........................................................................ATAAAGCTAGATTACAAAAGCAT................................ 23 1 16.00 2.00 2.00 10.00 2.00 ..........................................................................TAAAGCTAGATTACCAAACCAT................................ 22 1 16.00 2.00 5.00 6.00 3.00 ..........................................................................TAAAGCGAGATTACCAAAGCAT................................ 22 1 16.00 0.00 0.00 14.00 2.00 ..........................................................................TAAAGCTAGAGTACCAAAGCAT................................ 22 1 15.00 4.00 0.00 11.00 0.00 ..........................................................................TAAAGCTAGATTACCAAAGTAT................................ 22 1 14.00 1.00 6.00 6.00 1.00 .........................................................................ATAAAGCTAGATTACCAAAGCCT................................ 23 1 14.00 0.00 2.00 9.00 3.00 .........................................................................ATAAAGCTATATTACCAAAGCAT................................ 23 1 14.00 3.00 8.00 2.00 1.00 ..........................................................................CAAAGCTAGATTACCAAAGCAT................................ 22 1 14.00 1.00 2.00 9.00 2.00 .........................................................................ATAAAGCTAGATTACCAACGCAT................................ 23 1 13.00 0.00 0.00 13.00 0.00 ..........................................................................TGAAGCTAGATTACCAAAGCAT................................ 22 1 13.00 4.00 2.00 4.00 3.00 .........................................................................ATGAAGCTAGATTACCAAAGCAT................................ 23 1 12.00 0.00 6.00 6.00 0.00 ..........................................................................TAAAGCTATATTACCAAAGCAT................................ 22 1 12.00 1.00 3.00 4.00 4.00 ..........................................................................GAAAGCTAGATTACCAAAGCAT................................ 22 1 12.00 1.00 0.00 11.00 0.00 ..........................................................................TAAAGCTAGATTACCGAAGCAT................................ 22 1 12.00 4.00 3.00 5.00 0.00 ..........................................................................TAGAGCTAGATTACCAAAGCAT................................ 22 1 12.00 0.00 6.00 5.00 1.00 .........................................................................AGAAAGCTAGATTACCAAAGCAT................................ 23 1 12.00 3.00 0.00 9.00 0.00 ..........................................................................TAAAGCTAGATTACCAACGCAT................................ 22 1 11.00 0.00 0.00 9.00 2.00 ..........................................................................TAAAGCTAGATTACCAAAGCAC................................ 22 1 11.00 3.00 1.00 7.00 0.00 ..........................................................................TAAAGCCAGATTACCAAAGCAT................................ 22 1 10.00 1.00 3.00 5.00 1.00 .........................................................................ATAAAGCTAGAGTACCAAAGCAT................................ 23 1 10.00 1.00 1.00 7.00 1.00 .........................................................................ATAAAGCTAGATTACCAAACCAT................................ 23 1 10.00 0.00 0.00 6.00 4.00 ..........................................................................TAAAGCTAGATTACTAAAGCAT................................ 22 1 9.00 0.00 2.00 6.00 1.00 .........................................................................ATAAAGCTAGATTACCAGAGCAT................................ 23 1 9.00 2.00 1.00 6.00 0.00 ..........................................................................TAAAGCTAGATTACCAAGGCAT................................ 22 1 9.00 2.00 1.00 5.00 1.00 ..........................................................................TAAAGCTAGATTACCCAAGCAT................................ 22 1 9.00 2.00 0.00 1.00 6.00 ..........................................................................AAAAGCTAGATTACCAAAGCAT................................ 22 1 8.00 3.00 2.00 1.00 2.00 .........................................................................ATAAGGCTAGATTACCAAAGCAT................................ 23 1 8.00 0.00 4.00 3.00 1.00 ..........................................................................TAAACCTAGATTACCAAAGCAT................................ 22 1 8.00 0.00 6.00 0.00 2.00 .........................................................................ATAAAGCTAGATTACCGAAGCAT................................ 23 1 8.00 1.00 4.00 3.00 0.00 ..........................................................................TAAAGCTAGACTACCAAAGCAT................................ 22 1 8.00 4.00 1.00 2.00 1.00 .........................................................................GTAAAGCTAGATTACCAAAGCAT................................ 23 1 8.00 1.00 5.00 1.00 1.00 ..........................................................................TAAAGCTAGATTATCAAAGCAT................................ 22 1 8.00 0.00 2.00 5.00 1.00 ..........................................................................TAAAGCTAGATTACCAGAGCAT................................ 22 1 8.00 0.00 1.00 7.00 0.00 ..........................................................................TAAAGCTAGATTCCCAAAGCAT................................ 22 1 8.00 4.00 0.00 3.00 1.00 ..........................................................................TTAAGCTAGATTACCAAAGCAT................................ 22 1 8.00 1.00 0.00 5.00 2.00 ..........................................................................TAAAGCTAGATTAACAAAGCAT................................ 22 1 8.00 1.00 1.00 5.00 1.00 ..........................................................................TAACGCTAGATTACCAAAGCAT................................ 22 1 8.00 1.00 0.00 5.00 2.00 ..........................................................................TAAAACTAGATTACCAAAGCAT................................ 22 1 8.00 1.00 1.00 2.00 4.00 ..........................................................................TAAAGCTAGATTACCAAAACAT................................ 22 1 8.00 0.00 1.00 4.00 3.00 ..........................................................................TAAAGCTAGATTACCTAAGCAT................................ 22 1 7.00 2.00 1.00 3.00 1.00 ..........................................................................TAAAGCTAGATTACCAAAGCAG................................ 22 1 7.00 0.00 0.00 6.00 1.00 .........................................................................ATAAAGCTAGATTACCAAAGCGT................................ 23 1 7.00 0.00 2.00 5.00 0.00 .........................................................................ATAAAGCTAGATTACCAAAGGAT................................ 23 1 7.00 2.00 4.00 1.00 0.00 .........................................................................ATAAAGCTAGATTACCAAA.................................... 19 1 7.00 0.00 4.00 3.00 0.00 .........................................................................ATAGAGCTAGATTACCAAAGCAT................................ 23 1 7.00 0.00 3.00 3.00 1.00 ..........................................................................TAAAGTTAGATTACCAAAGCAT................................ 22 1 7.00 1.00 4.00 2.00 0.00 .........................................................................ATAAACCTAGATTACCAAAGCAT................................ 23 1 7.00 2.00 2.00 2.00 1.00 ..........................................................................TAAAGCTACATTACCAAAGCAT................................ 22 1 7.00 1.00 0.00 1.00 5.00 .........................................................................ATAAAGATAGATTACCAAAGAAT................................ 23 1 7.00 0.00 7.00 0.00 0.00 .........................................................................ATAAAGCTAGATTACTAAAGCAT................................ 23 1 6.00 2.00 3.00 1.00 0.00 ..........................................................................TAAAGCTAGATTGCCAAAGCAT................................ 22 1 6.00 1.00 2.00 2.00 1.00 .........................................................................ATAAAGCTAGATTACCATAGCAT................................ 23 1 6.00 2.00 0.00 4.00 0.00 ..........................................................................TAAAGCTGGATTACCAAAGC.................................. 20 1 6.00 0.00 6.00 0.00 0.00 .........................................................................ATAAAGCTAGATTACCACAGCAT................................ 23 1 6.00 0.00 0.00 4.00 2.00 .........................................................................ATAAAGCTAGATTACCAAGGCAT................................ 23 1 6.00 1.00 2.00 3.00 0.00 .........................................................................ATAACGCTAGATTACCAAAGCAT................................ 23 1 6.00 0.00 1.00 4.00 1.00 ..........................................................................TAAAGCTAGATTAGCAAAGCAT................................ 22 1 6.00 2.00 0.00 4.00 0.00 ..........................................................................TAATGCTAGATTACCAAAGCAT................................ 22 1 6.00 0.00 0.00 6.00 0.00 .........................................................................ATAAAGCTAGCTTACCAAAGCAT................................ 23 1 6.00 1.00 0.00 4.00 1.00 .........................................................................ATAAAGCTAGATTACCAAAGCAC................................ 23 1 6.00 1.00 3.00 2.00 0.00 ...................................TTTGGCGCTTTAGCTGTATG......................................................................... 20 1 6.00 1.00 4.00 1.00 0.00 ..........................................................................TAAAGGTAGATTACCAAAGCAT................................ 22 1 5.00 0.00 0.00 5.00 0.00 .........................................................................ATAAAGTTAGATTACCAAAGCAT................................ 23 1 5.00 2.00 1.00 2.00 0.00 .........................................................................ATAAAGCGAGATTACCAAAGCAT................................ 23 1 5.00 0.00 0.00 3.00 2.00 .........................................................................ATAAAGCTAGATTGCCAAAGCAT................................ 23 1 5.00 1.00 3.00 1.00 0.00 .........................................................................ATAAAGCTACATTACCAAAGCAT................................ 23 1 5.00 0.00 0.00 3.00 2.00 .........................................................................ATAAAGCTGGATTACCAAAGCA................................. 22 1 5.00 0.00 4.00 1.00 0.00 .........................................................................ATAAAGCTAGACTACCAAAGCAT................................ 23 1 5.00 0.00 0.00 4.00 1.00

droBip1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000396717:103442-103546 -	58.31	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT AT------------------CTGTTCTACCTGTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATGGGTTTTCGCAGGTTAATCTTCATTAA---- Size Hit Count Total Norm
1	scf7180000396006:6519-6549 -	12.8	ATGAGTGCCTTAGAGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT ------------------------------------------------------------------------------------------------TGATTACAGTTTGGCAGTCGCATTCAATAAT Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr4_group3:8443957-8444103 +	56.5	ATGAGTGCCTTAGAGTGAAGC----------------------TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT GAAAGTGTTTAAAAGTACAACAATCTAATCTGTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-CTGTGGAAACTTCATCC-AAACAAT Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ................................................................................................TAAAGCTAGATTACCAAAGCAT............................... 22 1 4813.00 1265.00 1475.00 2073.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCAT............................... 23 1 2525.00 534.00 707.00 1284.00 0.00 .......................................................GCTTTGGCGCTTTAGCTGTATG........................................................................ 22 1 194.00 1.00 161.00 32.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCA................................ 21 1 129.00 19.00 17.00 93.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCA................................ 22 1 85.00 11.00 14.00 60.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGC................................. 20 1 68.00 18.00 12.00 37.00 1.00 .................................................................................................AAAGCTAGATTACCAAAGCAT............................... 21 1 52.00 17.00 9.00 26.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGC................................. 21 1 39.00 4.00 8.00 27.00 0.00 .......................................................GCTTTGGCGCTTTAGCTGTATGA....................................................................... 23 1 29.00 0.00 18.00 11.00 0.00 ................................................................................................TAAAGCTGGATTACCAAAGCAT............................... 22 1 19.00 1.00 1.00 17.00 0.00 ................................................................................................TAAAGCTAGATTACCACAGCAT............................... 22 1 18.00 1.00 6.00 11.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCATT.............................. 23 1 18.00 6.00 2.00 10.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAG.................................. 20 1 18.00 3.00 11.00 4.00 0.00 ...............................................................................................ATAAAGCTGGATTACCAAAGCAT............................... 23 1 16.00 1.00 3.00 12.00 0.00 ................................................................................................TAGAGCTAGATTACCAAAGCAT............................... 22 1 14.00 3.00 2.00 9.00 0.00 ................................................................................................TAAAGCTAGATTACCCAAGCAT............................... 22 1 12.00 1.00 9.00 2.00 0.00 ...............................................................................................ATAAAGATAGATTACCAAAGCAT............................... 23 1 11.00 0.00 7.00 4.00 0.00 ................................................................................................TACAGCTAGATTACCAAAGCAT............................... 22 1 11.00 1.00 1.00 9.00 0.00 ................................................................................................TAAAGCTAGATTATCAAAGCAT............................... 22 1 11.00 0.00 7.00 4.00 0.00 ................................................................................................TAAAGCTAGATTAACAAAGCAT............................... 22 1 11.00 1.00 5.00 5.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCGT............................... 22 1 11.00 2.00 2.00 7.00 0.00 ................................................................................................TAAGGCTAGATTACCAAAGCAT............................... 22 1 10.00 3.00 3.00 4.00 0.00 ...............................................................................................ATAAAGCTAGATTACCACAGCAT............................... 23 1 9.00 1.00 3.00 5.00 0.00 ................................................................................................TAAAACTAGATTACCAAAGCAT............................... 22 1 9.00 1.00 4.00 4.00 0.00 ................................................................................................TAAAGCTAGATTACCAACGCAT............................... 22 1 8.00 0.00 5.00 3.00 0.00 ................................................................................................TAAAGCTAGATGACCAAAGCAT............................... 22 1 8.00 0.00 2.00 6.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCCT............................... 22 1 8.00 1.00 3.00 4.00 0.00 ...............................................................................................ATAAAGCTAGATTACCCAAGCAT............................... 23 1 8.00 2.00 3.00 3.00 0.00 ................................................................................................TGAAGCTAGATTACCAAAGCAT............................... 22 1 8.00 1.00 4.00 3.00 0.00 ................................................................................................TAAAGCTAGACTACCAAAGCAT............................... 22 1 8.00 1.00 4.00 3.00 0.00 ................................................................................................TAAAGCTAGATTACCAAACCAT............................... 22 1 8.00 1.00 1.00 6.00 0.00 ................................................................................................TAAAGCTAGATTACCGAAGCAT............................... 22 1 7.00 2.00 3.00 2.00 0.00 ................................................................................................TAAAGCTAGATTACAAAAGCAT............................... 22 1 7.00 1.00 2.00 4.00 0.00 ...............................................................................................ATAAAGCTAGATTACCATAGCAT............................... 23 1 7.00 0.00 2.00 5.00 0.00 ...............................................................................................ATACAGCTAGATTACCAAAGCAT............................... 23 1 7.00 0.00 2.00 5.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCCT............................... 23 1 7.00 3.00 2.00 2.00 0.00 ................................................................................................TAAAGATAGATTACCAAAGCAT............................... 22 1 7.00 0.00 3.00 4.00 0.00 ...............................................................................................ATAAAGCTAGATTACAAAAGCAT............................... 23 1 7.00 0.00 4.00 3.00 0.00 ...............................................................................................ATAAAGCTAGAGTACCAAAGCAT............................... 23 1 6.00 0.00 3.00 3.00 0.00 ...............................................................................................ATAAAGCTAGACTACCAAAGCAT............................... 23 1 6.00 1.00 1.00 4.00 0.00 ................................................................................................TAAAGCTAGATTACCxAAGCAT............................... 21 1 6.00 4.00 0.00 2.00 0.00 ................................................................................................TAAAGCCAGATTACCAAAGCAT............................... 22 1 6.00 1.00 3.00 2.00 0.00 ................................................................................................TAAAGCTCGATTACCAAAGCAT............................... 22 1 6.00 1.00 2.00 3.00 0.00 ................................................................................................TAAAGCTAGATTACTAAAGCAT............................... 22 1 6.00 1.00 3.00 2.00 0.00 ................................................................................................TAAACCTAGATTACCAAAGCAT............................... 22 1 6.00 3.00 0.00 3.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCAC............................... 23 1 6.00 0.00 0.00 6.00 0.00 ...............................................................................................ATAAAGCTAGATTAACAAAGCAT............................... 23 1 6.00 0.00 2.00 4.00 0.00 ................................................................................................TAAAGCTAGATTACCTAAGCAT............................... 22 1 5.00 1.00 3.00 1.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCTT............................... 22 1 5.00 0.00 1.00 4.00 0.00 ...............................................................................................ATAAAGCTAGATTACCGAAGCAT............................... 23 1 5.00 1.00 2.00 2.00 0.00 ................................................................................................TAAATCTAGATTACCAAAGCAT............................... 22 1 5.00 3.00 0.00 2.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCTT............................... 23 1 5.00 0.00 3.00 2.00 0.00 ................................................................................................TAACGCTAGATTACCAAAGCAT............................... 22 1 5.00 0.00 0.00 5.00 0.00 ...............................................................................................ATAAAGCTAGATTACTAAAGCAT............................... 23 1 5.00 0.00 4.00 1.00 0.00 ................................................................................................TAAAGCTAGTTTACCAAAGCAT............................... 22 1 5.00 0.00 5.00 0.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAACCAT............................... 23 1 5.00 0.00 3.00 2.00 0.00 ................................................................................................TAAAGCTAGATTACCAAGGCAT............................... 22 1 4.00 0.00 1.00 3.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGT................................. 21 2 2.00 1.50 0.00 0.50 0.00 ...............................................................................................ATAAAGCTAGATTACCAAA................................... 19 1 4.00 0.00 1.00 3.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGTAT............................... 22 1 4.00 0.00 2.00 2.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCAG............................... 22 1 4.00 0.00 1.00 3.00 0.00 ...............................................................................................ATAAAGCTAGGTTACCAAAGCAT............................... 23 1 4.00 1.00 1.00 2.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAACAT............................... 22 1 4.00 1.00 1.00 2.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCGT............................... 23 1 4.00 0.00 0.00 4.00 0.00 ................................................................................................TAAAGCGAGATTACCAAAGCAT............................... 22 1 4.00 0.00 2.00 2.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCAG............................... 23 1 4.00 0.00 2.00 2.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCAC............................... 22 1 4.00 0.00 1.00 3.00 0.00 ..................................................................................................AAGCTAGATTACCAAAGCAT............................... 20 1 4.00 2.00 1.00 1.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAG.................................. 19 1 4.00 0.00 2.00 2.00 0.00 .......................................................GCTTTGGCGCTTTAGCTGTA.......................................................................... 20 1 4.00 0.00 3.00 1.00 0.00 ...............................................................................................ATAAGGCTAGATTACCAAAGCAT............................... 23 1 4.00 0.00 0.00 4.00 0.00 ................................................................................................TAAAGCTAGCTTACCAAAGCAT............................... 22 1 4.00 0.00 4.00 0.00 0.00 ................................................................................................CAAAGCTAGATTACCAAAGCAT............................... 22 1 4.00 1.00 1.00 2.00 0.00 ................................................................................................TAAAGCTAGGTTACCAAAGCAT............................... 22 1 4.00 1.00 1.00 2.00 0.00 ................................................................................................TAAAGCTAGATCACCAAAGCAT............................... 22 1 4.00 2.00 1.00 1.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAACGCAT............................... 23 1 4.00 1.00 1.00 2.00 0.00 ...............................................................................................GTAAAGCTAGATTACCAAAGCAT............................... 23 1 4.00 0.00 1.00 3.00 0.00 ................................................................................................TAAAGCTAGATTTCCAAAGCAT............................... 22 1 3.00 0.00 2.00 1.00 0.00 ................................................................................................GAAAGCTAGATTACCAAAGCAT............................... 22 1 3.00 0.00 1.00 2.00 0.00 ...............................................................................................ATAAAGCTAGCTTACCAAAGCAT............................... 23 1 3.00 0.00 1.00 2.00 0.00 ................................................................................................TCAAGCTAGATTACCAAAGCCT............................... 22 1 3.00 0.00 2.00 1.00 0.00 ................................................................................................AAAAGCTAGATTACCAAAGCAT............................... 22 1 3.00 1.00 1.00 1.00 0.00 ...............................................................................................ACAAAGCTAGATTACCAAAGCAT............................... 23 1 3.00 2.00 0.00 1.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCATA.............................. 24 1 3.00 1.00 1.00 1.00 0.00 ................................................................................................TAAAGCTAGATTACCAGAGCAT............................... 22 1 3.00 1.00 1.00 1.00 0.00 ...............................................................................................ATCAAGCTAGATTACCAAAGCAT............................... 23 1 3.00 0.00 0.00 3.00 0.00 .......................................................GCTTTGGCGCTTTAGCTGTATT........................................................................ 22 1 3.00 0.00 3.00 0.00 0.00 ................................................................................................TAAAGCTAGATTACCAAATCAT............................... 22 1 3.00 0.00 0.00 3.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAGAGCAT............................... 23 1 3.00 0.00 3.00 0.00 0.00 ................................................................................................TAAAGCTAGATTACCAATGCAT............................... 22 1 3.00 0.00 0.00 3.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGAAT............................... 22 1 3.00 0.00 3.00 0.00 0.00 ...............................................................................................ATAATGCTAGATTACCAAAGCAT............................... 23 1 3.00 0.00 1.00 2.00 0.00 ................................................................................................TAAAGTTAGATTACCAAAGCAT............................... 22 1 3.00 0.00 1.00 2.00 0.00 ...............................................................................................ATAAAGTTAGATTACCAAAGCAT............................... 23 1 3.00 0.00 2.00 1.00 0.00 ................................................................................................TAAAGCTAGATTCCCAAAGCAT............................... 22 1 3.00 1.00 0.00 2.00 0.00 ...............................................................................................ATAGAGCTAGATTACCAAAGCAT............................... 23 1 3.00 0.00 2.00 1.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCATT.............................. 24 1 3.00 0.00 3.00 0.00 0.00 .......................................................GCTTTGGCGCTTTAGCTGTAT......................................................................... 21 1 3.00 0.00 1.00 2.00 0.00 ...............................................................................................ATAAAGCTAGATTACCTAAGCAT............................... 23 1 3.00 0.00 0.00 3.00 0.00 ................................................................................................TAAAGCTAGATTGCCAAAGCAT............................... 22 1 3.00 0.00 1.00 2.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAACGCCT............................... 23 1 3.00 0.00 0.00 3.00 0.00

droPer1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	super_1:9895076-9895222 +	57.64	ATGAGTGCCTTAGAGTGAAG----------------------CTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCAATCGTCAGAAACAAT GAAAGTGTTTAAAAGTACGACAATCTAATCTGTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-CTGTGGAAACTTCATCC-AAACAAT Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ................................................................................................TAAAGCTAGATTACCAAAGCAT............................... 22 1 6822.00 548.00 405.00 1727.00 4135.00 7.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCAT............................... 23 1 4893.00 257.00 197.00 1178.00 3261.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCA................................ 21 1 201.00 7.00 5.00 78.00 111.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCA................................ 22 1 118.00 11.00 4.00 33.00 70.00 0.00 .......................................................GCTTTGGCGCTTTAGCTGTATG........................................................................ 22 1 101.00 13.00 37.00 19.00 32.00 0.00 .................................................................................................AAAGCTAGATTACCAAAGCAT............................... 21 1 94.00 5.00 2.00 29.00 58.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGC................................. 20 1 76.00 4.00 1.00 28.00 40.00 3.00 ...............................................................................................ATAAAGCTAGATTACCAAAGC................................. 21 1 44.00 1.00 3.00 15.00 25.00 0.00 ................................................................................................TAAAGCTAGATTACCACAGCAT............................... 22 1 30.00 0.00 3.00 5.00 22.00 0.00 ...............................................................................................ATAAAGATAGATTACCAAAGCAT............................... 23 1 30.00 0.00 0.00 2.00 28.00 0.00 .......................................................GCTTTGGCGCTTTAGCTGTATGA....................................................................... 23 1 29.00 2.00 5.00 15.00 7.00 0.00 ...............................................................................................ATAAAGCTGGATTACCAAAGCAT............................... 23 1 29.00 0.00 1.00 5.00 23.00 0.00 ................................................................................................TAAAGATAGATTACCAAAGCAT............................... 22 1 27.00 1.00 0.00 15.00 11.00 0.00 ................................................................................................TAAAGCTAGAGTACCAAAGCAT............................... 22 1 24.00 0.00 1.00 0.00 23.00 0.00 ................................................................................................TAAAGCTGGATTACCAAAGCAT............................... 22 1 24.00 1.00 1.00 2.00 20.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCCT............................... 23 1 23.00 0.00 1.00 6.00 16.00 0.00 ................................................................................................TAAAGCTAGATTACCAACGCAT............................... 22 1 22.00 1.00 1.00 4.00 16.00 0.00 ................................................................................................TAAAGCTAGATGACCAAAGCAT............................... 22 1 22.00 0.00 1.00 2.00 19.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCCT............................... 22 1 20.00 0.00 2.00 4.00 14.00 0.00 ................................................................................................TAAAGCTAGATTACAAAAGCAT............................... 22 1 20.00 0.00 0.00 7.00 13.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCAC............................... 22 1 19.00 0.00 1.00 4.00 14.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCTT............................... 23 1 19.00 0.00 0.00 7.00 12.00 0.00 ................................................................................................TAAAGCTAGATTACCAAATCAT............................... 22 1 19.00 0.00 1.00 4.00 14.00 0.00 ................................................................................................TAAGGCTAGATTACCAAAGCAT............................... 22 1 19.00 0.00 2.00 6.00 11.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCTT............................... 22 1 18.00 0.00 1.00 1.00 16.00 0.00 ...............................................................................................ATAAAGCTAGATTACAAAAGCAT............................... 23 1 18.00 0.00 0.00 1.00 17.00 0.00 ...............................................................................................AGAAAGCTAGATTACCAAAGCAT............................... 23 1 18.00 0.00 0.00 0.00 18.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAG.................................. 20 1 18.00 1.00 4.00 4.00 9.00 0.00 ...............................................................................................ATAAAGCTAGCTTACCAAAGCAT............................... 23 1 17.00 1.00 0.00 2.00 14.00 0.00 ................................................................................................TAAAGCTAGATTACCAGAGCAT............................... 22 1 16.00 0.00 1.00 3.00 12.00 0.00 ................................................................................................TAAAGCTAGATTACCAAACCAT............................... 22 1 16.00 0.00 0.00 5.00 11.00 0.00 ................................................................................................TAAAGCGAGATTACCAAAGCAT............................... 22 1 15.00 0.00 0.00 0.00 15.00 0.00 ...............................................................................................ATAAGGCTAGATTACCAAAGCAT............................... 23 1 15.00 0.00 1.00 2.00 12.00 0.00 ...............................................................................................ATAAAGCGAGATTACCAAAGCAT............................... 23 1 15.00 0.00 0.00 1.00 14.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAATCAT............................... 23 1 15.00 0.00 2.00 1.00 12.00 0.00 ...............................................................................................ATAAAGCTAGATTAACAAAGCAT............................... 23 1 15.00 0.00 1.00 2.00 12.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAG.................................. 19 1 14.00 2.00 2.00 6.00 3.00 1.00 ................................................................................................TAAAGCTAGCTTACCAAAGCAT............................... 22 1 14.00 0.00 0.00 1.00 13.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCAC............................... 23 1 14.00 0.00 0.00 1.00 13.00 0.00 ................................................................................................TAAAGCTAGATTACCAAGGCAT............................... 22 1 14.00 0.00 2.00 2.00 10.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGAAT............................... 23 1 14.00 0.00 0.00 6.00 8.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCATT.............................. 23 1 14.00 1.00 1.00 5.00 7.00 0.00 ................................................................................................TAAAGCTAGATTAACAAAGCAT............................... 22 1 14.00 0.00 0.00 2.00 12.00 0.00 ...............................................................................................ATAAACCTAGATTACCAAAGCAT............................... 23 1 13.00 0.00 0.00 3.00 10.00 0.00 ................................................................................................TAAAGCTAGATTACCATAGCAT............................... 22 1 13.00 0.00 0.00 0.00 13.00 0.00 ................................................................................................TAACGCTAGATTACCAAAGCAT............................... 22 1 12.00 0.00 0.00 1.00 11.00 0.00 ...............................................................................................ATAAAGCTAGATTACCCAAGCAT............................... 23 1 12.00 0.00 1.00 4.00 7.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAACGCAT............................... 23 1 12.00 0.00 0.00 3.00 9.00 0.00 ................................................................................................TAGAGCTAGATTACCAAAGCAT............................... 22 1 12.00 0.00 0.00 2.00 10.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCGT............................... 22 1 12.00 0.00 0.00 3.00 9.00 0.00 ...............................................................................................ATAAAGCTAGACTACCAAAGCAT............................... 23 1 11.00 0.00 0.00 4.00 7.00 0.00 ...............................................................................................ATGAAGCTAGATTACCAAAGCAT............................... 23 1 11.00 1.00 0.00 0.00 10.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGCGT............................... 23 1 11.00 0.00 1.00 1.00 9.00 0.00 ...............................................................................................ATAAAGTTAGATTACCAAAGCAT............................... 23 1 11.00 1.00 0.00 1.00 9.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAA................................... 19 1 11.00 1.00 0.00 3.00 7.00 0.00 ................................................................................................TGAAGCTAGATTACCAAAGCAT............................... 22 1 11.00 0.00 0.00 1.00 10.00 0.00 ...............................................................................................ATAACGCTAGATTACCAAAGCAT............................... 23 1 10.00 0.00 1.00 1.00 8.00 0.00 ...............................................................................................ATAAAGCTAGATTACCACAGCAT............................... 23 1 10.00 0.00 1.00 1.00 8.00 0.00 ................................................................................................TAAAGCTAGATCACCAAAGCAT............................... 22 1 10.00 0.00 0.00 3.00 7.00 0.00 ...............................................................................................ATAAAGCCAGATTACCAAAGCAT............................... 23 1 9.00 1.00 0.00 1.00 7.00 0.00 ....................................TAAGCCCTGCTCTGCTTCT.............................................................................................. 19 1 9.00 0.00 0.00 0.00 0.00 9.00 ...............................................................................................ATAAAGCTAGATTACCAAACCAT............................... 23 1 9.00 0.00 0.00 1.00 8.00 0.00 ...............................................................................................GTAAAGCTAGATTACCAAAGCAT............................... 23 1 9.00 2.00 2.00 1.00 4.00 0.00 ...............................................................................................ATAAAGCTAGAGTACCAAAGCAT............................... 23 1 9.00 0.00 0.00 1.00 8.00 0.00 ................................................................................................TAAAGCTAGATTACCGAAGCAT............................... 22 1 9.00 1.00 0.00 2.00 6.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAGGCAT............................... 23 1 9.00 0.00 0.00 1.00 8.00 0.00 ...............................................................................................ATAGAGCTAGATTACCAAAGCAT............................... 23 1 9.00 0.00 0.00 2.00 7.00 0.00 ................................................................................................TAAAGCTAGACTACCAAAGCAT............................... 22 1 9.00 0.00 0.00 2.00 7.00 0.00 ...............................................................................................ATACAGCTAGATTACCAAAGCAT............................... 23 1 9.00 0.00 0.00 0.00 9.00 0.00 ................................................................................................TAAAGCTAGATTTCCAAAGCAT............................... 22 1 8.00 0.00 1.00 0.00 7.00 0.00 ...............................................................................................ATAAAGCTAGGTTACCAAAGCAT............................... 23 1 8.00 0.00 0.00 1.00 7.00 0.00 ................................................................................................TAATGCTAGATTACCAAAGCAT............................... 22 1 8.00 0.00 0.00 2.00 6.00 0.00 ...............................................................................................ATAAAGGTAGATTACCAAAGCAT............................... 23 1 8.00 0.00 0.00 1.00 7.00 0.00 ................................................................................................CAAAGCTAGATTACCAAAGCAT............................... 22 1 8.00 0.00 1.00 4.00 3.00 0.00 ...............................................................................................CTAAAGCTAGATTACCAAAGCAT............................... 23 1 8.00 2.00 0.00 0.00 6.00 0.00 ................................................................................................TAAAGCTATATTACCAAAGCAT............................... 22 1 8.00 0.00 1.00 1.00 6.00 0.00 ................................................................................................TAAAGCCAGATTACCAAAGCAT............................... 22 1 8.00 0.00 0.00 2.00 6.00 0.00 ................................................................................................TAAAACTAGATTACCAAAGCAT............................... 22 1 8.00 0.00 0.00 0.00 8.00 0.00 ................................................................................................TAAAGCTAGATTGCCAAAGCAT............................... 22 1 8.00 0.00 0.00 0.00 8.00 0.00 ...............................................................................................ATAAAGCTAGATCACCAAAGCAT............................... 23 1 7.00 0.00 0.00 1.00 6.00 0.00 ................................................................................................TAAAGCTAGATTACTAAAGCAT............................... 22 1 7.00 0.00 1.00 0.00 6.00 0.00 ................................................................................................TAAAGCTAGATTATCAAAGCAT............................... 22 1 7.00 1.00 0.00 1.00 5.00 0.00 ................................................................................................TAAAGCTAGGTTACCAAAGCAT............................... 22 1 7.00 0.00 1.00 2.00 4.00 0.00 ................................................................................................TAAATCTAGATTACCAAAGCAT............................... 22 1 7.00 3.00 2.00 0.00 2.00 0.00 ................................................................................................AAAAGCTAGATTACCAAAGCAT............................... 22 1 7.00 2.00 0.00 0.00 5.00 0.00 ...............................................................................................ATAAAGCTATATTACCAAAGCAT............................... 23 1 7.00 0.00 0.00 1.00 6.00 0.00 ...............................................................................................ATAAAGCTAGATTACTAAAGCAT............................... 23 1 7.00 0.00 0.00 1.00 6.00 0.00 ................................................................................................TAAAGCTAGATTACCCAAGCAT............................... 22 1 7.00 0.00 0.00 1.00 6.00 0.00 ................................................................................................TAAAGCTCGATTACCAAAGCAT............................... 22 1 7.00 0.00 1.00 1.00 5.00 0.00 ................................................................................................TAAAGCTAGATTCCCAAAGCAT............................... 22 1 7.00 0.00 0.00 3.00 4.00 0.00 ................................................................................................TAAAGCTAGAATACCAAAGCAT............................... 22 1 6.00 0.00 0.00 0.00 6.00 0.00 ................................................................................................TAAAGCTAGTTTACCAAAGCAT............................... 22 1 6.00 0.00 1.00 2.00 3.00 0.00 ...............................................................................................ATAAATCTAGATTACCAAAGCAT............................... 23 1 6.00 2.00 0.00 1.00 3.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAA.................................... 18 1 6.00 0.00 0.00 0.00 6.00 0.00 ................................................................................................TAAAGCTAGATTACCAAAGCAG............................... 22 1 6.00 0.00 0.00 0.00 6.00 0.00 ................................................................................................TTAAGCTAGATTACCAAAGCAT............................... 22 1 6.00 1.00 0.00 0.00 5.00 0.00 .................................................................................................AAAGCTAGATTACCAAAGCATT.............................. 22 1 6.00 0.00 1.00 2.00 3.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAGAGCAT............................... 23 1 6.00 0.00 0.00 1.00 5.00 0.00 ................................................................................................TAAAGCTAGATTACCAATGCAT............................... 22 1 6.00 0.00 0.00 1.00 5.00 0.00 ...............................................................................................ATAAAGATAGAGTACCAAAGCAT............................... 23 1 6.00 0.00 0.00 0.00 6.00 0.00 ...............................................................................................ATAAAGCTAGATTACCAAAGTAT............................... 23 1 5.00 0.00 0.00 0.00 5.00 0.00

droWil1 - 2 hits found