Possible Orthologs for dme-mir-6-2

droSim1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr2R:14253794-14253897 - 96.19
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TAACCATGCCGTTTTTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
..............................................................TATCACAGTGGCTGGTCTTTTT....................2232237.002.333.672.332228.67
..............................................................TATCACAGTGGCTGGTTTTTTT....................2231354.331.003.673.001346.67
..............................................................TATCACAGTGGCTGGTCTTTTTT...................233959.001.001.000.67956.33
..............................................................TATCACAGTGGCTGGTCTTTT.....................213890.331.671.673.67883.33
..............................................................TATCACAGTGGCTGGTTTTTT.....................213329.670.000.001.33328.33
..............................................................TATCACAGTGGCTGGTGTTTTT....................223131.333.000.000.33128.00
..............................................................TATCACAGTGGCTGGTCTTT......................203114.330.332.000.67111.33
..............................................................TATCACAGTGGCTGGTCTTTTTG...................23344.000.000.000.0044.00
..............................................................TATCACAGTGGCTGGTTTTTTTG...................23252.000.000.000.0052.00
..............................................................TATCACAGTGGCTGGTTTTT......................20331.001.000.330.0029.67
..............................................................TATCACAGTGGCTGTTCTTTT.....................21327.670.330.330.0027.00
..............................................................TATCACAGTGGCTGTTCTTTTT....................22327.331.000.000.0026.33
..............................................................TATCACAGTGGCTGGGCTTTTT....................22326.671.000.330.0025.33
..............................................................TATCACAGTGGCTGTTCTTTTTT...................23325.330.000.000.0025.33
......................AGGGAACTTCTGCTGCTGATATA...........................................................23170.0037.000.000.0033.00
..............................................................TATCACAGTGGCTTTTCTTTTTG...................23318.000.000.000.0018.00
......................AGGGAACTTCTGCTGCTGATAT............................................................22153.0021.000.000.0032.00
..............................................................TATCACAGTGGCTGGTGTTTT.....................21316.331.000.000.0015.33
..............................................................TATCACAGTGGCTGGTATTTTT....................22313.003.000.000.0010.00
..............................................................TATCACAGTGGCTxTTCTTTTTG...................22312.330.000.000.0012.33
..............................................................TATCACAGTGGCTGTTCTTT......................20311.000.000.000.0011.00
..............................................................TATCACATTGGCTGGTCTTTTT....................22310.670.000.000.0010.67
......................AGGGAACTTCTGCTGCTGATA.............................................................21121.006.000.000.0015.00
..............................................................TATCACAGTAGCTGTTCTTTTT....................2236.674.330.000.002.33
..............................................................TATCACAGTGGCTGGTCTTTTTTG..................24210.000.000.000.0010.00
..............................................................TATCACAGTGACTGTTCTTTTT....................2236.334.000.000.002.33
..............................................................TATCACAGTGGCTGTTTTTTT.....................2144.750.000.000.004.75
..............................................................TATCACAGTGGCTGGTCTT.......................1935.670.670.000.005.00
..............................................................TATCACAGTGGCTGTTTTTTTTT...................2335.330.000.000.005.33
...............................................................ATCACAGTGGCTGGTCTTTTT....................2135.330.000.000.005.33
..............................................................TATCACAGTGGCTGGTCTTTTTGT..................2427.000.000.000.007.00
..............................................................TATCACATTGGCTGTTCTTTTT....................2234.330.000.000.004.33
..............................................................TATCACAGTGGCTGTTTTTTTT....................2243.250.000.000.003.25
..............................................................TATCACAGCGGCTGGTCTTTTT....................2234.000.000.000.004.00
..............................................................TATCACAGTGGCCGTTCTTTTT....................2233.670.000.000.003.67
..............................................................TATCACGGTGGCTGTTCTTTTT....................2233.672.000.000.001.67
..............................................................TATCACAGTGGCCGTTCTTTTTG...................2333.330.000.000.003.33
..............................................................TATCACAGTGACTGTTCTTTTTG...................2333.000.000.000.003.00
..............................................................TATCACAGTGGCTGTTTTTT......................2042.000.000.000.002.00
..............................................................TATCACAGTGGCTGGTCT........................1832.670.000.000.002.67
..............................................................TATCACAGTGGCCGGTCTTTTT....................2232.672.000.000.000.67
..............................................................TATCACAGTGGCTGGTGTTT......................2032.670.670.000.002.00
..............................................................TATCACAGTGGCTxTTCTTTT.....................2032.670.000.330.002.33
..............................................................TATCGCAGTGGCTGGTCTTTTT....................2232.670.000.330.002.33
..............................................................TATCACAGTGGCTGTTCTTTTTG...................2332.670.000.000.002.67
..............................................................TATCACAGTGGCTxTTCTTTTT....................2132.330.000.000.002.33
..............................................................TATCACAGTxGCTGTTCTTTTT....................2132.331.330.000.001.00
..............................................................TATCACAGTGGCTTTTCTTTTT....................2232.330.000.000.002.33
..............................................................TATCACATTGGCTGTTCTTTT.....................2132.330.000.000.002.33
..............................................................TATCACAGTGGCTGGGCTTTT.....................2132.330.330.000.002.00
...............................................................ATCACAGTGGCTGGTCTTTTTT...................2232.000.000.000.002.00
..............................................................TATCACAGTGGCTGGTATTTT.....................2132.000.000.000.002.00
..............................................................TATCACAGTGGCTGTTGTTTTT....................2232.000.330.000.001.67
..............................................................TATCACGGTGGCTGTTCTTTT.....................2132.001.670.000.000.33
..............................................................TATCACAGTGGTTGTTCTTTTT....................2232.000.000.000.002.00
...............................................................ATCACAGTGGCTGGTCTTTT.....................2032.000.000.000.002.00
..............................................................TATCACAGTGACTGTTCTTTT.....................2132.000.670.000.001.33
..............................................................TATCACAGTGGCTCTTCTTTTTG...................2332.000.000.000.002.00
..............................................................TACCACAGTGGCTGGTCTTTTT....................2231.670.000.000.001.67
..............................................................TATCACACTGGCTGGTCTTTTT....................2231.670.000.000.001.67
..............................................................TATCACAGTGGCTGTTCTTTTTTT..................2431.670.000.000.001.67
................................................................TCACAGTGGCTGGTCTTTTT....................2031.670.000.000.001.67
..............................................................TATCACATTGGCTGTTCTTTTTT...................2331.670.000.000.001.67
..............................................................TATCACAGTTGCTGTTCTTTTT....................2241.250.250.000.001.00
..............................................................TATCACAGTGGCCGTTCTTTT.....................2131.670.000.000.001.67
..............................................................TATCACAGTGGCTGCTCTTTTT....................2231.671.330.000.000.33
..............................................................TATCACAGTGGCTGGTGTT.......................1931.331.000.000.000.33
..............................................................TATCACGGTGGCTGTTCTTTTTG...................2331.330.000.000.001.33
..............................................................TATCACGGTGGCTGTTCTTTTTT...................2331.331.000.000.000.33
...............................................................ATCACAGTGGCTGGTTTTTTT....................2131.330.000.000.001.33
..............................................................TATCGCAGTGGCTGGTCTTTT.....................2131.330.000.000.001.33
..............................................................TATCACACTGGCTGTTCTTTT.....................2131.330.000.000.001.33
..............................................................TATCACAGTGGCTGGTCTTTTTA...................2331.330.000.000.001.33
..............................................................TATCACAGTGGCTGTTGTTTTTT...................2331.000.000.000.001.00
..............................................................TATCACAGTAGCTGTTCTTTT.....................2131.000.330.000.000.67
..............................................................TATCACAGTGGCTGTCCTTTTT....................2231.000.000.000.001.00
..............................................................TATCACAGTGGCTxTTCTTTTTGT..................2321.500.000.000.001.50
..............................................................TATCACGGTGGCTGTTCTTT......................2031.001.000.000.000.00
..............................................................TATCACAGTGGCTGGTCTTTCT....................2231.000.670.000.000.33
..............................................................TACCACAGTGGCTGGTCTTTT.....................2131.000.000.000.001.00
..............................................................TATCACAGTGTCTGTTCTTTT.....................2131.000.330.000.000.67
..............................................................TATCACATTGGCTGGTCTTTT.....................2131.000.000.000.001.00
..............................................................TATCACAGTGGCTGGCCTTTTT....................2231.000.000.000.001.00
..............................................................TATCACAGTGGTTGTTCTTTT.....................2131.000.330.000.000.67
..............................................................TATCACAGTGGCxxTTCTTTTT....................2031.000.000.000.001.00
..............................................................TATCACAGTGGCTGCTCTTTT.....................2131.001.000.000.000.00
..............................................................TATCACAGTGGCTGGTCTTGT.....................2131.001.000.000.000.00
..............................................................TATCACAxTGGCTGTTCTTTTTG...................2231.000.000.000.001.00
..............................................................TATCACAGCGGCTGTTCTTTTT....................2231.000.000.000.001.00
.............................................................CTATCACAGTGGCTGGTCTTTTT....................2331.000.000.000.001.00
..................................................................ACAGTGGCTGGTCTTTTT....................1831.000.000.000.001.00
..............................................................TATCACAGTGGCTGGTATTTTTG...................2321.500.000.000.001.50
......................AGGGAACTTCTGCTGCTGAT..............................................................2013.002.000.000.001.00
..............................................................TATCACAGTTGCTGTTCTTTT.....................2140.750.250.000.000.50
..............................................................TATCACAGTGGCTGGTTTT.......................1931.000.330.000.000.67


droSec1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 super_1:13063092-13063195 - 96.19
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TAACCATGCCGTTTTTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
..............................................................TATCACAGTGGCTGTTCTTTTT....................22419927.003.5019730.50193.00
..............................................................TATCACAGTGGCTGTTCTTTT.....................2145992.252.505955.2534.50
..............................................................TATCACAGTGGCTGTTCTTTTTG...................2341764.500.251744.7519.50
..............................................................TATCACAGTGGCTGTTCTTT......................2041057.000.751047.508.75
..............................................................TATCACAGTGGCTGTTCTTTTTGT..................243433.000.00423.339.67
..............................................................TATCACAGTGGCTGGTCTTTTT....................224280.750.00280.000.75
..............................................................TATCACAGTGGCTGTTCTT.......................194194.000.00189.254.75
..............................................................TATCACAGTGGCTGTTCTTTTTT...................234124.000.25123.500.25
..............................................................TATCACAGTGGCTGTTCTTTTTA...................23494.250.0092.002.25
..................................................................ACAGTGGCTGTTCTTTTT....................18484.000.0083.500.50
..............................................................TATCACAGTGGCTGTTCCTTTT....................22562.200.0061.400.80
................................................................TATCAGTGGCTGTTCTTTTT....................20475.750.0075.500.25
..............................................................TATCACAGTGGCTGTTCTCTTT....................22460.000.2559.000.75
..............................................................TATCACAGTGGCTGTTTTTTTT....................22545.600.0044.401.20
..............................................................TATCACAGTGGCTxTTCTTTTT....................21453.750.0053.250.50
..............................................................TATTACAGTGGCTGTTCTTTTT....................22452.000.0052.000.00
..............................................................TATCACAGTGGCTGTTCT........................18450.250.0049.001.25
..............................................................TATCACAGTGGCTGCTCTTTTT....................22450.250.0049.500.75
..............................................................TATCACAGTGGCTGGTCTTTT.....................21444.250.0043.500.75
..............................................................TATCACAGTGGTTGTTCTTTTT....................22437.250.0037.250.00
..............................................................TATCGCAGTGGCTGTTCTTTTT....................22436.250.0035.750.50
...............................................................ATCACAGTGGCTGTTCTTTTT....................21432.250.0032.000.25
..............................................................TATCACAGTGGCTGTCCTTTTT....................22431.500.0031.250.25
..............................................................TATCACGGTGGCTGTTCTTTTT....................22430.750.0030.000.75
..............................................................TATCACAGTGGCCGTTCTTTTT....................22430.500.0030.000.50
..............................................................TATCACAGTxGCTGTTCTTTTT....................21427.500.0027.500.00
..............................................................TATCACAGTGGCTGTTCTTTTTGA..................24427.000.0027.000.00
..............................................................TATCACAGCGGCTGTTCTTTTT....................22426.250.0026.250.00
..............................................................TATCACAGTGGCxxTTCTTTTT....................20425.000.0024.500.50
..............................................................TATCACAGTGGCTTTTCTTTTT....................22424.250.0023.750.50
..............................................................TATCACAGTGGCTGTTCTTTTA....................22423.750.0023.500.25
..............................................................TATCATAGTGGCTGTTCTTTTT....................22423.500.0023.500.00
..............................................................TATCACAGTTGCTGTTCTTTTT....................22518.400.0018.200.20
..............................................................TACCACAGTGGCTGTTCTTTTT....................22422.000.0021.500.50
................................................................TATCAGTGGCTGTTCTTTT.....................19421.750.0021.250.50
..............................................................TATCACAGTGGCTGTTCTTTTC....................22421.500.0021.250.25
..............................................................TATCACAGTCGCTGTTCTTTTT....................22421.250.0021.250.00
..............................................................GATCACAGTGGCTGTTCTTTTT....................22421.250.0021.250.00
.............................................................CTATCACAGTGGCTGTTCTTTTT....................23421.000.0021.000.00
..............................................................TATCACATTGGCTGTTCTTTTT....................22419.750.0019.750.00
..............................................................TATCACAGTGGCTGATCTTTTT....................22418.500.0018.500.00
..............................................................TATTACAGTGGCTGTTCTTTT.....................21418.250.0018.250.00
..............................................................TATCACAGTGGCTGTTCCTTT.....................21514.200.0014.200.00
......................AGGGAACTTCTGCTGCTGATATA...........................................................23235.000.0035.000.00
..............................................................CATCACAGTGGCTGTTCTTTTT....................22417.500.0017.500.00
..............................................................TATCACTGTGGCTGTTCTTTTT....................22417.250.0017.250.00
......................AGGGAACTTCTGCTGCTGATAT............................................................22234.500.0034.000.50
..............................................................TATCACAGTGGCTxTTCTTTT.....................20416.500.0016.500.00
..............................................................TATCACAGTGGCTGTTTTTTT.....................21513.000.0012.800.20
..............................................................TATCACACTGGCTGTTCTTTTT....................22416.250.0016.250.00
..............................................................TATCACAGTGTCTGTTCTTTTT....................22416.000.0015.250.75
..............................................................TATCACAGTGGTTGTTCTTTT.....................21415.750.0015.750.00
..............................................................TATCACAGTGCCTGTTCTTTTT....................22415.750.0015.250.50
..............................................................TATCACAGTGGCTGCTCTTTT.....................21414.500.0014.500.00
..............................................................TATCACAGTGGCTCTTCTTTTT....................22414.500.0014.250.25
..............................................................TATCACGGTGGCTGTTCTTTT.....................21414.250.0014.250.00
..............................................................TATCACAGTGGCTGTTCTTCTT....................22414.000.0014.000.00
..............................................................TATCTCAGTGGCTGTTCTTTTT....................22413.500.0013.500.00
..............................................................TATCATAGTGGCTGTTCTTTT.....................21412.750.0012.750.00
..............................................................TATCACAGTGACTGTTCTTTTT....................22412.750.0012.750.00
..............................................................TATCACAGTAGCTGTTCTTTTT....................22412.250.0012.000.25
................................................................TCACAGTGGCTGTTCTTTTT....................20412.250.0012.000.25
..............................................................TGTCACAGTGGCTGTTCTTTTT....................22411.750.0011.750.00
..............................................................TATCGCAGTGGCTGTTCTTTT.....................21411.500.0011.500.00
..............................................................TATCACAGAGGCTGTTCTTTTT....................22411.500.0011.250.25
..............................................................TATCACAGTGGCTGTTCTTTCT....................22410.750.0010.750.00
..............................................................TATCACAGTGGCTGTTCTTTTTAA..................24410.500.0010.250.25
..............................................................TATCACAGTGGCTGGTCTTTTTG...................2349.500.009.500.00
..............................................................TATCACAATGGCTGTTCTTTTT....................2249.500.009.500.00
..............................................................TATCACAGTGGCAGTTCTTTTT....................2249.250.009.250.00
..............................................................TTTCACAGTGGCTGTTCTTTTT....................2248.500.008.500.00
..............................................................TATCACAGTGGCTATTCTTTTT....................2248.500.008.500.00
..............................................................TATCACAGTGGCCGTTCTTTT.....................2148.500.008.250.25
..................................................................ACAGTGGCTGTTCTTTTTG...................1948.250.008.250.00
..............................................................TATCACAGTGGCTGTTCTTTTTC...................2348.000.008.000.00
..............................................................TATCACAGTGGCTGTCCTTTT.....................2148.000.007.750.25
..............................................................TATCACAGTGGCTGTTCTCTTTG...................2347.750.007.750.00
................................................................TATCAGTGGCTGTTCTTTTTG...................21310.330.0010.330.00
..............................................................TATCACAGTGGCTTTTCTTTT.....................2147.750.007.750.00
..................................................................ACAGTGGCTGGTCTTTTT....................1847.500.007.500.00
..............................................................TATCACAGCGGCTGTTCTTTT.....................2147.500.007.500.00
..............................................................TATCACAGTGGCTGTACTTTTT....................2247.250.007.250.00
...............................................................ATCACAGTGGCTGTTCTTTTTG...................2247.250.007.250.00
..............................................................TATCACATTGGCTGTTCTTTT.....................2146.750.006.750.00
..............................................................TATCACCGTGGCTGTTCTTTTT....................2246.750.006.500.25
..............................................................TATCACAGTxGCTGTTCTTTT.....................2046.500.006.500.00
..............................................................CATCACAGTGGCTGTTCTTTT.....................2146.500.006.500.00
...............................................................TTCACAGTGGCTGTTCTTTTT....................2146.250.006.250.00
..............................................................GATCACAGTGGCTGTTCTTTT.....................2146.250.006.250.00
..............................................................TATCACAGTGGCTGTTCTCTT.....................2146.000.006.000.00
..............................................................TACCACAGTGGCTGTTCTTTT.....................2146.000.006.000.00
..............................................................TATCACAGTGGCTxTTCTTTTTG...................2246.000.006.000.00
..............................................................TATCACAGTGCCTGTTCTTTT.....................2145.750.005.750.00
.............................................................CTATCACAGTGGCTGTTCTTTT.....................2245.750.005.750.00
..............................................................TATCACAGTGGCTGTTCTTCT.....................2145.750.005.750.00
..............................................................TATCACAGTGGTTGTTCTTTTTG...................2345.750.005.500.25
..............................................................TATCACAGTGGCxxTTCTTTT.....................1945.750.005.750.00
..............................................................TATCACACTGGCTGTTCTTTT.....................2145.750.005.750.00
..............................................................TGTCACAGTGGCTGTTCTTTT.....................2145.500.005.500.00
..............................................................TCTCACAGTGGCTGTTCTTTTT....................2245.500.005.500.00
..............................................................TATCACAGTGGCTCTTCTTTT.....................2145.500.005.500.00
2 super_1:13063229-13063338 - 54.79
TAACCATG----CCGTTTTT-AACCCAAGGGAACTTCTGCTG--CTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TAAACTTAATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTG-TAAGTTAATATACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGGCATTTTACA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.....................................................................TATCACAGTGGCTGTTCTTTTT....................22419927.003.5019730.50193.00
.....................................................................TATCACAGTGGCTGTTCTTTT.....................2145992.252.505955.2534.50
.....................................................................TATCACAGTGGCTGTTCTTTTTG...................2341764.500.251744.7519.50
.....................................................................TATCACAGTGGCTGTTCTTT......................2041057.000.751047.508.75
.....................................................................TATCACAGTGGCTGTTCTTTTTGT..................243433.000.00423.339.67
.....................................................................TATCACAGTGGCTGGTCTTTTT....................224280.750.00280.000.75
.....................................................................TATCACAGTGGCTGTTCTT.......................194194.000.00189.254.75
.....................................................................TATCACAGTGGCTGTTCTTTTTT...................234124.000.25123.500.25
.....................................................................TATCACAGTGGCTGTTCTTTTTA...................23494.250.0092.002.25
.........................................................................ACAGTGGCTGTTCTTTTT....................18484.000.0083.500.50
.....................................................................TATCACAGTGGCTGTTCCTTTT....................22562.200.0061.400.80
.......................................................................TATCAGTGGCTGTTCTTTTT....................20475.750.0075.500.25
.....................................................................TATCACAGTGGCTGTTCTCTTT....................22460.000.2559.000.75
.....................................................................TATCACAGTGGCTGTTTTTTTT....................22545.600.0044.401.20
.....................................................................TATCACAGTGGCTxTTCTTTTT....................21453.750.0053.250.50
.....................................................................TATTACAGTGGCTGTTCTTTTT....................22452.000.0052.000.00
.....................................................................TATCACAGTGGCTGCTCTTTTT....................22450.250.0049.500.75
.....................................................................TATCACAGTGGCTGTTCT........................18450.250.0049.001.25
.....................................................................TATCACAGTGGCTGGTCTTTT.....................21444.250.0043.500.75
.....................................................................TATCACAGTGGTTGTTCTTTTT....................22437.250.0037.250.00
.....................................................................TATCGCAGTGGCTGTTCTTTTT....................22436.250.0035.750.50
......................................................................ATCACAGTGGCTGTTCTTTTT....................21432.250.0032.000.25
.....................................................................TATCACAGTGGCTGTCCTTTTT....................22431.500.0031.250.25
.....................................................................TATCACGGTGGCTGTTCTTTTT....................22430.750.0030.000.75
.....................................................................TATCACAGTGGCCGTTCTTTTT....................22430.500.0030.000.50
.....................................................................TATCACAGTxGCTGTTCTTTTT....................21427.500.0027.500.00
.....................................................................TATCACAGTGGCTGTTCTTTTTGA..................24427.000.0027.000.00
.....................................................................TATCACAGCGGCTGTTCTTTTT....................22426.250.0026.250.00
.....................................................................TATCACAGTGGCxxTTCTTTTT....................20425.000.0024.500.50
.....................................................................TATCACAGTGGCTTTTCTTTTT....................22424.250.0023.750.50
.....................................................................TATCACAGTGGCTGTTCTTTTA....................22423.750.0023.500.25
.....................................................................TATCATAGTGGCTGTTCTTTTT....................22423.500.0023.500.00
.....................................................................TATCACAGTTGCTGTTCTTTTT....................22518.400.0018.200.20
.....................................................................TACCACAGTGGCTGTTCTTTTT....................22422.000.0021.500.50
.......................................................................TATCAGTGGCTGTTCTTTT.....................19421.750.0021.250.50
.....................................................................TATCACAGTGGCTGTTCTTTTC....................22421.500.0021.250.25
.....................................................................TATCACAGTCGCTGTTCTTTTT....................22421.250.0021.250.00
.....................................................................GATCACAGTGGCTGTTCTTTTT....................22421.250.0021.250.00
....................................................................CTATCACAGTGGCTGTTCTTTTT....................23421.000.0021.000.00
.....................................................................TATCACATTGGCTGTTCTTTTT....................22419.750.0019.750.00
.....................................................................TATCACAGTGGCTGATCTTTTT....................22418.500.0018.500.00
.....................................................................TATTACAGTGGCTGTTCTTTT.....................21418.250.0018.250.00
.....................................................................TATCACAGTGGCTGTTCCTTT.....................21514.200.0014.200.00
.....................................................................CATCACAGTGGCTGTTCTTTTT....................22417.500.0017.500.00
...........................AGGGAATAGTTGCTGTGCTG-TA.............................................................22234.500.0034.500.00
.....................................................................TATCACTGTGGCTGTTCTTTTT....................22417.250.0017.250.00
.....................................................................TATCACAGTGGCTxTTCTTTT.....................20416.500.0016.500.00
.....................................................................TATCACAGTGGCTGTTTTTTT.....................21513.000.0012.800.20
.....................................................................TATCACACTGGCTGTTCTTTTT....................22416.250.0016.250.00
.....................................................................TATCACAGTGTCTGTTCTTTTT....................22416.000.0015.250.75
.....................................................................TATCACAGTGCCTGTTCTTTTT....................22415.750.0015.250.50
.....................................................................TATCACAGTGGTTGTTCTTTT.....................21415.750.0015.750.00
.....................................................................TATCACAGTGGCTGCTCTTTT.....................21414.500.0014.500.00
.....................................................................TATCACAGTGGCTCTTCTTTTT....................22414.500.0014.250.25
.....................................................................TATCACGGTGGCTGTTCTTTT.....................21414.250.0014.250.00
.....................................................................TATCACAGTGGCTGTTCTTCTT....................22414.000.0014.000.00
.....................................................................TATCTCAGTGGCTGTTCTTTTT....................22413.500.0013.500.00
.....................................................................TATCATAGTGGCTGTTCTTTT.....................21412.750.0012.750.00
.....................................................................TATCACAGTGACTGTTCTTTTT....................22412.750.0012.750.00
.....................................................................TATCACAGTAGCTGTTCTTTTT....................22412.250.0012.000.25
.......................................................................TCACAGTGGCTGTTCTTTTT....................20412.250.0012.000.25
.....................................................................TGTCACAGTGGCTGTTCTTTTT....................22411.750.0011.750.00
.....................................................................TATCGCAGTGGCTGTTCTTTT.....................21411.500.0011.500.00
.....................................................................TATCACAGAGGCTGTTCTTTTT....................22411.500.0011.250.25
.....................................................................TATCACAGTGGCTGTTCTTTCT....................22410.750.0010.750.00
.....................................................................TATCACAGTGGCTGTTCTTTTTAA..................24410.500.0010.250.25
.....................................................................TATCACAGTGGCTGGTCTTTTTG...................2349.500.009.500.00
.....................................................................TATCACAATGGCTGTTCTTTTT....................2249.500.009.500.00
.....................................................................TATCACAGTGGCAGTTCTTTTT....................2249.250.009.250.00
.....................................................................TATCACAGTGGCTATTCTTTTT....................2248.500.008.500.00
.....................................................................TATCACAGTGGCCGTTCTTTT.....................2148.500.008.250.25
.....................................................................TTTCACAGTGGCTGTTCTTTTT....................2248.500.008.500.00
.........................................................................ACAGTGGCTGTTCTTTTTG...................1948.250.008.250.00
.....................................................................TATCACAGTGGCTGTTCTTTTTC...................2348.000.008.000.00
.....................................................................TATCACAGTGGCTGTCCTTTT.....................2148.000.007.750.25
.....................................................................TATCACAGTGGCTGTTCTCTTTG...................2347.750.007.750.00
.......................................................................TATCAGTGGCTGTTCTTTTTG...................21310.330.0010.330.00
.....................................................................TATCACAGTGGCTTTTCTTTT.....................2147.750.007.750.00
.........................................................................ACAGTGGCTGGTCTTTTT....................1847.500.007.500.00
.....................................................................TATCACAGCGGCTGTTCTTTT.....................2147.500.007.500.00
.....................................................................TATCACAGTGGCTGTACTTTTT....................2247.250.007.250.00
......................................................................ATCACAGTGGCTGTTCTTTTTG...................2247.250.007.250.00
.....................................................................TATCACATTGGCTGTTCTTTT.....................2146.750.006.750.00
.....................................................................TATCACCGTGGCTGTTCTTTTT....................2246.750.006.500.25
.....................................................................TATCACAGTxGCTGTTCTTTT.....................2046.500.006.500.00
.....................................................................CATCACAGTGGCTGTTCTTTT.....................2146.500.006.500.00
......................................................................TTCACAGTGGCTGTTCTTTTT....................2146.250.006.250.00
.....................................................................GATCACAGTGGCTGTTCTTTT.....................2146.250.006.250.00
.....................................................................TACCACAGTGGCTGTTCTTTT.....................2146.000.006.000.00
.....................................................................TATCACAGTGGCTxTTCTTTTTG...................2246.000.006.000.00
.....................................................................TATCACAGTGGCTGTTCTCTT.....................2146.000.006.000.00
.....................................................................TATCACAGTGGCxxTTCTTTT.....................1945.750.005.750.00
.....................................................................TATCACAGTGGTTGTTCTTTTTG...................2345.750.005.500.25
.....................................................................TATCACAGTGGCTGTTCTTCT.....................2145.750.005.750.00
....................................................................CTATCACAGTGGCTGTTCTTTT.....................2245.750.005.750.00
.....................................................................TATCACAGTGCCTGTTCTTTT.....................2145.750.005.750.00
.....................................................................TATCACACTGGCTGTTCTTTT.....................2145.750.005.750.00
.....................................................................TATCACAGAGGCTGTTCTTTT.....................2145.500.005.500.00
.....................................................................TATCACAGTGGCTCTTCTTTT.....................2145.500.005.500.00
.....................................................................TGTCACAGTGGCTGTTCTTTT.....................2145.500.005.500.00
.....................................................................TCTCACAGTGGCTGTTCTTTTT....................2245.500.005.500.00


droYak2 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr2R:13624327-13624430 + 92.42
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TAACCATACCGTTTTTAACCGCAGGGAACCTCTGCTGCTGATATATTATTGAGAAACTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
......................AGGGAACCTCTGCTGCTGATATA...........................................................23314.3314.330.000.000.000.00
......................AGGGAACCTCTGCTGCTGATAT............................................................2236.336.000.000.000.330.00
..............................................................TATCACAGTAGCTGTTCTTTTT....................2272.432.430.000.000.000.00
..............................................................TATCACAGTGGCTGTTCTTTTT....................2272.430.710.001.710.000.00
..............................................................TATCACAGTGACTGTTCTTTTT....................2272.142.140.000.000.000.00
..............................................................TATCACAGTGGCTGGTCTTTTT....................2271.571.290.000.140.000.14
..............................................................TATCACAGTGGCTGGTGTTTTT....................2271.571.570.000.000.000.00
..............................................................TATCACAGTGGCTGTTCTTTT.....................2171.290.140.001.140.000.00
..............................................................TATCACAGTGGCTGGTATTTTT....................2271.141.140.000.000.000.00
..............................................................TATCACAGTGGCTGCTCTTTTT....................2271.141.140.000.000.000.00
..............................................................TATCACGGTGGCTGTTCTTTTT....................2270.860.860.000.000.000.00
..............................................................TATCACAGTGGCTGGGCTTTTT....................2270.710.710.000.000.000.00
..............................................................TATCACAGTGGCTGGTTTTTTT....................2270.710.290.000.000.140.29
..............................................................TATCACAGTGACTGTTCTTTT.....................2170.710.710.000.000.000.00
..............................................................TATCACAGTGGCTGGTCCTTTT....................2270.570.570.000.000.000.00
..............................................................TATCACAGTAGCTGTTCTTTT.....................2170.570.570.000.000.000.00
..............................................................TATCACAGTGGCTGGTGTTTT.....................2170.570.570.000.000.000.00
......................AGGGAACCTCTGCTGCTGATA.............................................................2131.331.330.000.000.000.00
..............................................................TATCACGGTGGCTGGTCTTTTT....................2270.570.570.000.000.000.00
..............................................................TATCACAGTGGCCGGTCTTTTT....................2270.570.570.000.000.000.00
..............................................................TATCACAGTGGCTGGTTTT.......................1970.570.570.000.000.000.00
..............................................................TATCACAGTGGCTGGTGTTT......................2070.430.430.000.000.000.00
..............................................................TATCACAGTGGCCGTTCTTTTT....................2270.430.430.000.000.000.00
..............................................................TATCACAGTGGTTGTTCTTTTT....................2270.430.430.000.000.000.00
..............................................................TATCACAGTGGGTGTTCTTTTT....................2270.430.430.000.000.000.00
..............................................................TATCACAGTGGCTGGTTTTTT.....................2170.430.290.000.000.000.14
2 chr2R:13624190-13624293 + 61.07
TAACCATGCCGTTTTTAACCCA-AGGGAACTTCTGCTG--CTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TAATCACA--GCCTTTAACGTAGAGGGAATAGTTGCTGTGCTG-TAAGTTAATAACAAATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGCCTAACAT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.......................AGGGAATAGTTGCTGTGCTG-TA.............................................................22229.0028.500.000.000.000.50
.................................................................TATCACAGTAGCTGTTCTTTTT....................2272.432.430.000.000.000.00
.................................................................TATCACAGTGGCTGTTCTTTTT....................2272.430.710.001.710.000.00
.................................................................TATCACAGTGACTGTTCTTTTT....................2272.142.140.000.000.000.00
.......................AGGGAATAGTTGCTGTGCTG-T..............................................................2127.507.500.000.000.000.00
.................................................................TATCACAGTGGCTGGTCTTTTT....................2271.571.290.000.140.000.14
.................................................................TATCACAGTGGCTGGTGTTTTT....................2271.571.570.000.000.000.00
.................................................................TATCACAGTGGCTGTTCTTTT.....................2171.290.140.001.140.000.00
.................................................................TATCACAGTGGCTGGTATTTTT....................2271.141.140.000.000.000.00
.................................................................TATCACAGTGGCTGCTCTTTTT....................2271.141.140.000.000.000.00
.................................................................TATCACGGTGGCTGTTCTTTTT....................2270.860.860.000.000.000.00
.......................AGGGAATAGTTGCTGTGCTG-...............................................................2022.502.500.000.000.000.00
.................................................................TATCACAGTGGCTGGGCTTTTT....................2270.710.710.000.000.000.00
.................................................................TATCACAGTGGCTGGTTTTTTT....................2270.710.290.000.000.140.29
.................................................................TATCACAGTGACTGTTCTTTT.....................2170.710.710.000.000.000.00
.................................................................TATCACAGTGGCTGGTCCTTTT....................2270.570.570.000.000.000.00
.................................................................TATCACAGTAGCTGTTCTTTT.....................2170.570.570.000.000.000.00
.................................................................TATCACAGTGGCTGGTGTTTT.....................2170.570.570.000.000.000.00
........................GGGAATAGTTGCTGTGCTG-TA.............................................................2122.002.000.000.000.000.00
.................................................................TATCACGGTGGCTGGTCTTTTT....................2270.570.570.000.000.000.00
.................................................................TATCACAGTGGCCGGTCTTTTT....................2270.570.570.000.000.000.00
.................................................................TATCACAGTGGCTGGTTTT.......................1970.570.570.000.000.000.00
.................................................................TATCACAGTGGCTGGTGTTT......................2070.430.430.000.000.000.00
.................................................................TATCACAGTGGCCGTTCTTTTT....................2270.430.430.000.000.000.00
.................................................................TATCACAGTGGTTGTTCTTTTT....................2270.430.430.000.000.000.00
.................................................................TATCACAGTGGGTGTTCTTTTT....................2270.430.430.000.000.000.00
.................................................................TATCACAGTGGCTGGTTTTTT.....................2170.430.290.000.000.000.14
3 chr2R:13624475-13624587 + 52.26
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTA-------CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-----TCCAA
AATTGAAAATTGTTCAAAAAGAAGGGAACGGTTGCTGATGATGTAGT---TCGAAACTCTCTCAATTTATATCACAGTGGCTGTTCTTTTTTATTTGGCAATCGATCTACATTCAG
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
......................AGGGAACGGTTGCTGATGATGTA.......................................................................23251.0051.000.000.000.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTT.........................2272.430.710.001.710.000.00
.....................................................................TATCACAGTAGCTGTTCTTTTT.........................2272.432.430.000.000.000.00
......................AGGGAACGGTTGCTGATGATGT........................................................................2228.508.500.000.000.000.00
.....................................................................TATCACAGTGACTGTTCTTTTT.........................2272.142.140.000.000.000.00
.....................................................................TATCACAGTGGCTGGTCTTTTT.........................2271.571.290.000.140.000.14
.....................................................................TATCACAGTGGCTGGTGTTTTT.........................2271.571.570.000.000.000.00
.....................................................................TATCACAGTGGCTGTTCTTTT..........................2171.290.140.001.140.000.00
......................AGGGAACGGTTGCTGATGATG.........................................................................2124.504.000.000.000.000.50
.....................................................................TATCACAGTGGCTGGTATTTTT.........................2271.141.140.000.000.000.00
.....................................................................TATCACAGTGGCTGCTCTTTTT.........................2271.141.140.000.000.000.00
.....................................................................TATCACGGTGGCTGTTCTTTTT.........................2270.860.860.000.000.000.00
.....................................................................TATCACAGTGACTGTTCTTTT..........................2170.710.710.000.000.000.00
.....................................................................TATCACAGTGGCTGGGCTTTTT.........................2270.710.710.000.000.000.00
.....................................................................TATCACAGTGGCTGGTTTTTTT.........................2270.710.290.000.000.140.29
.....................................................................TATCACAGTGGCTGGTTTT............................1970.570.570.000.000.000.00
.....................................................................TATCACAGTAGCTGTTCTTTT..........................2170.570.570.000.000.000.00
.....................................................................TATCACAGTGGCTGGTGTTTT..........................2170.570.570.000.000.000.00
.....................................................................TATCACAGTGGCCGGTCTTTTT.........................2270.570.570.000.000.000.00
.....................................................................TATCACGGTGGCTGGTCTTTTT.........................2270.570.570.000.000.000.00
.....................................................................TATCACAGTGGCTGGTCCTTTT.........................2270.570.570.000.000.000.00
.....................................................................TATCACAGTGGGTGTTCTTTTT.........................2270.430.430.000.000.000.00
.....................................................................TATCACAGTGGTTGTTCTTTTT.........................2270.430.430.000.000.000.00
.....................................................................TATCACAGTGGCCGTTCTTTTT.........................2270.430.430.000.000.000.00
.....................................................................TATCACAGTGGCTGGTGTTT...........................2070.430.430.000.000.000.00
...................AGAAGGGAACGGTTGCTGATGAT..........................................................................2321.501.000.000.000.500.00
.....................................................................TATCACAGTGGCTGGTTTTTT..........................2170.430.290.000.000.000.14


droEre2 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_4845:9748613-9748715 - 91.41
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
AACCCATACCGTTTTTAACCCCAGGGAACCTCTGCTGCTGATATATTATTGAA-AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAG
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
..............................................................TATCACAGTGGCTGTTCTTTTT....................2245.251.250.000.004.00
......................AGGGAACCTCTGCTGCTGATATA...........................................................2326.506.500.000.000.00
..............................................................TATCACAGTGGCTGGTCTTTTT....................2243.003.000.000.000.00
..............................................................TATCACAGTAGCTGTTCTTTTT....................2242.502.500.000.000.00
......................AGGGAACCTCTGCTGCTGATAT............................................................2224.504.500.000.000.00
..............................................................TATCACAGTGACTGTTCTTTTT....................2242.002.000.000.000.00
..............................................................TATCACAGTGGCTGGTTTTTTT....................2241.751.750.000.000.00
..............................................................TATCACAGTGGCTGTTCTTT......................2041.250.250.000.001.00
......................AGGGAACCTCTGCTGCTGATA.............................................................2122.502.500.000.000.00
..............................................................TATCACAGTGGCTGCTCTTTTT....................2241.251.250.000.000.00
..............................................................TATCACAGTGGCTGTTTTTTTT....................2250.800.800.000.000.00
..............................................................TATCACAGTGGCTGGTCTTTTTC...................2340.750.750.000.000.00
..............................................................TATCACAGTGGCTGGTCTTTT.....................2140.750.750.000.000.00
..............................................................TATCACGGTGGCTGTTCTTTT.....................2140.750.750.000.000.00
..............................................................TATCACAGTGGCTGGTATTTTT....................2240.750.750.000.000.00
..............................................................TATCACAGTGGCTGGTTTTT......................2040.750.750.000.000.00
2 scaffold_4845:9748752-9748845 - 54.77
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGC--TGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
CAGCC-------TTTAAAGTAGAGGGAATAGTTGCCGTGCTG-TAAGTTAATATATCATATCTATATCACAGTGGCTGTTCTTTTT----GTACCTAAAGTGCCTA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
................................................................TATCACAGTGGCTGTTCTTTTT----................2245.251.250.000.004.00
................................................................TATCACAGTGGCTGGTCTTTTT----................2243.003.000.000.000.00
................................................................TATCACAGTAGCTGTTCTTTTT----................2242.502.500.000.000.00
................................................................TATCACAGTGACTGTTCTTTTT----................2242.002.000.000.000.00
......................AGGGAATAGTTGCCGTGCTG-TA.............................................................2224.004.000.000.000.00
................................................................TATCACAGTGGCTGGTTTTTTT----................2241.751.750.000.000.00
................................................................TATCACAGTGGCTGCTCTTTTT----................2241.251.250.000.000.00
................................................................TATCACAGTGGCTGTTCTTT......................2041.250.250.000.001.00
................................................................TATCACAGTGGCTGTTTTTTTT----................2250.800.800.000.000.00
................................................................TATCACAGTGGCTGGTATTTTT----................2240.750.750.000.000.00
................................................................TATCACAGTGGCTGGTCTTTT.....................2140.750.750.000.000.00
................................................................TATCACAGTGGCTGGTCTTTTT----C...............2340.750.750.000.000.00
................................................................TATCACGGTGGCTGTTCTTTT.....................2140.750.750.000.000.00
................................................................TATCACAGTGGCTGGTTTTT......................2040.750.750.000.000.00


droFic1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000454039:847499-847601 - 87.6
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
CATCCATTCCGTTTTTAACCCTAGGGAACTTCTGCTGCTGATATATTATCGAA-AACTCGTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTTAAGTCCAG
SizeHit CountTotal Norm


droEug1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000409474:2397387-2397490 + 88.65
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
CAACCATGCCGTTTTTAACCCCAGGGAACCTCTGCTGTTGATATATAATCAGGAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAT
SizeHit CountTotal Norm
2 scf7180000409474:2397535-2397647 + 51.12
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACT-------ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-----TCCAA
AATTGAAAATTGTTCAAAAAGAAGGGAACCGTTGCTGATGGTGTAGTTC---AAAATTCTCACAATTTATATCACAGTGGCTGTTCTTTTTTGTTTGGCAATCGATCTACGTTCAA
SizeHit CountTotal Norm


droBia1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302143:3059278-3059377 - 84.84
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTA---CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TATCTATTCCGTTCTCAACCCCAGGGAACTTCTGCTGCTGATATATTA-------ACTAAAGCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
SizeHit CountTotal Norm
2 scf7180000302143:3059128-3059233 - 57.38
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACT-----ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATT--CCAA
AATTGAAAATTGTCCAAAAAGAAGGGAACGGTTGCTGGTGATGTAGT-TCGAAACTCTCACAGTTTATATCACAGTGGCTGTTCTTTTTTGTTTG----CCAATCGATCTA
SizeHit CountTotal Norm


droTak1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000415384:84590-84692 + 93.32
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
CACCCATTCCGTTTTTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGAA-AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
SizeHit CountTotal Norm


droEle1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000491201:2013437-2013539 - 88.55
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TACCCATTCCGTTTTTAACCACAGGGAACTTCTGCTGCTGATATATTAT-CAAAAACTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTCAAGTCCAG
SizeHit CountTotal Norm
2 scf7180000491201:2013581-2013695 - 48.45
TAACCATGCCGT--------------TTTTAACCCAAGGGAACTTCTGCTGC--TGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
AAACAGTTCTGTGCCGAATCTCAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCT-GTAAGTAACTAAACTATACCTATATCACAGTGGCTGTTCTTTTT----GTACCTAAAGTGCCAA
SizeHit CountTotal Norm


droRho1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000780066:74210-74312 + 86.65
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TACCAAGTCTGTTTTTAACCACAGGGAACTTCTGCTGCTGATATATTATCGAA-AACTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAGTCCAG
SizeHit CountTotal Norm
3 scf7180000780066:74363-74469 + 56.03
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACT-----ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-----TCCAA
AAATTGTTCA------AAAAGAAGGGAACCGTTGCTGATGATGTAGT-TTGAAATTCTCACCATTTATATCACAGTGGCTGTTCTTTTTTATTTGGCAATCGATCTACGTTCAG
SizeHit CountTotal Norm
2 scf7180000780066:74083-74175 + 54.54
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTG--CTGATATATTATTGAAAAACTA---CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
CAGCC-------TTTAAAGTAGAGGGAATAGTTGCTGTGCTG-TAAGTT----ACTAACTATACCTATATCACAGTGGCTGTTCTTTTT----GTACCTAAAGTGCCAA
SizeHit CountTotal Norm


droKik1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302679:88805-88907 - 80.94
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TTCTTCTACCGTGGTTAGCCCCAGGGAACTGCTGCTGCTGATATATTATC-AAGAATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAGTTCAG
SizeHit CountTotal Norm
3 scf7180000302679:88943-89042 - 60.47
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGT--TGCACGGCC-AATTCCAA
TCACACAGCC--TTTAAAGTAGAGAGAATAGCTGCTGC-GCTGTATGTTTGC----CATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGCGAAACACCAA
SizeHit CountTotal Norm
2 scf7180000302679:88651-88754 - 58.67
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAAC----T-ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAA
AAATTGTTC------AAAAAGAAGGGAACGGTTGCTGCTGATGTAGTTCTTAAATTCACACAATTTATATCACAGTGGCTGTTCTTTTTTGTTTGGCAATCGATCTACGT
SizeHit CountTotal Norm


droAna3 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_13266:9731948-9732061 + 65.14
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTG----------AAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
ATATTATTCCGGTGTTAGCCCCAGGGAACTGTTGCTGCTGATATATTATTCTCCCAAAAAAAAAATCACCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAGTTCAC
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
........................................................................TATCACAGTGGCTGTTCTTTT.....................2171.710.291.140.000.29
........................................................................TATCACAGTGGCTGTTCTTTTT....................2271.571.000.570.000.00
........................................................................TATCACAGTGGCTGTTCTTT......................2071.431.140.290.000.00
......................AGGGAACTGTTGCTGCTGATATA.....................................................................2333.000.000.330.002.67
........................................................................TATCACAGTGGCTGTTCTT.......................1970.710.290.430.000.00
......................AGGGAACTGTTGCTGCTGATAT......................................................................2231.000.000.000.330.67
........................................................................TATCACAGTGGCTGGTCTTTTT....................2270.430.140.140.000.14
........................................................................TATCACAGTGGCTGGTCTTT......................2070.430.140.000.000.29
........................................................................TATCACAGTGGCTGGTCTTTT.....................2170.290.000.290.000.00
........................................................................TATCACAGTGGCTGTTTTTTTT....................2280.250.000.000.000.25
........................................................................TATCACAGTAGCTGTTCTTTTT....................2270.290.000.000.000.29
........................................................................TATCACAGTGGCTGGTGTTTTT....................2270.290.000.000.000.29
........................................................................TATCACAGTGACTGTTCTTTTT....................2270.290.000.000.000.29
........................................................................TATCACAGTGGCTGTTCTTTTTG...................2370.290.140.140.000.00
........................................................................TATCACAGTGGCTGGGCTTTT.....................2170.140.000.000.000.14
........................................................................TATCACGGTGGCTGTTCTTTTT....................2270.140.000.000.000.14
........................................................................TATCACATTGTCTGTTCTTTT.....................2170.140.140.000.000.00
........................................................................TATCACAGTTGCTGTTCTTTTT....................2280.130.000.130.000.00
........................................................................TATCACAGTGGCTGTGCTTTT.....................2170.140.140.000.000.00
........................................................................TATCACAGCGGCTGGTCTTTTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGGCTTTTGTTTT.....................2170.140.000.000.000.14
........................................................................TATCACAGTGGATGTTCTTT......................2070.140.140.000.000.00
........................................................................TATCACAGTGGCTGTTGTTTTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGGCTGTTCTTGTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGGCTGGTCTTTTTT...................2370.140.000.140.000.00
........................................................................TATCACAGTGGCTGTTTTTGT.....................2170.140.000.000.140.00
........................................................................TATCACAGTGGTTGGTCTTTTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGGCTGTTCTTTTA....................2270.140.000.140.000.00
......................AGGGGACTGTTGCTGCTGATGTA.....................................................................2330.330.000.000.000.33
......................ATGGAACTGTTGCTGCTGATATA.....................................................................2330.330.000.000.000.33
........................................................................TATCACAGTGGCTGGTTTTTT.....................2170.140.000.000.000.14
......................AGGGAACGGTTGCTGCTGATGTA.....................................................................2350.200.000.000.000.20
........................................................................TATCACAGTGGCTGTTCTTTC.....................2170.140.000.140.000.00
......................AGGGAACTGTTTCTGCTTATATA.....................................................................2330.330.000.000.000.33
...............................................ATTCTCGCAAAAAAAAAAT................................................1930.330.000.330.000.00
........................................................................TATCACAGTGGCTGGTCTGTTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGCCTGTTCTTTTT....................2270.140.000.000.000.14
........................................................................TATCACAGGGGCTGTTCTTTTT....................2270.140.000.000.000.14
........................................................................GATCACAGTGGCTGTGCT........................1870.140.000.000.000.14
........................................................................TATCACAGTGGCTGGTGTTTT.....................2170.140.000.000.000.14
........................................................................TATCACAGTGGCTGGTTTTTTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGGCTGGTCT........................1870.140.000.140.000.00
........................................................................TATCACAGTGGCTGCTCCTTTT....................2270.140.000.000.000.14
........................................................................TATAACAGTGGCTGTTCTTTT.....................2170.140.000.140.000.00
........................................................................TATCACAGTGGCCGTTCTTTTT....................2270.140.000.140.000.00
........................................................................TATCACAGTGACTGTTCTTTTTT...................2370.140.000.000.000.14
........................................................................TATCACAGTGGCTGTCCTTTT.....................2170.140.000.000.000.14
......................GGGGAACTGTTGCTGCTGA.........................................................................1940.250.250.000.000.00
........................................................................TATCACAGTGGCTGGGCTTTTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGGCTGTTGTTTTTT...................2370.140.000.000.000.14
........................................................................TATCACAGTGGCTGGTCTTCTT....................2270.140.000.000.000.14
........................................................................TATCACAGTGGCTGTTCTTTTTAA..................2470.140.140.000.000.00
3 scaffold_13266:9732108-9732206 + 58.82
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
AATTGAAAATTGTTCAAAAAGAAGGGAACGGTCGCTGCTGATGTAGTTATTCGCATCATTTATATCACAGTGGCTGTTCTTTTTTGTTTG-----CCAATCGAT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
......................AGGGAACGGTCGCTGCTGATGTA...........................................................23210.500.000.500.0010.00
..............................................................TATCACAGTGGCTGTTCTTTT.....................2171.710.291.140.000.29
..............................................................TATCACAGTGGCTGTTCTTTTT....................2271.571.000.570.000.00
..............................................................TATCACAGTGGCTGTTCTTT......................2071.431.140.290.000.00
..............................................................TATCACAGTGGCTGTTCTT.......................1970.710.290.430.000.00
..............................................................TATCACAGTGGCTGGTCTTTTT....................2270.430.140.140.000.14
..............................................................TATCACAGTGGCTGGTCTTT......................2070.430.140.000.000.29
..............................................................TATCACAGTGGCTGGTCTTTTTTTTT................2621.000.000.000.001.00
..............................................................TATCACAGTAGCTGTTCTTTTT....................2270.290.000.000.000.29
..............................................................TATCACAGTGGCTGGTGTTTTT....................2270.290.000.000.000.29
..............................................................TATCACAGTGGCTGTTCTTTTTG...................2370.290.140.140.000.00
..............................................................TATCACAGTGACTGTTCTTTTT....................2270.290.000.000.000.29
..............................................................TATCACAGTGGCTGTTTTTTTT....................2280.250.000.000.000.25
..............................................................TATCACAGTGGCTGGTCTTTT.....................2170.290.000.290.000.00
......................AGGGAACGGTCGCTGCCGATGTA...........................................................2320.500.000.000.000.50
.......AATTGTTGAAAGAGAAGGG..............................................................................1920.500.000.500.000.00
..............................................................TATCACAGTGGCTGGTTTTTTT....................2270.140.000.000.000.14
..............................................................TATCACATTGTCTGTTCTTTT.....................2170.140.140.000.000.00
..............................................................TATCACAGTGACTGTTCTTTTTT...................2370.140.000.000.000.14
..............................................................TATCACAGCGGCTGGTCTTTTT....................2270.140.000.000.000.14
.....................AAGGGAACGGGAGCTG...................................................................1620.500.000.000.500.00
.....................AAGGGAACGGTCTTTGC..................................................................1720.500.000.000.500.00
......................AGGGATCGGGCGCTGCT.................................................................1720.500.000.000.500.00
..............................................................TATCACAGTCGCTGTTCTTTTTTT..................2420.500.000.000.000.50
..............................................................TATCACAGTGGCTGTTCTTTTTCTT.................2520.500.000.000.000.50
......................AGGGAACGGTCGCTGCTGATGT............................................................2220.500.000.000.000.50
........ATTGTTGAAAGAGAAGGG..............................................................................1820.500.500.000.000.00
..............................................................TATCACAGTGGCTGCTCCTTTT....................2270.140.000.000.000.14
....................CAAGGGAACGGGCGCTGCT.................................................................1920.500.000.000.500.00
..............................................................TATCACAGTGGCTGGTCTTTTTTC..................2440.250.000.000.000.25
..............................................................TATCACAGTGGCTGTTGTTTTTTTT.................2520.500.000.000.000.50
..............................................................TATCACAGTGGCTGTTCTTTTTTTTT................2620.500.000.000.000.50
..............................................................TATCACAGTTGCTGTTCTTTTT....................2280.130.000.130.000.00
......................AGGGAACGGTCGCTGCTGATCAA...........................................................2320.500.000.000.000.50
..............................................................TATCACAGTGGCTGGTCTGTTT....................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTCTTTTTAA..................2470.140.140.000.000.00
......................AGGGAACGGTTGCTGCTGATGTA...........................................................2350.200.000.000.000.20
.....................AAGGGAACGGGCGGTGC..................................................................1720.500.000.000.500.00
..............................................................TATCACAGTGGCTGGTCTTTTTTT..................2420.500.000.000.000.50
..............................................................TATCACAGTGGCTGxTCTTTTTTTTT................2520.500.000.000.000.50
..............................................................TATCACAGTGGCTGTTGTTTTTT...................2370.140.000.000.000.14
..............................................................TATCACAGGGGCTGTTCTTTTT....................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTCTTTTA....................2270.140.000.140.000.00
..............................................................TATCACAGTGGCTTTTGTTTT.....................2170.140.000.000.000.14
..............................................................TATCACAGTGGCTGGGCTTTTTT...................2320.500.000.000.000.50
..............................................................TATAACAGTGGCTGTTCTTTT.....................2170.140.000.140.000.00
.....................AAGGGAACGGCCGGTGC..................................................................1720.500.000.000.500.00
......................AGGGAACGGTCGCTGCTCATGTA...........................................................2320.500.000.000.000.50
..............................................................TATCACAGTGGCTGTGCTTTT.....................2170.140.140.000.000.00
..............................................................TATCACAGTGGCTGTTTTTGT.....................2170.140.000.000.140.00
..............................................................TATCACAGTGGCTGGTCGTTTTT...................2320.500.000.000.000.50
..............................................................TATCACAGTGGCTGGTCT........................1870.140.000.140.000.00
....................CAAGGGAACGGGCGCTG...................................................................1720.500.000.000.500.00
..............................................................TATCACAGTGGCTGTTCTTTC.....................2170.140.000.140.000.00
......................AGGGAACGGGCGCTGCTGTTGTA...........................................................2320.500.000.000.000.50
..............................................................TATCACAGTGGCTGGTGTTTTTT...................2320.500.000.000.000.50
..............................................................TATCACAGTGGCTGGTTTTTT.....................2170.140.000.000.000.14
..............................................................TATCACAGTGGCCGTTCTTTTT....................2270.140.000.140.000.00
...TGAAATTTGTTCCAAAAGA..................................................................................1920.500.000.000.000.50
..............................................................TATCACAGTGGCTGTTGTTTTTTTTT................2620.500.000.000.000.50
..............................................................TATCACAGTGGCTGTTGTTTTT....................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTCTTGTT....................2270.140.000.000.000.14
..............................................................TATCACAGTGGATGTTCTTT......................2070.140.140.000.000.00
..............................................................TATCACAGTGGTTGGTCTTTTT....................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGGTCTTTTTT...................2370.140.000.140.000.00
.....................AAGGGAACGGGCTCTGC..................................................................1720.500.000.000.500.00
........ATTGTTGAAAAGGAAGGG..............................................................................1820.500.500.000.000.00
..............................................................TATCACAGTGGCTGGTGTTTT.....................2170.140.000.000.000.14
..............................................................TATCACAGTGGCTGGGCTTTT.....................2170.140.000.000.000.14
..............................................................TATCACAGTGGCTGGTCTTTTTTTTTT...............2720.500.000.000.000.50
..............................................................TATCACAGTGGCTGTCCTTTT.....................2170.140.000.000.000.14
.....................AAGGGAACGGGAGCTGCT.................................................................1820.500.000.000.500.00
..............................................................TATCACAGTGGCTGGTCTTCTT....................2270.140.000.000.000.14
..............................................................TATCACGGTGGCTGTTCTTTTT....................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGGGCTTTTT....................2270.140.000.000.000.14
..............................................................GATCACAGTGGCTGTGCT........................1870.140.000.000.000.14
......AAATTGTTCAAAGGGAAGG...............................................................................1920.500.500.000.000.00
..............................................................TATCACAGTGCCTGTTCTTTTT....................2270.140.000.000.000.14
2 scaffold_13266:9731810-9731913 + 53.86
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTG----------GTTGCACGGCCAATTCCAA
--------CCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTAAGTTTCAAAATC---TATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGCCAAACAGCCAAACCCGA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
..............................................................TATCACAGTGGCTGTTCTTTT...............................2171.710.291.140.000.29
..............................................................TATCACAGTGGCTGTTCTTTTT..............................2271.571.000.570.000.00
..............................................................TATCACAGTGGCTGTTCTTT................................2071.431.140.290.000.00
.......................AGAGAATAGTTGCTGTGCTATA.....................................................................2224.500.000.000.004.50
..............................................................TATCACAGTGGCTGTTCTT.................................1970.710.290.430.000.00
..............................................................TATCACAGTGGCTGGTCTTTTT..............................2270.430.140.140.000.14
..............................................................TATCACAGTGGCTGGTCTTT................................2070.430.140.000.000.29
..............................................................TATCACAGTGGCTGTTCTTTTTG.............................2370.290.140.140.000.00
..............................................................TATCACAGTGGCTGTTTTTTTT..............................2280.250.000.000.000.25
..............................................................TATCACAGTGGCTGGTGTTTTT..............................2270.290.000.000.000.29
..............................................................TATCACAGTGACTGTTCTTTTT..............................2270.290.000.000.000.29
..............................................................TATCACAGTGGCTGGTCTTTT...............................2170.290.000.290.000.00
..............................................................TATCACAGTAGCTGTTCTTTTT..............................2270.290.000.000.000.29
..............................................................TATCACAGTGACTGTTCTTTTTT.............................2370.140.000.000.000.14
..............................................................TATCACAGTGGCTGGTCTGTTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGGGCTTTT...............................2170.140.000.000.000.14
..............................................................TATCACAGTGGCTGGTCT..................................1870.140.000.140.000.00
..............................................................TATCACAGTGGCTGCTCCTTTT..............................2270.140.000.000.000.14
..............................................................GATCACAGTGGCTGTGCT..................................1870.140.000.000.000.14
..............................................................TATCACAGTGGCTTTTGTTTT...............................2170.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTGTTTTTT.............................2370.140.000.000.000.14
..............................................................TATCACAGTGGTTGGTCTTTTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGGTTTTTTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTCTTTTTAA............................2470.140.140.000.000.00
..............................................................TATCACAGTGGCTGGTTTTTT...............................2170.140.000.000.000.14
..............................................................TATCACAGTTGCTGTTCTTTTT..............................2280.130.000.130.000.00
..............................................................TATCACAGTGGATGTTCTTT................................2070.140.140.000.000.00
..............................................................TATCACAGCGGCTGGTCTTTTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGCCTGTTCTTTTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTCTTGTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGGGCTTTTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGTGCTTTT...............................2170.140.140.000.000.00
.......................AGAGAATAGTTGCTGTGCTCTA.....................................................................2220.500.000.000.000.50
..............................................................TATCACAGTGGCTGTTTTTGT...............................2170.140.000.000.140.00
..............................................................TATCACAGTGGCTGGTCTTTTTTC............................2440.250.000.000.000.25
..............................................................TATCACAGTGGCTGTTCTTTC...............................2170.140.000.140.000.00
..............................................................TATCACAGTGGCTGGTCTTTTTT.............................2370.140.000.140.000.00
..............................................................TATCACAGTGGCTGGTGTTTT...............................2170.140.000.000.000.14
..............................................................TATCACAGTGGCTGTCCTTTT...............................2170.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTGTTTTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCTGTTCTTTTA..............................2270.140.000.140.000.00
..............................................................TATAACAGTGGCTGTTCTTTT...............................2170.140.000.140.000.00
..............................................................TATCACGGTGGCTGTTCTTTTT..............................2270.140.000.000.000.14
..............................................................TATCACATTGTCTGTTCTTTT...............................2170.140.140.000.000.00
..............................................................TATCACAGTGGCTGGTCTTCTT..............................2270.140.000.000.000.14
..............................................................TATCACAGTGGCCGTTCTTTTT..............................2270.140.000.140.000.00
..............................................................TATCACAGGGGCTGTTCTTTTT..............................2270.140.000.000.000.14


droBip1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000396427:874897-875006 + 71.65
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTAT------TGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TTATTATTCCGGTGTTAACCCCAGGGAACTGTTGCTGCTGATATATTATACTTTCGAACTATCTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACCGTCAAGTTCAA
SizeHit CountTotal Norm
3 scf7180000396427:875055-875156 + 59.03
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
ATTGAAAATTGTTC-AAAAAGAAGGGAACGGTTGCTGCTGATGTAGTTATTCGCCTCATTTATATCACAGTGGCTGTTCTTTTTTGTTTGGCAATCGAT--CTA
SizeHit CountTotal Norm
2 scf7180000396427:874761-874865 + 52.37
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTG-C--TGCTGATATATTATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTG----------GTTGCACGGCCAATTCCAA
TACC-----CGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTG-TATGTTACCA------TTCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGCCAAACAGCCAAGACCCA
SizeHit CountTotal Norm


dp4 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 chr3:12676931-12677045 - 67.1
TAACCATGCCGTTTT--TAACCCAAGGGAACTTCTGCTGCTGATATATTAT-----------TGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TCCCCGTGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTTGA--CATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAGTCCAA
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
........................AGGGAACCGCTGCTGCTGATATA......................................................................2339.000.009.000.000.00
...........................................................................TATCACAGTAGCTGTTCTTTTT....................2281.500.001.500.000.00
...........................................................................TATCACAGTGACTGTTCTTTTT....................2281.380.001.380.000.00
...........................................................................TATCACAGTGGCTGGTCTTTTT....................2281.250.001.250.000.00
...........................................................................TATCACAGTGGCTGTTCTTTTT....................2281.250.880.380.000.00
...........................................................................TATCACAGTGGCTGGTATTTTT....................2281.130.001.130.000.00
...........................................................................TATCACAGTGGCTGGTGTTTTT....................2281.000.001.000.000.00
...........................................................................TATCACAGTGGCTGTTCTTTT.....................2180.880.630.250.000.00
...........................................................................TATCACAGTGGCTGGGCTTTTT....................2280.630.000.630.000.00
...........................................................................TATCACAGTGGCTGGTGTTTT.....................2180.630.000.630.000.00
...........................................................................TATCACGGTGGCTGTTCTTTTT....................2280.500.000.500.000.00
...........................................................................TATCACGGTGGCTGTTCTTTTTT...................2380.500.000.500.000.00
...........................................................................TATCACAGTAGCTGTTCTTT......................2080.380.000.380.000.00
...........................................................................TATCACAGTAGCTGTTCTTTT.....................2180.380.000.380.000.00
...........................................................................TATCACAGTGGCTGGTGTT.......................1980.380.000.380.000.00
...........................................................................TATCACAGTGGCTGGTCTTTT.....................2180.380.000.380.000.00
...........................................................................TATCACAGTGGCTGCTCTTTTT....................2280.380.000.380.000.00
...............................................TTATCCACCCATCTTTGA--CATTTCT...........................................2531.000.001.000.000.00
3 chr3:12676792-12676898 - 58.4
TAACCATGCCGTTTTT--AACCCAAGGGAACTTCTGCTGCTGATATAT------TATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT--TCCAA
AAATTGAAAA-TTGTTCAAAAAGAAGGGAACGGTTGCTGCTGATGTAGTTCAAGTTTTGCACAATT--TATATCACAGTGGCTGTTCTTTTTTGTTTG----CCAATCGATCAC
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
........................AGGGAACGGTTGCTGCTGATGTA...................................................................23267.500.0067.500.000.00
......................................................................TATCACAGTAGCTGTTCTTTTT......................2281.500.001.500.000.00
......................................................................TATCACAGTGACTGTTCTTTTT......................2281.380.001.380.000.00
......................................................................TATCACAGTGGCTGGTCTTTTT......................2281.250.001.250.000.00
......................................................................TATCACAGTGGCTGTTCTTTTT......................2281.250.880.380.000.00
......................................................................TATCACAGTGGCTGGTATTTTT......................2281.130.001.130.000.00
......................................................................TATCACAGTGGCTGGTGTTTTT......................2281.000.001.000.000.00
......................................................................TATCACAGTGGCTGTTCTTTT.......................2180.880.630.250.000.00
........................AGGGAACGGTTGCTGCTGATG.....................................................................2123.000.003.000.000.00
........................AGGGAACGGTTGCTGCTGATGT....................................................................2223.000.003.000.000.00
......................................................................TATCACAGTGGCTGGGCTTTTT......................2280.630.000.630.000.00
......................................................................TATCACAGTGGCTGGTGTTTT.......................2180.630.000.630.000.00
......................................................................TATCACGGTGGCTGTTCTTTTTT.....................2380.500.000.500.000.00
......................................................................TATCACGGTGGCTGTTCTTTTT......................2280.500.000.500.000.00
......................................................................TATCACAGTAGCTGTTCTTTT.......................2180.380.000.380.000.00
......................................................................TATCACAGTGGCTGGTCTTTT.......................2180.380.000.380.000.00
........................AGGGAACGGTTGCTGCTGATTTA...................................................................2321.500.001.500.000.00
......................................................................TATCACAGTGGCTGGTGTT.........................1980.380.000.380.000.00
........................AGGGAACGGTTGCTGCTGATGTAA..................................................................2421.500.001.500.000.00
......................................................................TATCACAGTGGCTGCTCTTTTT......................2280.380.000.380.000.00
......................................................................TATCACAGTGGCTGGGCTTTTTT.....................2321.500.001.500.000.00
......................................................................TATCACAGTGGCTGGTGTTTTTT.....................2321.500.001.500.000.00
......................................................................TATCACAGTAGCTGTTCTTT........................2080.380.000.380.000.00
1 chr3:12677083-12677205 - 42.8
TAACCATGCCGT----------------TTTTAACCCAAGGGAACTTCTGCTGCTGATATAT-TATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGT--TGCACGGCCAAT--TCCAA
ACGCTCAGCGGTGGAGACCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTG-TGCTATATGTCCTTCGACTCTA-TATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGCCAAACAGCCAA
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
......................................AGAGAATAGTTGCTG-TGCTATA................................................................223246.330.00246.330.000.00
......................................AGAGAATAGTTGCTG-TGCTAT.................................................................21387.330.0087.330.000.00
......................................AGAGAATAGTTGCTG-TGCTATAT...............................................................23316.000.0016.000.000.00
......................................AGAGAATAGTTGCTG-TGCTA..................................................................2038.670.008.670.000.00
.......................................GAGAATAGTTGCTG-TGCTATAT...............................................................2235.330.005.330.000.00
......................................AGAGAATAGTTGCTG-TGCTATT................................................................2234.330.004.330.000.00
...............................................................................TATCACAGTAGCTGTTCTTTTT........................2281.500.001.500.000.00
...............................................................................TATCACAGTGACTGTTCTTTTT........................2281.380.001.380.000.00
...............................................................................TATCACAGTGGCTGTTCTTTTT........................2281.250.880.380.000.00
...............................................................................TATCACAGTGGCTGGTCTTTTT........................2281.250.001.250.000.00
...............................................................................TATCACAGTGGCTGGTATTTTT........................2281.130.001.130.000.00
......................................AGAGAATAGTTGCTG-TGCTCTA................................................................2233.000.003.000.000.00
...............................................................................TATCACAGTGGCTGGTGTTTTT........................2281.000.001.000.000.00
......................................AGAGAATAGTTGCTG-TGCTCT.................................................................2132.330.002.330.000.00
.......................................GAGAATAGTTGCTG-TGCTAT.................................................................2032.330.002.330.000.00
...............................................................................TATCACAGTGGCTGTTCTTTT.........................2180.880.630.250.000.00
......................................AGAGAATAGTTGCTG-TTCTATA................................................................2232.000.002.000.000.00
.......................................GAGAATAGTTGCTG-TGCTATA................................................................2132.000.002.000.000.00
......................................AGAGAATAGTTGCTG-TGCTATC................................................................2232.000.002.000.000.00
...............................................................................TATCACAGTGGCTGGTGTTTT.........................2180.630.000.630.000.00
...............................................................................TATCACAGTGGCTGGGCTTTTT........................2280.630.000.630.000.00
......................................AGAGAATAGTTGCTG-TGGTATA................................................................2231.330.001.330.000.00
......................................AGAGAATAGTTGCTG-TGATATA................................................................2231.330.001.330.000.00
......................................AGAGAATAGTTGCTG-TGGTAT.................................................................2131.330.001.330.000.00
...............................................................................TATCACGGTGGCTGTTCTTTTTT.......................2380.500.000.500.000.00
......................................AGAGAATAGTTGCTG-GGCTAT.................................................................2131.330.001.330.000.00
...............................................................................TATCACGGTGGCTGTTCTTTTT........................2280.500.000.500.000.00
......................................AGAGAATAGTTGCTG-TTCTAT.................................................................2131.330.001.330.000.00
......................................AGAGAATAGTTGCTG-TGCTTTA................................................................2231.330.001.330.000.00
......................................AGAGAATAGCTGCTG-TGCTATA................................................................2231.330.001.330.000.00
...............................................................................TATCACAGTGGCTGCTCTTTTT........................2280.380.000.380.000.00
...............................................................................TATCACAGTGGCTGGTCTTTT.........................2180.380.000.380.000.00
...............................................................................TATCACAGTGGCTGGTGTT...........................1980.380.000.380.000.00
......................................AGAGAATAGTTGCTG-TGCTTT.................................................................2131.000.001.000.000.00
...............................................................................TATCACAGTAGCTGTTCTTT..........................2080.380.000.380.000.00
......................................AAAGAATAGTTGCTG-TGCTATA................................................................2231.000.001.000.000.00
......................................AGAGAATAGTTGCTG-TGGTTTA................................................................2231.000.001.000.000.00
......................................AGAGAATAGTTGCTG-TGCTATAAA..............................................................2431.000.001.000.000.00
......................................AGAGAATAGTTGCTG-TGCTGTG................................................................2231.000.001.000.000.00
...............................................................................TATCACAGTAGCTGTTCTTTT.........................2180.380.000.380.000.00
......................................GGAGAATAGTTGCTG-TGCTATA................................................................2231.000.001.000.000.00
......................................AGAGAATAGTTGCTG-TGCTGTA................................................................2231.000.001.000.000.00


droPer1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 super_2:8906627-8906741 + 67.1
TAACCATGCCGTTTT--TAACCCAAGGGAACTTCTGCTGCTGATATATTAT-----------TGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TCCCCGTGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTTGA--CATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAGTCCAA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
...........................................................................TATCACAGTGGCTGGTCTTTTT....................22758.140.140.000.000.0058.00
...........................................................................TATCACAGTGGCTGGTTTTTTT....................22742.000.000.000.000.0042.00
...........................................................................TATCACAGTGGCTGGTCTTTT.....................21735.860.140.290.000.0035.43
...........................................................................TATCACAGTGGCTGGTTTTTT.....................21711.000.000.000.000.0011.00
...........................................................................TATCACAGTGGCTGGTCTTT......................2077.140.140.000.000.007.00
...........................................................................TATCACAGTGGCTGGTCTTTTTT...................2374.860.000.000.000.004.86
...........................................................................TATCACAGTGGCTGGTGTTTTT....................2274.570.000.000.000.004.57
...........................................................................TATCACAGTGGCTGTTCTTTTT....................2273.572.140.000.000.141.29
...........................................................................TATCACAGTGGCTGTTCTTTT.....................2171.860.710.000.000.001.14
........................AGGGAACCGCTGCTGCTGATAT.......................................................................2234.000.000.670.000.003.33
...........................................................................TATCACATTGGCTGGTCTTTTT....................2271.570.000.000.000.001.57
........................AGGGAACCGCTGCTGCTGATATA......................................................................2332.670.001.330.000.001.33
...........................................................................TATCACAGTGGCTGGGCTTTTT....................2271.140.000.000.000.001.14
...........................................................................TATCACAGTGGCTGGTTTTT......................2071.140.000.000.000.001.14
...........................................................................TATCACAGTGACTGTTCTTTTT....................2271.140.000.710.000.140.29
...........................................................................TATCACAGTGGCTGTTCTTT......................2071.000.140.000.000.000.86
........................AGGGAACTGTTGCTGCTGATATA......................................................................2351.400.000.000.000.001.40
...........................................................................TATCACAGTGGCTGGTGTTTT.....................2170.860.000.140.000.140.57
...........................................................................TATCACAGTGGCTGGTCTT.......................1970.710.000.140.000.000.57
...........................................................................TATCACAGTGGCTGTTTTTTTT....................2280.630.250.000.000.000.38
...........................................................................TATCACAGTAGCTGTTCTTTTT....................2270.570.000.570.000.000.00
...........................................................................TATCACAGTGGCTTTTCTTTTTG...................2370.570.000.000.000.000.57
...........................................................................TATCACAGTGGCTGGTCT........................1870.430.000.000.000.000.43
...........................................................................TATCACAGTGGCTGTTCTTTTTG...................2370.430.430.000.000.000.00
...........................................................................TATCACAGTAGCTGTTCTTTT.....................2170.290.000.140.000.140.00
...........................................................................TATCACAGTGGCTGGTATTTTT....................2270.290.000.000.000.000.29
...........................................................................TATCACAGTGGCTGTTCTTTTTT...................2370.290.000.000.000.000.29
..........................................................................CTATCACAGTGGCTGGTCTT.......................2070.290.000.000.000.000.29
...........................................................................TATCACATTGGCTGTTCTTTTT....................2270.290.000.000.000.000.29
..........................................................................ATATCACAGTGGCTGGTCTTTT.....................2270.290.000.000.000.000.29
...........................................................................TATCACAGTGGCTGGTCTTTTTC...................2370.290.000.000.000.000.29
...........................................................................TATCACAGTGCCTGTTCTTTTT....................2270.290.000.290.000.000.00
...........................................................................TATCACAGTGGCCGTTCTTTTT....................2270.290.000.000.000.000.29
...........................................................................TATCACAGTGGCTxTTCTTTTT....................2170.290.000.000.000.000.29
...........................................................................TATCACAGTGGCTAATCTTTTT....................2270.290.000.290.000.000.00
.........................GGAAACCGCTGCCGCTGA..........................................................................1830.330.000.000.000.000.33
...........................................................................TATCACAGCGGCTGGTCTTT......................2070.140.000.000.000.000.14
...........................................................................TATCACGGTGGCTGGTCTTTTT....................2270.140.000.140.000.000.00
...........................................................................TATCACAGTGGCTTTTCTTTTT....................2270.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTxTTCTTTTTG...................2270.140.000.000.000.000.14
...........................................................................TATCACAGTTGCTGTTCTTTTT....................2280.130.000.130.000.000.00
............................................................................ATCACAGTGGCTGGTCTTTTT....................2170.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGGTGTT.......................1970.140.000.140.000.000.00
..........................................................................ATATCACAGTGGCTGGTTTTTTT....................2370.140.000.000.000.000.14
...........................................................................TATCACAGCGGCTGGTCTTTT.....................2170.140.000.000.000.000.14
............................................................................ATCACAGTGGCTGGTCTTTTTT...................2270.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTxTTCTTTT.....................2070.140.000.000.000.000.14
...........................................................................TATCACxxTGGCTGTTCTTTTT....................2070.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGGTCGTTTT....................2270.140.000.140.000.000.00
...........................................................................TATCGCAGTGGCTGGTCTTTTT....................2270.140.000.000.000.000.14
...........................................................................TATCACAGTGCCTGGTCTTT......................2070.140.000.000.000.140.00
........................AGGGAACCGCTGCTGCTGATATAA.....................................................................2430.330.000.000.000.000.33
...........................................................................TATCACAGTGGCTTTTCTT.......................1970.140.000.000.000.000.14
..................AACCGCAGGGTACCGTTGCT...............................................................................2020.500.000.500.000.000.00
...........................................................................TATCACAGTGGCCGGTCTTTTT....................2270.140.000.140.000.000.00
...........................................................................TATCACAGTGGCTGAGCTTTTT....................2270.140.000.000.000.140.00
...........................................................................TATCACGGTGGCTGTTCTTT......................2070.140.000.140.000.000.00
...........................................................................TATCACAGTGGCTTTTCT........................1870.140.000.000.000.000.14
...........................................................................TATCACAGTGGCCGTTCTTTT.....................2170.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGGTCCT.......................1970.140.000.140.000.000.00
...........................................................................TATCACGGTGGCTGTTCTTTT.....................2170.140.000.140.000.000.00
........................AGGGAACCGCTGCTGCTGATA........................................................................2130.330.000.330.000.000.00
...........................................................................TATCACxxTGGCTGTTCTTTT.....................1970.140.000.000.000.000.14
...........................................................................TATCACAGGGGCTGTTCTTTTTT...................2370.140.000.140.000.000.00
...........................................................................TATCACAGTGACTGTTCTTTT.....................2170.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGGTCTTTTTG...................2370.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGGTATTTT.....................2170.140.000.000.000.000.14
...........................................................................TACCACAGTGGCTGGTCTTTTT....................2270.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGGGCTTT......................2070.140.000.140.000.000.00
............................................................................ATCACAGTGGCTGGTCTTTTTG...................2270.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGTTCTTC......................2070.140.000.000.000.000.14
..........................................................................ATATCACAGTGGCTGGTTTTTT.....................2270.140.000.000.000.000.14
...........................................................................TATCACATTGACTGTTCTTTTT....................2270.140.000.000.000.000.14
...........................................................................TATCACATTGGCTGTTCTTTT.....................2170.140.000.000.000.000.14
...........................................................................TATCACATTGGCTGTTTTTTTT....................2270.140.000.000.000.000.14
...........................................................................TATCACAGTGGCTGGTGTTT......................2070.140.000.000.000.000.14
3 super_2:8906769-8906880 + 55.74
TAACCATGCCG----TTTTT--AACCCAAGGGAACTTCTGCTGCTGATATATT------ATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATT--CCAA
TCACCAAATTGAAAATTGTTCAAAAAGAAGGGAACGGTTGCTGCTGATGTAGTTCAAGTTTCGCACAATT--TATATCACAGTGGCTGTTCTTTTTTGTTT----GCCAATCGATCAA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
..........................................................................TATCACAGTGGCTGGTCTTTTT......................22758.140.140.000.000.0058.00
..........................................................................TATCACAGTGGCTGGTTTTTTT......................22742.000.000.000.000.0042.00
..........................................................................TATCACAGTGGCTGGTCTTTT.......................21735.860.140.290.000.0035.43
..........................................................................TATCACAGTGGCTGGTTTTTT.......................21711.000.000.000.000.0011.00
..........................................................................TATCACAGTGGCTGGTCTTT........................2077.140.140.000.000.007.00
..........................................................................TATCACAGTGGCTGGTCTTTTTT.....................2374.860.000.000.000.004.86
..........................................................................TATCACAGTGGCTGGTGTTTTT......................2274.570.000.000.000.004.57
..........................................................................TATCACAGTGGCTGTTCTTTTT......................2273.572.140.000.000.141.29
..........................................................................TATCACAGTGGCTGGTTTTTTTT.....................23212.500.000.000.000.0012.50
............................AGGGAACGGTTGCTGCTGATGTA...................................................................2327.500.005.500.000.002.00
..........................................................................TATCACAGTGGCTGTTCTTTT.......................2171.860.710.000.000.001.14
..........................................................................TATCACATTGGCTGGTCTTTTT......................2271.570.000.000.000.001.57
..........................................................................TATCACAGTGGCTGGTTTTT........................2071.140.000.000.000.001.14
..........................................................................TATCACAGTGACTGTTCTTTTT......................2271.140.000.710.000.140.29
..........................................................................TATCACAGTGGCTGGGCTTTTT......................2271.140.000.000.000.001.14
..........................................................................TATCACAGTGGCTGTTCTTT........................2071.000.140.000.000.000.86
............................AGGGAACTGTTGCTGCTGATATA...................................................................2351.400.000.000.000.001.40
..........................................................................TATCACAGTGGCTGGTGTTTT.......................2170.860.000.140.000.140.57
..........................................................................TATCACAGTGGCTGGTCTT.........................1970.710.000.140.000.000.57
..........................................................................TATCACAGTGGCTGTTTTTTTT......................2280.630.250.000.000.000.38
..........................................................................TATCACAGTGGCTGGTCTTTTTTT....................2441.000.000.000.000.001.00
............................AGGGAACGGTTGCTGCTGATG.....................................................................2122.000.001.000.000.500.50
..........................................................................TATCACAGTAGCTGTTCTTTTT......................2270.570.000.570.000.000.00
..........................................................................TATCACAGTGGCTTTTCTTTTTG.....................2370.570.000.000.000.000.57
..................................CGGTTGCTGTTGATGTCG..................................................................1840.750.000.000.000.000.75
..........................................................................TATCACAGTGGCTGGTCT..........................1870.430.000.000.000.000.43
..........................................................................TATCACAGTGGCTGTTCTTTTTG.....................2370.430.430.000.000.000.00
............................AGGGAACGGTTGCTCCTGATGTA...................................................................2321.500.000.000.000.001.50
..........................................................................TATCACAGTGGCTxTTCTTTTT......................2170.290.000.000.000.000.29
.........................................................................CTATCACAGTGGCTGGTCTT.........................2070.290.000.000.000.000.29
..........................................................................TATCACATTGGCTGTTCTTTTT......................2270.290.000.000.000.000.29
..........................................................................TATCACAGTAGCTGTTCTTTT.......................2170.290.000.140.000.140.00
.........................................................................ATATCACAGTGGCTGGTCTTTT.......................2270.290.000.000.000.000.29
..........................................................................TATCACAGTGCCTGTTCTTTTT......................2270.290.000.290.000.000.00
............................AGTGAACGGTTGCTGCTGATG.....................................................................2121.000.000.000.000.001.00
..........................................................................TATCACAGTGGCTGTTCTTTTTT.....................2370.290.000.000.000.000.29
............................AGGGAACGGTTGCTGCTGATGTAA..................................................................2421.000.001.000.000.000.00
..........................................................................TATCACAGTGGCTAATCTTTTT......................2270.290.000.290.000.000.00
..........................................................................TATCACAGTGGCTGGTATTTTT......................2270.290.000.000.000.000.29
....................................GTTGCTGCGGATGGAGTTC...............................................................1921.001.000.000.000.000.00
..........................................................................TATCACAGTGGCCGTTCTTTTT......................2270.290.000.000.000.000.29
..........................................................................TATCACAGTGGCTGGTCTTTTTC.....................2370.290.000.000.000.000.29
..........................................................................TATCACAGCGGCTGGTCTTTT.......................2170.140.000.000.000.000.14
...........................AAGGGAACGATTGCTGGT.........................................................................1820.500.000.000.000.500.00
..........................................................................TATCGCAGTGGCTGGTCTTTTT......................2270.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTGGTCCT.........................1970.140.000.140.000.000.00
...........................................................................ATCACAGTGGCTGGTCTTTTTT.....................2270.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTGGTCTTTTTTTTT..................2620.500.000.500.000.000.00
..........................................................................TATCACAGTTGCTGTTCTTTTT......................2280.130.000.130.000.000.00
..........................................................................TATCACAGTGGCTTTTCTT.........................1970.140.000.000.000.000.14
..........................................................................TATCACxxTGGCTGTTCTTTT.......................1970.140.000.000.000.000.14
..........................................................................TATCACxxTGGCTGTTCTTTTT......................2070.140.000.000.000.000.14
............................AGGGAACGGTTGCTGCTGATGTAGT.................................................................2520.500.000.500.000.000.00
..........................................................................TATCACGGTGGCTGTTCTTTT.......................2170.140.000.140.000.000.00
..........................................................................TATCACGGTGGCTGGTCTTTTT......................2270.140.000.140.000.000.00
.........................................................................ATATCACAGTGGCTGGTTTTTT.......................2270.140.000.000.000.000.14
..........................................................................TATCACATTGGCTGTTCTTTT.......................2170.140.000.000.000.000.14
..........................................................................TATCACATTGGCTGTTTTTTTT......................2270.140.000.000.000.000.14
..........................................................................TATCACAGTGCCTGGTCTTT........................2070.140.000.000.000.140.00
............................AGGGAACGGTTGCTGCTGCTCTA...................................................................2320.500.000.000.000.500.00
..........................................................................TATCACAGTGGCTGTTCTTC........................2070.140.000.000.000.000.14
............................AGGGACCGGTTGGTGCTGATGTA...................................................................2320.500.000.500.000.000.00
...........................................................................ATCACAGTGGCTGGTCTTTTTG.....................2270.140.000.000.000.000.14
..........................................................................TATCACAGTGGCCGTTCTTTT.......................2170.140.000.000.000.000.14
............................AGGGAACGGTTGCTGATGATGTA...................................................................2320.500.500.000.000.000.00
...........................................................................ATCACAGTGGCTGGTCTTTTT......................2170.140.000.000.000.000.14
..........................................................................TATCACGGTGGCTGTTCTTT........................2070.140.000.140.000.000.00
..........................................................................TATCACAGTGGCTGGGCTTTTTT.....................2320.500.000.000.000.000.50
..........................................................................TATCACAGTGGCTGGTCGTTTT......................2270.140.000.140.000.000.00
..........................................................................TATCACAGTGGCTGGTGTTTTTT.....................2320.500.000.000.000.000.50
..........................................................................TATCACAGTGGCTGAGCTTTTT......................2270.140.000.000.000.140.00
..........................................................................TATCACAGCGGCTGGTCTTT........................2070.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTGGTATTTT.......................2170.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTTTTCT..........................1870.140.000.000.000.000.14
.........................................................................ATATCACAGTGGCTGGTTTTTTT......................2370.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTxTTCTTTT.......................2070.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTTTTCTTTTT......................2270.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTGGTATTTTTT.....................2320.500.000.000.000.000.50
..........................................................................TATCACAGTGACTGTTCTTTT.......................2170.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTGGTGTTT........................2070.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTGGTCTTTTTG.....................2370.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTxTTCTTTTTG.....................2270.140.000.000.000.000.14
..........................................................................TACCACAGTGGCTGGTCTTTTT......................2270.140.000.000.000.000.14
..........................................................................TATCACAGTGGCTGGGCTTT........................2070.140.000.140.000.000.00
..........................................................................TATCACAGTGGCCGGTCTTTTT......................2270.140.000.140.000.000.00
..........................................................................TATCACATTGACTGTTCTTTTT......................2270.140.000.000.000.000.14
............................AGGGAACGGTTGCTGCTGATGT....................................................................2220.500.000.500.000.000.00
..........................................................................TATCACAGTGGCTGGTGTT.........................1970.140.000.140.000.000.00
..........................................................................TATCACAGGGGCTGTTCTTTTTT.....................2370.140.000.140.000.000.00
2 super_2:8906467-8906589 + 43.47
TAACCATGCCGT----------------TTTTAACCCAAGGGAACTTCTGCTGCTGATATAT-TATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGT--TGCACGGCCAAT--TCCAA
ACACTCAGCGATGGAGACCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTG-TGCTATATGTCCTTCGACTCTA-TATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGCCAAACAGCCAA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
...............................................................................TATCACAGTGGCTGGTCTTTTT........................22758.140.140.000.000.0058.00
...............................................................................TATCACAGTGGCTGGTTTTTTT........................22742.000.000.000.000.0042.00
...............................................................................TATCACAGTGGCTGGTCTTTT.........................21735.860.140.290.000.0035.43
......................................AGAGAATAGTTGCTG-TGCTATA................................................................22253.000.0052.500.000.000.50
...............................................................................TATCACAGTGGCTGGTTTTTT.........................21711.000.000.000.000.0011.00
......................................AGAGAATAGTTGCTG-TGCTAT.................................................................21226.501.0022.500.001.501.50
...............................................................................TATCACAGTGGCTGGTCTTT..........................2077.140.140.000.000.007.00
...............................................................................TATCACAGTGGCTGGTCTTTTTT.......................2374.860.000.000.000.004.86
...............................................................................TATCACAGTGGCTGGTGTTTTT........................2274.570.000.000.000.004.57
...............................................................................TATCACAGTGGCTGTTCTTTTT........................2273.572.140.000.000.141.29
......................................AGAGAATAGTTGCTG-TGCTATAT...............................................................2327.000.007.000.000.000.00
...............................................................................TATCACAGTGGCTGTTCTTTT.........................2171.860.710.000.000.001.14
...............................................................................TATCACATTGGCTGGTCTTTTT........................2271.570.000.000.000.001.57
...............................................................................TATCACAGTGGCTGGTTTTT..........................2071.140.000.000.000.001.14
...............................................................................TATCACAGTGACTGTTCTTTTT........................2271.140.000.710.000.140.29
...............................................................................TATCACAGTGGCTGGGCTTTTT........................2271.140.000.000.000.001.14
...............................................................................TATCACAGTGGCTGTTCTTT..........................2071.000.140.000.000.000.86
...............................................................................TATCACAGTGGCTGGTGTTTT.........................2170.860.000.140.000.140.57
......................................AGAGAATAGTTGCTG-TGCTA..................................................................2022.500.001.500.000.001.00
...............................................................................TATCACAGTGGCTGTTTTTTTT........................2280.630.250.000.000.000.38
...............................................................................TATCACAGTGGCTGGTCTT...........................1970.710.000.140.000.000.57
...............................................................................TATCACAGTAGCTGTTCTTTTT........................2270.570.000.570.000.000.00
...............................................................................TATCACAGTGGCTTTTCTTTTTG.......................2370.570.000.000.000.000.57
...............................................................................TATCACAGTGGCTGGTCTTTTTTT......................2441.000.000.000.000.001.00
...............................................................................TATCACAGTGGCTGTTCTTTTTG.......................2370.430.430.000.000.000.00
...............................................................................TATCACAGTGGCTGGTCT............................1870.430.000.000.000.000.43
.......................................GAGAATAGTTGCTG-TGCTAT.................................................................2021.500.001.500.000.000.00


droWil1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_180701:1650986-1651094 - 58.93
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTA-------TTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TTTCATTTTTTGTTTAAAAAGAAGGGAACGGTTGCTGTTGATGTAGTATACCATTTTGTTTAAC-AATATATCACAGTGGCTGTTCTTTTTTGTTTAACAATCAAT--CAA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.....................................................................TATCACAGTGGCTGTTCTTTTT....................22812957.500.0012956.880.630.00
.....................................................................TATCACAGTGGCTGTTCTTTT.....................2183038.380.133038.000.250.00
.....................................................................TATCACAGTGGCTGTTCTTT......................208430.880.63430.130.130.00
.....................................................................TATCACAGTGGCTGTTCTTTTTA...................238411.000.00411.000.000.00
.....................................................................TATCACAGTGGCTGGTCTTTTT....................228215.750.00214.001.500.25
.....................................................................TATCACAGTGGCTGTTCTTTTTT...................238193.250.00193.130.130.00
.....................................................................TATCACAGTGGCTGTTCTT.......................198119.250.00118.750.500.00
......................AGGGAACGGTTGCTGTTGATGTA..................................................................232420.500.00420.500.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTTAA..................24880.750.0080.750.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTA....................22870.630.0070.630.000.00
.....................................................................TATCACAGTGGCTGTTCT........................18847.750.0047.750.000.00
.....................................................................TATCACAGCGGCTGTTCTTTTT....................22834.250.0034.250.000.00
.....................................................................TATCACAGTGGCTxTTCTTTTT....................21833.380.0033.250.130.00
.....................................................................TATCACAGTGGATGTTCTTTTT....................22830.000.0030.000.000.00
.....................................................................TATCACAGTGGCTGGTCTTTT.....................21828.380.0027.380.500.50
.....................................................................TATCACAGTGGCTGCTCTTTTT....................22827.000.0027.000.000.00
.....................................................................TATCACAGTGGCTGTTTTTTTT....................221021.500.0021.400.100.00
.....................................................................TATCACAGTGGCTGTTCCTTTT....................221021.300.0021.300.000.00
.....................................................................TATCACAGTTGCTGTTCTTTTT....................221019.400.0019.400.000.00
.....................................................................TATCACAGTGTCTGTTCTTTTT....................22824.000.0024.000.000.00
.....................................................................TATCACAGTGGCTTTTCTTTTT....................22821.880.0021.880.000.00
.....................................................................TATAACAGTGGCTGTTCTTTTT....................22821.250.0021.250.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTTG...................23820.130.0020.130.000.00
.....................................................................TATCACAGTGGCTGTTATTTTT....................22818.880.0018.880.000.00
.........................................................................ACAGTGGCTGTTCTTTTT....................18816.750.0016.750.000.00
.....................................................................TATCACAGTGGCTGTTCTCTTT....................22816.000.0016.000.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTAA...................23815.630.0015.630.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTC....................22815.000.0015.000.000.00
.....................................................................TATCACAGTxGCTGTTCTTTTT....................21814.750.0014.630.130.00
.....................................................................TATCACATTGGCTGTTCTTTTT....................22814.130.0014.130.000.00
.....................................................................TATCACGGTGGCTGTTCTTTTT....................22813.250.0013.250.000.00
....................................................................CTATCACAGTGGCTGTTCTTTTT....................23812.380.0012.380.000.00
.....................................................................TATCACAGTGGCTGTCCTTTTT....................22812.250.0012.250.000.00
.....................................................................TATCGCAGTGGCTGTTCTTTTT....................22812.250.0012.250.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTTC...................23812.130.0012.130.000.00
.....................................................................TATCACAGTCGCTGTTCTTTTT....................22811.380.0011.250.130.00
.....................................................................TATCACAGTAGCTGTTCTTTTT....................22811.250.0011.250.000.00
.....................................................................TATCACAGTGGCCGTTCTTTTT....................22811.000.0011.000.000.00
.....................................................................TACCACAGTGGCTGTTCTTTTT....................22810.880.0010.880.000.00
......................AGGGAACGGTTGCTGTTGATGT...................................................................22242.500.0042.500.000.00
.....................................................................CATCACAGTGGCTGTTCTTTTT....................22810.380.0010.380.000.00
.....................................................................TATCACACTGGCTGTTCTTTTT....................2289.000.009.000.000.00
.....................................................................TATCACAGTGCCTGTTCTTTTT....................2288.750.008.750.000.00
.....................................................................TATCACAGTGGCTxTTCTTTT.....................2088.630.008.500.130.00
......................................................................ATCACAGTGGCTGTTCTTTTT....................2188.500.008.500.000.00
.....................................................................TATCACAGTGGCTGTTCTTCTT....................2288.130.008.130.000.00
.....................................................................TATCACAGTGGCTGTTCCTTT.....................21106.500.006.400.100.00
.....................................................................TATCACAGTGGCTGTTCTTTCT....................2287.750.007.750.000.00
.....................................................................TATCACAGTGGCxxTTCTTTTT....................2087.630.007.630.000.00
.....................................................................TATCACAGTGGATGTTCTTTT.....................2187.130.007.130.000.00
.....................................................................TATCACAGCGGCTGTTCTTTT.....................2187.130.007.130.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTG....................2287.000.007.000.000.00
.....................................................................TATCACAGTTGCTGTTCTTTT.....................21105.400.005.400.000.00
......................AGGGAACGGTTGCTGTTGATG....................................................................21227.000.0027.000.000.00
.....................................................................TATTACAGTGGCTGTTCTTTTT....................2286.630.006.630.000.00
.....................................................................TATCACAGTGTCTGTTCTTTT.....................2186.130.006.130.000.00
.....................................................................TATCACAGTGACTGTTCTTTTT....................2286.130.006.130.000.00
.....................................................................TATCACAGTGGCTATTCTTTTT....................2286.000.006.000.000.00
.....................................................................TATCACAGTGGCTGATCTTTTT....................2286.000.006.000.000.00
.....................................................................TGTCACAGTGGCTGTTCTTTTT....................2285.880.005.880.000.00
.....................................................................TATCATAGTGGCTGTTCTTTTT....................2285.880.005.880.000.00
.....................................................................TATCACAGTGGCTGCTCTTTT.....................2185.630.005.630.000.00
.....................................................................TATCACATTGGCTGTTCTTTT.....................2185.250.005.250.000.00
.....................................................................TATCACAGTGGCTCTTCTTTTT....................2285.250.005.130.130.00
.......................................................................TATCAGTGGCTGTTCTTTTT....................2085.130.005.130.000.00
.....................................................................TATCCCAGTGGCTGTTCTTTTT....................2285.000.005.000.000.00
.....................................................................TATCACAATGGCTGTTCTTTTT....................2285.000.005.000.000.00
.....................................................................TATCACAGTGGTTGTTCTTTTT....................2284.880.004.880.000.00
.....................................................................TATCACAGTGGCTGTTATTTT.....................2184.750.004.750.000.00
.....................................................................TATCACCGTGGCTGTTCTTTTT....................2284.500.004.500.000.00
.....................................................................TATAACAGTGGCTGTTCTTTT.....................2184.000.004.000.000.00
.....................................................................TATCACAGTGGCTGGTCTTTTTA...................2384.000.004.000.000.00
.....................................................................TATCACAGTGGCTGGTCTTT......................2083.880.003.630.000.25
.....................................................................TATCACAGTGGCTTTTCTTTT.....................2183.880.003.880.000.00
......................AGGGAACGGTTGCTGTTGATGTAA.................................................................24215.500.0015.500.000.00
....................................................................CTATCACAGTGGCTGTTCTTTT.....................2283.880.003.880.000.00
.....................................................................TATCGCAGTGGCTGTTCTTTT.....................2183.750.003.750.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTTTA..................2483.750.003.750.000.00
.....................................................................TATCACAGTGGCTGGTCTTTTTT...................2383.630.003.380.130.13
.....................................................................TATCACAGTGGCTGTTCTTTA.....................2183.380.003.380.000.00
.....................................................................TCTCACAGTGGCTGTTCTTTTT....................2283.380.003.380.000.00
.....................................................................GATCACAGTGGCTGTTCTTTTT....................2283.250.003.250.000.00
....................................................................ATATCACAGTGGCTGTTCTTTT.....................2283.250.003.250.000.00
.....................................................................TATCACAGTxGCTGTTCTTTT.....................2083.130.003.130.000.00
.....................................................................TATCACAGTGGCCGTTCTTTT.....................2183.130.003.130.000.00
.....................................................................TATCACAGTGGCTGTTTTTTT.....................21102.400.002.400.000.00
.....................................................................TATCACAGAGGCTGTTCTTTTT....................2283.000.003.000.000.00
.....................................................................TACCACAGTGGCTGTTCTTTT.....................2182.880.002.880.000.00
.....................................................................TATCACGGTGGCTGTTCTTTT.....................2182.880.002.880.000.00
.....................................................................CATCACAGTGGCTGTTCTTTT.....................2182.880.002.880.000.00
.....................................................................TATCACAGTGGCTGGTTTTTTT....................2282.750.001.750.500.50
.....................................................................TATCACAGTGGCTGTTGTTTTT....................2282.750.002.750.000.00
.....................................................................TAACACAGTGGCTGTTCTTTTT....................2282.750.002.750.000.00
.....................................................................TATCAAAGTGGCTGTTCTTTTT....................2282.630.002.630.000.00
.....................................................................TATCACAGTGGCTGTTCTCTT.....................2182.500.002.500.000.00
.....................................................................TATCACAGTGGCTGTTCTTTTTTT..................2482.500.002.500.000.00
.....................................................................TATCACAGGGGCTGTTCTTTTT....................2282.380.002.380.000.00
.......................................................................TCACAGTGGCTGTTCTTTTT....................2082.380.002.380.000.00
........................................................................CACAGTGGCTGTTCTTTTT....................1982.250.002.250.000.00
.....................................................................TATCACAGTGCCTGTTCTTTT.....................2182.250.002.130.130.00
.....................................................................TATTACAGTGGCTGTTCTTTT.....................2182.250.002.250.000.00
4 scaffold_180701:1651301-1651408 - 49.21
TAACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATAT----TATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGC------------ACGGCCAATTCCAA
CAGCC-------TTTAAAGTAGAGAGAATAGTTGCTG-TGTTTTATGCCCTTTTCA----ATTTCATATCACAGTGGCTGTTCTTTTTGTGCCTAAAGTGCCCCACAACAACAACAACAA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
..................................................................TATCACAGTGGCTGTTCTTTTT................................22812957.500.0012956.880.630.00
..................................................................TATCACAGTGGCTGTTCTTTT.................................2183038.380.133038.000.250.00
..................................................................TATCACAGTGGCTGTTCTTT..................................208430.880.63430.130.130.00
..................................................................TATCACAGTGGCTGTTCTTTTTA...............................238411.000.00411.000.000.00
..................................................................TATCACAGTGGCTGGTCTTTTT................................228215.750.00214.001.500.25
..................................................................TATCACAGTGGCTGTTCTTTTTT...............................238193.250.00193.130.130.00
..................................................................TATCACAGTGGCTGTTCTT...................................198119.250.00118.750.500.00
..................................................................TATCACAGTGGCTGTTCTTTTTAA..............................24880.750.0080.750.000.00
..................................................................TATCACAGTGGCTGTTCTTTTA................................22870.630.0070.630.000.00
..................................................................TATCACAGTGGCTGTTCT....................................18847.750.0047.750.000.00
......................AGAGAATAGTTGCTG-TGTTTTATG.........................................................................243126.330.00126.330.000.00
..................................................................TATCACAGCGGCTGTTCTTTTT................................22834.250.0034.250.000.00
..................................................................TATCACAGTGGCTxTTCTTTTT................................21833.380.0033.250.130.00
..................................................................TATCACAGTGGATGTTCTTTTT................................22830.000.0030.000.000.00
..................................................................TATCACAGTGGCTGGTCTTTT.................................21828.380.0027.380.500.50
..................................................................TATCACAGTGGCTGCTCTTTTT................................22827.000.0027.000.000.00
..................................................................TATCACAGTGGCTGTTTTTTTT................................221021.500.0021.400.100.00
..................................................................TATCACAGTGGCTGTTCCTTTT................................221021.300.0021.300.000.00
..................................................................TATCACAGTTGCTGTTCTTTTT................................221019.400.0019.400.000.00
..................................................................TATCACAGTGTCTGTTCTTTTT................................22824.000.0024.000.000.00
..................................................................TATCACAGTGGCTTTTCTTTTT................................22821.880.0021.880.000.00
..................................................................TATAACAGTGGCTGTTCTTTTT................................22821.250.0021.250.000.00
..................................................................TATCACAGTGGCTGTTCTTTTTG...............................23820.130.0020.130.000.00
..................................................................TATCACAGTGGCTGTTATTTTT................................22818.880.0018.880.000.00
......................................................................ACAGTGGCTGTTCTTTTT................................18816.750.0016.750.000.00
..................................................................TATCACAGTGGCTGTTCTCTTT................................22816.000.0016.000.000.00
..................................................................TATCACAGTGGCTGTTCTTTTAA...............................23815.630.0015.630.000.00
..................................................................TATCACAGTGGCTGTTCTTTTC................................22815.000.0015.000.000.00
..................................................................TATCACAGTxGCTGTTCTTTTT................................21814.750.0014.630.130.00
..................................................................TATCACATTGGCTGTTCTTTTT................................22814.130.0014.130.000.00
..................................................................TATCACGGTGGCTGTTCTTTTT................................22813.250.0013.250.000.00
.................................................................CTATCACAGTGGCTGTTCTTTTT................................23812.380.0012.380.000.00
..................................................................TATCGCAGTGGCTGTTCTTTTT................................22812.250.0012.250.000.00
..................................................................TATCACAGTGGCTGTCCTTTTT................................22812.250.0012.250.000.00
..................................................................TATCACAGTGGCTGTTCTTTTTC...............................23812.130.0012.130.000.00
..................................................................TATCACAGTCGCTGTTCTTTTT................................22811.380.0011.250.130.00
..................................................................TATCACAGTAGCTGTTCTTTTT................................22811.250.0011.250.000.00
..................................................................TATCACAGTGGCCGTTCTTTTT................................22811.000.0011.000.000.00
..................................................................TACCACAGTGGCTGTTCTTTTT................................22810.880.0010.880.000.00
..................................................................CATCACAGTGGCTGTTCTTTTT................................22810.380.0010.380.000.00
..................................................................TATCACACTGGCTGTTCTTTTT................................2289.000.009.000.000.00
..................................................................TATCACAGTGCCTGTTCTTTTT................................2288.750.008.750.000.00
..................................................................TATCACAGTGGCTxTTCTTTT.................................2088.630.008.500.130.00
...................................................................ATCACAGTGGCTGTTCTTTTT................................2188.500.008.500.000.00
..................................................................TATCACAGTGGCTGTTCCTTT.................................21106.500.006.400.100.00
..................................................................TATCACAGTGGCTGTTCTTCTT................................2288.130.008.130.000.00
..................................................................TATCACAGTGGCTGTTCTTTCT................................2287.750.007.750.000.00
..................................................................TATCACAGTGGCxxTTCTTTTT................................2087.630.007.630.000.00
..................................................................TATCACAGTGGATGTTCTTTT.................................2187.130.007.130.000.00
..................................................................TATCACAGCGGCTGTTCTTTT.................................2187.130.007.130.000.00
..................................................................TATCACAGTGGCTGTTCTTTTG................................2287.000.007.000.000.00
..................................................................TATCACAGTTGCTGTTCTTTT.................................21105.400.005.400.000.00
..................................................................TATTACAGTGGCTGTTCTTTTT................................2286.630.006.630.000.00
..................................................................TATCACAGTGACTGTTCTTTTT................................2286.130.006.130.000.00
..................................................................TATCACAGTGTCTGTTCTTTT.................................2186.130.006.130.000.00
..................................................................TATCACAGTGGCTGATCTTTTT................................2286.000.006.000.000.00
..................................................................TATCACAGTGGCTATTCTTTTT................................2286.000.006.000.000.00
..................................................................TATCATAGTGGCTGTTCTTTTT................................2285.880.005.880.000.00
..................................................................TGTCACAGTGGCTGTTCTTTTT................................2285.880.005.880.000.00
..................................................................TATCACAGTGGCTGCTCTTTT.................................2185.630.005.630.000.00
......................AGAGAATAGTTGCTG-TGTTTT............................................................................21315.000.0015.000.000.00
..................................................................TATCACAGTGGCTCTTCTTTTT................................2285.250.005.130.130.00
..................................................................TATCACATTGGCTGTTCTTTT.................................2185.250.005.250.000.00
....................................................................TATCAGTGGCTGTTCTTTTT................................2085.130.005.130.000.00
..................................................................TATCACAATGGCTGTTCTTTTT................................2285.000.005.000.000.00
..................................................................TATCCCAGTGGCTGTTCTTTTT................................2285.000.005.000.000.00
..................................................................TATCACAGTGGTTGTTCTTTTT................................2284.880.004.880.000.00
..................................................................TATCACAGTGGCTGTTATTTT.................................2184.750.004.750.000.00
..................................................................TATCACCGTGGCTGTTCTTTTT................................2284.500.004.500.000.00
..................................................................TATCACAGTGGCTGGTCTTTTTA...............................2384.000.004.000.000.00
..................................................................TATAACAGTGGCTGTTCTTTT.................................2184.000.004.000.000.00
..................................................................TATCACAGTGGCTGGTCTTT..................................2083.880.003.630.000.25
..................................................................TATCACAGTGGCTTTTCTTTT.................................2183.880.003.880.000.00
.................................................................CTATCACAGTGGCTGTTCTTTT.................................2283.880.003.880.000.00
..................................................................TATCACAGTGGCTGTTCTTTTTTA..............................2483.750.003.750.000.00
..................................................................TATCGCAGTGGCTGTTCTTTT.................................2183.750.003.750.000.00
..................................................................TATCACAGTGGCTGGTCTTTTTT...............................2383.630.003.380.130.13
..................................................................TATCACAGTGGCTGTTCTTTA.................................2183.380.003.380.000.00
..................................................................TCTCACAGTGGCTGTTCTTTTT................................2283.380.003.380.000.00
..................................................................GATCACAGTGGCTGTTCTTTTT................................2283.250.003.250.000.00
.................................................................ATATCACAGTGGCTGTTCTTTT.................................2283.250.003.250.000.00
..................................................................TATCACAGTGGCCGTTCTTTT.................................2183.130.003.130.000.00
..................................................................TATCACAGTxGCTGTTCTTTT.................................2083.130.003.130.000.00
..................................................................TATCACAGTGGCTGTTTTTTT.................................21102.400.002.400.000.00
..................................................................TATCACAGAGGCTGTTCTTTTT................................2283.000.003.000.000.00
..................................................................TATCACGGTGGCTGTTCTTTT.................................2182.880.002.880.000.00
..................................................................TACCACAGTGGCTGTTCTTTT.................................2182.880.002.880.000.00
..................................................................CATCACAGTGGCTGTTCTTTT.................................2182.880.002.880.000.00
..................................................................TAACACAGTGGCTGTTCTTTTT................................2282.750.002.750.000.00
..................................................................TATCACAGTGGCTGTTGTTTTT................................2282.750.002.750.000.00
..................................................................TATCACAGTGGCTGGTTTTTTT................................2282.750.001.750.500.50
..................................................................TATCAAAGTGGCTGTTCTTTTT................................2282.630.002.630.000.00
......................AGAGAATAGTTGCTG-TGTTTTATGA........................................................................2537.000.007.000.000.00
..................................................................TATCACAGTGGCTGTTCTCTT.................................2182.500.002.500.000.00
..................................................................TATCACAGTGGCTGTTCTTTTTTT..............................2482.500.002.500.000.00
..................................................................TATCACAGGGGCTGTTCTTTTT................................2282.380.002.380.000.00
....................................................................TCACAGTGGCTGTTCTTTTT................................2082.380.002.380.000.00
..................................................................TATTACAGTGGCTGTTCTTTT.................................2182.250.002.250.000.00
.....................................................................CACAGTGGCTGTTCTTTTT................................1982.250.002.250.000.00
..................................................................TATCACAGTGCCTGTTCTTTT.................................2182.250.002.130.130.00
..................................................................TATCACAGTGGCTGTTCTTCT.................................2182.250.002.250.000.00
3 scaffold_180701:1651131-1651259 - 49.04
TAACCATG--CCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATA------TTATTG-------------AAAAAC----TACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TTTTTAAAGTTTTTGTTTAACCGCAGGGAACTGTCGCTGCTGATATATATATATTATTGTTATATATAATTTAAAAATGATTTTCTATATCACAGTGGCTGTTCTTTTTGGTTTTACGATCATTTTCAA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.......................................................................................TATCACAGTGGCTGTTCTTTTT....................22812957.500.0012956.880.630.00
.......................................................................................TATCACAGTGGCTGTTCTTTT.....................2183038.380.133038.000.250.00
.......................................................................................TATCACAGTGGCTGTTCTTT......................208430.880.63430.130.130.00
.......................................................................................TATCACAGTGGCTGTTCTTTTTA...................238411.000.00411.000.000.00
.......................................................................................TATCACAGTGGCTGGTCTTTTT....................228215.750.00214.001.500.25
.......................................................................................TATCACAGTGGCTGTTCTTTTTT...................238193.250.00193.130.130.00
.......................................................................................TATCACAGTGGCTGTTCTT.......................198119.250.00118.750.500.00
.......................................................................................TATCACAGTGGCTGTTCTTTTTAA..................24880.750.0080.750.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTTA....................22870.630.0070.630.000.00
.......................................................................................TATCACAGTGGCTGTTCT........................18847.750.0047.750.000.00
........................AGGGAACTGTCGCTGCTGATATA..................................................................................233110.330.33110.000.000.00
.......................................................................................TATCACAGCGGCTGTTCTTTTT....................22834.250.0034.250.000.00
.......................................................................................TATCACAGTGGCTxTTCTTTTT....................21833.380.0033.250.130.00
.......................................................................................TATCACAGTGGATGTTCTTTTT....................22830.000.0030.000.000.00
.......................................................................................TATCACAGTGGCTGGTCTTTT.....................21828.380.0027.380.500.50
.......................................................................................TATCACAGTGGCTGCTCTTTTT....................22827.000.0027.000.000.00
.......................................................................................TATCACAGTGGCTGTTTTTTTT....................221021.500.0021.400.100.00
.......................................................................................TATCACAGTGGCTGTTCCTTTT....................221021.300.0021.300.000.00
.......................................................................................TATCACAGTTGCTGTTCTTTTT....................221019.400.0019.400.000.00
.......................................................................................TATCACAGTGTCTGTTCTTTTT....................22824.000.0024.000.000.00
.......................................................................................TATCACAGTGGCTTTTCTTTTT....................22821.880.0021.880.000.00
.......................................................................................TATAACAGTGGCTGTTCTTTTT....................22821.250.0021.250.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTTTG...................23820.130.0020.130.000.00
.......................................................................................TATCACAGTGGCTGTTATTTTT....................22818.880.0018.880.000.00
........................AGGGAACTGTCGCTGCTGATAT...................................................................................22345.000.0045.000.000.00
...........................................................................................ACAGTGGCTGTTCTTTTT....................18816.750.0016.750.000.00
.......................................................................................TATCACAGTGGCTGTTCTCTTT....................22816.000.0016.000.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTTAA...................23815.630.0015.630.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTTC....................22815.000.0015.000.000.00
.......................................................................................TATCACAGTxGCTGTTCTTTTT....................21814.750.0014.630.130.00
.......................................................................................TATCACATTGGCTGTTCTTTTT....................22814.130.0014.130.000.00
.......................................................................................TATCACGGTGGCTGTTCTTTTT....................22813.250.0013.250.000.00
......................................................................................CTATCACAGTGGCTGTTCTTTTT....................23812.380.0012.380.000.00
.......................................................................................TATCACAGTGGCTGTCCTTTTT....................22812.250.0012.250.000.00
.......................................................................................TATCGCAGTGGCTGTTCTTTTT....................22812.250.0012.250.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTTTC...................23812.130.0012.130.000.00
.......................................................................................TATCACAGTCGCTGTTCTTTTT....................22811.380.0011.250.130.00
.......................................................................................TATCACAGTAGCTGTTCTTTTT....................22811.250.0011.250.000.00
.......................................................................................TATCACAGTGGCCGTTCTTTTT....................22811.000.0011.000.000.00
.......................................................................................TACCACAGTGGCTGTTCTTTTT....................22810.880.0010.880.000.00
.......................................................................................CATCACAGTGGCTGTTCTTTTT....................22810.380.0010.380.000.00
.......................................................................................TATCACACTGGCTGTTCTTTTT....................2289.000.009.000.000.00
.......................................................................................TATCACAGTGCCTGTTCTTTTT....................2288.750.008.750.000.00
.......................................................................................TATCACAGTGGCTxTTCTTTT.....................2088.630.008.500.130.00
........................................................................................ATCACAGTGGCTGTTCTTTTT....................2188.500.008.500.000.00
.......................................................................................TATCACAGTGGCTGTTCTTCTT....................2288.130.008.130.000.00
.......................................................................................TATCACAGTGGCTGTTCCTTT.....................21106.500.006.400.100.00
.......................................................................................TATCACAGTGGCTGTTCTTTCT....................2287.750.007.750.000.00
........................AGGGAACTGTCGCTGCTGATA....................................................................................21320.330.0020.330.000.00
.......................................................................................TATCACAGTGGCxxTTCTTTTT....................2087.630.007.630.000.00
.......................................................................................TATCACAGTGGATGTTCTTTT.....................2187.130.007.130.000.00
.......................................................................................TATCACAGCGGCTGTTCTTTT.....................2187.130.007.130.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTTG....................2287.000.007.000.000.00
.......................................................................................TATCACAGTTGCTGTTCTTTT.....................21105.400.005.400.000.00
.......................................................................................TATTACAGTGGCTGTTCTTTTT....................2286.630.006.630.000.00
.......................................................................................TATCACAGTGTCTGTTCTTTT.....................2186.130.006.130.000.00
.......................................................................................TATCACAGTGACTGTTCTTTTT....................2286.130.006.130.000.00
.......................................................................................TATCACAGTGGCTATTCTTTTT....................2286.000.006.000.000.00
.......................................................................................TATCACAGTGGCTGATCTTTTT....................2286.000.006.000.000.00
.......................................................................................TATCATAGTGGCTGTTCTTTTT....................2285.880.005.880.000.00
.......................................................................................TGTCACAGTGGCTGTTCTTTTT....................2285.880.005.880.000.00
.......................................................................................TATCACAGTGGCTGCTCTTTT.....................2185.630.005.630.000.00
.......................................................................................TATCACAGTGGCTCTTCTTTTT....................2285.250.005.130.130.00
.......................................................................................TATCACATTGGCTGTTCTTTT.....................2185.250.005.250.000.00
.........................................................................................TATCAGTGGCTGTTCTTTTT....................2085.130.005.130.000.00
.......................................................................................TATCCCAGTGGCTGTTCTTTTT....................2285.000.005.000.000.00
.......................................................................................TATCACAATGGCTGTTCTTTTT....................2285.000.005.000.000.00
.......................................................................................TATCACAGTGGTTGTTCTTTTT....................2284.880.004.880.000.00
.......................................................................................TATCACAGTGGCTGTTATTTT.....................2184.750.004.750.000.00
.......................................................................................TATCACCGTGGCTGTTCTTTTT....................2284.500.004.500.000.00
.......................................................................................TATCACAGTGGCTGGTCTTTTTA...................2384.000.004.000.000.00
.......................................................................................TATAACAGTGGCTGTTCTTTT.....................2184.000.004.000.000.00
.......................................................................................TATCACAGTGGCTTTTCTTTT.....................2183.880.003.880.000.00
......................................................................................CTATCACAGTGGCTGTTCTTTT.....................2283.880.003.880.000.00
.......................................................................................TATCACAGTGGCTGGTCTTT......................2083.880.003.630.000.25
.......................................................................................TATCACAGTGGCTGTTCTTTTTTA..................2483.750.003.750.000.00
.......................................................................................TATCGCAGTGGCTGTTCTTTT.....................2183.750.003.750.000.00
.......................................................................................TATCACAGTGGCTGGTCTTTTTT...................2383.630.003.380.130.13
.......................................................................................TCTCACAGTGGCTGTTCTTTTT....................2283.380.003.380.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTA.....................2183.380.003.380.000.00
.......................................................................................GATCACAGTGGCTGTTCTTTTT....................2283.250.003.250.000.00
......................................................................................ATATCACAGTGGCTGTTCTTTT.....................2283.250.003.250.000.00
.......................................................................................TATCACAGTGGCCGTTCTTTT.....................2183.130.003.130.000.00
.......................................................................................TATCACAGTxGCTGTTCTTTT.....................2083.130.003.130.000.00
.......................................................................................TATCACAGAGGCTGTTCTTTTT....................2283.000.003.000.000.00
.......................................................................................TATCACAGTGGCTGTTTTTTT.....................21102.400.002.400.000.00
.......................................................................................TATCACGGTGGCTGTTCTTTT.....................2182.880.002.880.000.00
.......................................................................................CATCACAGTGGCTGTTCTTTT.....................2182.880.002.880.000.00
.......................................................................................TACCACAGTGGCTGTTCTTTT.....................2182.880.002.880.000.00
.......................................................................................TAACACAGTGGCTGTTCTTTTT....................2282.750.002.750.000.00
.......................................................................................TATCACAGTGGCTGTTGTTTTT....................2282.750.002.750.000.00
.......................................................................................TATCACAGTGGCTGGTTTTTTT....................2282.750.001.750.500.50
.......................................................................................TATCAAAGTGGCTGTTCTTTTT....................2282.630.002.630.000.00
.......................................................................................TATCACAGTGGCTGTTCTCTT.....................2182.500.002.500.000.00
.......................................................................................TATCACAGTGGCTGTTCTTTTTTT..................2482.500.002.500.000.00
........................AGGGAACTGTCGCTGCTGAT.....................................................................................2036.330.006.330.000.00
.......................................................................................TATCACAGGGGCTGTTCTTTTT....................2282.380.002.380.000.00
.........................................................................................TCACAGTGGCTGTTCTTTTT....................2082.380.002.380.000.00
.......................................................................................TATTACAGTGGCTGTTCTTTT.....................2182.250.002.250.000.00
.......................................................................................TATCACAGTGGCTGTTCTTCT.....................2182.250.002.250.000.00
.......................................................................................TATCACAGTGCCTGTTCTTTT.....................2182.250.002.130.130.00


droVir3 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scaffold_12875:4112939-4113033 + 57.61
TAACCATGCCGT------TTTTAACCCAAGGGAACTTCTGCTGCTGATATATTA-----TTGAAAAACT-ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TGACGCT--CGTCAATTGTTTAAAAGGAAGAGAACGTTCGCTGTTGATGTAGTCGACCTTTGTAC---TCTTTATATCACAGTGGCTGTTCTTTTTTGTT----------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
............................AGAGAACGTTCGCTGTTGATGTA.................................................................23273.500.000.0073.500.000.00
............................AGAGAACGTTCGCTGTTGATGT..................................................................22220.000.000.0020.000.000.00
............................AGAGAACGTTCGCTGTTGATG...................................................................21218.500.500.0018.000.000.00
..........................................................................TATCACAGTGGCTGGTCTTTTT....................2271.290.000.000.860.290.14
..........................................................................TATCACAGTAGCTGTTCTTTTT....................2271.140.000.001.140.000.00
..........................................................................TATCACAGTGGCTGTTCTTTTT....................2271.140.860.000.290.000.00
..........................................................................TATCACGGTGGCTGTTCTTTTT....................2270.860.140.000.710.000.00
..........................................................................TATCACAGTGGCTGGTCTTTTTTTT.................2522.500.000.002.000.000.50
..........................................................................TATCACAGTGGCTGTTCTTTT.....................2170.710.570.000.140.000.00
..........................................................................TATCACAGTGGCTGGTCTTTTTT...................2370.570.000.000.290.000.29
..........................................................................TATCACAGTGGCTGGTGTTTTT....................2270.570.000.000.570.000.00
..........................................................................TATCACAGTGGCTGGGCTTTTT....................2270.570.000.000.570.000.00
..........................................................................TATCACAGTGGCTGGTTTTTTT....................2270.570.000.000.140.430.00
..........................................................................TATCACAGTGGCTGCTCTTTTT....................2270.430.000.000.430.000.00
............................AGAGAACGTTCGCTGTTGATGTT.................................................................2321.500.000.001.500.000.00
..........................................................................TATCACAGTGGCTGGTATTTTT....................2270.430.000.000.430.000.00
..........................................................................TATCACAGTGGCTGGTCTTTTTTTTT----------------2621.500.000.001.500.000.00
............................AGAGAACGTTCGCTGTTGATTTA.................................................................2321.500.000.001.500.000.00
.............AATTGTTGAAAAGGAAGGG....................................................................................1921.501.500.000.000.000.00
..........................................................................TATCACAGTGGCTGGTCTTTT.....................2170.430.000.000.290.000.14
1 scaffold_12875:4112748-4112878 + 47.55
TAACCA---------------------TGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATT-----------ATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TAAATATTTGCTGACAAATTTCTTATGTGCTATGTTTAACCGCAGGGAACTGCTGCTGCTGATATACTGTATAGATTATATCGA-----TTCCATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAATCCACAA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
...........................................AGGGAACTGCTGCTGCTGATATA......................................................................23310.000.000.0010.000.000.00
..............................................................................................TATCACAGTGGCTGGTCTTTTT....................2271.290.000.000.860.290.14
..............................................................................................TATCACAGTGGCTGTTCTTTTT....................2271.140.860.000.290.000.00
..............................................................................................TATCACAGTAGCTGTTCTTTTT....................2271.140.000.001.140.000.00
..............................................................................................TATCACGGTGGCTGTTCTTTTT....................2270.860.140.000.710.000.00
..............................................................................................TATCACAGTGGCTGTTCTTTT.....................2170.710.570.000.140.000.00
..............................................................................................TATCACAGTGGCTGGTTTTTTT....................2270.570.000.000.140.430.00
..............................................................................................TATCACAGTGGCTGGTGTTTTT....................2270.570.000.000.570.000.00
..............................................................................................TATCACAGTGGCTGGGCTTTTT....................2270.570.000.000.570.000.00
..............................................................................................TATCACAGTGGCTGGTCTTTTTT...................2370.570.000.000.290.000.29
..............................................................................................TATCACAGTGGCTGCTCTTTTT....................2270.430.000.000.430.000.00
..............................................................................................TATCACAGTGGCTGGTATTTTT....................2270.430.000.000.430.000.00
..............................................................................................TATCACAGTGGCTGGTCTTTT.....................2170.430.000.000.290.000.14
..............................................................................................TATCACAGTGGCTGGTTTT.......................1970.290.000.140.140.000.00
..............................................................................................TATCACAGTGGTTGTTCTTTTT....................2270.290.000.000.290.000.00
..............................................................................................TATCACAGGGGCTGTTCTTTTT....................2270.290.000.000.290.000.00
..............................................................................................TATCACAGTGGCTGTTCTTTTTT...................2370.290.000.000.290.000.00
..............................................................................................TATCACAGTGACTGTTCTTTTT....................2270.290.000.000.140.000.14
..............................................................................................TATCACAGTGGCTGGTCCTTTT....................2270.290.000.000.290.000.00
..............................................................................................TATCACAGTGGCTGATCTTTTT....................2270.290.000.000.290.000.00
..............................................................................................TATCACAGTGGCTGTTCTTTTTC...................2370.290.290.000.000.000.00
..............................................................................................TATCACAGTCTCTGTTCTTTT.....................2170.290.000.000.290.000.00
..............................................................................................TATCACAGTGGCTGGTCTTT......................2070.290.000.000.290.000.00
..............................................................................................TATCACAGTGGCTGGTGTTTT.....................2170.140.000.000.140.000.00
..............................................................................................CATCACAGTGGGTGTTCTT.......................1970.140.000.140.000.000.00
..............................................................................................TATCACAGTGGCTGTGCTTT......................2070.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGGTCGTT......................2070.140.000.000.140.000.00
................................TGTGTAACCGCAGGGACCTG....................................................................................2020.500.000.000.000.000.50
..............................................................................................TCTCACAGTGGCTGTTCTTTTT....................2270.140.000.000.140.000.00
...........................................AGGGCACTGCTGCTGCTGATCTA......................................................................2330.330.000.000.330.000.00
..............................................................................................TATCACAGTGGCTGGTCTTGTT....................2270.140.000.140.000.000.00
..............................................................................................TATCACAGTTGCTGTTCTTTTT....................2280.130.000.000.130.000.00
..............................................................................................TATCACAGTGGCTGGTGTT.......................1970.140.000.000.140.000.00
..............................................................................................TATCACAGTAGCTGTTCTTTTTG...................2370.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTGTTTTT.....................2170.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTCTTTTC....................2270.140.140.000.000.000.00
..............................................................................................TAACACAGTGGCTGTTGTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTTTGTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTGCCTGTTCTTTTT....................2270.140.000.000.140.000.00
...........................................AGGGAACTGCTGCTGCTCATCTA......................................................................2330.330.000.000.330.000.00
..............................................................................................TATCACAGTGGTTGTTCTTTTTT...................2370.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTATTCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACGGTGGCTGGTCTTTT.....................2170.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTCTTTC.....................2170.140.000.000.140.000.00
...........................................AGGGAACTGCTGCTGCTGATCTA......................................................................2330.330.000.000.330.000.00
..............................................................................................TATCACAGTGCCTGGTCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGGCCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTGACTGTTCTTT......................2070.140.000.000.140.000.00
..............................................................................................TATCACAGTGGTTGTTCTTTT.....................2170.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTGCCTTT.....................2170.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTGCTTGTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTCTT.......................1970.140.140.000.000.000.00
..............................................................................................TATCACAGTGGCTGTTGTTT......................2070.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGGTCTGTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTxGCTGTTCTTTTT....................2170.140.000.000.140.000.00
................................................................................................TATCAGTGGCTGTTCTTTTT....................2070.140.140.000.000.000.00
..............................................................................................TATCACAGTGGCTGGTTTTTT.....................2170.140.000.000.140.000.00
..............................................................................................TATCACAGTGGTTGTTCTTTC.....................2170.140.000.140.000.000.00
..............................................................................................TATCACAGTCGCTGTTCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAATGGCTGTGCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCAGAGTGGGTGTTCTT.......................1970.140.000.140.000.000.00
..............................................................................................TATCACAGTGGCTGGGCTTTT.....................2170.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGCTCTTTTTT...................2370.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTGTTTTG....................2270.140.000.000.140.000.00
..............................................................................................TATCGCAGTGGCTGTTCTTTTTT...................2370.140.000.000.140.000.00
..................................................................................................ACAGTGGCTGTTCTTTTT....................1870.140.000.000.140.000.00
..............................................................................................TATCACAGTGACTGGTCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACATTGGCTGTTCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCCGGTCTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTTTTTTT....................2280.130.000.000.130.000.00
..............................................................................................TATCACAGTGGCTGTGTTTTTT....................2270.140.000.000.140.000.00
..............................................................................................TATCACAGTTGCTGTTCTTTTTT...................2370.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTATTCTTTTTT...................2370.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTGTT.......................1970.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGTTTTTTTTT...................2370.140.000.000.140.000.00
..............................................................................................TATCACAGAGGCTGGTCTTTT.....................2170.140.000.000.140.000.00
..............................................................................................TATCACAGTGGCTGCTCTTT......................2070.140.000.000.140.000.00
2 scaffold_12875:4112595-4112718 + 42.12
TAACCATGCCGT--------------------TTTTAACCCAAGGGAACTTCTGCTGCTGATATAT-TATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
AAACTATATCGCCCAGTTATCTGTTTATAGCCTTTAAAGTAGAGAGAATAGACGCTG-TGCTGTATGTTTTGCGTATGGTCTATATCACAGTGGCTGTTCTTTTTGTACCTGAAGCGCCGTACAA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..........................................AGAGAATAGACGCTG-TGCTGTA............................................................22232.000.000.0032.000.000.00
..........................................AGAGAATAGACGCTG-TGCTGT.............................................................2126.000.000.006.000.000.00
...................................................................................TATCACAGTGGCTGGTCTTTTT....................2271.290.000.000.860.290.14
...................................................................................TATCACAGTGGCTGTTCTTTTT....................2271.140.860.000.290.000.00
...................................................................................TATCACAGTAGCTGTTCTTTTT....................2271.140.000.001.140.000.00
...................................................................................TATCACGGTGGCTGTTCTTTTT....................2270.860.140.000.710.000.00
..........................................AGAGAATAGACGCTG-TGCTTTA............................................................2222.500.000.002.500.000.00
...................................................................................TATCACAGTGGCTGTTCTTTT.....................2170.710.570.000.140.000.00
...................................................................................TATCACAGTGGCTGGGCTTTTT....................2270.570.000.000.570.000.00
...................................................................................TATCACAGTGGCTGGTTTTTTT....................2270.570.000.000.140.430.00
...................................................................................TATCACAGTGGCTGGTGTTTTT....................2270.570.000.000.570.000.00
...................................................................................TATCACAGTGGCTGGTCTTTTTT...................2370.570.000.000.290.000.29
...................................................................................TATCACAGTGGCTGGTATTTTT....................2270.430.000.000.430.000.00
...................................................................................TATCACAGTGGCTGGTCTTTT.....................2170.430.000.000.290.000.14
...................................................................................TATCACAGTGGCTGCTCTTTTT....................2270.430.000.000.430.000.00


droMoj3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_6496:20936121-20936236 - 62.16
TAACCA-------TGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATATTAT-------TGAAAA-ACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAA
TATCCAGAGAGATTGC---GTTTAACCGCAGGGAACTGCTGCTGCTGATATACTATATGTATTTGTCAGTAC-TCTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAAATAGCCAA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.............................................................................TATCACAGTAGCTGTTCTTTTT.....................2237.330.000.000.007.33
.............................................................................TATCACAGTGACTGTTCTTTTT.....................2235.670.000.000.005.67
.............................AGGGAACTGCTGCTGCTGATATA....................................................................23117.000.000.000.0017.00
.............................................................................TATCACAGTGGCTGGTCTTTTT.....................2234.000.330.000.003.67
.............................................................................TATCACAGTAGCTGTTCTTTT......................2134.000.000.000.004.00
.............................................................................TATCACAGTGGCTGGTGTTTT......................2133.670.000.000.003.67
.............................................................................TATCACAGTGGCTGGTGTTT.......................2033.000.000.000.003.00
.............................................................................TATCACAGTGACTGTTCTTTT......................2132.670.000.000.002.67
.............................................................................TATCACAGTGGCTGGTGTTTTT.....................2232.670.000.000.002.67
.............................................................................TATCACAGTGGCTGCTCTTTT......................2132.670.000.000.002.67
.............................................................................TATCACAGTGGCTGGTCTTTT......................2132.330.000.000.002.33
.............................................................................TATCACGGTGGCTGTTCTTTT......................2132.000.000.000.002.00
.............................................................................TATCACAGTGGCTGGTGTT........................1932.000.000.000.002.00
.............................................................................TATCACAGTGGCTGTTCTTTT......................2132.001.670.000.000.33
.............................................................................TATCACAGTGGCTGCTCTTTTT.....................2232.000.000.000.002.00
.............................AGGGAACTGCTGCTGCTGATAT.....................................................................2215.000.001.000.004.00
.............................................................................TATCACAGTGGCTGGTATTTTT.....................2231.330.000.000.001.33
.............................................................................TATCACAGTGGCTGGTCTT........................1931.330.000.330.001.00
.............................................................................TATCACAGTGGTTGTTCTTTTT.....................2231.330.000.000.001.33
.............................................................................TATCACGGTGGCTGTTCTTTTT.....................2231.330.000.000.001.33
.............................................................................TATCACAGTGGCCGGTCTTTT......................2131.330.000.000.001.33
.............................................................................TATCACAGTGGCTGGTCGT........................1931.000.000.000.001.00
.............................................................................TATCACAGTGGCTGGGCTTTTT.....................2231.000.000.330.000.67
.............................................................................TATAACAGTGGCTGTTCGT........................1931.000.000.000.001.00
.............................................................................TATCACAGTGGCTGTTCTTTTT.....................2231.000.670.000.000.33
.............................................................................TATCACAGTxGCTGTTCTTTTT.....................2131.000.000.000.001.00
.............................................................................TATCACAGTGACTGTTCTTTTTC....................2331.000.000.000.001.00


droGri2 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scaffold_15112:2108071-2108181 - 72.02
T--AACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATAT-----TATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TTCACCAATGCTATGTTTAACCACAGGGAACTGCTGCTGCTGATATACAACCATATTTATACACGACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATTTGCAA
SizeHit CountTotal NormV109
Male body
.....................................................................TATCACAGTGGCTGTTCTTTT.....................2181.131.13
.....................................................................TATCACAGTGGCTGTTCTTTTT....................2280.630.63
.....................................................................TATCACAGTGGCTGTTCTTT......................2080.250.25
.....................................................................TATCACAGTGGCTGGTCTTTT.....................2180.130.13
.....................................................................TATCACTGTGGCTGTTCTTTTT....................2280.130.13
1 scaffold_5621:3518-3628 + 72.02
T--AACCATGCCGTTTTTAACCCAAGGGAACTTCTGCTGCTGATATAT-----TATTGAAAAACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAA
TTCACCAATGCTATGTTTAACCACAGGGAACTGCTGCTGCTGATATACAACCATATTTATACACGACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATTTGCAA
SizeHit CountTotal NormV109
Male body
.....................................................................TATCACAGTGGCTGTTCTTTT.....................2181.131.13
.....................................................................TATCACAGTGGCTGTTCTTTTT....................2280.630.63
.....................................................................TATCACAGTGGCTGTTCTTT......................2080.250.25
.....................................................................TATCACAGTGGCTGGTCTTTT.....................2180.130.13
.....................................................................TATCACTGTGGCTGTTCTTTTT....................2280.130.13
2 scaffold_15112:2108205-2108329 - 44.04
TAACCA---TGCCGTTTTTAACCC--------AAGGGAACTTCTGCTGCTGATATATTATTGAAAAAC--TACTATATCACAGTGGCTGTTCTTTTTG----------GTTGCACGGCCAATTCCAA
TTTCCGATTTGTGGTTTATAGCCTTTAATGTAAAGAGAATAGATGCTG-TGCTGTA-TGTTGAACGTATTGTCTATATCACAGTGGCTGTTCTTTTTGTACCAAAAGTGCCGTACAACAAAATGAGT
SizeHit CountTotal NormV109
Male body
...........................................................................TATCACAGTGGCTGTTCTTTT...............................2181.131.13
...........................................................................TATCACAGTGGCTGTTCTTTTT..............................2280.630.63
...........................................................................TATCACAGTGGCTGTTCTTT................................2080.250.25
...........................................................................TATCACTGTGGCTGTTCTTTTT..............................2280.130.13
.........................................GATGxTG-TGCTGGA-TGTTG.................................................................1870.140.14
...........................................................................TATCACAGTGGCTGGTCTTTT...............................2180.130.13


Generated: 04/20/2012 at 05:23:08 EDT