Possible Orthologs for dme-mir-4962

droSim1 - 75 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
303	chrX:2692027-2692181 +	97.44	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TATGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATACAATAACAGCTCATTGTGCTGAGCGCCCAGCCT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........................................................................................ACGATGTAGAGAGTGAGGGAG........................................... 21 3 1.33 0.00 0.67 0.67 0.00 ...................................................CTCTxTTAACATTGAGCTGT.................................................................................... 19 3 1.33 0.00 0.00 1.33 0.00 .................................................................................................GAGAGAGAGAGGGAGAGA........................................ 18 41 0.02 0.02 0.00 0.00 0.00 ........................................................................................TAGACGATGTAGAGAGTGAGGGA............................................ 23 3 0.33 0.00 0.33 0.00 0.00 ..............................TCAGTCTCTCTCTCTCCC........................................................................................................... 18 4 0.25 0.00 0.25 0.00 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGA............................................ 20 3 0.33 0.00 0.33 0.00 0.00 ....................................................TCTxTTAACATTGAGCTGT.................................................................................... 18 3 0.33 0.00 0.00 0.33 0.00 ..............................TCGGTCTCTCTCTCTCCC........................................................................................................... 18 6 0.17 0.00 0.17 0.00 0.00 .........................................................................................AGACGATGTAGAGAGTCAGGGA............................................ 22 3 0.33 0.00 0.33 0.00 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGAGA.......................................... 22 3 0.33 0.00 0.33 0.00 0.00 ..........................................................................................GACGATGTAGAGAGTGAGGGAGA.......................................... 23 3 0.33 0.00 0.00 0.00 0.33
304	chrX:2692023-2692163 +	48.75	TG----TGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TGAGTATGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATACAATAACAGCTCATT------------------ Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...............................................................................................ACGATGTAGAGAGTGAGGGAG........................................... 21 3 1.33 0.00 0.67 0.67 0.00 .......................................................CTCTxTTAACATTGAGCTGT.................................................................................... 19 3 1.33 0.00 0.00 1.33 0.00 ..............................................................................................GACGATGTAGAGAGTGAGGGAGA.......................................... 23 3 0.33 0.00 0.00 0.00 0.33 ...............................................................................................ACGATGTAGAGAGTGAGGGAGA.......................................... 22 3 0.33 0.00 0.33 0.00 0.00 ........................................................TCTxTTAACATTGAGCTGT.................................................................................... 18 3 0.33 0.00 0.00 0.33 0.00 ...............................................................................................ACGATGTAGAGAGTGAGGGA............................................ 20 3 0.33 0.00 0.33 0.00 0.00 .............................................................................................AGACGATGTAGAGAGTCAGGGA............................................ 22 3 0.33 0.00 0.33 0.00 0.00 ..................................TCGGTCTCTCTCTCTCCC........................................................................................................... 18 6 0.17 0.00 0.17 0.00 0.00 ..................................TCAGTCTCTCTCTCTCCC........................................................................................................... 18 4 0.25 0.00 0.25 0.00 0.00 .....................................................................................................GAGAGAGAGAGGGAGAGA........................................ 18 41 0.02 0.02 0.00 0.00 0.00 ............................................................................................TAGACGATGTAGAGAGTGAGGGA............................................ 23 3 0.33 0.00 0.33 0.00 0.00
261	chrU:8522541-8522708 +	47.42	TGTGTTTGGTTGTTTTTCCT--------TTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCT--------------------------CATTGTGCTGAGCGCCCAGCCT T----TTCGTTCTTCTTCGTTCGCCGTATTCTCTCCTTTCTGTCTCTCTCTGTCGCTCTCCCCCTTTCTAACCAAATCCATC----ATGCAAGTACAGTTAGCTGTA----------ACGACGACAACTACAACAACAACGAAACTGTTATGACGCTGTGTTGTTGTCA---TTTCACGTGCACAGCCT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..........................................................................................................A----------ACAACGACAACTACGAC....................................................... 18 1 4.00 0.00 0.00 4.00 0.00 ..........................................................................................................G----------ACGACGACGACTACAAC....................................................... 18 1 2.00 0.00 0.00 0.00 2.00 .................................................................................................................................AAAACGACAACGAAACTG.......................................... 18 1 2.00 0.00 2.00 0.00 0.00 .....................................TTATGTCTCTCTCAGTCGC..................................................................................................................................... 19 1 2.00 0.00 0.00 2.00 0.00 ..................................................................................................................................CAACAAGAACGAAACTGT......................................... 18 1 2.00 0.00 0.00 0.00 2.00 .............................................CTCTCTCTCTCTCTCCCC.............................................................................................................................. 18 12 0.08 0.00 0.00 0.08 0.00 .........................................................................................................................................ACCGAAACAGTTATGACG.................................. 18 1 1.00 0.00 0.00 0.00 1.00 .......................................................................................................................GACGACAACAACAACACC.................................................... 18 2 0.50 0.00 0.50 0.00 0.00 .................................................................................................................................CCACCAACAACGAAACTG.......................................... 18 1 1.00 0.00 1.00 0.00 0.00 ........................................................................................................................ACGACAACGACAACAACC................................................... 18 5 0.20 0.00 0.00 0.00 0.20 .........................................................................................................................CGACAACTTCAAGAACAA.................................................. 18 1 1.00 0.00 0.00 0.00 1.00 ..........................................................................................................A----------ACGACGACTACCACAACAAC.................................................... 21 1 1.00 0.00 0.00 1.00 0.00 .......................................ATGTCTCTCTCAGTCGCT.................................................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 .........................................................................................................................CTACAACTACAACAACAGC................................................. 19 14 0.07 0.00 0.00 0.07 0.00
305	chrX:2692031-2692199 +	46.61	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT------------------ T----TTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATACAATAACAGCTCATTGTGCTGAGCGCCCAGCCTGCGTCGACTGCGACACCA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........................................................................................ACGATGTAGAGAGTGAGGGAG............................................................. 21 3 1.33 0.00 0.67 0.67 0.00 ...................................................CTCTxTTAACATTGAGCTGT...................................................................................................... 19 3 1.33 0.00 0.00 1.33 0.00 .......................................................................................................................................................GCCTACGTCGACTGGGAC.... 18 1 1.00 0.00 0.00 1.00 0.00 .......................................................................................................................................................GCCTGCGTCGACTGCGACA... 19 1 1.00 0.00 0.00 1.00 0.00 ..............................TCGGTCTCTCTCTCTCCC............................................................................................................................. 18 6 0.17 0.00 0.17 0.00 0.00 ........................................................................................TAGACGATGTAGAGAGTGAGGGA.............................................................. 23 3 0.33 0.00 0.33 0.00 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGA.............................................................. 20 3 0.33 0.00 0.33 0.00 0.00 ..............................TCAGTCTCTCTCTCTCCC............................................................................................................................. 18 4 0.25 0.00 0.25 0.00 0.00 ..........................................................................................GACGATGTAGAGAGTGAGGGAGA............................................................ 23 3 0.33 0.00 0.00 0.00 0.33 .........................................................................................AGACGATGTAGAGAGTCAGGGA.............................................................. 22 3 0.33 0.00 0.33 0.00 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGAGA............................................................ 22 3 0.33 0.00 0.33 0.00 0.00 .................................................................................................GAGAGAGAGAGGGAGAGA.......................................................... 18 41 0.02 0.02 0.00 0.00 0.00 ....................................................TCTxTTAACATTGAGCTGT...................................................................................................... 18 3 0.33 0.00 0.00 0.33 0.00 ...................................................................................................................................................CCCAGCTTGCGxCGACTGC....... 18 1 1.00 0.00 0.00 0.00 1.00
369	chrX:9497170-9497290 +	46.45	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCT----CTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCG-TGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TACGTGTTTATGTTTTTCCGTGTTTCCCTTG--TGCTCTCTTTGGCTATTTTTTTTTGTTGTTACATTA---TTTTCGGTCCGTTGCTTGTGTATAACAAGTGAGAGAG--AGAAAGAGAGCGAGGAG-------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ....................TCTTTCCATTG--TGCTCTC........................................................................................................................ 18 1 2.00 0.00 0.00 0.00 2.00 ........................................................................................................CAGAG--AGAGAGAGAGCGA.................................... 18 19 0.05 0.05 0.00 0.00 0.00 .......................................................................................................AGAGAG--AGAGAGAGAGGGA.................................... 19 32 0.03 0.03 0.00 0.00 0.00
28	chr2L:13057021-13057175 +	46.31	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCT-----------------------------------------------CTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TGGATTTTTATTTATTTTATTCTTTTTCTTTTGGAATCTGCAATGCAATTTAACTCACTATTTAGATTGCCCCACTTAGTTTTGCGTTATTTCCATATCG-AATTGACCTTTAACTATGTTACTCATACGCCATTGAG---------------------------------------CATCATTGTGCAA-------GCACT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo
162	chr3R:7228372-7228503 +	42.85	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCC---------------------T TTTTGCCTACTCTCTTTCTATCTCTATCTCACTCTCTCTCTGTCGCTCTCTCTCTG----TACTTAACTGTCT-GTGTGTGTGTATGCTTG---------------------------------------TGTCTGTGTGTGTTGCACATATTCTTTAAAAGTTTTAACGAGAGCT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ....................................................................TGTCT-GTGTGTGTGTGTGT........................................................................................ 19 14 0.07 0.07 0.00 0.00 0.00 .......................................CTGTCGCTCTATCTCTC----T................................................................................................................... 18 4 0.25 0.00 0.00 0.00 0.25 ............................................................................GTGTGTGTTTGCTTG---------------------------------------TGC........................................... 18 1 1.00 1.00 0.00 0.00 0.00 .................................................................................TGTGTGCGTG---------------------------------------TGTCTGTG...................................... 18 1 1.00 0.00 0.00 0.00 1.00 ................................................................TGACTGTAT-GTGTGTGTGT............................................................................................ 19 1 1.00 1.00 0.00 0.00 0.00 ...............................CACTCACTCTGTCGCTCTCT............................................................................................................................. 20 1 1.00 0.00 0.00 1.00 0.00 .................................................................................TGTGTGCGTG---------------------------------------TGTCTGTGT..................................... 19 1 1.00 1.00 0.00 0.00 0.00 .....................................................................................TGCGTG---------------------------------------TGTCTGTGTGTGTG................................ 20 2 0.50 0.50 0.00 0.00 0.00 .....................................CTCGGTCGCTCTCTCTCC......................................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 ....................................................................TGTGT-GTGTGTGTGTGTG......................................................................................... 18 40 0.03 0.03 0.00 0.00 0.00 .....................................................................................TGCGTG---------------------------------------TGTCTGTGTGTGT................................. 19 3 0.33 0.33 0.00 0.00 0.00 ........................................................................T-GTGTGTGTGTGTGGTTG---------------------------------------.............................................. 18 5 0.20 0.00 0.00 0.20 0.00
20	chr2L:12155899-12156025 +	41.83	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTG---TTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGA-CGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TCCGAATTCCTGGCTCTGTTTTTTTTTCTTTTTGCATCATTGCTGGCTAATGACTGCTAATTACACTCAAATGATTTGATGCTGCAGCGGGTAATTCTGCGCGGAAAATCGTGGAAAATGCAGATAG-------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo TTCGTATTCCTGGCTCTG............................................................................................................................................. 18 1 3.00 0.00 0.00 0.00 3.00
216	chr3R:21899247-21899411 +	41.46	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTT-TCCCTCTCTCT------GTTTACATTGAGCTGTTTTGTCCGTGCACGTGCT-----AGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATT------GTG------------CTGAGCGCCCAGCCT T-------------CGACCACTCGTGGCTCTCCGGATCGCTCATTTCGCTCGCCGTTCTCGCGCTGGCGTTGCTCCGTTTCGCTCGCACCCGC--CTGGTGAGCAGACGCGTATATTTGG------AGGCGTTGGGGCGACCGCTCACGACAGTTGTGCTTGGAACGCTTCGGAGTGAAGATCGT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .....................................................................................................................................................ACAGTTGTGCTTGGAACGCTTC.............. 22 1 3.00 0.00 3.00 0.00 0.00 ...................................................................................................................................................................AACGCTTCGGAGTGAAGA.... 18 1 2.00 0.00 2.00 0.00 0.00 ...................................................................................................................................................................AACGCTTCGGAGTGAAGG.... 18 1 2.00 0.00 2.00 0.00 0.00 ....................................................................................................................................................GACAGTTGTGCTTGGAACG.................. 19 1 2.00 0.00 2.00 0.00 0.00 .....................................................................................................................................................ACAGTTGTGCTTGGAACGCT................ 20 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................................................TGG------AGGCGTTGGTGGGAC............................................ 18 1 1.00 0.00 1.00 0.00 0.00 ....................................................................................................................................................GACAGTTGTGCTTGGAAC................... 18 1 1.00 0.00 1.00 0.00 0.00
456	chr2L:18575355-18575492 -	40.59	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTC-----TCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT CTTTGTTGTGAGCTCCACACCGCTCCTCTCTCCGCTTTTCTCTCCTGTTTTCCTGTTTTCTCTCCTGTTGTGTTCTGTTGCTCATGC--------GAAAATCGAGGGGGCGGCGGCGAGGGAAAGTTGGG-------------TGTTCGGCGGACA-CAC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ................................................................CGGTTGTGTTCTGCTGCT.............................................................................. 18 1 1.00 0.00 0.00 1.00 0.00 ....................................CCTCxCTCCTGTTTTCCTG......................................................................................................... 18 2 0.50 0.00 0.50 0.00 0.00
486	chr2R:9739138-9739248 -	39.74	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTA--------GAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TTTTTCGCTCTGCCCGCCCCTTCTTCTCTCTT----------------TCTCTCTCTCTGCAGCAAAGTGCGTCATAAATGTGTGTAATAAAATATTTACTTTCTTTTAGAGCAAGCGGAAAAGGGA------------------------------------ Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ........................TCTCTTTT----------------TCTCTCTCCC......................................................................................................... 18 5 1.40 0.00 1.40 0.00 0.00 ..........................TCTCTT----------------TTTCTCTCTCCG....................................................................................................... 18 2 1.50 0.00 1.50 0.00 0.00
840	chrX:10506148-10506274 -	39.32	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGA----------TGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT CT--------------------------------TCTTCTTCCCTCCGTCTCTCTGTGTGTGTGTGAGTGTGCTGCCTGTGTGTGTTACAGCTTGTGTACGTGAGTGTGTGTATTGGCAAAGGAAATTAGCACAACAAAAGCGAA------AAGGAAACGAACAC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...................................................CTCTGTGTxTGTGTCAGTG............................................................................................... 18 1 3.00 0.00 2.00 0.00 1.00 ....................................................GCTGTGTGTGTGTGAGTG............................................................................................... 18 4 0.50 0.00 0.00 0.00 0.50 ............................................................................................TTGTGTACGTGAGTGTGTGT..................................................... 20 1 1.00 1.00 0.00 0.00 0.00 ........................................................TGTGTGTGTGGGTxTGCTGCC........................................................................................ 20 1 1.00 1.00 0.00 0.00 0.00 ......................................................TGTGTGTGTGTTAGTGTT............................................................................................. 18 5 0.20 0.20 0.00 0.00 0.00 ......................................................TGTGTGTGTGTGTGTGTG............................................................................................. 18 40 0.03 0.03 0.00 0.00 0.00 ....................................................................................GTTACAGCTTGTGTACGTGAGTG.......................................................... 23 1 1.00 1.00 0.00 0.00 0.00 .................................................CTCTCTGTGTxTGTGTCAGTGTG............................................................................................. 22 1 1.00 1.00 0.00 0.00 0.00 ....................................................TGTGTGTGTGTGxGAGTCTGC............................................................................................ 20 1 1.00 1.00 0.00 0.00 0.00 ....................................................................................GTTACAGCTTGTGTACGTGAGTGTGT....................................................... 26 1 1.00 0.00 0.00 0.00 1.00 ......................................................TGTGTGTGTGCGAGAGTG............................................................................................. 18 7 0.14 0.00 0.14 0.00 0.00 ..................................................TGTCTGTGTGTGTGTGTGT................................................................................................ 19 14 0.07 0.07 0.00 0.00 0.00 ....................................................TGTGTGTGTGTGTGAGTG............................................................................................... 18 5 0.20 0.00 0.20 0.00 0.00 ......................................................TGTGTGTGTGTGTGTGTGG............................................................................................ 19 19 0.05 0.05 0.00 0.00 0.00 ........................................................TGTGTGTGTGAGTGTGCTGCCT....................................................................................... 22 1 1.00 0.00 0.00 0.00 1.00 ....................................................TATGTGTGTGTGTGAGTGC.............................................................................................. 19 10 0.10 0.00 0.00 0.10 0.00 ....................................................TGTGTGTGTGTGTGTGTGT.............................................................................................. 19 34 0.03 0.03 0.00 0.00 0.00 ....................................................TGTGTGTGTGTGTGTGTG............................................................................................... 18 40 0.03 0.03 0.00 0.00 0.00 ..................................................................................................................TGGCCAAGGAAATTTGCAC................................ 19 1 1.00 1.00 0.00 0.00 0.00 .............................................................................................TATGTAAGTGAGTGTGTGT..................................................... 19 1 1.00 1.00 0.00 0.00 0.00 ........................................................TGTGTGTGTGTGTGTGGT........................................................................................... 18 10 0.10 0.10 0.00 0.00 0.00 ......................................................TGTGTGTGTGTGTGTGTGT............................................................................................ 19 34 0.03 0.03 0.00 0.00 0.00 ..................................................GCTCTGTGTGTGTGTGTGT................................................................................................ 19 2 0.50 0.50 0.00 0.00 0.00 ...............................................CTCTCTCTGTGTGTGAGTG................................................................................................... 19 2 0.50 0.00 0.50 0.00 0.00 ...................................................CTCTCTCTGTGTGTGAGTG............................................................................................... 19 2 0.50 0.00 0.50 0.00 0.00
597	chr3R:5019273-5019407 -	37.35	TGTGTTTGG-------TTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGC-------GCCCAGCCT AGTAGTAGCATTATGGCTGCGTCCGCC--------------------GCAGT--GGCAGCCAGCGTCGTTGGAGCTACTGCGTCCAAGCCCACC---ATCGATGTCCTGGGCG---------GCGTCCTGGACTACAGTTCCTTGGGCGGAGCTGCAACAGGCTCACTG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ............................................................................................CC---TTAGATGTCCTGGGCG---------............................................... 18 1 122.00 0.00 21.00 41.00 60.00 ..................................................................................................TAGATGTCCTGGGCT---------GCG............................................ 18 1 62.00 0.00 14.00 26.00 22.00 .............................................................................................C---TTAGATGTCCTGGGCG---------G.............................................. 18 1 19.00 0.00 2.00 9.00 8.00 ............................................................................................CC---TTAGATGTCCTGGGCG---------G.............................................. 19 1 3.00 0.00 0.00 2.00 1.00 ...........................................................................................ATC---ACCGATGTCCTGGGC......................................................... 18 1 2.00 0.00 2.00 0.00 0.00 ............................................................................................CC---ATAGATGTCCTGGGCT---------GC............................................. 20 1 1.00 1.00 0.00 0.00 0.00 .............................................................................................C---TTCGATGTCCTGGGCT---------GC............................................. 19 1 1.00 0.00 0.00 1.00 0.00
606	chr3R:7524904-7525032 -	34.69	TGTGTTTGGTTGTT---------------TTTCCTTTCTTTTCTCTCC---GTCTCTCTCTTT--CCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TCTGGCCCTGGCCCTGGATCTCGACGAGAGCGCCTTTCCCTTCGAGCTGACATCCGACTATGGCACCCTGTCGCCGCTCA--C----CAGTCCCA----------------------------------------GGCAGTTCAATTACGTGTGGGTGGGCCAGGACTCCAGCCA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...................................................................CTGACGCCGCTCA--C----CCGT.................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 .............CTGGATCTCGTCGAGACC................................................................................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00
851	chrX:13701311-13701391 -	32.68	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCC------------TCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT GGTGTCTTAGGTTTTGTCTCTCTCTCACTCTCTCTTTCTTCCGCTCCCTGTATATGTCTCTCTTTCTGTG---------TTTTTTTTTCC----------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........TTTTGTCTCTCACTGACT.......................................................................................................................................... 18 1 28.00 0.00 2.00 2.00 24.00 ...........TTTTGTCTCTCGCTGACT.......................................................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00
638	chr3R:20115573-20115649 -	32.03	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTC------TGTTTACATTGAGCTGT-TTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TTTTGTCGGCCTTCTCGCTTTCGCTCTCGCTC----TCTCTCTCTCTCTCTCTCTTTCGCTG------TTTCTCTGTCTCTGTCAGT--------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .................TTTTCGCTCTCACTC----TCTCTCT....................................................................................................................... 22 1 4.00 0.00 0.00 0.00 4.00 .................TTTTCGCTCTCACTC----TCTCT......................................................................................................................... 20 1 2.00 0.00 0.00 0.00 2.00 .................TTTTCGCTCTCACTC----TCTCTCTCTC.................................................................................................................... 25 1 2.00 0.00 0.00 0.00 2.00 .................TTTTCGCTCTCACTC----TCTCTCTC...................................................................................................................... 23 1 2.00 1.00 0.00 0.00 1.00 .................TTTTCGCTCTCACTC----TCTCTC........................................................................................................................ 21 1 2.00 1.00 0.00 0.00 1.00 ...............................C----TCTCTCTCTCTCTCCCC............................................................................................................. 18 12 0.08 0.00 0.00 0.08 0.00 .................TTTTCGCTCTCACTC----TCTCTCTCT..................................................................................................................... 24 1 1.00 0.00 0.00 0.00 1.00 ..........................TCGGTC----TCTCTCTCTCCC.................................................................................................................. 18 6 0.17 0.00 0.17 0.00 0.00 ........................................TCTGTCTCTCTCTCTTTCACT..................................................................................................... 21 1 1.00 0.00 0.00 1.00 0.00 ...........................CGCGC----CCTCTCTCTCTCTCT............................................................................................................... 20 2 0.50 0.00 0.00 0.50 0.00 .........................TTCGCTC----TCACTCTCTCTCTCTC.............................................................................................................. 23 2 0.50 0.00 0.00 0.00 0.50 ...................TTCGCTCTCACTC----TCTCTCTCTC.................................................................................................................... 23 2 0.50 0.00 0.00 0.00 0.50 .....................................CTCTCTCTCTCTCTCCCC........................................................................................................... 18 12 0.08 0.00 0.00 0.08 0.00 .......................CTGTCGCTC----TATCTCTCT..................................................................................................................... 18 4 0.25 0.00 0.00 0.00 0.25 ..............................TC----TGTCTCTCTCTCTCTCCCT........................................................................................................... 21 7 0.14 0.00 0.14 0.00 0.00 .............................CTC----TCTCTCTCTCTCCCC............................................................................................................... 18 12 0.08 0.00 0.00 0.08 0.00 .........................CGCGCCC----TCTCTCTCTCTCT................................................................................................................. 20 2 0.50 0.00 0.00 0.50 0.00
183	chr3R:10902201-10902338 +	31.16	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGA-----------GCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT ATCATTAACTGCCGCAGTCATTTTCGCCGCAGCAGCC-GCTGCTACCGCCTTCGCAGCGGCATTAGCATTAGGAGCAGCAAATTTGG-------------CGGCGGTACCAAGAGCAACGGCAGCGGCAAAG--------------GAGTCCTTGGAGCCGCAGCA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..........................................................GGCATTAGCATTAGGAGCA......................................................................................... 19 1 2.00 2.00 0.00 0.00 0.00 ................................................................................AATTTGG-------------CGGCGGTACCAAGAGC.................................................. 23 1 2.00 0.00 0.00 0.00 2.00 ..........................................................GGCATTAGCATTAGGAGC.......................................................................................... 18 1 2.00 0.00 0.00 0.00 2.00 ........................................................................................................GGTACCAAGAGCAACGGC............................................ 18 1 1.00 1.00 0.00 0.00 0.00 .................................................CTTCGCAGCGGCATTAGCCTTAGGAGC.......................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 ...........................................................GCATTAGCATTAGGCGGA......................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 .......................................................................................................................GGAAGCGGCAAAG--------------GAGGC............... 18 1 1.00 0.00 0.00 1.00 0.00 .......ACTGCCGCAGTCATTTTCGCC.......................................................................................................................................... 21 1 1.00 0.00 0.00 0.00 1.00 ...............................................................................................................................CAAAG--------------GAGTCCTTGGAGCCGCAGCA 25 1 1.00 0.00 1.00 0.00 0.00 ........................................................................................................GGTACCAAGAGCAACGGCAGC......................................... 21 1 1.00 1.00 0.00 0.00 0.00 ....................................................................................................CGGCGGTACCAAGAGCAACGGCAG.......................................... 24 1 1.00 0.00 0.00 1.00 0.00 ............................................................................AGCAAATTTGG-------------CGGCGGTAC......................................................... 20 1 1.00 0.00 0.00 1.00 0.00 ........................................................................................................GGTACCAAGAGCAACGGCAG.......................................... 20 1 1.00 0.00 0.00 1.00 0.00 .............................................................................................................................GGCAAAG--------------GAGTCCTTGGAGC....... 20 1 1.00 1.00 0.00 0.00 0.00 ........................................................GGGGCATTAGCATTACGA............................................................................................ 18 1 1.00 1.00 0.00 0.00 0.00 ...................................................................ATTAGGAGCAGCAAATTTGG-------------CGGC.............................................................. 24 1 1.00 1.00 0.00 0.00 0.00 ...................ATTTTCGCCGCAGCAGCC-GGT............................................................................................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ....................................................................................TGG-------------CGGCGGTACCAAGAGCAACGGC............................................ 25 1 1.00 0.00 0.00 0.00 1.00 ..............................................................................................................................GCAAAG--------------GAGTCCTTGGAGC....... 19 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................................................TACCAAGAGCAACGGCAGC......................................... 19 1 1.00 0.00 0.00 0.00 1.00 .........................................................................................................GTACCAAGAGCAACGGCAGC......................................... 20 1 1.00 1.00 0.00 0.00 0.00 ..........................................................................................................................AGCGGCAAAG--------------GAGTCCTTGGAGCC...... 24 1 1.00 0.00 0.00 1.00 0.00 .................................................................................ATTTGG-------------CGGCGGTACCAAGAGC.................................................. 22 1 1.00 0.00 0.00 0.00 1.00 ...............AGTCATTTTCGCCGCAGC..................................................................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 ...............................................................................................................................CAAAG--------------GAGTCCTTGGAGCC...... 19 1 1.00 0.00 0.00 0.00 1.00 .......................................................AGCGGCATTAGCATTAGGAGC.......................................................................................... 21 1 1.00 0.00 0.00 0.00 1.00
581	chr3L:18060149-18060223 -	30.07	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTG--AGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT T---------TTTGCCTCTTTTCGTTCCGTTCCGTCTCTTTCCGTCCTTCCGTTTGCCTCTGATGAAATCTCTTTCGTCAGCGC------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .................CTTTTCGTTCCGTTCCGTCTC....................................................................................................................... 21 1 3.00 0.00 3.00 0.00 0.00 .......................GTTCCGTTCCGTxTCGTTC................................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ..............................................................ATTAAAACTCTTTCGTCA............................................................................. 18 1 1.00 0.00 0.00 1.00 0.00 ....................................TCTTTCCGTCCATCCGTA....................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00
354	chrX:8219358-8219469 +	29.41	TGTGTTTGGTTGTTTTTCC-------------------------------TTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT GGCATTTGATTTTATTTATCACAAGTACAACATTGAGATCTTTAACTGCATCCCCTTTTTTTCTGTGCATATTTCTACGCTTCTCTGACTTTTTTTCCCCGTTTCGCTTGTG-------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...............................................................................TTTCTCTGACTTTCTTTC......................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00
531	chr3L:3276512-3276594 -	29.36	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTT------ACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TCCACGCCCCGTTTTCCTCTCTTTTCTCGCCCCACCCCTCTTTATTCCGCCCCCTTTTTCCGCAAACACAAAGCGCAATTGTC------------------------------------------------------------------------------ Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo
783	chrX:3847431-3847495 -	28.76	TGTGTT-TGGTTGTTTTTCCTTTCTTT-TCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TTTGTTGTAGTTGTTTATCTTGTCTCTCGCTCTCTCACTCTGTGTGTCTCTGTCTCTGTTGCTCT-------------------------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........................CGTTCTCTCACTCTGTGT................................................................................................................ 18 1 1.00 0.00 0.00 1.00 0.00 ...............................................CTCTGTCTCTGTTGCTCT-------------------------------------------------------------------------------------------- 18 1 1.00 0.00 0.00 0.00 1.00 ........................TCTCGCTCTCTCACTCTGTGTGTCTC........................................................................................................... 26 1 1.00 1.00 0.00 0.00 0.00

droSec1 - 64 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
513	super_13710:747-901 +	96.16	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TATGTTTGGTTGTTTTTCCTTTCTTTTCTTTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATACAATAACAGCTCATTGTGCTGAGCGTCCAGCCT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................................................................................GACGATGTAGAGAGTGAGGGAGA.......................................... 23 2 2.50 0.50 0.00 2.00 ...................................................CTCTxTTAACATTGAGCTGT.................................................................................... 19 2 2.00 0.00 2.00 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGAGA.......................................... 22 2 1.00 0.50 0.50 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGAG........................................... 21 2 0.50 0.50 0.00 0.00 ......................................................................................GCTAGACGATGTAGAGAGTGAGGGAGA.......................................... 27 2 0.50 0.50 0.00 0.00 .........................................................................................AGACTATGTAGAGAGTGAGGGA............................................ 22 2 0.50 0.00 0.00 0.50 .........................................................................................AGACGATGTAGAGAGTGAGGGA............................................ 22 2 0.50 0.50 0.00 0.00 ..................................................................................................AGAGAGAGAGGGAGAGAGA...................................... 19 35 0.03 0.03 0.00 0.00 .................................................................................................CAGAGAGTGAGCGAGAGAGC...................................... 20 3 0.33 0.00 0.00 0.33 ..............................................................................................ATGTAxAGAGTGAGGTAGA.......................................... 18 2 0.50 0.00 0.50 0.00 ........................................................................................TAGACGATGTAGAGAGTGAAG.............................................. 21 2 0.50 0.00 0.00 0.50 ........................................................................................TAGATGATGTAGAGAGTGAGGT............................................. 22 2 0.50 0.50 0.00 0.00
697	super_4:3031753-3031907 -	96.16	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TATGTTTGGTTGTTTTTCCTTTCTTTTCTTTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATACAATAACAGCTCATTGTGCTGAGCGTCCAGCCT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................................................................................GACGATGTAGAGAGTGAGGGAGA.......................................... 23 2 2.50 0.50 0.00 2.00 ...................................................CTCTxTTAACATTGAGCTGT.................................................................................... 19 2 2.00 0.00 2.00 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGAGA.......................................... 22 2 1.00 0.50 0.50 0.00 ...........................................................................................ACGATGTAGAGAGTGAGGGAG........................................... 21 2 0.50 0.50 0.00 0.00 ......................................................................................GCTAGACGATGTAGAGAGTGAGGGAGA.......................................... 27 2 0.50 0.50 0.00 0.00 .........................................................................................AGACTATGTAGAGAGTGAGGGA............................................ 22 2 0.50 0.00 0.00 0.50 .........................................................................................AGACGATGTAGAGAGTGAGGGA............................................ 22 2 0.50 0.50 0.00 0.00 ..................................................................................................AGAGAGAGAGGGAGAGAGA...................................... 19 35 0.03 0.03 0.00 0.00 .................................................................................................CAGAGAGTGAGCGAGAGAGC...................................... 20 3 0.33 0.00 0.00 0.33 ..............................................................................................ATGTAxAGAGTGAGGTAGA.......................................... 18 2 0.50 0.00 0.50 0.00 ........................................................................................TAGACGATGTAGAGAGTGAAG.............................................. 21 2 0.50 0.00 0.00 0.50 ........................................................................................TAGATGATGTAGAGAGTGAGGT............................................. 22 2 0.50 0.50 0.00 0.00
746	super_8:1447869-1448014 -	48.03	TGTGTTTGGTTGTTTTTCCTTTCTTTTC----TCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCA-----------------------TTGTGCTGAGCGCCCAGCCT T----------------TCTCTCCTTTCTGTCTCTCTCTCTGTCGCTCCCCCCCTTTCTAACCAAATCCA----------TCATGCAAGTACAGTTAGCTGTA----------ACGACGACAACTACAACAACAACGAAACTGTTATGACGCTGTGTTGTTGTCATTTCACGTGCACAGCCT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .................................CTCTCTCAGTCGCTTCCC................................................................................................................................... 18 1 33.00 0.00 30.00 3.00 ................................TCTCTCTCAGTCGCTTCCC................................................................................................................................... 19 1 2.00 0.00 1.00 1.00 ...........................................................................................................................CTACAACAACAACGAAACTGTT..................................... 22 1 1.00 0.00 1.00 0.00 ............................................................................................AGTTAGCTGTA----------AxGATGAC............................................................. 18 1 1.00 0.00 1.00 0.00 .........................TTCTGTCTCTCTCTCTGTCGC........................................................................................................................................ 21 1 1.00 1.00 0.00 0.00 ................................GCTCTCTCAGTCGCTCCCC................................................................................................................................... 19 1 1.00 0.00 1.00 0.00 .....................................................................................................................................ACCGAAACAGTTATGACG............................... 18 1 1.00 0.00 1.00 0.00 .................................CTCTCTCAGTCGCTACCC................................................................................................................................... 18 1 1.00 0.00 1.00 0.00 ........................................................................................................................................................TGTGTTGCTGTCATTTCA............ 18 1 1.00 0.00 0.00 1.00
382	super_17:1497281-1497447 +	45.29	TGTGTTTGGTTG---------TTTTTCCTTTCTTTT--CTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACG-ATGTAGAGAGTG-----AGGGAGAGAGCGAATAGAATAACA----GCTCATTGTGCTGAGCGCCCAGC--CT TGCCTTTCGTTCCTATACCGATTTTCCCTTCCATTTCTCACTCCATTTTCCATTTCCCGGCTCTTTGTTTACGTCATGTTG-----------TACATGCTAAGCCGACAAATCGGTTGCGATTGATTAAAGTGCGACTCGAGCCGCACGGCATCCATCCCTCCGATTGTCCGATTGCT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...............TACCGATTTTCCCGTCCC................................................................................................................................................. 18 1 1.00 0.00 1.00 0.00 .........................................................................................................GACATTTCGGTTGCGATTG...................................................... 19 1 1.00 0.00 1.00 0.00 ..................................................................................................................GATGCGATTGATTAAAGTT............................................. 19 1 1.00 0.00 1.00 0.00
733	super_6:3012146-3012286 -	40.71	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTC------TCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCC--T AGGATTTGCCTTACTGAACTTTAAAGCAGTGGTTTTTACATCTT-------GGGTTATACCATTCTTACAGACACGTTTCTGCGGCCCATGGGTCCAACAATGCTGGGAACAGC---------------AACAGCAGCGTTTGGAGCTTAAATGCCAGTAGCG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .................................................................................................................A---------------AACAGCAGTGTTTGGAG................. 18 1 1.00 0.00 1.00 0.00 .................................................................................................................A---------------AACAGCAGTGTTTGGAGCT............... 20 1 1.00 0.00 1.00 0.00 ...........................................................................................................GAACAGC---------------GACAGCAGCGATT..................... 20 1 1.00 1.00 0.00 0.00
334	super_15:416543-416668 +	40.52	TGTGTTTGGTTGTTT--------TTCCTTTCTTT--------TCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TGTCTCCTGTCCTGTCCTTTCCCTTCCTTTCCTTCCTTTTCATTTTTTCGTTTCGTTCTCTGCTCCTTGCCATTTGAAGTAGTATCGTGTGTCAGGGCGAATCTTCATTCATATAGTGAGTAGTGG--------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ......................................................GTTTTCTGCTCATTGCCA................................................................................................... 18 1 1.00 0.00 1.00 0.00
461	super_37:309615-309733 +	40.29	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTC------TCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TGTATCGGTATTTTTTTCGTTTTTGCACTTGCCGTGTCGACGGGAAAATTACCAGCACTTTATTTTATTTGAGGTGA--------------------GCGAGGGAGAGAGAGAGAGAGCGAGCGAATTGAGAGAGAGTT---------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...................................................................................................GAGAGAGAGAGAGAGAGA............................................ 18 34 0.09 0.00 0.09 0.00 .......................................................................................................GAGAGAGAGAGAGAGAGA........................................ 18 34 0.09 0.00 0.09 0.00 ....................................................................TTGAGGTGA--------------------ACGAGGGAGC...................................................... 19 1 2.00 2.00 0.00 0.00 ...................................................................................................GAGGGACAGAGACAGAGA............................................ 18 4 0.25 0.00 0.25 0.00 ...................................................................................................GAAAGAGAGAGAGAGAGAGC.......................................... 20 16 0.06 0.06 0.00 0.00 ........................................................................................................AGAGTGAGACAGAGCGAG....................................... 18 2 0.50 0.50 0.00 0.00 ............................................................................T--------------------GCGAGGGAGAGAGAGAGA.............................................. 19 2 0.50 0.50 0.00 0.00 .................................................................................................GCCAAGGAGAGAGAGAGA.............................................. 18 3 0.33 0.00 0.33 0.00 .........................................................................................................GAGAGAGAGAGAGCGAGC...................................... 18 1 1.00 0.00 1.00 0.00 ....................................................................................................AAGGGGAGAGAGAGAGAG........................................... 18 3 0.33 0.00 0.00 0.33 ............................................................................A--------------------GCGAAGGGGAGAGAGAGA.............................................. 19 4 0.25 0.00 0.25 0.00 ............................................................................A--------------------GCGAGCGAGCGAGAGAGAG............................................. 20 1 1.00 0.00 0.00 1.00 ...................................................................ATTGAGGTGA--------------------ACGAGGGA........................................................ 18 1 1.00 0.00 1.00 0.00 .........................................................................................................GAGAGAGAGAGAGAGAGCT..................................... 19 18 0.06 0.06 0.00 0.00 .........................................................................................................GAGAGAGACAGAGAGAGC...................................... 18 23 0.04 0.00 0.00 0.04 ..........................................................................................................AGAGCGAGAGAGCGAGAGA.................................... 19 14 0.07 0.07 0.00 0.00 .......................................................................................................GAGAGAGAGAGAGAGAGG........................................ 18 50 0.02 0.02 0.00 0.00 .......................................................................................................GAGAGCGAGAGCGAGCGAGC...................................... 20 1 1.00 1.00 0.00 0.00 .......................................................................................................GAAAGAGAGAGAGAGAGAGC...................................... 20 16 0.06 0.06 0.00 0.00 ..........................................................................AGA--------------------GCGAGAGAGAGAGAGAGA.............................................. 21 23 0.04 0.00 0.00 0.04 .......................................................................................................GAGAGAGAGCGAGAGCGG........................................ 18 3 0.33 0.00 0.33 0.00 .....................................................................................................GAGAGAGAGAGAGAGAGG.......................................... 18 50 0.02 0.02 0.00 0.00 ..........................................................................TAA--------------------GTGAGGGAGAGAGAG................................................. 18 1 1.00 0.00 0.00 1.00 .....................................................................................................GAGAGAGAGAGAGAGAGCT......................................... 19 18 0.06 0.06 0.00 0.00 ............................................................................A--------------------GCGCGAGAGAGAGAGAGA.............................................. 19 16 0.06 0.06 0.00 0.00 ............................................................................T--------------------GCGAGGGAGCGAGAGAGA.............................................. 19 1 1.00 0.00 0.00 1.00 .......................................................................................................GAGAGAGAAAGAGAGCGAGA...................................... 20 11 0.09 0.00 0.09 0.00 ......................................................................................................GGAGAGAAAGAGAGAGCGAGG...................................... 21 2 0.50 0.50 0.00 0.00 .........................................................................................................GAGAGAGAGAGAGAGAGG...................................... 18 50 0.02 0.02 0.00 0.00 .....................................................................TGAGGTGA--------------------ACGAGGGAGC...................................................... 18 1 1.00 0.00 1.00 0.00 ...................................................................................................GAGAGAGAGAGAGAGAGG............................................ 18 50 0.02 0.02 0.00 0.00 .....................................................................................................GAGAGAGACAGAGAGAGC.......................................... 18 23 0.04 0.00 0.00 0.04 ....................................................................................................AGTGAAAGAGAGAGAGAG........................................... 18 22 0.05 0.00 0.00 0.05 .........................................................ATTTATTTTATTAGAGGT...................................................................................... 18 1 1.00 0.00 1.00 0.00
249	super_10:2799515-2799632 +	39.83	TGTGTTTGG-TTGTTTTTCCTTTCT------TTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT-------------------- TTGGCTTTGGCTTAAACTCACTTCCACTCTCTCTCTCTCTCTCTCTCTCAATCACTCTCTCTTCCGCTGTGGCTCTCTCTTGGCTGTGCT----------------------------------------------------------------CTCAACTCGGCGGAGAGTACGAGTGGAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .....................................................................................GTGCT----------------------------------------------------------------CTCAACxCGGCGGAG............. 19 1 2.00 0.00 2.00 0.00 ................................................................CGCTGTTGCTCxCTCTTGGCTGT............................................................................................... 22 1 1.00 1.00 0.00 0.00 ..........................................................................................................................................................CTCAACTxGGCGGTGAGTACG....... 20 1 1.00 1.00 0.00 0.00 ........................CACTCTCACTCTCTCTCTCTCG........................................................................................................................................ 22 5 0.20 0.00 0.00 0.20
541	super_0:1780900-1781055 -	37.85	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGA--------ATAGAATAACAGCTCATTGTGCTGAGCGCCCA--------GCCT TTTGTTTACAATTTTTACCCCCCTTATATAGTTGTATATACACATATATATATATA---------------TGTATATATGTGTATGTTAGTATTTATAACAAAAACAAACCAGTGCTGTAATTGTGACAGTTGACTAACTCTTTGCGTGGAAAACTCTTTATTGCCGCTT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..................................................TATATC---------------TGTATATGTGTGTA...................................................................................... 20 1 2.00 1.00 1.00 0.00 .................................................ATAAATA---------------TGTATATGTGTGTA...................................................................................... 21 2 0.50 0.50 0.00 0.00 .......................................................................................TTAGGATTTAGAACAAAAA................................................................. 19 1 1.00 0.00 0.00 1.00 ....................................TATGCGCATATATATATATA---------------.................................................................................................... 20 6 0.17 0.00 0.00 0.17 ....................................................TATA---------------CGTATATATGTGTATGC................................................................................... 21 1 1.00 0.00 1.00 0.00 ...................................................ATATA---------------TGCATATATGGGT....................................................................................... 18 1 1.00 0.00 1.00 0.00 ..................................................TATATx---------------CGTATATATGTGTATA.................................................................................... 21 3 0.33 0.33 0.00 0.00 .................................................ATATATC---------------TGTATATGTGTGT....................................................................................... 20 1 1.00 0.00 1.00 0.00 ...............................................ATACATATT---------------TGTATATAT........................................................................................... 18 28 0.04 0.00 0.04 0.00 .................................................ATATATC---------------TGTATATGTGTGTA...................................................................................... 21 1 1.00 0.00 1.00 0.00
782	super_12:198917-199045 -	34.69	TGTGTTTGGTTGTT---------------TTTCCTTTCTTTTCTCTCC---GTCTCTCTCTTT--CCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TCTGGCCCTGGCCCTGGATCTCGACGAGAGCGCCTTTCCCTTCGAGCTGACATCCGACTATGGCACCCTGTCGCCGCTCA--C----CAGTCCCA----------------------------------------GGCAGTTCAATTACGTGTGGGTGGGCCAGGACTCCAGCCA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........GGTCCAGGATCTCGACGA.................................................................................................................................................... 18 1 1.00 0.00 1.00 0.00 ..........CCCCTGGATCGCGACGAG................................................................................................................................................... 18 1 1.00 0.00 1.00 0.00 ................................................................................................................................................ATTGCxTGTGGGTGGGCCA............ 18 1 1.00 0.00 0.00 1.00
237	super_10:758673-758869 +	31.14	TGTGTTTGGTTGTTTTTCCTTTCT------TTTCTCT-------------CCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGC--GA-AT-----------------------AGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TGTAGTCGGTGGTTTCGGATCGTTCGTGATGTTCTCTGAACAAGGTTTTGTCACATCCCTTGACTCCTTCGGCTCCTCTTGTTTAGCCATTTGTCCATCACTGATGTTCACCAATGAAATCTGGAGCGGAGCTT--TTA-CATCAAACTTAAACCCGGCTGGCAGCCGCAAATTCGGCAGTGGTGCAGGATGCCTTAGAG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ....................................................................................................................................................................................................TCAG 19 3 5.00 0.00 0.00 5.00 ......................................................................................................................................................................................................AG 19 3 1.33 0.00 0.00 1.33 ........................................................................................................................................................................CAAATTCGGCGGTGGAGCAGG........... 21 1 1.00 0.00 0.00 1.00 ......................................................................................................................................................................................................AG 19 3 0.33 0.00 0.00 0.33 .....................................................................................................................................................................................................CAG 20 3 0.33 0.00 0.00 0.33
877	super_47:41743-41813 -	29.41	TGTGTTTGGTTGTTTTTCCTT-----TCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TGGGTCTCGTCTCTGTCTCTGTCTCGTTCTCTCTCTCTGTCTCTCTTTTCCTCTCTCCCTCTCGCCGTTGA----------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .......................................TCAGTCTTTTCCTCTCTCC...................................................................................................... 19 3 2.00 0.00 0.33 1.67 ..................................................................ATTGG----------------------------------------------------------------------------------------- 18 2 0.50 0.00 0.50 0.00 ..................................................................GTGTA----------------------------------------------------------------------------------------- 19 2 0.50 0.50 0.00 0.00 .......................................TCACTCTTTTTCTCTCTCC...................................................................................................... 19 3 0.33 0.00 0.00 0.33 ...............................................................GCCGTTTG----------------------------------------------------------------------------------------- 18 2 0.50 0.00 0.50 0.00 .....................................................................GA----------------------------------------------------------------------------------------- 18 3 0.33 0.00 0.33 0.00 ...................TGTCTCGTTATCTTTCTCTGT........................................................................................................................ 21 1 1.00 1.00 0.00 0.00
687	super_4:2738567-2738641 -	29.41	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGT---TTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TTTTTT----TTTTTTTCCTTGCTCCCCACCCCATTTCTTTTTATTCCACTTTTGTGTGTTCTGATAGCGCGTTCTTAT------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head TTTTTT----TTTTCTTGCTTGCT...................................................................................................................................... 20 1 1.00 0.00 1.00 0.00
165	super_4:1777101-1777165 +	28.76	TGTGTT-TGGTTGTTTTTCCTTTCTTT-TCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TTTGTTGTAGTTGTTTATCTTGTCTCTCGCTCTCTCACTCTGTGTTTCTCTGTCTCTGTTGCTCT-------------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head
813	super_20:415223-415291 -	28.58	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT T---------TGTGCTCTATGCTCTTATTGTCTGTCTCTCTCTCTCTCTGACTCTTTTGGAATTG--ATGTTGTGTACTT--------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ........................................................TTGTAATTG--ATGTTGAGTA.............................................................................. 19 1 1.00 0.00 0.00 1.00 ..............................TCAGTCTTTCTCTCTCTC........................................................................................................... 18 8 0.13 0.00 0.13 0.00
189	super_5:618523-618602 +	28.1	TGTGTTTGGTT--GTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT TATGTAAACTTTAGTGCTTCCCAGACTTTCCTTCCCCATTTCGATTTCAATTTCGATGCTGATTGCGTGTTGTTATGTTC----------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...................................CTATTTCGATTTCGATTTCG...................................................................................................... 20 1 1.00 0.00 1.00 0.00
395	super_21:299289-299354 +	27.45	TGTGTTTGGTTGTTTTTCCTTTCT-TTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT G--------CCGCTTTTACTCTCTCTCTCTCTCTATCTATCTATCTCTATCTCTCTTTATCACTCAATCTCTCT---------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........................................................................T---------------------------------------------------------------------------------- 20 14 0.29 0.00 0.00 0.29 .........................................................................T---------------------------------------------------------------------------------- 18 30 0.13 0.00 0.00 0.13 .......................................................................TTT---------------------------------------------------------------------------------- 22 40 0.10 0.03 0.08 0.00 .........................TATCTATCTATCTATCTATCT.............................................................................................................. 21 15 0.20 0.07 0.00 0.13 .........................................................................T---------------------------------------------------------------------------------- 19 20 0.10 0.05 0.00 0.05 ........................................................................AT---------------------------------------------------------------------------------- 21 22 0.05 0.00 0.05 0.00 ................................CTATCTATCTATCTCCAG.......................................................................................................... 18 1 1.00 0.00 1.00 0.00 .........................................................................A---------------------------------------------------------------------------------- 19 40 0.03 0.00 0.00 0.03 ........................................................................AT---------------------------------------------------------------------------------- 19 40 0.03 0.00 0.00 0.03 .........................................................................T---------------------------------------------------------------------------------- 20 20 0.05 0.00 0.00 0.05 .........................................................................T---------------------------------------------------------------------------------- 20 28 0.04 0.04 0.00 0.00
247	super_10:1689728-1689794 +	26.8	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT T------------------CTTTTTCTCTCTCTGTCGCTC--TCTGCCGCTCTCTAATTCACGTGGGTTTTCATGTTCATATGTGTG-------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head
87	super_1:8826015-8826085 +	26.14	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCT-------CTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT AGTAGTTTGTGTTATTCTCTACCTAAAATCTCTATCTCTCTATCTCTGCATTCTTTCGCTCATTTAACATT------------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head
660	super_3:3045189-3045259 -	25.49	TGTGTTTGGTTGTTTTTCCTTTCTT-TTCTCTCCGTCTCTCTCTTTCCCTCT---CTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT CGTTTGTAATTGATGTTGTTCGCTGGCGTTGTCCGTTGTTATTTTTCACTTTTGGCTTTGTTTGCGGTTAG---------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .......AATTGATGTTGTTTGTTGG..................................................................................................................................... 19 1 1.00 0.00 1.00 0.00
432	super_34:280400-280456 +	24.84	TGTGTTTGGTTGTTTTTCCTTTCTTTTCTCTCCGTCTCTCTCTTTCCCTCTCTCTGTTTACATTGAGCTGTTTTGTCCGTGCACGTGCTAGACGATGTAGAGAGTGAGGGAGAGAGCGAATAGAATAACAGCTCATTGTGCTGAGCGCCCAGCCT T-------------------GTCTGTTATGGCTATCTCTGTCTGTCTCTCTCTCTATTTAAATATGTCTGTCCTTT------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ....................................TCAGTCTTTCTCTCTCTC..................................................................................................... 18 8 0.13 0.00 0.13 0.00