Possible Orthologs for dme-mir-4955

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrX:1743323-1743545 -	76.5	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCT------------------------CTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCTGATGTCAAATCACCGATTTGTTTCCCCCTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATATCTATCTCAGTCTGGGCCCAAGTGTCTGTCCCTGTCTGACGCTTAATTGTTGCCCAATTGCGAATTAATGTC-GGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................................................ATCTATCTCAGTCTGGGCCCAAGT............................................................................................................... 24 1 2.00 0.00 2.00 0.00 0.00 ...............................................................AATCATAATCTCAGGATG............................................................................................................................................... 18 1 2.00 0.00 2.00 0.00 0.00 .........................................................................................ATCTATCTCAGTCTGGGC..................................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 .......................................................................................................................CCCTGTCTGACGCTTAATTGTTGCCC............................................................................... 26 1 1.00 0.00 0.00 0.00 1.00 ...................................................................................................................................................................................................GTAACCACAACCTGCCAGCC......... 20 1 1.00 0.00 0.00 0.00 1.00 ...............................................................................................................................................................GTC-GGGGCTTTTTTTCTCCG............................................ 20 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................................................................GTCTGACGCTTAATTGTTGCCC............................................................................... 22 1 1.00 0.00 0.00 0.00 1.00

droSec1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_10:2212704-2212927 -	76.61	T-TGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTC------------------------TGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTTGCTGATGTCAAATCACCGATTTGTTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATATCTATCTCAGTCTGGGCCCAACTGTCTGTCCCTGTCTGACGCTTAATTGTTGCTCAATTGCGAATTAATGTC-GGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .................................................................................................................................................................................................GCCGTAACCACAACCTGCCAGC.......... 22 1 1.00 0.00 1.00 0.00 ......................................................................................................................................................................................................AACCACAACCTGCCAGCCGT....... 20 1 1.00 0.00 1.00 0.00 .........................................................................................................................................................................................................CACAACCTGCCAGCCGTTT..... 19 1 1.00 0.00 1.00 0.00 ......................................................................................................................................................................................................AACCACAACCTGCCAGCCG........ 19 1 1.00 0.00 1.00 0.00
2	super_188:1275-1327 -	24.82	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC T-------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTCCGTGCAGTGCCATAGCCGTAG-CACAATCTGCCAGC-GTTTAAAGC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrX:5905985-5906183 +	89.31	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTA-----ATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCTGATGTG--TTCACCGATTTGTTTCCCCTTTTTCCGTGCGCCGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTC----CCTGTCTCTGTCTTACGCTTAATTTAATTGTCGCTCAATTGCGAATTAATGTCGGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCAAAACCTGCCAGCCGTTCAAAGC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
2	chrX:5905966-5906173 +	43.81	T-------------------TGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTA-----ATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TCACTAAAGCCAACACTTTTTGCTGATGTG--TTCACCGATTTGTTTCCCCTTTTTCCGTGCGCCGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTC----CCTGTCTCTGTCTTACGCTTAATTTAATTGTCGCTCAATTGCGAATTAATGTCGGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCAAAACCTGCCAGC---------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scaffold_4644:2389120-2389318 -	90.63	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCT--CTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCTGATGT--GTTCACCGATTTGTTTCCCCTTTTTCCGTGCGCTGAGAAAAAAATCCCCAGAAACCTAATATCAGGATGCTCTCTGTCTCCCTGTCTCTGTCTCACGGCAAATTGTTGCTTAATTGCGAATTAATGTC-GGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCGACCGTTTAAAGC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...............................................................................................................................................................................AACCACAACCTGCCGACCGTT...... 21 1 1.00 1.00 0.00 0.00 0.00 ..............................................................................................................................................................................TAACCACAACCTGCCGACCGTT...... 22 1 1.00 1.00 0.00 0.00 0.00 ...............................................................................................................................................GGCTTTTTTTCTCCGTGCAGTT..................................... 22 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................................................................................TTTTCTGCATGCAGTGCCA.................................. 19 1 1.00 0.00 1.00 0.00 0.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000453927:241567-241837 -	39.07	TTGCTGATGTCAA---------------------ATCACCGATTTGCTTCCCC-----TTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACAT--AAT----------------------ATCAGGATGCTCT------------------------------------------------------------------CTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCT-TTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCTGATGTCGGGAAACGCGTCCCGTTTCTGTGTTCTCCGATTTGCTTCCCCCTTTCTTTTATAGTGCACAGAGAAAAAATGCATCAAAAACTAATAATAAATCCTTTTTAGAACAAAAAAAAAAGAATATTCACAATTACTAAGTGAAACATCTTTTCGTAATCAACGATCTTTTTGTTTTAAGTAATAAGTTTTCAATCTATC----------------------------------------------TCGGGTGCTATTTTTTCTCTGTGCAGTGCCATAACCGTAACCACATCCTGCCAGCCGTTTAATAC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409277:126495-126773 -	37.39	TTGCTGATGTCAAA---------------------TCACCGATTTGCTTCCCCTTT---------TTCCGTGCGCGGAGAAAAAAA--TCCCCAGAA---------------------------ACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCT-------------------------TAATTGTTGCTCAATT-GCGAATTAATGT------CTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCTGAAATCGGGAAACGCGTCCCGTTTCTGTGTTCTCCGATTTGTTTCCCCCTTTATTTTTTTATTAGTGCACCGAGAAAAAATCGACCATAGAATTCAGATTTTAAAGTATTTTATAGATTAATTAATGTTAGGAG-TT-----------TTTATGCCTAAAGCAGGGGACACATTGTTTTCTATAGTTTCTATAGTTTTTCAATTAACGTATTAATAAATTATTTCGGGGCTTTTTTTCTCTGTGCAGTGCCATAGCCGTAACAACAACCTGCCAGCCGTGAAAAAC Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000301760:4721669-4721893 +	49.9	TTGCTGATGTCAAA---------------------TCACCGATTTGCTTCCCCTTT-TTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTC-----------------------------------------------------------------TCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCTGATATCGGGAAACGTGTCCCGTTTCTGTGCTCTCCGATTTGTTTACCCTTTCCTAAGTGCACCGAGAAAAAACGCCCC------------TAAGAATGCTAAAAAAAAAGCTAGGAGAAAATATCCTTCAAAGAGAATTTAAATCAAAATGAATTGCCTTTAATAACCC----------------------------------------------ATTTC-GGGGACTTTTTTCTCTGTGCAGTGCCATAGCCGCA---ACAACCTGCCAACCTTTTGAAAC Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415151:362895-363093 +	56.29	TTGCTGATGTCA---AA---------------------TCACCGATTTGCTTCC-CCTTTTTCCGTGCGCGGAGAAAAAAA---TCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCT-------GGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCTGGTATCGGGAAACGTGTCCCGTTTCTGTGCTCTCCACCAAACTGTTTCCCCCTTTTTTAGTGCACCGAGAAAAAACACCTCCTTAGGAATAGAAT-----------------------------CCAAC---TTATTATTG----AGTAAGATCTAATATCCAATCTTGGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACAACAACCTGCCAACCGCTTAAAAC Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000491011:764569-764826 -	38.52	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGG------------AGAAAAAAATCCCCAGAA----------ACATAATATC-----------AGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTC--------------------------------TGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTGCCAAATTCAAAA--CCAA-AAATATCCATTTTTTAAATATACAATAATTAACTTTAAAGAAAAAATCTTCGTTAATGTTTTAAAAAATAATAATTTATTATCCTTTGAATAATTT----CACCATTATCATGCTATGTTAATTTTTTAAACATTTGCCAATGAGCGTTTTACTGAAATACAGAACTAATTGAATTTTTCGTGGGATATTTTTTCTCTGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAGAC Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000779506:556816-557127 -	27.46	TTGCTGATGTCAA---------------------ATCACCGATTTGCTTCCCCTTTT-TCCGTGCGCGGAGAAAA--------AAATCCCC-AGAAA------------------------------------------------------------------------------------------CATAATATCAGGATGCTCTCTATCTCTG------TCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTT----------------------TTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC CTGCTGATGATGGGAAACGCGTCCCGTTTCTGTGCTCTCCGATTTGTTGTCTCTTTTTTTTAGACGAGAAAAAAACAGTTAAAGAATTTCCAAGAAAGCATTGAAATCAAACAAAAACCATATATTATTCTAAAAATAGTCCGTTTACCATAGTGAAATTAAGGTTTTAAAACCTAATTATCCTTTAAGTAATCTCACCATGCTATATCATTTTGAAAGCATTTCT-------------------------------------TTTTGGGCGTTTTTCTAAAATACCAAAGTATATTTTTCTCTGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCTTTTAAAAC Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302258:595697-595976 -	32.56	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCC-----------------CAGAAACATA--ATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTG----------------------------------------------------------------------------------------------GGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACA-ACCTGCCAGCCGTTTAAAGC TTGTTTACTTTAA---------TTTTTTTTTTTTTTTTGTTGCACAGAGACAAAAATAGTTTTCTTTGCTAAAATATAAAAAATATACGAGAGCAGAAT-TTATATATATATATATTTTTCTA---CTTAA--------------------AATGTATGGAATAATGCTTCTGATAAGTAACTTCAGAGATTCCATTAGATAAGAATATTATATTATAAAGCCGTAAACTAATTTGTCGACATTTTTTCGGTTGATATTTTTATCTCTGTGCAGTGCCATAGCCTTAACCACAAACCTGCCAGCCGTTTAA-AC Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_12929:2354513-2354742 -	44.48	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTT-----------------------------------TCCGTGCGCGGAGAAAAAAATCCCCAGAAA---------------------------------------------------CATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC GTGTTTCTTCCAAATCTTCACTTCTCTTCTCTTTTCTTTTCTTTCCTTCTTCTGTTTTTTTTTTTTGTTGGTCCCTGCACGGAGAAGAAGTTGTTAGGACATTAGAGTGGACCTTAGTGTGGTTAATAGATCATATGACTCATTGTCCTTGCAATTATTTCACAACTCGCTCCACTTT--------------------------------------------------------TCTCTCTGTGCAGTGCCATAACCGTAACCACAACCTGCCAGCCGTTCAAAAA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .........................................................................................GTTGTTAGGACATTAGAGTG................................................................................................................................................................................. 20 1 1.00 0.00 0.00 0.00 1.00 .................................................TTCTGTGTTTTTTTATTGTT......................................................................................................................................................................................................................... 20 1 1.00 0.00 0.00 0.00 1.00 .......................................................................................AAGTTGTTAGGACATTAGAGTG................................................................................................................................................................................. 22 1 1.00 0.00 0.00 0.00 1.00 ..............................................TTCTTTTGTTTTTTTTTTTTT........................................................................................................................................................................................................................... 21 23 0.04 0.00 0.00 0.00 0.04

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396434:346903-347133 -	42.33	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCC-------------------GTGCGCGGAGAAAAAAATCCCCAGAAACATAA---------TA--------------------------------------------------------------TCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATT-GCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAACCTGCCAGCCGTTTAAAGC TTTT--ATT-----------TTTTATTTCCTCTTCTTCCCTCTTGTTTTTTTTGGTTCCTGCACAGAGAAAAAGTTC--TAGGACCTTAGAGTGGACCATATTTGTTGCCTATAAAGTGTTCTATAGATTCTAAGATCCTTGAGGGATTTGTATGACTAATTTTTAGAA------------------------------TAATTATTTTACAACTTGC----------T--TGAATTTTTCTCTCTGTGCAGTGCCATAACCGTAACCACAACCTGCCAGCCGTTCAA--- Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	chrXL_group3a:2134676-2134849 -	41.15	TT--GCTGATG-------------TCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTG--TCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAA-CCACAACCTGCCAGCCGTTTAAAGC TTTCGCTGATTCGGGAATATATTCTCCACCCCCCCACCCTCTA-CCATTTCCTCTTCTGCTGACCTA----------------------CACGATTTTCCCCCTCTCTCTTAACGATCTTAACGCTCCACTCTTTC---------------------TGTCTCTCTCGATTTTTGCAGTGCCATAGCCGTAAAACACTGTCTTCCTACCGTTTACCGT Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ..................................................................................................................................................................................TGCCATAGCCGTAAAACA...................... 18 1 1.00 0.00 1.00 0.00 0.00 .......................................................................................................................................C---------------------TGTCTCTCTCGATTTTTGCAG........................................ 22 1 1.00 0.00 1.00 0.00 0.00

droPer1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
9	super_13:248212-248305 -	28.86	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCT-CAATTGCGAATTAATGTC-TGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAA-CCACAACCTGCCAGCCGTTTAAAGC T----------------------------------------------------------------------------------CTCTGGCTCTGTCTCTGTCTCAGGCGTAACAGGTGCGTTGAGTGCATTTCAATTGTAT-GGATA-------ATTGTGCTGTATTGTAATTGAAATCCACAA------------------- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ....................................................................................TCTGGCTCTGACTCTGGC..................................................................................................... 18 1 2.00 0.00 0.00 0.00 0.00 2.00 ...................................................................................CTCTGTCTCTGTCTCTGCC..................................................................................................... 19 11 0.18 0.00 0.00 0.00 0.00 0.18 .....................................................................................CTGTCTCTGTCTCTGTCCC................................................................................................... 19 4 0.50 0.00 0.00 0.00 0.00 0.50 ...................................................................................CTCTGTCTCTGTCTCTGTCT.................................................................................................... 20 4 0.50 0.00 0.00 0.00 0.00 0.50 .........................................................................................CTCTGTCTCTGTCTCTGCC............................................................................................... 19 11 0.18 0.00 0.00 0.00 0.00 0.18 .....................................................................................CTGGCTCTGGCTCTGGCT.................................................................................................... 18 2 1.00 0.00 0.00 0.00 0.00 1.00 ...................................................................................CTCTGGCTCTGTCTCTGGCC.................................................................................................... 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ..................................................................................................................................................................CTATTGTAATTGAAAGCCA...................... 19 1 1.00 1.00 0.00 0.00 0.00 0.00 .........................................................................................................................TGAGTGCATTTCxxTTGTAT-GGA.......................................................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ....................................................................................TCAGGCTCTGTCTCTCTC..................................................................................................... 18 7 0.14 0.00 0.00 0.00 0.14 0.00

droWil1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
11	scaffold_181096:12164007-12164188 -	38.37	TTGCTGATGTCAA-----ATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGC-----CGTAACCACAACCTGCCAGCCGT--------------T---------------------------TAAAGC TCGCTGATTTTGGAAAACATTTCTTATTTGCTCTCCTTTAATTTATGTT-----------------------------------------------TTTTT------------TTTGTTGTTGTTCTTTTGTATATT----TTTTATGTTTA--TTTTGTTTGCAGTGCCATAACATAATAATAGTTAATACTTATT----GTGTTCACACAAAAATTTTGGGCCGCCGAATCGAAAACGAATATCAAAAC Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head .................................................................................................................................................ATGTTTA--TTGTGTTTGAA...................................................................................... 18 2 529.50 2.00 511.00 16.00 0.50 .................................................................................................................................................ATGTTTA--TTGTGTTTGCAT..................................................................................... 19 1 5.00 0.00 5.00 0.00 0.00 ................................................................................................................................................AATGTTTA--TTTTGTTTGAA...................................................................................... 19 3 1.33 0.00 1.33 0.00 0.00 .............................................................................................................................................TTTTAGGGTTA--TTTTGTT.......................................................................................... 18 1 3.00 0.00 3.00 0.00 0.00 ..............................................................................................................................................TTTAGGGTTA--TTTTGTTT......................................................................................... 18 3 1.00 0.00 1.00 0.00 0.00 .................................................................................................................................................ATGTTTA--TTGTGTTTGCA...................................................................................... 18 3 0.67 0.00 0.67 0.00 0.00 ................................................................................................................................................AATGTTTA--TTTTGTTTGA....................................................................................... 18 3 0.67 0.00 0.67 0.00 0.00 .................................................................................................................................................ATGTTTA--TTTTGTTTGAAT..................................................................................... 19 4 0.50 0.00 0.50 0.00 0.00 .................................................................................................................................................ATGTTTA--TTTTGTTTGAA...................................................................................... 18 5 0.40 0.00 0.40 0.00 0.00 .......................................................................................................................................................................................AGTTGATACTTATT----ATGT.............................................. 18 1 1.00 0.00 1.00 0.00 0.00 ........................................ATTTATGTA-----------------------------------------------TTTTT------------TTTGA..................................................................................................................................... 19 3 0.33 0.00 0.33 0.00 0.00 ...................................................................................................TT------------TGTGTTGTTGTTGTTTTG........................................................................................................................ 20 2 0.50 0.00 0.00 0.50 0.00 ...................................ATTTAATTTATGTT-----------------------------------------------TTTGT------------.......................................................................................................................................... 19 4 0.25 0.00 0.00 0.00 0.25 ..............................................GTG-----------------------------------------------TGTTT------------TTTGTTGTTGT............................................................................................................................... 19 4 0.25 0.00 0.25 0.00 0.00 ...........................................................................................................................................................TTTGTTTGCAGTGCCATAAC............................................................................ 20 1 1.00 0.00 1.00 0.00 0.00 ...........................................TATGTT-----------------------------------------------GTTTT------------TTTTTTG................................................................................................................................... 18 18 0.06 0.00 0.06 0.00 0.00 .................................................................................................................................................ATGTTTA--TTGTGTTTGGA...................................................................................... 18 2 0.50 0.00 0.50 0.00 0.00 ..................................................................................................................................................................................ATAATAGTTAATACTTATT----GTGT.............................................. 23 1 1.00 0.00 1.00 0.00 0.00 ......................................................................................................................................ATT----TTTTTTGTTTA--TTTAGT........................................................................................... 20 1 1.00 0.00 1.00 0.00 0.00 ................................................................................................TTTTT------------TTTGTTGTTGTTGGT........................................................................................................................... 20 39 0.03 0.00 0.03 0.00 0.00 ....................................................................................................G------------TTTGTTGTTGTTGTTTTGT....................................................................................................................... 20 4 0.25 0.00 0.25 0.00 0.00 .................................................................................................................TTTGTTGTTGTTCTTTGAT....................................................................................................................... 19 3 0.33 0.33 0.00 0.00 0.00 ................................................T-----------------------------------------------TGTTT------------TTTGTTGTTGTTTTT........................................................................................................................... 21 12 0.08 0.08 0.00 0.00 0.00 ..................................................................................................TTG------------TTTGTTGTTGTTTTTTT......................................................................................................................... 20 13 0.08 0.00 0.00 0.08 0.00 .............................................................................................................................................TTTTAGGGTTA--TTTTGTTT......................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ................................................................................................TTTTT------------TGTGTTGTTGTTGT............................................................................................................................ 19 43 0.02 0.00 0.00 0.00 0.02 .......................................AATTTGTGTT-----------------------------------------------TTTGT------------TTT....................................................................................................................................... 18 12 0.08 0.00 0.08 0.00 0.00 ................................................................................................TTTTC------------TTTGTTGTTGTCC............................................................................................................................. 18 2 0.50 0.00 0.50 0.00 0.00 ..................................................................................................TTT------------TTTGTTGTTGTTTTCTTGT....................................................................................................................... 22 3 0.33 0.33 0.00 0.00 0.00 .........................................TTTATGTT-----------------------------------------------TTTGT------------TTCGT..................................................................................................................................... 18 3 0.33 0.00 0.33 0.00 0.00 ....................................................................................................T------------TGTGTTGTTGTTGTTTTGT....................................................................................................................... 20 3 0.33 0.00 0.33 0.00 0.00 .............................................AGTT-----------------------------------------------TTTTT------------TTTGGTGTT................................................................................................................................. 18 10 0.10 0.00 0.00 0.10 0.00 ........................................................................................................................................................................................GTTAATACTTATT----GTGTT............................................. 18 1 1.00 0.00 1.00 0.00 0.00 ................................................................................................TTTTT------------TTTGTTGTTGTTGATT.......................................................................................................................... 21 9 0.11 0.00 0.11 0.00 0.00 .CGCTGATTTTGGAAAACATT...................................................................................................................................................................................................................................... 20 1 1.00 0.00 1.00 0.00 0.00 ...............................................TT-----------------------------------------------TTGTT------------TTTGTTGTTGTT.............................................................................................................................. 19 471 0.00 0.00 0.00 0.00 0.00 ............................................ATATT-----------------------------------------------ATTTT------------TTTGTTGTTGT............................................................................................................................... 21 2 0.50 0.00 0.50 0.00 0.00 .................................................................................................................................................ATGTTTx--GTTTGTTTGCAG..................................................................................... 18 3 0.33 0.00 0.00 0.33 0.00 ....................................TTTAATATATGTG-----------------------------------------------TTTTT------------TTT....................................................................................................................................... 21 1 1.00 0.00 1.00 0.00 0.00 .................................................................................................................................................ATGTTTA--TTGTGTTTGAAG..................................................................................... 19 2 0.50 0.00 0.50 0.00 0.00 ........................................................................................................................................................................................................................TTTTGGGCCGCCGAATCGAAAACGAAT........ 27 1 1.00 0.00 0.00 0.00 1.00 ................................................................................................................................................AATGTTTA--TTGTGTTTGCA...................................................................................... 19 1 1.00 0.00 1.00 0.00 0.00 ........................................................................................................................................................................................................................TTTTGGGCCGCCGAATCGAA............... 20 1 1.00 0.00 1.00 0.00 0.00 ...................................................................................................................TGTTGTTGTTCTTTTGAAA..................................................................................................................... 19 3 0.33 0.00 0.33 0.00 0.00

droVir3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
12	scaffold_12928:1476007-1476072 -	18.69	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGT---AACCACAACCTGCCAGCCGTTTAAAGC---------- TT------------------------------------------------------------------------------------------------------------------------------------------------TGTTTTTACTTGCAGTGCCATAAACATCGTAACCT---TTTTCTTTCTTTATCACGTCTAAACGCAT Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head

droMoj3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	scaffold_6473:13536163-13536218 +	15.08	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCGTGCAGTGCCATAGCCGTAACCACAA--CCTGCCAGCCGTTTAAAGC CG-----------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTCTCTTGCAGTGCCATAAACATCGT---AATTTTTTTCATTTATTTACGTC Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo .....................................................................................................................................................................ATxAACAGCGT---AATTTTTTT.............. 19 1 1.00 1.00 0.00 0.00 0.00

droGri2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
22	scaffold_15203:8273975-8274075 +	22.73	TTGCTGATGTCAAATCACCGATTTGCTTCCCCTTTTTCCGTGCGCGGAGAAAAAAATCCCCAGAAACATAATATCAGGATGCTCTCTATCTCTGTCTCTGTCTAACGCTTAATTGTTGCTCAATTGCGAATTAATGTCTGGGGCTTTTTTTCTCCG-----TGCAGTGCCATAGC---CGTAAC------------------------CACAACCTGCCAGCCGT-TTAAAGC ------------------------------------------------------------------------------------------------------------------------------------AATAGCTGAAATTTGTTTTCCTCATTTCTTGCAGTGCCATAAACATCGTAACCTTTTTTCTTTTTTTTTCTTACGTCAAAACGCATCGATCGCATCAGAGG Size Hit Count Total Norm V109 Male body .....................................................................................................................................................................................................................................CAGG 19 6 0.17 0.17 ...................................................................................................................................................................................................................AACGCATCGATCGCATCAGAGG 22 1 1.00 1.00 ...........................................................................................................................................................................................................TACGTCAAAACGCATCGATC.......... 20 1 1.00 1.00

Generated: 04/20/2012 at 05:20:20 EDT