Possible Orthologs for dme-mir-4948

droSim1 - 12 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
13	chr3R:26523820-26523956 -	95.66	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCACTCCCAGTCGCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGGGTGATCCTGGTTGTGGTGACCACGCCCGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGTT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .............................................CGTCGCGTGGGTGGTCCTG......................................................................... 19 1 1.00 0.00 1.00 0.00 0.00
9	chr2L:19109486-19109616 -	64.46	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT ACACTCCCATCGGCGGTCCGGCACGTGGGCGTAGAGGGCAGCCGGAGTGGCATGCGTCACCCGGGTCGTGGTCACGAAACCCGTTCGCATTCCGTCCACCTGGGCCCACTTGAGGATCGTCTGAAC------GTGGT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...................GGCAxGTGGTCGTAGAGGG................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00
8	chrU:685743-685883 +	59.76	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTG----CCTTGCT GTTCTCCCAATTGCGATCTGCGATGTGGGCATAAACGCCAGCCGGTGATGCATGAGTCACCCGGGCTGTGGTCACCAGACCTGCATCCTTGCCAGCCGCCTGTGCCCACTGCGCTATGCTGTGCACCTGATCCTCCTCGTT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...............................................ATGCATGAGTCACCCGGGCTG......................................................................... 21 1 1.00 0.00 0.00 1.00 0.00
12	chr3R:4626163-4626305 -	59.42	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGAC------CCTGCCTTGCT GTTCTCCCAGTCGCGCTCGGCGATGTGGGCGTACACTCCAGAGGGCGAGGCGTGAGTGACGCGGGTGGTGGTCACCAGACCCGCCCACTTGCCCGCATCCATGGCCCACTTGGCAATGGAGTCGACGTGGGTGCTCTCGTCCA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .....................................................GAGCGACGCCGGTGGTGG........................................................................ 18 1 1.00 0.00 0.00 0.00 1.00
6	chr3L:20773093-20773229 +	57.54	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCTCGAAATCGCGATTCGAGGTGTGCGCATAAACTCCGGCAGGACTGGCGTGCGTAACCCGAGTGGTGGTCACCAATCCGGCTGACTTGCCACCTTTGAGCGCCCAGGCGGCAATCGAAGAGAGCCTATTCTGCG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...CTTGAAATCGCGACTCGA.................................................................................................................... 18 1 2.00 0.00 2.00 0.00 0.00 ........................................................................CACCAATCCGTTTGACTT............................................... 18 1 1.00 0.00 0.00 0.00 1.00
4	chr3L:5104192-5104336 +	56.5	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGC--------CTTGCT GTGCTCCCAATTTCGCTCTGCAACATGGGCATAAACTCCGGCTGGAGAAGCGTGGGTCACCCGGGCGGTGGTAACCACACCGGCCCACTTGCCGGCCTCCTGGGCCCACTGACCAATGCTCTGGACATGGCTACTCGAATTGGTC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo
15	chrX:11959384-11959514 -	55.53	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTC--CTCGCCGCGCCTGCTCACATGGGCGTAGGCACCCGCCGGACTGGCGTCCGTCAAACGGGTGGTGGTCACCACTCCCGTGGCCTTTCCCGCTCGCTGTGCCCACTGGAGTACGGAGTCCACGCGCTC----- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...............................TAGGCACTCGGCGGACTG........................................................................................ 18 1 2.00 0.00 2.00 0.00 0.00
7	chr3R:16011437-16011584 +	53.0	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCT-----------------CTGGACCCTGCCTTGCT GTTCTCCCAGTTCCGGTTGGCCAGGTGGGCGTACACTCCAGCTGGTGAGGCATGTGTTACGGAGGTTGTGGTAACCAGTCCCGTGGCCATTCCCTGCTTCTGTGCCCACGCCGCAATGGAGGACACATGGTGGGCGGCTTGTGCCTGC------ Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................................................................CAACGCCGCAATGGAGGACC............................. 20 1 2.00 0.00 1.00 1.00 0.00 ..........................................................................................................CAGGCAGCAATGGAGGAC.............................. 18 1 1.00 0.00 1.00 0.00 0.00 ........ATTTCCAGTTGGCCAGGT................................................................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 ........................................................................................................................GGAAACATGGTTGGCGGCT............... 19 1 1.00 0.00 0.00 0.00 1.00
1	chr2R:16695923-16696069 +	52.48	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTG----------CCTTGCT GCTCTCGAAGAATCGGTTGGTGGTCTTGGCATAGGCACCTGATGGACTGGCGTGGGTCAGAGTGGTGGTGGTCACGATGCCAGTGGCCTTTCCAGCAGCCTGGGCCCAGGCTGCGATGGAGTCCACCTGGTTGGCCGGATCCTCGCT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................................................................CATGGCTGCGATGGAGTC........................ 18 1 1.00 0.00 1.00 0.00 0.00 ...................................................GTGGGTCAGGCTGGTGGT.............................................................................. 18 1 1.00 1.00 0.00 0.00 0.00 .CTCGCxTAGAATCGGTTGG............................................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ............................................................................................................................GCCAGGTTGGCCGGATCC..... 18 1 1.00 0.00 0.00 0.00 1.00
3	chr2R:16701221-16701371 +	51.51	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCACTCCCACATGCGGTTGGCTGTCTTTGCATATGCTCCCGAGGGACTGGCATGGGTCAGTGTGGTGGTGGTCACAATACCCGTGGACTTTCCAGCGTTTTGGGCCCACTCGGCGATGGAGGTCAGGCGGTTCGCGGGATCCTGACTGGCG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .....CCCACATGTGGTAGGCTG................................................................................................................................ 18 1 2.00 0.00 0.00 2.00 0.00 ..ACTCCCACATGCxGTTGAC.................................................................................................................................. 18 1 1.00 0.00 1.00 0.00 0.00
10	chr3L:5106407-5106557 -	49.73	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTC--------------CATGACGCTCTGGACCCTGCCTTGCT ATTCTCCCATTCGCGATCGGCGACATGGGCGTAGACTCCGGAGGGCGAGGCGTGGGTCACTCGGGTGGTGGTCACCAGTCCAGCAGCTTTGCCCGCATCCATGGCCCATTTGCCCAGGGAGAAGACATGGTTCGTTTCATTGGCCATCGCA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .................................................................................................................................GTTGGTTTCGTTGGCCATC... 19 1 1.00 0.00 0.00 0.00 1.00
2	chr2R:16698351-16698501 +	42.63	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT ACACTGCCACATTCGATTGGCCGTCTTGGTATTTTCTCGACAAGGACTGGCATGGGTCAATTTTTTGGTGGTCACAAATCCCGTGGACTTTGTGGCGTTCTGGGACCATTTACCAATGGAGGTCAGGCGGTTCGCGGGATCCTGGCTGGCG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..............................................................TTTTGGTTGTCACAACTC....................................................................... 18 1 3.00 0.00 2.00 1.00 0.00 ..............................................................................TCCCGTGGACTTTGGGGC....................................................... 18 1 3.00 0.00 3.00 0.00 0.00 ..............................................................................TCCCGTGGACTTTGGGGCC...................................................... 19 1 2.00 0.00 2.00 0.00 0.00 ...............................TTTTCTCGxCAAGGACTGGTA................................................................................................... 20 1 1.00 1.00 0.00 0.00 0.00 ................................TTTCTCGxCAAGGACTGGTA................................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ...............................................................................CCCGTGGACTTTGGGGCC...................................................... 18 1 1.00 0.00 0.00 1.00 0.00 ..............................................................................TCCCGTGGACTTTGGGCC....................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ..............................................................................TCCCGTGGACTGTGTAGC....................................................... 18 1 1.00 0.00 0.00 0.00 1.00 ..............................GTTTTCTCGxCAAGGACTG...................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00

droSec1 - 12 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
11	super_4:5701489-5701625 -	97.1	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCACTCCCAGTCGCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGTGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .......TTGTCGCGGTCGTAGATG................................................................................................................ 18 1 1.00 1.00 0.00 0.00 ...............................TAGGCGGCGGGGGGCGTGGCG..................................................................................... 21 1 1.00 0.00 1.00 0.00 ..........................................................................CCACGCCGGTGCGCTTGCCCTC......................................... 22 1 1.00 0.00 1.00 0.00 .................................................................TTCTAGTGACCACGCCGG...................................................... 18 1 1.00 0.00 1.00 0.00
12	super_7:3043418-3043548 -	64.46	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT ACACTCCCATCGGCGGTCCGGCACGTGGGCGTAGAGGGCAGCCGGAGTGGCATGCGTTACCCGGGTCGTGGTCACGAAACCTGTTCGCATTCCGTCCACCTGGGCCCACTTGAGGATCGTCTGAAC------GTGGT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head
3	super_2:5523378-5523521 +	57.94	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCT-------GCCTTGCT GTGCTCCCAATTTCGCTCCGCAACATGGGCATAAACTCCGGCTGGAGAAGCGTGGGTCACCCGGGCGGTGGTAACCACTCCGGCCCACTTACCGGCCTCCTGGGCCCACTGACCAATGCTCTGGACATGGCTACTCGAATTGGT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................................................................................................CGCTGAACAATGCTCTGGA................... 19 1 1.00 0.00 1.00 0.00
13	super_37:61295-61425 -	56.93	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCT--CCTCGCCGCGCCTGCTCACATGGGCGTAGGCACCAGCCGGACTGGCGTCCGTCAAACGGGTGGTGGTCACCACTCCCGTGGCCTTGCCCGCTCGCTGTGCCCACTGGAGTACGGACTCCACGCGCTC----- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ........................................................TCATAGGGGTGGTGGTCACC............................................................. 20 1 1.00 0.00 0.00 1.00 .........................................................CATAGGGGTGGTGGTCACC............................................................. 19 1 1.00 0.00 1.00 0.00 .......................................................GTCATAGGGGTGGTGGTCAC.............................................................. 20 2 0.50 0.00 0.00 0.50 .........................................................CATAGGGGTGGTGGTCAC.............................................................. 18 2 0.50 0.00 0.00 0.50 .....................................................ACGTCAAACCGGTGGTGGT................................................................. 19 1 1.00 0.00 1.00 0.00
8	super_11:1360198-1360334 +	56.82	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCTCGAAATCGCGATTCGAGGTGTGCGCATAAACTCCGGCAGGACTGGCGTGGGTAACCCGAGTGGTGGTCACCAATCCGGCTGACTTGCCACCTTTGAGCGCCCAGGCGGCAATCGAAGAGAGCCTATTCTGCG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ......................................................GGTGACCCGAGTGGTGGACA............................................................... 20 1 1.00 0.00 0.00 1.00 ............................................................................................CACCTCTGAGCGCACAGGCG......................... 20 1 1.00 0.00 0.00 1.00
9	super_1:3064892-3065036 -	55.86	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT-------- GTTCTCCCAATTGCGATCTGCGATGTGGGCATAAACGCCAGCCGGTGATGCATGAGTCACCCGGGCTGTGGTCACCAGACCTGCATCCTTGCCAGCCGCCTGTGCCCACTGCGCGATGCTGTGCACCTGATCCTCCTCGTTAGCG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ................TCTGCGATGTGGGCATAAACGCC.......................................................................................................... 23 1 1.00 0.00 1.00 0.00
14	super_38:293369-293519 -	53.88	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGAC--------------CCTGCCTTGCT GTTCTCCCAGTCGCGCTCGGCGATGTGGGCGTACACTCCAGAGGGCGAGGCGTGAGTGACGCGGGTGGTGGTCACCAGACCCGCCCACTTGCCCGCATCCATGGCCCACTTGGCAATGGAGTCGACGTGAGTGCTCTCGTCCAGCATGACC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...........................................GACGAAGCGTGAGTGACG.......................................................................................... 18 1 1.00 0.00 0.00 1.00
4	super_9:1402631-1402777 +	52.48	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTG----------CCTTGCT GCTCTCGAAGAATCGGTTGGTGGTCTTGGCATAGGCACCTGATGGACTGGCGTGGGTCAGAGTGGTGGTGGTCACGATGCCAGTGGCCTTTCCAGCAGCCTGGGCCCAGGCTGCGATGGAATCCACCTGGTTGGCCGGATCCTCGCT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...................................................GTGGGTCGGCGTGGTGGTGG............................................................................ 20 1 1.00 1.00 0.00 0.00 ..............................................................TGGTGGTGGTCAAGACGCC.................................................................. 19 1 1.00 0.00 0.00 1.00 .........................................................CATAGGGGTGGTGGTCAC........................................................................ 18 2 0.50 0.00 0.00 0.50 .......................................................GTCATAGGGGTGGTGGTCAC........................................................................ 20 2 0.50 0.00 0.00 0.50
1	super_0:16575540-16575687 +	52.39	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCT-----------------CTGGACCCTGCCTTGCT GTTCTCCCAGTTCCGGTTGGCCAGGTGGGCGTACACTCCAGCTGGTGAGGCATGTGTTACGGAGGTTGTGGTAACCAGTCCCGTGGCCATTCCCTGCTTCTGCGCCCAGGCCGCAATGGAGGACACATGGTGGGCGGCTTGTGCCTGC------ Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ................................................................................................CTTCTGCACCCCGGCCGCA....................................... 19 1 1.00 0.00 1.00 0.00 ..............................................GAGGCATGTGTTACGGAGGTT....................................................................................... 21 1 1.00 0.00 0.00 1.00 ......................................................................................CCATTCCCTACTTCTTCG.................................................. 18 1 1.00 0.00 1.00 0.00
6	super_9:1407902-1408052 +	51.51	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCACTCCCACATGCGGTTGGCTGTCTTTGCATATGCTCCCGAGGGACTGGCATGGGTCAGTGTGGTGGTGGTCACAATACCCGTGGACTTTCCAGCGTTTTGGGCCCACTCGGCGATGGAAGTCAGGCGGTTCGCGGGATCCTGGCTGGCG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .....................................................GGGTCTGTGxGGTGGTGGT............................................................................... 18 2 0.50 0.00 0.00 0.50 ......................................................GATCAGTGTGCTGGTGGT............................................................................... 18 2 0.50 0.00 0.50 0.00
5	super_9:1405038-1405188 +	49.14	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT ACACTGCCACATTCGATTGGCCGTCTTGGCATATGCTCCAGAAGGACTGGCATGGGTCAGTGTGGTGGTGGTCACAAATCCCGTGGACTTTCCGGCATTCTGGGACCATTCCGCAATGGAGGTCAGGCGGTTCGCGGGATCCTGGCTGGCG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .....................................................GGGTCTGTGxGGTGGTGGT............................................................................... 18 2 0.50 0.00 0.00 0.50 ......................................................GATCAGTGTGCTGGTGGT............................................................................... 18 2 0.50 0.00 0.50 0.00 ......................................................................GTCACAAATCTGGTGGAC............................................................... 18 1 1.00 0.00 1.00 0.00
10	super_2:5525547-5525697 -	48.55	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTC--------------CATGACGCTCTGGACCCTGCCTTGCT ATTCTCCCATTCGCGATCGGCGACATGGGCGTAGACTCCGGATGGCGAGGCGTGGGTCACTCTGGTGGTGGTCACCAGTCCAGCAGCTTTGCCCGCATCTATGGCCCATTTTCCCAGGGAGAAGACATGGTTTCTTTCATTGGCCATCGCC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ...................................................GTGGGTCACTCTGGTGGTGGT............................................................................... 21 1 1.00 0.00 0.00 1.00 ......................................................................GTTTCCAGTCCAGCAGCT............................................................... 18 1 1.00 0.00 1.00 0.00

droYak2 - 13 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
12	chr3R:27815996-27816132 -	91.35	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCACTCCCAATCCCGGTCGTAGATGTGGGCGTACGTGGCGGCAGGCGTGGCATGGGTGATCCTGGTGGTGGTGACCACTCCAGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTTTGGACCCTACCTTGCT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ......................ATGGGGGCGTCCGTGGC.................................................................................................. 17 1 1.00 0.00 0.00 0.00 1.00 0.00 ..................................GTGGCGGCAGGTGGGGC...................................................................................... 17 2 0.50 0.00 0.00 0.00 0.50 0.00 ..............................................GTGGCATGGGCGTTCCTGGT....................................................................... 20 1 1.00 0.00 0.00 1.00 0.00 0.00 .................................................GCATGGATxATCCTGGTGGT.................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 0.00
8	chr2R:5924916-5925046 -	66.58	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCACTCCCATCGGCGATCCGGCACGTGGGCGTAGAGGGCAGCCGGAGTGGCGTGCGTCACCCGGGTTGTGGTCACGAAACCCGTTCGCATGCCGTCCACCTGGGCCCACTTGAGGATCGTCTGCAC------GTGGT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........GGCGATCCxGCAGGTGGGCGT......................................................................................................... 20 1 1.00 0.00 0.00 1.00 0.00 0.00
13	chrX:9672483-9672612 -	60.68	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCCTCGCCGCGCCTGCTTACA--TGGGCGTAGGCACCCGCCGGACTGGCGTCCGTCAGCCGGGTGGTGGTCACCACTCCCGTGGCCTTGCCCGCCCACTGTGCCCACTGCAGCACGGAGTCCACCC------GCT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..............CTGCTTACA--TGGGCGTAGG...................................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 0.00 GATACTCGCCGCGCCTGC....................................................................................................................... 18 1 1.00 0.00 0.00 0.00 0.00 1.00
4	chr3L:6151905-6152049 +	59.07	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGAC--------CCTGCCTTGCT GTGCTCCCAGTTCCGCTCGGCGACGTGGGCATAAACACCGGCTGGAGAAGCGTGTGTCACCCGGGCGGTGGTCACCACACCGGCCCACTTGCCGGCCTCCTGGGCCCACTGGCCAATGCTCTGGACATGGGTGCTCGAGTTGGTC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...........................................................CCCGGGCGGTxGACACCA.................................................................... 17 1 1.00 0.00 0.00 0.00 1.00 0.00
5	chr3L_random:440608-440744 +	58.98	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCTCGAAATCGCGGTTCGAGGTGTGCGCATAGACTCCGGCCGGACTGGCGTGGGTAACCCGAGTGGTGGTCACCAGTCCGGCGGATTTGCTACCCTTAAGCGCCCAGGCGGCGATAGAGGAGAGCCTGTTCTGTG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .........................................................................TCCAGTCCGGGGGATTTGC............................................. 19 2 0.50 0.50 0.00 0.00 0.00 0.00 ......................................................GGTAACCGGAGGGGTGGT................................................................. 18 2 0.50 0.00 0.00 0.00 0.50 0.00
10	chr3L:19084634-19084770 -	58.98	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCTCGAAATCGCGGTTCGAGGTGTGCGCATAGACTCCGGCCGGACTGGCGTGGGTAACCCGAGTGGTGGTCACCAGTCCGGCGGATTTGCTACCCTTAAGCGCCCAGGCGGCGATAGAGGAGAGCCTGTTCTGTG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .........................................................................TCCAGTCCGGGGGATTTGC............................................. 19 2 0.50 0.50 0.00 0.00 0.00 0.00 ......................................................GGTAACCGGAGGGGTGGT................................................................. 18 2 0.50 0.00 0.00 0.00 0.50 0.00
7	chr2L:18081661-18081805 -	58.43	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT-------- GTTCTCCCAATTGCGATCGGCGATGTGGGCATAAACGCCGGCCGGCGATGCGTGAGTCACCCTGGCTGTAGTGACCAGCCCTGCATCCTTGCCAGCCGCCTGTGCCCACTGGGCTATGCTGAGCACCCGATCCTCCTCGTTTGCG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..................GGCGATGTGGGxATGAAC............................................................................................................. 17 1 1.00 0.00 0.00 0.00 1.00 0.00 ...........................................GGCGATGCGxGAGGCACCC................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 0.00 ..................GGCGATGCGGGxATAAAC............................................................................................................. 17 1 1.00 0.00 0.00 0.00 1.00 0.00
6	chr3R:5630124-5630274 +	53.29	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGAC--------------CCTGCCTTGCT GTTTTCCCAGTCGCGTTCGGCGATGTGGGCGTACACTCCAGAGGGCGAGGCGTGGGTGACGCGAGTGGTGGTCACCAGACCCGCCCACTTGCCCGCCTCCATGGCCCACTTGGCAATGGAGTCGACGTGGGTGCTCTCGTCCAGCATGACC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head
3	chr2R:17844536-17844686 +	52.7	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCTCTGCCACATTCGATTGGCCGTCTTGGCATATGCTCCCGATGGACTGGCGTGGGTGAGTGTGGTGGTGGTCACAATGCCCGTGGACTTGCCGGCATTCTGGGCCCACTCGGCGATGGAGGTCAGACGGTTCGCGGGATCCTGGCTGGCG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .............................................ACGGGCGTGGGGGAGTG......................................................................................... 17 1 1.00 0.00 0.00 0.00 1.00 0.00 .........................................ATGGACTGGTGAGGGTGA............................................................................................ 18 1 1.00 0.00 0.00 1.00 0.00 0.00 ...................................CTCCCGTTGGACTGCCGT.................................................................................................. 18 2 0.50 0.00 0.00 0.00 0.50 0.00
1	chr2R:17839338-17839484 +	51.85	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTG----------CCTTGCT GCTTTCGAAGAATCGGTTGGTGGTCTTGGCATAAGCACCCGATGGACTGGCATGGGTCAGCGTGGTGGTGGTCACGATGCCAGTGGACTTTCCGGCCGCCTGAGCCCAGGCTGCGATGGAGTCCACCCGGTTGGCCGGATCCTCGCT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...................................................................................................ATGAGCCCAGGCTGCGAG.............................. 18 1 1.00 0.00 0.00 1.00 0.00 0.00
9	chr3L:6154156-6154306 -	50.92	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTC--------------CATGACGCTCTGGACCCTGCCTTGCT GTTCTCCCATTCGCGATCGGCGACATGGGCGTAGACTCCGGATGGCGAGGCGTGGGTCACTCGGGTGGTGGTCACCAGGCCAGCTGCCTTGCCCGCATCCATGGCCCATTTGCCCAAGGAGAAGACATGGTTTGATTCATCGGCCATCGCC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ......................................CGTGTGGCGAGGCGTGG................................................................................................ 17 1 1.00 0.00 0.00 0.00 1.00 0.00 .....................................CCGGGTGGCGAGGAGTGG................................................................................................ 18 1 1.00 0.00 1.00 0.00 0.00 0.00 .....................................TCGGTTGGCGAGGCGTGG................................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 0.00 ........................................GATGGCGAGGTGTGGATC............................................................................................. 18 1 1.00 0.00 0.00 1.00 0.00 0.00
2	chr2R:17841680-17841830 +	50.92	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCTCTGCCACATTCGATTGGCCGTCTTGGCATATGCTCCCGATGGACTGGCGTGGGTCAGTGTGGTGGTGGTCACAATGCCCGTGGACTTGCCGGCATTCTGGGACCATTCCGCAATGGAGGTCAGGCGGTTCGCGGGATCCTGGCTGGCG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...................................CTCCCGTTGGACTGCCGT.................................................................................................. 18 2 0.50 0.00 0.00 0.00 0.50 0.00 ....................................................TGGCTCACTGTGGTGGTG................................................................................. 18 1 1.00 0.00 0.00 0.00 1.00 0.00 .....................................................................................................................GGAGGTCxGGGGGTTCGC................ 17 1 1.00 0.00 0.00 0.00 1.00 0.00
11	chr3R:9370864-9371019 -	50.48	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG-------------------CTCTGGACCCTGCCTTGCT GTTCTCCCAGTTCCGGTTGGCCAGGTGGGCGTACACGCCAGCTGGCGAGGCATGTGTTACGGAGGTGGTGGTGACCAGTCCCGTGGCCATTCCCTGCTTCTGCGCCCAGGCCGCAATGGAGGACACATGGTGGGCGTCTAGTGACTGCGCCTGGCA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .......................................................GTTTTGGAGGTGGTGGT.................................................................................... 17 1 1.00 0.00 0.00 0.00 1.00 0.00

droEre2 - 10 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	scaffold_4820:1105506-1105642 +	91.35	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCACTCCCAATCCCGGTCGTAGATGTGGGCGTACGTGGCGGCAGGCGTGGCATGGGTGATCCTGGTTGTGGTGACCACTCCAGTACGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTTTGGACCCTGCCCTGCT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ........................................GCAGGCGTGGCATGGGCT............................................................................... 18 1 1.00 0.00 0.00 0.00 1.00
6	scaffold_4845:4868917-4869047 +	65.87	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT ACACTCCCATCGGCGATCTGGCACGTGGGCGTAGAGGGCAGCCGGAGTGGCATGCGTCACCCGGGTTGTGGTCACGAAACCCGTGCGCATGCCGTCCACCTGGGCCCATTTGAGGATCGTCTGGAC------GTGGT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................GTTGxGGGCAGCCGGAGTGGC...................................................................................... 20 1 1.00 0.00 0.00 0.00 1.00
9	scaffold_4929:8906148-8906292 +	60.36	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT-------- GTTCTCCCAATTGCGATCTGCGATGTGGGCATAAACGCCAGCCGGCGATGCGTGTGTCACCCTGGCTGTGGTGACCAGTCCCGCGTCCTTGCCAGCCGCCTGTGCCCACTGCGCGATGCTGAGCACCCTATCCTCCTCGTTTGCG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .................................AACGCCAGCAGGAGATGC.............................................................................................. 18 1 1.00 0.00 0.00 0.00 1.00
4	scaffold_4784:21093878-21094014 +	58.26	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCTCGAAATCGCGGTTCGAGGTGTGCGCATAAACTCCGGCCGGACTGGCGTGGGTAACCCGAGTGGTGGTCACCAATCCGGCGGATTTGCTACCCTTAAGCGCCCAGGCGGCGATGGAAGAGAGCCTATTCTGTG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ....................GGGTGTGCGCATGAACTC................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00
1	scaffold_4690:11556844-11556974 +	56.93	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCCTC--TCCCCGCCTACTTACATGGGCGTAGGCACCCGCCGGACTGGCGTCCGTCAGCCGGGTGGTGGTCACCACTCCCGTGGCCTTGCCGGCCCGCTGTGCCCACTGGAGTACGGAGTCCACCCGCT-----C Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
3	scaffold_4784:8273680-8273824 +	56.5	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGA--------CCCTGCCTTGCT GTGCTCCCAACTCCGCTCGGCAACGTGGGCATAAACTCCGGCTGGGGAAGCGTGTGTCACCCGGGCGGTGGTCACCACACCGGCCCACTTTCCGGCCTCCTGGGCCCACTGACCAATGCTCTGGACATGGGTACTCGAGTTGGTC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..........................................................................................................CGCTGAACAATGCTCTGG..................... 18 1 1.00 0.00 0.00 0.00 1.00
10	scaffold_4770:4823842-4823992 -	54.7	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGAC--------------CCTGCCTTGCT GTTTTCCCAGTCGCGTTCGGCGATATGGGCATACACTCCAGAGGGCGAGGCGTGAGTGACGCGGGTGGTGGTCACCAGACCCGCCCACTTGCCCGCCTCCATGGCCCACTTGGCTATGGAGTCGACGTGAGTGCTCTCGTCCAGCATGACC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..............................................................................................................................CTGAGTGCTCTxGTCCAGC...... 18 1 3.00 0.00 0.00 0.00 3.00 ...........CGCGTTCGGCGATATGGGC......................................................................................................................... 19 1 2.00 0.00 0.00 0.00 2.00 .......................................................................TCACCAGACCCACCCACTTTC........................................................... 21 1 1.00 1.00 0.00 0.00 0.00
2	scaffold_4770:16280291-16280438 +	53.62	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCT-----------------CTGGACCCTGCCTTGCT GTTCTCCCAGTTCCGGTTGGCCAGGTGGGCGTACACTCCAGCTGGCGAGGCATGTGTTACGGAGGTTGTGGTGACCAGTCCCGTGGCCATTCCCTGCTTCTGCGCCCAGGCCGCAATGGAGGACACATGGTGGGCGGCTTGTGCCTGC------ Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
8	scaffold_4845:12236833-12236983 +	51.51	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCACTCCCACATGCGATTGGCCGTCTTGGCATATGCTCCAGATGGACTGGCGTGGGTCAGGGTGGTGGTGGATACAATACCCGTGGACTTGCCGGCATTCTGGGCCCACTCGGCGATGGAGGTCAGACGGTTAGCCGGATCCTGGCTGGCG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ............................................................................................................................AGACGGTCAGxCGGATCCT........ 18 1 1.00 0.00 0.00 0.00 1.00 ....................................................TGGGTxGGGGTGGTGGTGG................................................................................ 18 4 0.25 0.00 0.00 0.00 0.25 ..................................GCTGCAGATGGAGTGGCGT.................................................................................................. 19 1 1.00 0.00 1.00 0.00 0.00
11	scaffold_4784:8275839-8275989 -	49.73	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTC--------------CATGACGCTCTGGACCCTGCCTTGCT GTTCTCCCATTCGCGATCGGCGACATGGGCATAGACTCCGGATGGCGAGGCGTGGGTCACTCGGGTGGTGGTCACCAGTCCAGCAGCTTTGCCCGCATCCATGGCCCATTTTCCCAGGGAGAAGACATGGTTCGATTCATCGGCCATCGCC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .............................................................................................................................CATGGTTCGGTTCAGCGG........ 18 1 1.00 0.00 0.00 0.00 1.00

droFic1 - 11 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453782:423025-423161 +	87.03	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCACTCCCAATCCCTGTCGTAGATGTGGGCGTAAGTGGCGGCGGGCGTGGCGTGGGTGATCCTGGTGGTGGTGACAATTCCGGTGCGCTTGCCCGCCTTCTGAGCCCACTCCATGATGCTTTCGACGCGACCTTGCT Size Hit Count Total Norm
3	scf7180000453858:1259200-1259336 +	66.89	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GTTCTCCCAGTTGCGGTCCGCCGTGTGGGCGAAGACGCCGGCCGGCGAGGCGTGGGTCACCCGGGCGGTGGTCACCAGGCCCGCGTCCTTGCCCGCCGCCTGCGCCCACTGGGCGATGCTCCACACGCGGTCCTCCT Size Hit Count Total Norm
14	scf7180000454038:733655-733784 -	59.29	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCCTCGCCGCGTCTTCGAACA--TGGGCATAGGCTCCCGCGGGACTGGCGTCCGTCAGCCGGGTGGTGGTCACCACACCGGTCGCCTTGCCCGCCCGTTGCGCCCACTGGATCACGGAGTCCACCC------GCT Size Hit Count Total Norm
4	scf7180000453929:569325-569461 +	56.82	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCTCGAAGTCGCGATTGGAGGTGTGAGCATAAACTCCGGCCGGACTGGCGTGGGTTACCCTTGTGGTGGTCACCAATCCAGCGGATTTCTTTTCCTTAATCGCCCAGGCGGCAATGGAGGAGAGTCTATTTTGTG Size Hit Count Total Norm
13	scf7180000454106:1863270-1863418 +	55.8	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCT-----------------GCCTTGCT GTTCTCCCAGTTCCGGTTGGCCAGGTGGGCGTACACCCCAGCTGGCGAGGCGTGGGTCACCGAGGTGGTGGTCACCAATCCGGTGGCCATTCCCTTTTTCTGCGCCCAGGCC-----GCAATGGAGGCCACATGGTGAGCGGACTGCGCCTGCG Size Hit Count Total Norm
12	scf7180000454096:98970-99120 +	54.11	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACT---------------------------------CCATGACGCTCTGGACCCTGCCTTGCT GTTCTCCCAGTCGCGTTCCGCGATGTGGGCGTAAACCCCCGACGGCGATGCGTGGGTAACCCGAGTGGTGGTCACCAGACCCGCCCACTTGCCCGCCTCCATGGCCCACTTGGCTATCGAGTCGACGTGGGTGCTCTCGTCCAGCATGACG------------------- Size Hit Count Total Norm
7	scf7180000454066:1977489-1977635 +	53.73	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTC---CATGACGCTC-------TGGACCCTGCCTTGCT GCTCTCGAAGAATCGATTGGTGGTTTTGGCATAGGCTCCCGATGGACTGGCGTGGGTCAAAGTAGTGGTGGTCACGAATCCGGTCGCTTTACCTGCATTCTGGGCCCACTCGGCAATGGAGGTCAGTCGGTTGGCCGGATCCTCGCT Size Hit Count Total Norm
5	scf7180000454003:170973-171123 +	53.29	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT-------------- ACACTCCCAGCGGCGATCGGCGACATGGGCATAAAGCGCCGCCGGAGTGGCATGAGTTACCCGGGTTGTGGTCACAAAGCCTGTTCTCATTCCGTCCAGCTGAGCCCATCTGAGAATCGTCTGGACATGGTGATCCTTCTGCAAGGATGCG Size Hit Count Total Norm
10	scf7180000454066:1986560-1986710 +	51.51	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCATTCCCACATTCGATTGGCTGTTTTGGCATAGGCTCCCGAAGGACTCGCGTGGGTCAAAGTGGTGGTGGTTACAATGCCGGTGGATTTGCCGGCATTCTGAGCCCACTCAGCGATGGATGTTAGGCGGTTAGCTGGATCTTGGCTGGCG Size Hit Count Total Norm
9	scf7180000454066:1983793-1983943 +	50.92	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCATTCCCACATTCGATTGGCTGTTTTGGCATAGGCTCCCGAAGGACTCGCGTGGGTCAAAGTGGTGGTGGTCACAATGCCAGTGGATTTGCCGGCATTCTGAGCCCACTCGGCGATGGAGGTTAGGCGGTTAGCTGGATCTTGGCTGGCG Size Hit Count Total Norm
2	scf7180000453841:140696-140846 +	47.96	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTC--------------CATGACGCTCTGGACCCTGCCTTGCT GTTCTCCCATTCACGATCCGCGACATGGGCGTAGACGCCAGATGGAGAGGCGTGGGTCACTCGAGTGGTGGTTACCAGTCCGGCGGCTTTTCCCGCATCCATGGCCCATTTTCCCAGGGAGAAAACATGGTTCGTTTCGTTGGCCATGGCC Size Hit Count Total Norm

droEug1 - 11 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409166:158947-159083 +	85.59	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT GCACTCCCAATCTCTGTCGTAGATGTGGGCGTAGGTGGCGGCAGGCGTTGCATGGGTGATCCTGGTGGTGGTGACAATACCAGTGCGCTTGCCCTCCTTTTGGGCCCACTCCATCACGCTTTGAACCCTGCCCTGTT Size Hit Count Total Norm
10	scf7180000409533:635979-636105 -	55.18	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT --ACTCCTCGCCTCGCCTTCGGACATGGGCATAGGCTCCGGCAGGACTGGCATCCGTCAATCGGGTGGTGGTCACTATGCCCGTGACCTTGCCCGCTTGCTGTGCCCACTGCAGTACCGAGTCCACCC--------- Size Hit Count Total Norm
8	scf7180000409463:1742833-1742983 -	53.29	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT-------------- ACATTCCCAACGACGATCCGGAACATGGGCATAGAGGGCAGCTGGGGTGGCATGAGTTACCCGTGTTGTGGTCACAAAACCCGTTCGCATGCCGTCTTCTTGAGCCCACTTAAGGATTGTCTGAACATGGTGATCCTCCTGCAATGAGGCG Size Hit Count Total Norm
7	scf7180000409672:5990322-5990472 +	53.29	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT GCACTCCCACATACGATTGGCTGTCTTGGCATATGCTCCCGAGGGACTGGCGTGGGTCAGAGTGGTGGTAGTCACAATACCGGTGGATTTTCCGGCGTTCTGGGCCCACTCAGCGATGGAGGTTAGACGGTTCGCTGGATCCTGGCTAGCT Size Hit Count Total Norm
3	scf7180000409209:714731-714875 +	53.29	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTGCT-------- GTTCTCCCAATTACGATCAGCGATATGGGCATAAACGCCAGCTGGTGAAGCATGGGTCACCCTGGCTGTGGTCACAAATCCTGCATCCTTGCCCGCCGCTTGTGCCCATTGGGCTATGCTAAGCACACGATCCTCCTCATTGGCG Size Hit Count Total Norm
6	scf7180000409672:5986517-5986667 +	52.1	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACG--------------CTCTGGACCCTGCCTTGCT ACTCTGCCACATTCGATTGGCTGTCTTGGCATATGCTCCCGAGGGACTGGCGTGGGTCAGAGTGGTGGTGGTCACAATACCGGTGGATTTTCCGGCGTTCTGGGCCCACTCAGCGATGGAGGTTAGACGGTTCGCTGGATCCTGGCTAGCT Size Hit Count Total Norm
1	scf7180000407136:372670-372817 +	51.95	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGAC-----------CCTGCCTTGCT ATTCTCCCAGTTCCTGTTGGCAAGGTGGGCGTACACTCCAGCTGGTGAAGCATGGGTGACCGATGTAGTAGTGACCAAGCCCGTTGCCATGCCCTGTTTTTGCGCCCAGGCCGCAATGGAGGATACATGATGAGCGGATTGCGCCTGT Size Hit Count Total Norm
4	scf7180000409466:3352585-3352729 +	50.08	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCT--------GCCTTGCT GTGCTCCCATTCCCTCTCCGCCACATGAGCATAAACACCAGCTGGAGAAGCATGTGTCACTCTGGCGGTGGTCACAATACCTGCCCACTTGCCGGCGTCCTGGGCCCATTTACCAATGCTTTCGACATGATTACTAGAATTTGTG Size Hit Count Total Norm
5	scf7180000409672:5983400-5983546 +	49.98	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACTCCATGACGCTCTGGACCCTGCCTTG---------------CT GCTCTCAAAGAATCGGTTGGTGGTCTTGGCATAAGCGCCCGACGGACTGGCATGGGTCAGCGTGGTGGTGGTAACGATTCCAGTGGACTTTCCGGCAGCCTGGGCCCAAGCA-----GCAATGGAGTCTACCTGGTTGGTGGGATCTTCACT Size Hit Count Total Norm
9	scf7180000409466:3354807-3354957 -	45.59	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCCACT--------------CCATGACGCTCTGGACCCTGCCTTGCT ATTCTCCCATTCACGATCGGCCACATGGGCATAAACTCCAGACGGGGAAGCGTGAGTCACTCGGGTTGTGGTCACCAGTCCAGCAGCTTTGCCTGCATCCATGGCCCACTTTCCCAAGGAGAATACATGGTTCGTTTCGTTAGCCATGGCC Size Hit Count Total Norm
11	scf7180000409711:4590812-4590967 -	44.09	GCACTCCCAGTCCCGGTCGTAGATGTGGGCGTAGGTGGCGGCGGGCGTGGCGTGCGTGATCCTGGTTGTGGTGACCACGCCGGTGCGCTTGCCCTCCTTCTGGGCCC----------------------ACTCCATGACGCTCTGGACCCTGCCTTGCT GCTCTCAAAGTCACGGTTCGATGTGTGGGCATAAACCCCAGCTGGACTAGCATGGGTCACTCGCGTTGTGGTCACTAATCCGGCAGATTTTCTTCCTTTGAGCGCCCAGGCGGCGATGGAGGAAAGTCGATTCTGTGGCAACCGGGA---TGCCTTGCA Size Hit Count Total Norm