Possible Orthologs for dme-mir-4947

droSim1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
6 chr3R:24520998-24521128 - 93.21
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCCACCCATTCGCCGCCCGCCCACTTTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGGGGGCGGAGCACGGAATTCGGGGGCGTGGCGCTCTGGGTAGCGGGTA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
7 chrX:11317794-11317808 - 6.98
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
--------------------------------------------------------------------------------------------------------------------ACTGAATAATCGGAA
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
None None


droSec1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
72 super_4:3696490-3696620 - 93.96
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCCACCCATTCGCCGCCCGCCCACTTTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGGGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
............................................................................................................CGTGGCGCAATTGGTAGC.....181134.005.004.00125.00
.............................................................................................................GTGGCGCAGTTGGTAGCG....18146.000.009.0037.00
............................................................................................................CGTGGCGCAATTGGTAGCG....19138.000.000.0038.00
.............................................................................................................GTGGCGCAATTGGTAGCG....18117.000.001.0016.00
.............................................................................................................GTGGCGCAATGGATAGCG....18115.000.001.0014.00
.............................................................................................................GTGGCGCAATGGGTAACG....1819.000.000.009.00
.............................................................................................................GTGGCGCACTGGATAACG....1814.000.000.004.00
.............................................................................................................GTGGCGCAATCGGTAGCG....1813.001.000.002.00
............................................................................................................CGTGGCGCAGTTGGTAGC.....1813.000.001.002.00
............................................................................................................CGTGGCGCATTGGTTAGCG....1912.000.000.002.00
............................................................................................................CGTGGCGCATTGGTTAGC.....1812.000.001.001.00
............................................................................................................CGTGGCGCAGTCGGTAGC.....1811.000.001.000.00
.........................................................................CAGGATTTAAGGGGGCGGAGCA....................................2211.000.001.000.00
.............................................................................................................GTGGCGCAGTGGGTGGCG....1811.000.000.001.00
............................................................................................................CGTGGCGCACxAGGTAGCG....1811.000.000.001.00
...........................................................................................................GCGTGGCGTACTCGGTAGCG....2011.001.000.000.00
.............................................................................................................GTGGCGCACTGGATACCG....1811.000.000.001.00
...........................................................................................................CCGTGGCGCACTTGGTAGC.....1911.001.000.000.00
.............................................................................................................GTGGCGCACTTGGTAGCG....1811.000.000.001.00
............................................................................................................CGTGGCGCACxCGGTAGCG....1811.000.000.001.00
............................................................................................................TGTGGCGCAATGGGTAGCG....1911.000.000.001.00
.............................................................................................................GTGGCGTACTCGGTAGCG....1811.000.000.001.00
73 super_8:378564-378680 - 36.53
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATT---------------------------------TATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TTGATTAATT--------------------TTCGCATTACGTTTATTGTTAATATACTCGTACAAGTGTGTACTATATCTTGTATCTTTCAG--TTTGTTTCTTCGAAGAATTTCAGTGAGG--TTTATAGAA-------GCGTT----------------TTT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.................................................TAATATACTCGTACAAGC.................................................................................................1811.000.001.000.00
4 super_4:4095070-4095121 + 23.03
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCA------CGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
---------------------------------------------------------------------------------AAGTGGGCGGGTCAGTGCTATCGTATCCCGGAGAGGGGCG----TGGCAGTGGGAA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
................................................................................................................AxAGGGCAG----TGGCAGTGGG..1811.000.001.000.00
.........................................................................................................ATTCCGGAGAGGGGCC----TG..........1811.000.000.001.00
5 super_15:1926215-1926230 + 6.98
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
-------------------------------------------------------------------------------------------------------------------CACTCGATAATTCGTT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
None None
78 super_32:111651-111665 - 6.98
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
--------------------------------------------------------------------------------------------------------------------ACTGAATAATCGGAA
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
None None


droYak2 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
7 chr3R:21664594-21664723 + 90.14
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCT-TCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCGGCCCAC--CCCTCGCCGCCCACTTTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCACAGTGGGTAGTGGGTA
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...............................................................................................................TGGCAGAGTGGGTAGTGGGG.2021.500.000.000.001.500.00
...........................................................................................................GGCGTAGCACAGTxGGTAGT.....1920.500.000.000.000.500.00
...................................................................................................AATTCxGGGGCGTGGCA................1620.500.000.000.000.500.00
...............................................................................................................TGGCAGTGTGGGTAGTGGGT.2020.500.000.000.000.500.00
...............................................................................................................TGGCACAGCCGGTAGTGGG..1920.500.000.000.000.500.00
..........................CCCAC--CCCGGGCCGCCC.......................................................................................1720.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGTGGGT.2020.500.000.000.000.500.00
...............................................................................................................TGGCACTGTGGGTAGTGGGTT2120.500.000.000.000.500.00
..................................................................................................CAATTCxGGGGCGTGGCA................1730.330.000.000.000.330.00
...............................................................................................................TGGCAGTGTGGGTAGTGGG..1920.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGTTGGT.2020.500.000.000.000.500.00
...............................................................................................................TGGCACCGTGGGTAGTTGGT.2020.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGTGGGTT2120.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGCGGG..1920.500.000.000.000.500.00
8 chr3R:21664597-21664730 + 46.01
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCT-TCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA-------
---AGTAATAATATGAAAGCGACCGGCCCAC--CCCTCGCCGCCCACTTTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCACAGTGGGTAGTGGGTAGTGTGCA
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
...............................................................................................................TGGCAGAGTGGGTAGTGGGG........2021.500.000.000.001.500.00
..........................CCCAC--CCCGGGCCGCCC..............................................................................................1720.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGTGGGTTG......2211.000.000.000.001.000.00
...............................................................................................................TGGCACCGTGGGTAGTTGGT........2020.500.000.000.000.500.00
...............................................................................................................TGGCACAGTGGGTTGTGGGTTG......2211.000.000.000.001.000.00
...........................................................................................................GGCGTAGCACAGTxGGTAGT............1920.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGCGGG.........1920.500.000.000.000.500.00
...................................................................................................AATTCxGGGGCGTGGCA.......................1620.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGTTGGT........2020.500.000.000.000.500.00
...............................................................................................................TGGCACAGCCGGTAGTGGG.........1920.500.000.000.000.500.00
...............................................................................................................TGGCACTGTGGGTAGTGGGTT.......2120.500.000.000.000.500.00
...............................................................................................................TGGCAGTGTGGGTAGTGGG.........1920.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGTGGGTT.......2120.500.000.000.000.500.00
...............................................................................................................TGGCAGAGTGGGTAGTGGGT........2020.500.000.000.000.500.00
..................................................................................................CAATTCxGGGGCGTGGCA.......................1730.330.000.000.000.330.00
...............................................................................................................TGGCAGTGTGGGTAGTGGGT........2020.500.000.000.000.500.00


droEre2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
6 scaffold_4820:3199292-3199428 + 80.51
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACT-------GGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCGGCCCAC-CCCTTTCCGCCCACTTTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGGGGGCGTAGCACGGAATTCGGGGGCGTGGCACAGTGGCTAGTGGATAGTGGGTA
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head


droFic1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scf7180000454073:3512300-3512430 + 70.24
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTT-----AAGTGGGC---GGAG----CACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCGGCCC--TCCGACTCCGCCTCCTTTTATCCTTCGTCTACTGTTTCATCGCAGGACCCTGGAAAAGGGGCCGGGGGAGGGGTCAAGGAATTCGGGGGCGTGGCG----------TGGGTA
SizeHit CountTotal Norm
2 scf7180000454050:278792-278895 + 41.09
TAAA-GTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGC-GTGGCGC---------------ACTGGGTAGCGGGTA
ATTTATTATTAATTCTA--------------------------------------------CTACATTTAGTCGCATAGCCCTGCGGGGCGGGGCAGGGATTTCGTTTGGTTCGGAGATCCGTGCCCCTCTCCGCCGGATTTCGATCA
SizeHit CountTotal Norm


droEug1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
9 scf7180000409787:744124-744277 + 51.59
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCC---GCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGT------------------------------GGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCGGCCCAGCCCCTCTCTACGCCCCCTTTTTATCCTTCGTCTACTGTTTCATCGCAGCACTCAGGGGTGATAGGATAGGGGTTAGGGGTGAGGCTGGGGCGGTCCAAGGAATTCGGGGGCGTGGCGTT----------GGTA
SizeHit CountTotal Norm


droBia1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
51 scf7180000302075:1908428-1908558 + 68.93
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTT---------AAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCAA-CCAGCCCTCCGCCACCGCCCCCTCTTTATCCTTCGTCTAGTGTTTCATCGCAGGACTTTGGGTTTGTGCGCGGCGGGACCGAGGAATTCGGGGGCGTGGC--------TGGTTGGTA
SizeHit CountTotal Norm
144 scf7180000302428:7201846-7201936 - 26.36
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTT---ATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTG--GGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------CCACCTTTTTGGCCGTCTGATCCCATCTGGGTTCTTTTGTTTGCATGTCAATCCCATGCTTATAGAGAGG------------------------GCGGCTCTGGCTTGTATGTT
SizeHit CountTotal Norm
1 scf7180000301397:21456-21475 + 10.34
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
T--------------------------------------------------------------------------------------------------------------GGCGCCTTGGGTTTCC-GCA
SizeHit CountTotal Norm
None


droTak1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
5 scf7180000415700:411921-412062 - 55.07
TAAAGTAATAATATGAAAGCGACCCA--CCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAG---------------------------TGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCCTGGACCGCCCCCTTTCC--------TTATCCTTCGTCTACTGTTTCATCGCAGGACTTTTGGGACGTAGGATAAGGGAGGCGAAGGCGGGGGCAGGACAAGGAATTCGGGGGCGTGGCGTT----------GGTA
SizeHit CountTotal Norm


droEle1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
21 scf7180000491261:1411208-1411334 - 72.05
TAAAGTAATAATATGAAAGCGACCCAC-CCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTT-------AAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCG--GGTA
TAAAGTAATAATATGAAAGCGACCAGCCCCATACCGCCTCCAACCGATTTTATCCTTCGTCTACTGTTTC-----AGGACTTTTGGGATCAGGGGGCGGGCCAAGGAATTCGGGGGCGTGGC---------AGCGTTGGTA
SizeHit CountTotal Norm
23 scf7180000491278:1928241-1928359 - 42.37
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGG--------AGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CAAAATTGTAAG--GACCCGCATTTATACATGATTTTTCCACAAATGTTTATGTTGCA---ATTGTACGATTGTAAAAACTAAGTCAGTGGCCGTGCGCAATACACCATATGT-----------AT---G-TACATGTA
SizeHit CountTotal Norm
6 scf7180000491255:3498119-3498210 + 26.22
TAAAGTAA-----TAATATGAAAGCGACCCACCCATTCCCCTT-CCGCCCATATTTATCCTTCGTCTACTGTTTCAT-CGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CAACCCAGTCGAGAAATGAAAACTTAACCCAACCGATTCTTAACATTTTCAAACTCCTAAATCGATTATCGTTGAAAGTACA----------------------------------------------ATAACTTGTG
SizeHit CountTotal Norm
14 scf7180000490751:530501-530547 - 20.72
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGG---GTA
GTGGGTGGTGG----------------------------------------------------------------------------GTGGT-----------GTGTGAGTGGCTGAGTGGGTGGCAGCATGTT
SizeHit CountTotal Norm
10 scf7180000490214:1436847-1436884 - 15.5
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA----------
-------------------------------------------------------------------------------------------------------GGGGGCGGGGCGGGGTGGGCCGGAGGTTTGCTTTTTAA
SizeHit CountTotal Norm


droRho1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
10 scf7180000780007:218817-218951 + 62.4
TAAAGTAATAATATGAAAGCGACCCAC-CCATTCC-----------CCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTT-------AAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCACCCCCATCTCGCCGCCGACCCGCCTCCATCCGATTTTATCCTTCGTCTACTGTTTC-----AGGACTTTTGGGATCAGGGGGCGGGCCAAGGAACTCGGGGGCGTGGCGTT----------GGTA
SizeHit CountTotal Norm


droKik1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
37 scf7180000302276:805592-805716 - 63.39
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAG--TGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGGCCAGCACC-TCCTCCTCG-TCC---TTGTTCCTGGGTCCTCTGTTTCAGGGCAGGACTCCGTCTCTGGCTGAGGGGAAGATTCGGGGGCGTGGCGG---TGCTAGCTTCTA
SizeHit CountTotal Norm
35 scf7180000302270:257079-257241 - 34.26
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTA--CTGTTTCATCGCAGGATT----------------------------TAAGTGGGCGGAGCACGGAATTCGGGGG---CGTGGCGCACTGGGTAGCGGGTA
TAACCCAGACTTTTAAATAAAGCTCTCCCAT-CGCTTATAACCCATATTTCCCCTCAGTGTAGACTCGCTCATTGCATAATTAATGCTCTCTGTGTTTTAAATTTACATTTACAATGCCGTTACACGATGCTCACCGATGCTGATGCGCATTAAGTGGCGTATG
SizeHit CountTotal Norm
3 scf7180000302544:945996-946003 + 3.1
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
---------------------------------------------------------------------------------------------------------------------------ATCGAAGA
SizeHit CountTotal Norm
None None


droAna3 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
111 scaffold_13340:19733656-19733776 + 56.42
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTAC--------------TGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATAAAAGCGACCAGCCCCTACTTCTACTCCACCCAACCAGCCTCCCGATCCTGGGCAGCGTTGGTTGTTTCAGAGGCGGCTTGA--------------GGAACTCGGGGGCGTGCCGCTCC----------TA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.............................CTACTTCTTCTCCACCCATC................................................................................................2011.000.000.000.001.00
..............................................................CTGGGAAGCGTGGGTTG..................................................................1711.000.000.001.000.00
.................................................CATCCTCACGATCCTGGGC.............................................................................1911.001.000.000.000.00
...............AAAGTGACCAGCCCCTCC................................................................................................................1811.000.000.000.001.00
....................................................................................GAGGCGGCGTGC--------------GGAAC..............................1711.000.000.001.000.00
113 scaffold_13417:829559-829627 + 26.39
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TATAGTTTAATTATTTAAT--------------------------------------------------------TTATTACGATGGCCGAATTTCTGGACTCGGAGGCCGAG------GAATCTGAGGTA
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
...............................................................................................CGGCACTCGGAGGCCGAG------............1811.000.000.001.000.00
..........................................................................................AATTTCTGGACTCGGAGGCCGAG------G...........2411.001.000.000.000.00
..........................................................................................................GGCCGAA------GTATCTGAGGT.1811.000.001.000.000.00


droBip1 - 3 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
163 scf7180000396413:2657212-2657312 - 37.65
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATT--------TATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATAACAGCGGCCAGCCCCAGCTCCACCCATCCAGCCTCCCGATCCTGGCCAGCGCTTGCTGTTACAG----------------------------AGGCGGAGGCGTGGCGCTTC----------TA
SizeHit CountTotal Norm
98 scf7180000396615:15481-15495 + 7.75
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
--------------------------------------------------------------------------------------------------------------------ACGGGGAAGTAAGTA
SizeHit CountTotal Norm
None None
161 scf7180000395751:366253-366253 - 0.78
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------------------------------------------------------------------------------------------------------------------A
SizeHit CountTotal Norm
None None


dp4 - 4 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
31 chr3:722533-722667 - 49.16
TAAAGTAATAATATGAAAGCGACCCACCCATT--CCCCTTCCGCCCATATTTATCCTTCGTCTA-----CTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGAGATAATGACAAAGCAACCCATTAAAAGCCATCCCTTGACAACACTCCTCTCTCATCCCCTTCATATTCCCATCTCCGAA---AAATGAGCGAAGAACGGAGAGCAACGTTTTAATAAATTTGTAAACAGATT
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
2 chr2:13200189-13200291 + 40.81
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGT----CTACTGTTTCA---TCGCAGGATT------TAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCAGAGCTCCTCCCTCAAGCCCTTATTCATCCTCTATGCCACCAGTGTTTCAGGACCGTAGCGTTGGTGGCCAA-----------------------------------------GGGGGGA
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
30 Unknown_singleton_2483:277-313 + 16.28
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGG-GTAGCGGGTA
CGCAGCACTGGCATG-----------------------------------------------------------------------------------------------TGGCTCAAAGGATTAGCGTTCA
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
AGCAGCACTGGCGTG-----------------------------------------------------------------------------------------------TGG...................1811.001.000.000.000.00
None
37 chrXL_group1a:2920828-2920832 - 2.33
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GTGTG------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
None None


droPer1 - 5 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
86 super_26:1114277-1114391 - 42.87
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATT-TATCCTTCGTCTACTG-------------TTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GAC--------------GGTGGCCTTCCACTTCCTCTTCCGCCGCCACCACACCCCCTTCCCACTGCCAAGCACGCTCTTTTTATCGCAA--TTGTTGTCGGCGGAT--------------TTTCGGCTTACATGCGAGGAGCTA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
............................ACTTCCACTTGCGCCGCC...................................................................................................1811.000.001.000.000.000.00
72 super_0:7253259-7253361 - 40.81
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGT----CTACTGTTTCA---TCGCAGGATT------TAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCGACCAGAGCTCCTCCCTCAAGCCCTTATTCATCCTCTATGCCACCAGTGTTTCAGGACCGTAGCGTTGGTGGCCAA-----------------------------------------GGGGGGA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
...................CGAAAAGAGCTCCTCCCTC..........................................................................................................1913.000.000.000.000.003.00
82 super_20:380017-380073 - 23.11
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
T------------------------------------------------------------------TCTTCGAAGGAACAAAGGGAACGGGTTACGCGACT------GGTGCTGTAATGGG--GGGGTCG
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
41 super_24:285560-285602 + 19.38
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------------------------------------------------------------------------CAGGACACCGAATGGGTGGACAGTGGACATTGGATGGCGGACA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
..........................................................................................................CACAGTGGACATTGGACGGC.....2012.001.000.000.000.001.00
..................................................................................................AAACGGTGGACAGTGGACA..............1911.000.001.000.000.000.00
28 super_12:344905-344909 + 2.33
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GTGTG------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
None None


droWil1 - 15 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
100 scaffold_181096:10088805-10088934 + 41.75
TAAAGTAATAAT-ATGAAA----GCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAG------CACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CAAAATGTCCTTGATGACTGGCATTCACACACACACA-CACACACACACACATTTAAACACATCCATATGTACATCC---------ATGTATACATTTATCTAATACAGATGC--AGAGCTCGGAACTTCAAGTATAAGGCA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.................................CACA-CACACACACATACAGT........................................................................................20190.110.050.050.000.00
......................TTCCACACACACACA-CACACA..................................................................................................21320.030.000.030.000.00
...........................CACACACACA-CACACACACAC.............................................................................................21450.020.000.000.020.00
..............................ACACACA-CAAACACACACACCT.........................................................................................2280.130.000.130.000.00
..............................ACACAGA-CACACACACACACA..........................................................................................21510.020.000.000.020.00
...............................CACACA-CACACACACACAC...........................................................................................19640.020.000.020.000.00
............................ACACACACA-CACACGCACACTC...........................................................................................22510.020.000.020.000.00
.............................CACACACA-CACACACACACAC...........................................................................................21450.020.000.000.020.00
..............................ATACATA-CACACACACACACAT.........................................................................................22190.050.000.050.000.00
........................TCACACACGCGCA-CACACAC.................................................................................................2040.250.000.000.000.25
...............................CACACA-CACACACCCACACAGT........................................................................................2280.130.000.000.130.00
.............................CACACACA-CACACACACACACA..........................................................................................22400.030.000.030.000.00
.........................CACACACACACA-CACACACACA..............................................................................................22400.030.000.030.000.00
......................ATTCACACGCACACA-CACGCA..................................................................................................2111.000.000.001.000.00
.............................CACACACA-CTCACACATACACAT.........................................................................................2370.140.140.000.000.00
.............................CACACACT-CACACCCACACAC...........................................................................................21510.020.020.000.000.00
.....................CACTCACACACACACA-CACACATACACA............................................................................................28190.050.000.050.000.00
...................................CA-CACACACACACATAGT........................................................................................18420.020.000.020.000.00
..................................ACA-CAGACGCACACACAT.........................................................................................18220.050.000.050.000.00
.........................CACACACTCACA-CCCACACAC...............................................................................................21510.020.020.000.000.00
.........................CACACATACACA-CACACATACACACA..........................................................................................26250.040.000.040.000.00
........................TTACACCCACACA-CACACA..................................................................................................19240.040.000.040.000.00
......................ATGCACGCACACACA-CACACA..................................................................................................21150.070.000.070.000.00
.............................CACACACT-CACACCCACACACA..........................................................................................22450.020.000.000.020.00
.................................CACA-CACACACACACACATCTG......................................................................................2270.140.000.000.000.14
..........................ACACACACACA-CACGCACACTC.............................................................................................22510.020.000.020.000.00
............................ACACAGACA-CACACACACACA............................................................................................21510.020.000.000.020.00
..........................ACACACACACA-CACACACACACA............................................................................................23360.030.000.030.000.00
................................ACACA-CACACACACACATGT.........................................................................................20370.030.000.030.000.00
.....................TATGCACACACACACA-CACACA..................................................................................................22260.040.000.000.040.00
................................ACACA-CACACACACACACATTGT......................................................................................2360.170.170.000.000.00
.........................CACACACTCACA-CCCACACACA..............................................................................................22450.020.000.000.020.00
........................TTCCACACACACA-CACACACA................................................................................................21320.030.000.030.000.00
..................................ACA-CACACACACACACATGT.......................................................................................20370.030.000.030.000.00
.........................CACACACACACA-CACACACAC...............................................................................................21450.020.000.000.020.00
..........................ACACAGACACA-CACACACACA..............................................................................................21510.020.000.000.020.00
....................................A-CACACACACACACATTTGT.....................................................................................20130.080.000.080.000.00
.................................CACA-CACACACAGACACAGT........................................................................................20150.070.000.070.000.00
........................TCACACACACACA-TATACAC.................................................................................................20120.080.000.080.000.00
..........................AGACACACACA-CACACACAAACA............................................................................................23510.020.000.000.020.00
....................................A-CACACACACACACATTGT......................................................................................19140.070.000.070.000.00
..................................ACA-CACACATACACACATTTAAA....................................................................................2311.000.001.000.000.00
...........................CACACACTCA-CACCCACACAC.............................................................................................21510.020.020.000.000.00
...........................CACACACTCA-CACCCACACACA............................................................................................22450.020.000.000.020.00
............................ACAAGCACA-CACACACACACACA..........................................................................................23510.020.000.000.020.00
...............................CTCACA-CACACACAAACACAT.........................................................................................21100.100.000.100.000.00
..........................ACACACACACA-CAAACACACACACAGT........................................................................................2750.200.200.000.000.00
.................................CACA-CACACACACAGAGAT.........................................................................................19430.020.000.020.000.00
............................ACACACACA-CACACACACACACA..........................................................................................23360.030.000.030.000.00
........................................CACACACACACATCTATACACA................................................................................2230.330.000.330.000.00
.................................CACA-CACACACACACACATTGT......................................................................................2270.140.140.000.000.00
............................AGACACACA-CACACACACAAACA..........................................................................................23510.020.000.000.020.00
..........................ACAAGCACACA-CACACACACACA............................................................................................23510.020.000.000.020.00
...................................CA-CACACACACACACATTGT......................................................................................20110.090.090.000.000.00
................................ACACA-CACACACACACACAGT........................................................................................21100.100.000.100.000.00
...........................CACACACACA-CACACACACACA............................................................................................22400.030.000.030.000.00
488 scaffold_185730:260-410 + 35.64
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTA----------------------------AGTGGGCGGAGCACGGAATTCGGGGGCGTG-----GCGC----------ACTGGGTAGCGGGTA
-----------------------CCTCCTACTCCTTTCCCTTCCCTTTTTCCCCTTTTCATGTGGTCTCATCCCCAATCTTAATACTCATCAAGGTCTCCAGATCAAATAAATGGTCTGTAGACTGGATTCTGGGACTGAGAATTGTACCCCAGCCAGAGCTTCCTTACAGATG
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.........................................................................................................................................TGAGAACTGTACCCCAGCCAGAGCT............25137.000.0037.000.000.00
............................................................................................................................TGGACTCTGGGACTGAGAATTGTACCC.......................27123.000.0023.000.000.00
............................................................................................................................TGGACTCTGGGACTGAGAATTGTACCCC......................28112.000.0012.000.000.00
.........................................................................................................................................TGAGAATTGTACCCCAGCCAGAGCT............2516.000.006.000.000.00
............................................................................................................................TGGACTCTGGGACTGAGAATTGTAC.........................2516.000.006.000.000.00
.............................................................................................................................GGACTCTGGGACTGAGAATTGTACCC.......................2616.000.006.000.000.00
...............................................................................................................ATGTTCTGTAGACTGGACTCTGGGA......................................2516.000.005.000.001.00
..........................................................................................................................................GAGAATTGTACCCCAGCCAGAGCT............2416.000.006.000.000.00
..................................................................................ATACTCTTCAAGGTCTCCAGATCAAA..................................................................2615.000.005.000.000.00
..........................................................................................................................................GAGAATTGTACCCCAGCCAGAGCTTCCT........2815.000.005.000.000.00
..........................................................................................................................................GAGAACTGTACCCCAGCCAGAGCT............2415.000.005.000.000.00
.............................................................................................................................................AATTGTACCCCAGCCAGAGCTTCCT........2514.000.004.000.000.00
..........................................................................................................................................GAGAATTGTACCCCAGCCAGAGCTTCC.........2714.003.001.000.000.00
............................................................................................................................TGGACTCTGGGACTGAGAATTGTGCCCC......................2813.000.003.000.000.00
.........................................................................................................................................TGAGAATTGTACCCCAGCCAGAGC.............2413.000.003.000.000.00
.........................................................................................................................................TGAGAATTGTGCCCCAGCCAGAGCT............2513.000.003.000.000.00
90 scaffold_181096:2462243-2462359 + 34.04
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTA---------------TCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
T-----------------------------TTCTTTTTCTCCTTTTAGTTGCTTCCTTGCTGGTTGCTTGTTGTTTACCTGCGTCGCCAATGATTTACGGCATTTGCACTCAGAGTGTATAGTCCGGGTCCGGTTAGTAGTG-GTA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.....................................................................GTTGTTTTCTTGCGTCGC...........................................................1812.000.000.000.002.00
...........................................TTTAGTTGCTTCCxTGGTGG...................................................................................1912.000.002.000.000.00
.....................................................................GTTGTTTTCTTGCGTCGCC..........................................................1912.001.000.000.001.00
..........................................TTTTAGTTGCTTCCTGGT......................................................................................1811.000.001.000.000.00
........................................................TTTGTGGTTGCTTGTTGT........................................................................1811.000.001.000.000.00
604 scaffold_181009:2749713-2749781 - 26.36
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACG--GAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
AGGGGTTA----------------------------------------------------------------ACAGGACCTGGGAGTACGGGGGGCGGGGGATATTCATATAAGACACACCAATTATCACCTA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
613 scaffold_181089:11057506-11057708 - 26.33
TAAAGTAATAATATGAAAGCGACC-----------------------------CACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCG--------------------------------------CAGGATTTAAGT----G------------GGCGGAGCACGGAAT------TCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAAGTAATAATATGAAAGCCACCACCTTCCACTCCTCACTTGCTAACCGATTCCCCCACATCCTCTCCG--CATAGTTCTTCTCCTTTC--------ATAGTACCAACCATCATCCGACATTGCCCAACTCTTTCAGAAAATGCTTCATGTATTTGGCTGCTGGCTAAGGCGGTCTGCTGGATGCTGCTCTGGAGGCGTGGCCTTTTGTATA-------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
............................................................................................................................................................................................CTCTGGAGGCTTGGACTT..............1814.000.004.000.000.00
...........................................................................................................................................................................CGGTCTTCTGGATGATGCTC.............................2011.001.000.000.000.00
.....................................................................................................................................................TGAATCTGGCTGCTGGCT.....................................................1811.000.000.000.001.00
...............................................................................................................................................GCTTCTTGTATTTGGCTGGT.........................................................2011.000.001.000.000.00
.........................................................................................................................................................................GGCxGTCTGCTGGATGATG................................1811.000.001.000.000.00
645 scaffold_181096:2113130-2113189 - 26.26
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
AAACGAAATAAAATAAAAATAA--AACCCACCCCCAACCCCCCGAAAAAAACCCATGGCCCA---------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.......ATAAAATAAAAATAG--AAGC.......................................................................................................1911.000.001.000.000.00
550 scaffold_180588:244480-244503 - 11.45
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GGCCG---------------------------------------------------------------------------TGAGTGGCTGGGGCAGGCA--------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
99 scaffold_181096:9220956-9220980 + 10.08
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGG---TA
-------------------------------------------------------------------------------------------------------------GTCTCGCGCAAAGTAGCTAAAGATT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
94 scaffold_181096:8385409-8385430 + 10.08
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TCCAGCTAAAAACAAAAAGCGA-------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
None
30 scaffold_180698:1218760-1218782 + 8.53
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAGCTCACCAAGCTTGG------------------------------------------------------------------------------------------------------------TCAGGA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
None
839 scaffold_181150:3323897-3323913 - 6.2
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GCATCAAATAATATGTA------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
None
610 scaffold_181089:10905088-10905098 - 4.65
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GGTGTGGAGGA------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
None None
666 scaffold_181132:297522-297531 - 4.65
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
-------------------------------------------------------------------------------------------------------------------------GTCGAGGACA
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
None None
95 scaffold_181096:8386705-8386714 + 3.88
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GCAAAGGTCA-------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
None None
774 scaffold_181150:578737-578740 - 3.1
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GGTA-------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
None None


droVir3 - 16 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
335 scaffold_13049:15807-15938 + 43.51
TAAAGTAATAATATGAAAGCGACCCACC------CATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TA-TGTGGCAGTAGAAATTTCTCCCATAAATATATGTACCCTTTCCGTCTTTATGTTTGTTTGGTTGAATGGATCGAACTACAAATCTAGAGATTAGAAATTGGAAATCCGTATTCTAGTA----ATGTATCCAGAA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..................................................................GAATGGATCGAACGACTA.....................................................1812.000.000.000.002.000.00
708 scaffold_12970:5741900-5742050 - 40.17
TAAAGT--AATAATATGAAAGCGACCCACCCATTCCCCTTC--CGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTT------AAGTGGGCGGAGCAC-------GGAATTCGGGGGC------GTGGCGCACTGGGTAGCGGGTA
CAAAGTCCAGGAATATCTACACAGACAATCTGTTCCCTCTTGGTGTTTACATCTTGTTGTTATTCTAGGCTGCCGCACAGCATTTTTGATTAAGCCGGCAAACGCCGGGTAATACCAGCTGG---TATAATCGCTCCTCCTTTGGGCGAGGTTA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..................................................ATCTTGTTGTTAGTGTAGGC....................................................................................2011.000.000.000.000.001.00
262 scaffold_12970:7369518-7369637 + 38.47
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TTGGGCCCTGGGACTCTGGCCTTTCGCTCACTCTTCTC-TTCCGCTTCCTCCTCTTCATCTAGCTTCTGTCCATCTAATTTACGT----------CTGTCTTTTGAAGCGTGCAGTGATAGTTTTTTTTTG
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
648 scaffold_12963:6847241-6847355 - 36.75
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CGGCCTAATTGTG----AGCGGCATCTCCATACTCTGGTGTGCCATATCGGCCTCGAAACTATT----CGCCACGGCATTCTCCA---TGGACCATCAA-----CAGCTGCTGATTGCCTATCCGTGTGCG
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..................................................................................................A-----CAGCTGCTGATTGCCTATCCGT.....2311.000.001.000.000.000.00
770 scaffold_13047:18267580-18267775 - 27.4
TAAAGTAATAATATGAAAGCGACC--------------------------------------------------CACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTA--------------AGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCG------GGTA----
TAAAGTAATAATATGAAAGCGCCAAAGCAGCACAAGACCAAGCCAAGCCCCCGTCCCAAGCACCCAACCCCAACCCCCAATTCCCACTCCCAACACAG-----CAGCTACCAATGTTTCAATACATGTCT-AGCTTGAGGCAGCACAGTGGGGTGGGCTGCCTTTAAGGAGGCGTGGCA--GT-TGTAGTTCTCACAAGTAATCC
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
....GTAAAAATATGAAAGCGG.......................................................................................................................................................................................1811.000.000.000.000.001.00
.........................AGCTGCAGAAGACCAAGC..................................................................................................................................................................1830.330.000.000.330.000.00
....GTAAAAATATGAAAGCGT.......................................................................................................................................................................................1811.000.000.000.000.001.00
243 scaffold_12970:2248243-2248331 + 25.61
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTG-----TTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TTTACATGTTTATTAGAACTGTTT-----------------------------------CCACTGTCACATTTATTTATAAGATTTAGTTATG------------TTTTTGCCCATCGTCCATTGTTTAGTTAGTT
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
627 scaffold_12932:1355252-1355342 - 23.69
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TTATCAGATATTTCGT-------ATATATATTACTATTTTGTTCGATTTTGTGCCTTGTCATC---TTCATCTATATATTTGATTCTTCTATGTGTATAAT------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
............................................................................TTTTTGATTCTTCGATGT.....................................18110.002.000.000.002.006.00
............................................................................TATTTGAxTCATCTATGTGTAT.................................2111.000.001.000.000.000.00
.............................................................................TTTTGATTCTTCTATGTC....................................1811.000.000.001.000.000.00
...................................ATTTTGTTCGCGTTTGTG..............................................................................1811.000.000.000.000.001.00
711 scaffold_12970:7439059-7439114 - 22.09
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCG-CACTGGGTAGCGGGTA
----------------------------------------------------------------------------GACTCGAAAGAGCAGTACTTGGAGACCAGGGGCAGGACAACTCAATTAAGCATGCA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
12 scaffold_10324:738177-738259 + 19.15
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAA--------------CATTTTCCACTTAATTTCCCACTTATTAAAATCACATTTGTTGCACTTTTTTGTTGT----------------------------------TATGATGAACACATTAGCTTATC
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
...................................................CATTTGTGGCACTTTGTTG.............................................................1911.000.000.001.000.000.00
597 scaffold_12855:7797192-7797227 - 16.28
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
---------------------------------------------------------------------------GAATTCAAGTGGGCTCTGCAGTTA--------------------GCTTAGCTAGTA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
.........................................................................................TCTGAAGTTA--------------------GTTTAGCT....1811.000.000.001.000.000.00
601 scaffold_12875:7960692-7960721 - 12.0
TAAAG--TAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TGCAGGGTAGCAGC----------------------------------------------------------------CGCTTCGGTAAGC---------------------------------------GCA
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
340 scaffold_13049:2828203-2828223 + 9.3
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
T--------------------------------------------------------------------------------------------------------------TGCGCATTGTGTAATAGCCG
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
None
659 scaffold_12970:1409990-1410008 - 7.75
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------------------------------------------------------------------------------------------------GCACACACTATAGTATGTG
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
None
334 scaffold_13047:16901631-16901635 + 3.1
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAATG------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
None None
845 scaffold_13300:6029-6032 - 1.55
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GTTG-------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
None None
349 scaffold_13049:15473236-15473236 + 0.78
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------------------------------------------------------------------------------------------------------------------A
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
None None


droMoj3 - 19 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
353 scaffold_6500:17797597-17797712 + 37.07
TAAAGTAATAATATGAAAGCG-ACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CAC---------------ACACACACACACAGACTTTGGCTACAAAATGTTAACTTGAGTTTGAAATTTTCCAG-GGAATATGAGTGAGAGGCGAGCGAAAGCAGTGAACAGAGTGAACAATGTATAAAGTA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.......................................................................................................................AATGTATAATGTA1920.500.500.000.000.00
.AC---------------ACACACACACACAGACGTA...............................................................................................21330.030.030.000.000.00
..................................................................................GAGTxAGCGGCGAGCGAAA...............................1811.001.000.000.000.00
383 scaffold_6540:13460511-13460696 + 34.68
TAAAGTAATAATATGAAAGCGAC-----CCA---CCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTA-------------------------------------------------A---GTGGGCGGA-GCACGGAATTCGGGGGCGTGGCGCACTGGGTA------GCGGGTA
TAAAGTAATAATATGAAAGCGCCATGTCCCAAACCCCATTCCCATTCC---CATACCCAAA----ACCCAC--TTACAGCGCAGCAGCTACTAGTGTTTCACTACATATATGTATGTATATGTATATAGATATATGTCTAGCTGGAGGCGGCTGCATTGAAGCAGGAGGCGTGGCAT---TTGTAGTTCTCACAAGTA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...........................................................................................................................ATATAGATATGTGTCTAT.........................................................18340.060.000.060.000.00
......................................................................................................................TATGTATATAGGTATATGTA............................................................20310.030.030.000.000.00
......................................................................................................................TATATATATAGATATGTGTCT...........................................................21420.020.020.000.000.00
133 scaffold_6473:4534309-4534412 + 32.29
TAAAGTAATAATATGAAAG-CGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGG----GGCGTGGCGCACTGGGTAGCGGGTA
AAACC----GCAGCTAACGCCGCCCTCTCCGT---------GCCCGT----CTCCTCTATCCACTCCAATATTGTTTTGTTTC-----TTTGGGCCCGGCACTCGGATAAGTTCATTTAGCACTG-----------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
....................................................................GTTTTGTTTTGTTTC-----TTTG............................................1940.250.000.000.000.25
413 scaffold_6680:15530160-15530261 + 29.94
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGC--------------------AG-------GATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
AG-TATAACAGCTCCAG----------------------CGATCAGACCTAC-CTTAGCCAGCTGTTCTGCTATGCAGCAGCCGTTACTACTGCAGATAACAGCAG----------------TAAA-----------------ATTCAATTACAAGTG
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
469 scaffold_6308:2751309-2751370 - 28.68
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGC-ACGGAATTCG---GGGGCGTGGCGCACTGGGTAGCGGGTA
CAA------------------------------------------------------------------------GGA-TCGAGTGGGCGCAGACGGGGGATATGGGCGGGGAGTGGGGAGTGGGGTAAGAGGGA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...................................................................................................................GGGGAGTGGGGTTAGAGGG.1913.000.003.000.000.00
...................................................................................................................GGGCAGTGGGGTTAGAGGG.1912.000.001.001.000.00
............................................................................................................CTGGAGTGGGGAGTGGGG.........1811.001.000.000.000.00
......................................................................................................ATGGGxTGGGAGTGGGGAG..............1811.001.000.000.000.00
....................................................................................................................GGGTGGGGGGTAAGAGGGA1911.001.000.000.000.00
...................................................................................................................GGGGAGTGGGGTTCGAGGG.1911.000.000.001.000.00
...................................................................................................................GGGGAGGGGGGTGAGAGGG.1911.000.000.001.000.00
...................................................................................................................GGGGAGTGGGGTTAGAGTG.1911.000.001.000.000.00
...................................................................................................................GGGGAGTGGGGTTAGCGGG.1911.000.000.001.000.00
..............................................................................................................GGAGTGGGGAGCGGGGA........1711.000.001.000.000.00
...................................................................................................................GGGGTGTGGGGTTAGAGGG.1911.000.000.001.000.00
...................................................................................................................GGGGAGTGGGGTTAGTGGG.1911.000.001.000.000.00
406 scaffold_6680:10773683-10773773 + 28.0
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCC--ATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TATATATATAATATATACAATAT---------------ATGTATATATATTTA---TTTGCATTTTGTATA----AATCATTTAAGCGGCCGCAAAACAAAATCA--------------------AGTTGAAA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
389 scaffold_6540:22231956-22232010 + 20.96
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GAAAGT------------------------------------------------------------------------TTAAAACAAGCGAA---CGGA-AACGGAAGTGGGCTGTACGTGATGCTTGTTG
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.....................................................................................AAGCGAA---CGGC-AACGGGAG.......................1911.001.000.000.000.00
149 scaffold_6473:12449315-12449353 + 14.73
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
AAATGCGCGTGCGAGCGAGTGAGCCAACCATTTTGCGTC--------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
.AATGCGCGAGCGACCGAG................................................................................................................1811.000.001.000.000.00
........GAGCGAGCGAGTGAGCCAC........................................................................................................1911.000.001.000.000.00
639 scaffold_6540:10228550-10228574 - 12.4
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------------------------------------------------------------------------------------------GACGGGCTACACTGAGCAGCGGTTG
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None
471 scaffold_6308:2754158-2754184 - 11.63
TAAAGTAAT----AATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
AACAGATTTTCGGCATATTGAAGCGAC------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None
548 scaffold_6473:13566416-13566437 - 10.85
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGC---GGGTA
----------------------------------------------------------------------------------------------------------------GCGCACTGAAAGGCGTTGAGTA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None
650 scaffold_6540:20847124-20847145 - 10.08
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CATAGAGAGAGAAAGAAAGAGA-------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
CACAGAAAGAGAAAGAAA.................................................................................................................1840.250.250.000.000.00
None
17 scaffold_6473:1757840-1757850 + 6.2
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
------------------------------------------------------------------------------------------------------------------------GGGAGTGGGTC
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None None
262 scaffold_6500:5380680-5380694 + 5.43
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
--------------------------------------------------------------------------------------------------------------------ATTTGTTAGCAATCC
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None None
641 scaffold_6540:13930396-13930404 - 4.65
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAA--------------------------------------------------------------------------------------------------------------------------CGGACA
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
................................................................................................................................ACA25330.030.030.000.000.00
None None
449 scaffold_6308:206378-206381 - 2.33
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GGAA-------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None None
386 scaffold_6540:18564981-18564982 + 1.55
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TA---------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None None
233 scaffold_6482:1501504-1501506 + 1.55
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GTT--------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None None
394 scaffold_6654:131552-131552 + 0.78
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------------------------------------------------------------------------------------------------------------------A
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
None None


droGri2 - 26 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
111 scaffold_14853:8203259-8203387 + 47.83
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCC----TTCGTCTACTGTTTCA------------------TCGCAG------GATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CAAATTAACAACAAGAATTCTTTCCAGCTCCCTCTCTCTCTCTCTCTCTCTCTCTAACTCCGTCTCTCATTTCCGAGAGAGAGCTAGTTACATTGCTGAGAGAGAAGTGAAGAGAGCCGAG------------------------------CTTTGTTA
SizeHit CountTotal NormV109
Male body
764 scaffold_14853:481974-482096 - 47.67
TAAAGTAATAATATG--AAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAATTGAAGATTTCTTATTGCGA--CATTCTAACATTTATCGTCTACAATTTTGC--TGTCTATGTGTGT---G-TGTGTGTGTGTGTGTGCAGCACTGCATGCGTGTGTGTG-TGTGTTTGGGTGTGGGT-
SizeHit CountTotal NormV109
Male body
....................................................................TGT---G-TGTGTGTGCGTGCGTGC........................................21320.130.13
..............................................................CATGTGCGT---G-TGTGTGTGTGTG.............................................22440.050.05
...................................................................GTGT---G-TGTGTGTGCGTGTGCGC........................................22260.040.04
..............................................................TATGTGTGT---G-TGTGTGTGTG...............................................20320.030.03
.......................................................................................................GTGTGTGTGTG-TGTGTTTTGG........21250.040.04
...............................................................ATGTGTGT---G-TTTGTGTATGTG.............................................21500.020.02
.....................................................................GT---G-TGTGTGTTTGTGTGTGCC.......................................21290.030.03
....................................................................TGT---G-CGTGTGTGTGTGTATGCA.......................................22100.100.10
..............................................................TATGTGTGA---G-TGTGTGTGTG...............................................20370.030.03
...................................................................GTGT---G-TGTGTGTGCGTGTGCGCA.......................................2370.140.14
...............................................................ATGTGTAT---G-TGTATGTGTGTGTG...........................................23490.020.02
....................................................................TGT---G-TGTGTGTGCGTGTGCGC........................................21350.030.03
....................................................................TGT---G-TGTGTGTTTGTGTGTGCC.......................................22280.040.04
....................................................................TGT---G-TGTGTGTGTGTGCATGC........................................21510.020.02
.................................................................GTGTGT---G-TGTGTGTGCGTGTGCGC........................................24170.060.06
.................................................................GTGTGT---G-TGTGTGTGCGTGTGCGCA.......................................2550.200.20
...............................................................ATGTGTGT---G-TGTGTGTGTAAGTGT..........................................24370.030.03
.......................................................................................................GCGAGTGTGTG-TGTATTTGGGTGT.....2411.001.00
.....................................................................GT---G-AGTGTGTGTGTGTGAGCA.......................................21130.080.08
...................................................................................................GCATGCGTGTGTGAG-TGT...............18110.090.09
............................................................TCTATGTGTGT---G-TGTATGTGTGTGT............................................25390.030.03
............................................................TCTATGTGTGT---G-TGTGTGTGTG...............................................22450.020.02
...............................................................ATGTGCGT---G-TGCGTGTGTGT..............................................20510.020.02
..........................................................................................................TGTGTGTG-TGTGTTTGCGCGT.....21160.060.06
................................................................................................AGTGCGTGCGTGTGTGTG-TGTG..............2290.110.11
...................................................................................................GCGTGCGCGTGTGTG-TGTG..............19130.080.08
................................................................................................AGTGCGTGCGTGTGTGTG-TGT...............21130.080.08
..........................................................................G-TGTGTGTGTGTCTGTGC........................................18240.040.04
............................................................................................................TGTGTG-TGTGGGTGGGTGTGG...21120.080.08
...............................................................AAGTGTGT---G-CGTGTGTGTGTGTGT..........................................24290.030.03
...................................................................GTGT---G-TGTGTGTGTGCGTGTGC........................................22120.080.08
...............................................................ATGTGTGT---G-TGTGAGTGTGT..............................................20430.020.02
..................................................................TGTGT---G-CGTGTGTGTGTGTGTGAAG......................................2520.500.50
....................................................................TGT---G-TGTGTGTGCGTGCGTGCA.......................................22100.100.10
......................................................................T---G-TGTGTGTGTGTGTGCGAAG......................................21160.060.06
.....................................................................GT---G-TGTGTGTGCGTGCGTGC........................................20320.030.03
............................................................................................................TGTGTG-TGTGGGTGGGTGTGGG..2270.140.14
849 scaffold_15110:19593301-19593429 - 47.48
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTC-----CGCCCATATTTATCCTT-CGTCTACTGTTTCATCGC--AGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
CAATACAAAAAGCCGGAGGGGCCGAAACTATGTCCATGCTGACACGCCCACGTCCGCCTTTTTCGCCATTGATTTAACGCCCTTGCTTTGGGTGGGCGATACATAAAAGGCG--------GCACACC--ATTGCTGCAA
SizeHit CountTotal NormV109
Male body
989 scaffold_15245:16079283-16079410 - 46.17
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCG------------GAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TATGGATGAGAAGTCAACGCCAC----CAAGCACACCTCCTCCCACACCC-----ACGACAACGCCCTCGCC----CATCCAGGTGGACGCGGCGGCCAACGGGAAGCCGACATCAGGAGCGTTCATCACCA--AAACGGGCC
SizeHit CountTotal NormV109
Male body
775 scaffold_14853:10115848-10115977 - 44.39
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATC--CTTCGTCTACTGTTTCATCGCA---GGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGC--------------GCACTGGGTAGCGGGTA
GATAGTAATAGTTGT----------------TTACCTT----CCATATTTGGTAACTTTGGCTTTTATTTTTTGGTGACCGGAGTGGGCGTGGCCGAAAACGGTTTTAGACGATCTGCCTTCCAAATTTGGTAACTTTATCTGATAAGTT
SizeHit CountTotal NormV109
Male body
....................................................................................................................................................GT1850.200.20
517 scaffold_15203:3591064-3591178 + 43.22
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCG-CACTGGGTAGCGGGTA
AAAAATACTCATATACTTGTAA--AATCCAGTTCTATTGCGCTTAGA---AGTTTTCGCTTATTTTTTTTTTATT-----TA-------TATATCTGGAATTTTGTGGCATATCAGTTGTTGGCTTCTGGTA
SizeHit CountTotal NormV109
Male body
45 scaffold_14830:1341312-1341441 + 42.12
TAAAGT--AATAATA--TGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGG-CGCACTGGGTAGCGGGTA
CAAATTTCAAGAATTCCTTAAAGCTGC--GCTCAGCCCAATGCAT--TGTAGTTAATTTTCTTCTTTTTTT--TTTTTTTGAGCTAAACATTAGTTACATAAACTTTTGTATCGCTGCCGCAAGCACAAGCAGTCG
SizeHit CountTotal NormV109
Male body
193 scaffold_15074:6425135-6425297 + 41.95
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAG--------GATTT--------AAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGG-----------------------------TAGCGGGTA
TAAAGTAATAATATGAAAGCGCCAAAGCACCACAAGCCCAAACCCAATTCCAGCTTCTACCAATGTTTCAATATACCATGTCTAGCTTCAGGCGACACAGTAGGGGGAG------------GGGCG-GGCGTAGTGGGCTGTGGCATGGGCGTGGCATTTGTAGTTCTCACAAGTA
SizeHit CountTotal NormV109
Male body
251 scaffold_15106:44017-44161 + 36.07
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACT-----------------------GTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TTT-----TTTTATGTTCGCATTTGTCCCAGTTGCTTTCGGCCAACAAATATTTTGCATAAATTTGATGTTAAGTAATGCCGCAATATTGTCTATGCTAGTTGGTAGTTAGCCAAGA----AAATTAGAAATA-AGAATATACGCTCGAGCGAA
SizeHit CountTotal NormV109
Male body
115 scaffold_14906:1281166-1281319 + 34.73
TAAA-GTAATAATATGAAAGCGAC---CCACC-CATTCCCCTTCCGCCC---------------------------------------ATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGC---------ACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TAAGTGAAATATTATGTA--CAACTGTCGAGTTTGT-TTTCTTTTACTTTTTTGCGCTTTTTTCGCGTGTTTCTTTCGCTTTTTGTTGGTGTTTCTTC------T--TTTTTTTTCGTTGAAAATAAATGAA----GCCATTCGAGCG---CAATCAGAA---TTTCGCATTAAA---------
SizeHit CountTotal NormV109
Male body
88 scaffold_14853:1397861-1397945 + 34.44
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGC-----ACGGAATTCGGGG--------GCGTGGCGCACTGGGTAGCGGGTA
C--------------------------------------------------------GTTTACCGTTT---AGAACGGGCTACGGCGGCGGAGAGCGGCACGGGGTTCAGGGTGGGGACGGGGTGGGGCGATGATCGGGGGTCT
SizeHit CountTotal NormV109
Male body
938 scaffold_15203:7669609-7669689 - 34.11
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCC--TTCCGCCCATATTTATCC---TTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
TATAATTGTAATTGTATTACGAGTTATTGAAACCCATTTTTAGCTCAAATATATCTTGTTTTATTTATTTTTTTATGGCAG-------------------------------------------------------
SizeHit CountTotal NormV109
Male body
979 scaffold_15245:4086601-4086687 - 32.32
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTT----A---AGTGGGCGGAG-CACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
T---------------------------------------------ATTTATTTTTA-TTTTCTTTTTTTTTAAGAAATAACGCAAAATATTCAGCGAAAAATTGGAATTCATTAGTGTCAAGCGATGAATAA------
SizeHit CountTotal NormV109
Male body
............................................................................AATAATGCAAAAGATTCAG............................................1911.001.00
191 scaffold_15074:1503364-1503421 + 22.86
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGC---ACTGGGTAGCGGGTA
G---------------------------------------------------------------------------AAATTGAGTGGAAGTAGACCCAGACC-CAGAGCGCAACCCGTGACTAAGTGGCGAACG
SizeHit CountTotal NormV109
Male body
587 scaffold_15203:9612904-9612957 + 20.93
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA------
-----------------------------------------------------------------------------------GTGGCAGGGGGAGGGGGGTTGGGGGGTTGGTTGGTTGGCTTGTGTGTGTGATCT
SizeHit CountTotal NormV109
Male body
...............................................................................................................GGTTGGTTGGxTGGTGTGTGT.....2011.001.00
........................................................................................................GGTGGTTGGTTGGCTGGC...............1830.330.33
252 scaffold_15110:5482962-5483005 + 17.05
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
-------------------------------------------------------------------------------------GGGTTAAATATGCAACTTGGCCAAGTGGCAGATTAGGTGGGAAG--
SizeHit CountTotal NormV109
Male body
814 scaffold_15074:3685356-3685390 - 12.4
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GGAGT------------------------------------------------------------------------------------------------GTGAGAGAGAGAGAGAGGGGGAGTTGGTTG
SizeHit CountTotal NormV109
Male body
None
991 scaffold_15252:868527-868551 - 8.53
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
----------------------------------------------------------------------------------------------------------GGTCTGACATATTTTGTATTTATTT
SizeHit CountTotal NormV109
Male body
752 scaffold_14830:264685-264699 - 5.43
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
A--------------------------------------------------------------------------------------------------------------------TTGAGTTTTTAGAA
SizeHit CountTotal NormV109
Male body
None None
900 scaffold_15203:968274-968277 - 3.1
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GGTA-------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
None None
825 scaffold_15110:474994-474997 - 1.55
TAAAGTAATAATATGAAAGCGACCCACCCATTCCCCTTCCGCCCATATTTATCCTTCGTCTACTGTTTCATCGCAGGATTTAAGTGGGCGGAGCACGGAATTCGGGGGCGTGGCGCACTGGGTAGCGGGTA
GCTG-------------------------------------------------------------------------------------------------------------------------------
SizeHit CountTotal NormV109
Male body
None None


Generated: 04/20/2012 at 05:46:04 EDT