Possible Orthologs for dme-mir-4940

droSim1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	chr3L:8545595-8545743 +	74.65	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCA-----------------TTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCTGACTCAGACGGACTTATCGCAGCTTATCGATCGGGTGGCGGATATAGATCATAGCAAGCCCTATCGAATTGGTTATACCT--ATTAAAGCA-ACTAGGTTTGTTTCGGCCGCCCGATTTTACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...............................................................................................ACTAGTTTTGTTTCGGCT........................................ 18 1 2.00 0.00 2.00 0.00 0.00 ......................................TGGCGGATATAGATCATAGCAAGC........................................................................................... 24 1 2.00 0.00 2.00 0.00 0.00 ............GGACTTATCGCAGCTTATCGATC...................................................................................................................... 23 1 1.00 0.00 0.00 0.00 1.00 ......................................TGGCGGATATAGATCATAGC............................................................................................... 20 1 1.00 0.00 1.00 0.00 0.00 ............................................................................................CA-ACTAGGTTTGTTTCGGCCGCC..................................... 23 1 1.00 1.00 0.00 0.00 0.00 ............................................................................................TA-ACTAGTTTTGTTTCGGCC........................................ 20 1 1.00 0.00 1.00 0.00 0.00 ......................................................TAGCAAGCCCTATCGAATTG............................................................................... 20 1 1.00 0.00 0.00 0.00 1.00
13	chrU:8273059-8273126 +	32.84	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCG----GCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ------------------------------------------GGAATTTGACCCTTACTTGACCCTTAATTGACTAAAACCTTATTTATTTCGTTAGTCCGTCCGATTCT------------------------------ Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .....................................................................................TTATTTCGTTAGTCCGTCTGATTCT------------------------------ 25 1 29.00 0.00 0.00 1.00 28.00 .....................................................................................TTATTTCGTTAGTCCGTCCGATTCT------------------------------ 25 1 25.00 0.00 0.00 0.00 25.00 .....................................................................................TTATTTCGTTAGTCCGTCCGATT................................ 23 1 19.00 0.00 0.00 0.00 19.00 ..............................................................................ACCTTATTTATTTCGTTAGTCCGTC..................................... 25 1 11.00 0.00 0.00 3.00 8.00 .....................................................................................TTATTTCGTTAGTCCGTCTGATT................................ 23 1 10.00 0.00 0.00 0.00 10.00 .....................................................................................TTATTTCGTTAGTCCGTCCGATTC............................... 24 1 8.00 1.00 0.00 0.00 7.00 .....................................................................................TTATTTCATTAGTCCGTCCGATTCT------------------------------ 25 1 5.00 0.00 0.00 0.00 5.00 ......................................................................................TATTTCGTTAGTCCGTCCGATTCT------------------------------ 24 1 4.00 0.00 0.00 0.00 4.00 ..............................................................................ACCTTATTTATGTCGTTAGTCCGTC..................................... 25 1 3.00 0.00 0.00 0.00 3.00 ..............................................................................ACCTTATTTATTTCGTTAGTC......................................... 21 1 3.00 0.00 0.00 0.00 3.00 .....................................................................................TTATTTCGTTAGTCCGTCTGATTC............................... 24 1 3.00 1.00 0.00 0.00 2.00 .............................................ATTTGAxxCTTACTTGACCCT.......................................................................... 19 1 3.00 0.00 3.00 0.00 0.00 ................................................................................CTTATTTATTTCATTAGTCCGTCCGATT................................ 28 1 2.00 0.00 0.00 0.00 2.00 .....................................................................................TTATTTCGCTAGTCCGTCCGATTCT------------------------------ 25 1 2.00 0.00 0.00 0.00 2.00 ..............................................................................ACCTTATTTATTTCGTTAGTCCG....................................... 23 1 2.00 0.00 0.00 0.00 2.00 .................................................................................TTATTTATTTCGTTAGTCCGTCTGA.................................. 25 1 2.00 0.00 0.00 0.00 2.00 ......................................................................................TATTTCGTTAGTCCGTCTGATTCT------------------------------ 24 1 2.00 0.00 0.00 0.00 2.00 .....................................................................................TTATTTCGCTAGTCCGTCCGATT................................ 23 1 2.00 0.00 0.00 0.00 2.00 .................................................................................TTATTTATTTCGTTAGTCCGTCTGG.................................. 25 1 1.00 0.00 0.00 0.00 1.00 ..................................................................TACTTGACTAAAACCTTATTTATTTCGG.............................................. 28 1 1.00 0.00 0.00 0.00 1.00 ....................................................................................TTTATTTCATTAGTCCGTCCGATT................................ 24 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCGCTAGTCCGTCCGATTCC------------------------------ 25 1 1.00 0.00 0.00 0.00 1.00 ..............................................................................ACCTTATTTATTTCGTTAGTCCGTCCGA.................................. 28 1 1.00 0.00 0.00 1.00 0.00 ..........................................................................TAAAACCTTATTTATTTCGTTAGTCCG....................................... 27 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCGTTAGTCCGTCCGATTCG------------------------------ 25 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCTTTAGTCCGTCCGATTC............................... 24 1 1.00 0.00 0.00 0.00 1.00 .................................................................................TTGTTTATTTCGTTAGTCCGTCTGA.................................. 25 1 1.00 0.00 0.00 0.00 1.00 ......................................................................................TATTTCATTAGTCCGTCCGATTCT------------------------------ 24 1 1.00 0.00 0.00 0.00 1.00 .........................................................................................TTCGTTAGTCCGTCCGATTC............................... 20 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCGTTAGTCCGACCGATTC............................... 24 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCGTTAGTCCGTCTGA.................................. 21 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCGTTAGTCAGTCTGATTCT------------------------------ 25 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCATTAGTCCGTCCGATT................................ 23 1 1.00 0.00 0.00 0.00 1.00 ......................................................................................TATTTCAATAGTCCGTCCGATT................................ 22 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................TTATTTCGTTAGTCCGTCCGAT................................. 22 1 1.00 0.00 0.00 0.00 1.00 ......................................................................................TATTTCGTTAGTCCGTCCGATTCC------------------------------ 24 1 1.00 0.00 0.00 0.00 1.00 .....................................................................................ATATTTCGTTAGTCCGTC..................................... 18 1 1.00 0.00 0.00 0.00 1.00 .............................................................................AACCTTATTTATTTCGTTAGTC......................................... 22 1 1.00 0.00 1.00 0.00 0.00 ..............................................................................ACCTTATTTATTTCGTTAGTCCGTCC.................................... 26 1 1.00 0.00 0.00 0.00 1.00 ...........................................................TGACCCTTACTTGACTAAAACC........................................................... 22 1 1.00 0.00 0.00 0.00 1.00
7	chr3L:8545586-8545616 +	13.01	---------CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ATGATATAGCCTGACTCAGACGGACTTATCG------------------------------------------------------------------------------------------------------------------ Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo		None
8	chr3L:8545605-8545626 +	9.7	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ----------ACGGACTTATCGCAGCTTATCG-------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo

droSec1 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:1396669-1396817 +	72.89	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCAT-----------------TGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCTGACTCAGACGGACTTATCGCAGCTTATCGATCGGGTGGCGGATATAGATCATAGCAACCCCTATCGAATCGGTTATACCT--ATTAATGCA-ACTAGGTTTGTTTCGGCCGCCCGATTTAACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ............................................................CCCCTATCGAATCGGTTATACCT--.................................................................... 23 1 1.00 0.00 0.00 1.00
27	super_0:5526168-5526310 -	46.53	CCAGACTCAGACGGACT-TATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGA-------------------------------------ATAGCAGGATATAG TTAAATTCAAAAGGTTTTCAGAACGATTATTAGATAGTGTAATGGTTACAAATTCT------------------------------TCGTATCGGTTGCCTTG-GCTACATAAAAAAAAATGTTGAGCCAAAAGTATTTGCAGAGATAGATAAATAATTAAGAAAAGAACTTAA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .................................ATAGTGTAATGGTTAGCA........................................................................................................................... 18 1 20.00 0.00 7.00 13.00 ..............................TAGATAGTATAGTGGTTA.............................................................................................................................. 18 1 1.00 0.00 0.00 1.00 .....................................................................................................................................................ATAAAAAAGTAAGAAAAGA...... 19 1 1.00 0.00 0.00 1.00 ..............................TCGATAGTGTAGTGGTTA.............................................................................................................................. 18 1 1.00 0.00 0.00 1.00 ....................................................ATCT------------------------------TCCTATCGGTTGCC.......................................................................... 18 1 1.00 0.00 1.00 0.00 .................................ATAGTGTAATGGTTATCA........................................................................................................................... 18 1 1.00 0.00 0.00 1.00
53	super_75:141644-141797 -	43.23	CCAGACTCAGACGGACTTATCGCAACTTAT--CGATCGGGTGGCGGATATAGATCA-TTGGTTATCCCTTAAT-TAAAGCAAACAAGATTTGTTTCGGCCGCCCGA-----TTTTACATACAACGACACGAATAGCAGGATAT----------AG --AGACTAAGACCAGGTTCCTTCAATTTAAGATAACCGATAGCTGATTACAGATCAGTTAGTTTTCTTACGATCTAGAACCAGAAAGTTATATTTCCTCTGTTTGAAAATCTTTTATATTTAGCTATCAAAATTATAGTAATTATTTTAGATAAC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..................................................................................................................................AATTGGAGTAATTATTTT....... 18 2 1.00 0.00 1.00 0.00 .........................................................................................................AAGATCTTTAATATTTAG................................ 18 2 0.50 0.00 0.50 0.00 ..................................................................................................................................AATTACAGTAAATATTTT....... 18 4 0.25 0.00 0.25 0.00
2	super_0:1396660-1396690 +	13.01	---------CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ATGATATAGCCTGACTCAGACGGACTTATCG------------------------------------------------------------------------------------------------------------------ Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head		None
3	super_0:1396679-1396700 +	9.7	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ----------ACGGACTTATCGCAGCTTATCG-------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
20	chr3L:2783249-2783373 -	72.71	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCAGACTCAGACGGACT---AGCAACTTCGCGATCGGGTGGCGGCTGTAGAT-------TGTCCTTGTATCAAAGGAAAAGAGATTTCTTTTGGCCACCCGATTCAAAATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..........................CTCGCGATCGGGTGGT.............................................................................................. 16 1 1.00 0.00 0.00 0.00 1.00 0.00 .........................CTACxCGATCGGGTGGC.............................................................................................. 16 1 1.00 0.00 0.00 0.00 1.00 0.00 .......CAGACGGACT---AGCAACTTCGCGATC..................................................................................................... 25 1 1.00 0.00 0.00 1.00 0.00 0.00 .........................CTACGxGATCGGGTGGCGG............................................................................................ 18 1 1.00 0.00 1.00 0.00 0.00 0.00 ............................AGGGATCGGGTGGCGG............................................................................................ 16 2 0.50 0.00 0.00 0.00 0.50 0.00 ............................AGTGATCGGGTGGCGG............................................................................................ 16 3 0.33 0.00 0.00 0.00 0.33 0.00
32	chrX:16851377-16851405 -	13.71	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ----------------------------------------------------------------------------------------------------------ACATACATCCGTATGCATATCCGTATACA- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head

droEre2 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
23	scaffold_4784:4908876-4909031 -	57.62	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATA-----------------------------GATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCTGACTCAGACGGACTA---GCAACTTATCGATCGGGTGGCGGATATACCCGTGCACAGATTGTAGCACACCCTATCGA--ATTGGAATTCCCC--ATTAAAACTGAGTGGGCTTATATCGGCCGCCCGAT-TCACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ................TA---GCAACTTATCGATCGGGTGGC........................................................................................................................... 23 1 1.00 0.00 0.00 0.00 1.00 ...........................TATCGATCGGGTGGCGGAT....................................................................................................................... 19 1 1.00 0.00 0.00 0.00 1.00 ...................................................................................TTGGAATTxCCC--ATTAAAAGTG.......................................................... 21 1 1.00 1.00 0.00 0.00 0.00 .......................AACTTATCGATCGGGTGGCG.......................................................................................................................... 20 1 1.00 0.00 0.00 0.00 1.00
5	scaffold_4512:1172670-1172775 +	34.33	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCG----------------------ATTTTACATACAACGACACGAATAGCAGGATATAG C----------------------------------------------------ATTGGCTATACGTTTTTTCATCCAATTAAAACTAGTGGCATTGACCAGGTGGTTTAGGGGGTTTTAGTTTAATTTATTTCCGTAGATACAAGAAGCAAATTCATG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ......................................................................................................................................GTAGATACAAGATACAAAT..... 19 1 1.00 1.00 0.00 0.00 0.00 .......................................................................................GTGGCATTGACCAGGTGGTTTAGGG.............................................. 25 1 1.00 1.00 0.00 0.00 0.00
28	scaffold_4820:5800544-5800622 -	31.21	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG C----------------------------------------------------ATTCTTCAGGCCTTAATTAAG----ACAATTTTTACTACTTGGTGCATGTTACACATAC-ACTACATACATATATACATACAT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ....................................................................ATTAGG----ACAATTATTACT.............................................. 18 1 3.00 1.00 0.00 0.00 2.00
10	scaffold_4929:8267619-8267657 +	14.93	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG T-ACATACATATAGATATATAGCAATATA------------------------------------------------------------------------------CATACAAA-ACA----------------- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head
24	scaffold_4784:4909003-4909021 -	9.02	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ACGGACT-------------AGCAACTTATCG-------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head

droFic1 - 5 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
19	scf7180000454065:2533611-2533748 -	64.95	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATC--CCT--T-AA-TTAAAGCAAACA-AG--ATTTGTTTCGGC---CGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCAGACTCGGACGGACT---GGGAACTTATCGATCTTAT--CG---ATAACTTATCGGTTAACTTCGTTTTCAGCCCAAAGTAAATATAGTAGTTTATTTTGGCTACCACCCGATT-CACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm
28	scf7180000454169:19673-19813 -	47.85	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGC----GGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAG---CAGGATATAG ACT--CAGAAGCAGGCACTGTAATGCTTATAATTAAAAAGGCAAAAAATTACAAAATAAAAGTTATTTCTTAATTTTTACGAAAAAAATTGATTTTTAATACTTAAAATTAATTTTAATAATAAAAATTAGTAATAATTATTA Size Hit Count Total Norm
20	scf7180000454065:2533696-2533738 -	21.17	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ACGGACTGGG---AACTTATCG-ATCTTATCGATAACTTATCGGTTA----------------------------------------------------------------------------------------- Size Hit Count Total Norm
4	scf7180000454096:1457755-1457794 +	17.16	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ------------------------------------------------------------------------------------------------GTTCGATTTGGCATTCAATGAAATTAGATAGAAACTATAG Size Hit Count Total Norm
27	scf7180000454163:1926-1958 -	12.31	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG T------------------------------------------------------------------------------------------------------TTTATGTATGTATATACATTTAAAGGAATACA- Size Hit Count Total Norm

droEug1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
17	scf7180000409467:339436-339588 +	63.59	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGG------------------TTATCCCTTAATTAAAGCAAACAAGA-----TTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCAGACTCAGACGGACT---AGCAACTTATCGATCGGGTGGCGGAAATAGATTGTAGGAAGTTTTACTAATTGGACTTTTCCCTATAT--AAGTAAATAGAAAATAGTTTATTTTGGCTGCCCGATTTAACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm
38	scf7180000409109:171621-171757 -	44.65	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTG-GCGGATATAGATCATTGGT-TATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG TCACATATATATATATATATATAAATGTATGTGTTTAATGCGTGAAAATGTGCGCTTGGAGTACATTTCAATAAAATTAGGAGCACTTGGATTAACAGAGCGTGCGTTAAATGCTTTAATAAGACT-TAAGGATCTAA Size Hit Count Total Norm
13	scf7180000409110:44441-44566 +	39.95	CCAGAC--TCAGACGG-------------ACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTT-------GTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ACGGATATTTACACGGGCACAAATTATGTATTCTTCACAAC-CATCAATCAAACA-------------ATCAATCAACCAGTAATAAAAACA-ACAAAATCTAAAATTTGTTT-------------TTAATTATGA----GAAATTATCGACCTAAAG Size Hit Count Total Norm
44	scf7180000409458:44296-44321 -	12.69	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG --------------------------------------------------------------------------------------------------------------ACAAGGACACGGATTAAATGCTGGAG Size Hit Count Total Norm		None

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
17	scf7180000300910:2070791-2070920 -	68.72	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCA-------TTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATT-TTACATACAACGACACGAATAGCAGGATATAG CCGGACTCAGACGGACT-----------ATCGATCGGGTGGCGGAAATAGATTGTAGCCATTTGGATTTCCCCATAGAGAAGTGAATA--GTTTATTTTGGCTGCCCGATTCTCACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
11	scf7180000415356:50643-50795 -	60.85	CCAGACTCAGACGGACTTATCGCAACTTAT----CGATCGGGTGGCGGATATAGATCATTGGTTATCCC-TTAATTA------------------AAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCTGACTCAGACGGACTAGTCA---CTTATCGATCGATCGGGTGGCGGAAATAGATTGTAGAAAGCTCTATTAATTGAAAATCCAATCCCCATATAAGTAAATA--GTTTATTTTGGCTGCCCGATTCCACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm

droEle1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
39	scf7180000491193:3377542-3377694 +	61.14	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATC----------------ATTGGTTAT---CCCT-TAATTAAAGCAAACAAGAT---TTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCTGACACAGACGGACAA---GCAACTTATCGATCGGGTGGCGGCAATAGATTGTAGTAAGCTCTGTTAATTGGATATTGCCCCTATAAGTACA-TAAATATGATAGTTTATTTTGGCTGCCCGATTTTA-ATACAACGACAC-AATAGCAGAATATAG Size Hit Count Total Norm
65	scf7180000491008:650477-650507 -	12.69	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCA----GGATATAG TA-------------------------------------------------------------------------------------------------------------GATCGACTCTACTAGTGATGCTGATCAAG Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000777034:211800-211946 +	61.77	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATC----------------ATTGGTTA---TCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCTGACTCAGACGGACT---AGCAACTTATCGATCGGGTAGCGGAATTAGATTGTAGTAAGCTCTATTGATTGGATATTGTCGCATAAGTA-CGTAAATA--GTTCATTTTGGCTGCCCGATT-CACATACAACGACAC-AATAGCAGGATATAG Size Hit Count Total Norm

droKik1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
38	scf7180000302373:173620-173654 -	16.42	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG -----------------------------------------------------------------------------------------------------ATTTTAAAAAATATATAAGGCATAGTATGGTATAG Size Hit Count Total Norm
15	scf7180000302486:1643601-1643875 +	16.42	CCA-----------------------------------------------------------------------------------------------------------------------------------------------GACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATC-CCTTAATTAAAGCAAACAAGA----------TTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGG-------------ATATAG CCAAAACAAGATCGGTTGAACGTCTCCAGCTCCAAGTTTTTACATAGAGCAGGGGTGCCCATGAAGAACATTAGGAGCAGATCTCACAGAAGTCTCAAAGTTTCAGCCTTGAGTTGGGGATTTCGACTGTATAGCAGATAAAGCCTGACTCAGACGGACTAG------------AATCGGGCAGCGATAATAAAT-ATTGATAAATTCCACACCT-------------AGTCTATTCTATAGAGTC-GCTGCCCGGTGCCACATACAACGACAC-AATAGCAGGTCAAGATAAACCAATAGAG Size Hit Count Total Norm
20	scf7180000302639:880667-880677 +	4.48	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCAAGTCCAAA----------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm	None	None
12	scf7180000302334:307137-307140 +	1.49	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ACAA------------------------------------------------------------------------------------------------------------------------------------ Size Hit Count Total Norm	None	None

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
7	scaffold_13337:19535893-19536018 +	41.43	CC----AGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CACTGCGATCTCGAGTACTTTGATC-TCTCTTCTCAGGGCCCCAAAAAGTATGCTATGAAATATTTCGTTTGCTAAAGTGTTTCAAGGATTCTTTTGCGAGCCC-------------ACCTCAAGGATGTCAAACTCTAG Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ...........................................AAAAAGAATTCTATGAAAT.............................................................................. 19 1 1.00 0.00 0.00 0.00 1.00 .............................CTTTTCAGGGCCACAAAAA............................................................................................ 19 1 1.00 0.00 0.00 0.00 1.00 ......GATCTCGAGGACTTTGAGC-.................................................................................................................. 19 1 1.00 1.00 0.00 0.00 0.00 ..............................................................ATTTCGTTTGCTAAAGTGTTTCAATG.................................................... 26 1 1.00 0.00 0.00 0.00 1.00 ...............................................................TTTAATTTGCTAAAGTGT........................................................... 18 1 1.00 0.00 0.00 1.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
17	scf7180000396360:730594-730829 +	19.65	CCA--------------------------------------------------------------------------------------------------------------------------------------------------GACTCAGACGGACTTA-----TCGCAACTTA--TCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGAT--TTTACATACAACGACACGAATAGCAGGA-----TATAG AAAAACACTGCGATCTCGAGTACTTTGATCTCTCTTCTCAGGGCCCCAAAAAGTATGCTATGAAATGTTTCATTGCCAAAGTGTTTCAGAGGATCCTTTTGAGAGCCCAACTCACGGACGTCAAACTCTAGAGATGTCTCTTTTAAACCGACTCAGACGGACTTTGGTCTTTGCAGATAAGGCAGATCA--------------------------------------------------------GGCAG---GACTATATACATACAACGACAC-AATAGCAGGACTATCTATAG Size Hit Count Total Norm

dp4 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
56	chrXR_group5:393309-393508 -	31.33	CCAGACTCAGACGGACTT--AT--CGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCC------------------------------------------------------------------CGATTTTACATACAACGACACGAATAGCAGG-----------------------------ATATAG C-AGACTTAGACGGACTTCAATCTAGCAGTTTAACGATCGGGAAACGGGAATAAACCAAAG---------------------------------TCGGCAGCCTATCCATCAAAATTCCAATATAATCACAACAGAAATCCAATTTGTTGCTGGTTTATTTACGTTTCTCGAG-CCACATACAACGACACA-ACAGCAGGTCTTCAGATAACTCATATGAAATATACTTATGCGG Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ....................................AACGGGTAACGGGAATAA..................................................................................................................................................................................... 18 1 16.00 16.00 0.00 0.00 0.00 ...................AATCTAGCAGTTTAACGCTCGGGG................................................................................................................................................................................................ 24 1 1.00 0.00 1.00 0.00 0.00
39	chrXL_group1e:994781-994811 -	13.43	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACA-CGAATAGCAGGATATAG CAACACCATGA----------------------------------------------------------------------------------------------------------AACCATGTATCCAGATATAC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body		None

droPer1 - 8 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
41	super_9:3484001-3484112 -	39.16	CCAGACTCAGACGGACTTATCGCAACTTATC----GATCGGGTGGCGGATATAGAT--CATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG GCATACATAGGC------ATCGCATCCATCGGGGTCACCCGGTGGAGGATAAATTTTGCGGTGGTAACCCCGCAACACAAGCACTCA------------------------CACACACAGCGACCCAAACACGTGCAATAAC Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo
24	super_58:12638-12822 +	36.22	CCAGACTCAGACGGACTT--A--TCGCAACTTATCGATCGGGTGGCGGATATAGATCA---TTGGTTATCCCTTAATTAAAG-----------------C--AAACAAGATTTGTTTC-G----------GCCGCCCGATTTTACATACAACGACACGAATAGCAGG--------------ATATAG C-AGACTTAGACGGACTTCAATCTAGCAGTTTAACGATCGGGAAACGGGAATAAACCAAAGTCGGCAGCCTATCCATCAAAATTCCAATAGAATCACAACAGAAACCCAATTTGTTGCTGGTTTATTTACGTTTCTCGAG-CCACATACAACGACACA-ACAGCAGGTCTTCAGATAACTCATATGA Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ....................................AACGGGTAACGGGAATAA..................................................................................................................................... 18 1 4.00 4.00 0.00 0.00 0.00 0.00 ...GACTTAGACGGACTTCAATCTAGCAGT............................................................................................................................................................. 27 2 1.00 0.00 0.00 0.00 0.00 1.00 ........................................................................................................ATCCAATTTGTTGCTGTT................................................................. 18 1 2.00 0.00 0.00 0.00 0.00 2.00 .........................................................AAAGTCGGCAGCCTATCC................................................................................................................ 18 1 2.00 0.00 0.00 0.00 0.00 2.00 ...................AATCTGGCAGTGTAACGA...................................................................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 0.00 ...................AATCTAGCAGTGTAAGGA...................................................................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 0.00 ............................................................................TGAAAATTCCAATTGAAT............................................................................................. 18 1 1.00 0.00 0.00 0.00 1.00 0.00 .............................................................................................................................................................A-ACAGCAGGTCTTCAGATAACTC...... 23 1 1.00 0.00 0.00 0.00 0.00 1.00 .....................................................AACCAAAGTCGGCAGCCTAT.................................................................................................................. 20 1 1.00 0.00 1.00 0.00 0.00 0.00
62	super_42:453186-453247 -	24.63	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG GCACAC-CACACATATGTAT-------------------------------------------------------------------------ATTGCTCTTTTTTATGCAAATGCAAACAAACAACAATATATTG Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ...............................................................................................................AATGCAACCAAACAACAA....... 18 2 0.50 0.00 0.50 0.00 0.00 0.00
30	super_78:97705-97769 +	23.13	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAAT--------AGCAGGATATAG CAATATTTATATATGTTTGTCATC---------------TAC----------------------------------------------------------------ATATATAACGAAAATAATTCACTTTTCTCTGCATATGA Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ...TATTTATATATGTTTGTCATC---------------TAC----------------------------------------------------------------A..................................... 25 1 3.00 0.00 0.00 0.00 0.00 3.00
25	super_58:12632-12667 +	15.67	CCAG------ACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG CCAGATACAGACTTAGACGGACTT----CAATCTAGCAGT------------------------------------------------------------------------------------------------------ Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo .........GACTTAGACGGACTT----CAATCTAGCAGT------------------------------------------------------------------------------------------------------ 27 2 1.00 0.00 0.00 0.00 0.00 1.00
79	super_3591:1801-1806 -	3.73	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ATATAT---------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo	None	None
26	super_58:12648-12654 +	3.73	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ACGGACT--------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo	None	None
28	super_67:207867-207871 +	2.24	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG TCTAA----------------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo	None	None

droWil1 - 11 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
107	scaffold_181096:6035694-6035827 -	48.55	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTAC--ATACAACGACACGAATAGCAGGATATAG TCAGGCCTAAAATTAGTTGCCATAACTC-TCATTTATATAGTAGATTTGATGCTTTTTTGTTTTTTTAAT-ATATT--AAAATTTTTATTAATGCATTTCAGTGTAAAAATTAAAATGACACATTTTTCCTTACGTAA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ............................................................TTTCTTTATT-ATATT--AAA......................................................... 18 1 1.00 0.00 1.00 0.00 0.00 .........................................................TTGTTTATTTAAA-ATATT--A........................................................... 19 1 1.00 0.00 1.00 0.00 0.00 .........................................................TTGTTTATTTAAA-ATATT--............................................................ 18 1 1.00 0.00 1.00 0.00 0.00 ...........................................................................................ATGCAATTCAGTGTAAAACT........................... 20 1 1.00 0.00 1.00 0.00 0.00 .................................................ATTCTTTTTTGTTTTGTT....................................................................... 18 14 0.07 0.00 0.07 0.00 0.00 ............................................................TTTTTGTAAA-ATATT--AAAA........................................................ 19 1 1.00 0.00 1.00 0.00 0.00 .....................................................................T-ATATT--GAAATGTTTATT................................................ 18 4 0.25 0.00 0.25 0.00 0.00
96	scaffold_181024:1455219-1455345 -	48.13	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATT----AAAGCAAACAAGAT-TTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG A----CTTAAATAGATTCTTCG---------ACTCGAGTTTAAAATATAAATTTATTTTTCTCATTTGTGTATATATCATATAGAATAATTATTTGCAGTCTCTGGCACTTATAGCATATGAAAGATATATTAATATATA- Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head .......TAAATAGATTCTTCG---------ACT........................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 ......TTAAATTGTTTCTTCG---------AC............................................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 ...................................................................................GAATAATTATTTGCAGTCT....................................... 19 1 1.00 0.00 1.00 0.00 0.00 ......................................................ATTTTCCTCATTTGTGTCT.................................................................... 19 1 1.00 0.00 1.00 0.00 0.00
36	scaffold_181096:5946750-5946873 +	47.25	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACG---AATAGCAGGATA---TAG CCAAACTCATTGGCAC----CGCAAATCCGCTAC----TGGTGGTAATAGTTAATGTATTG---C------TAAGCAGATATGTTTTTTTTTTTCTTCACGGTTTGGCA-ACAGCAGCAGCAGCAGCAGCAAGAGAAACTAG Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head .................................................................................................................GTAGCAGCAGAAGCAGCAAG......... 20 5 0.60 0.60 0.00 0.00 0.00 ........................................................................................................TGCCA-ACAGCAGCAGCAGCAGGAGCA........... 26 1 2.00 0.00 2.00 0.00 0.00 ...................................................................................................................AGCAGCAGCAGCAGCAAGT........ 19 27 0.07 0.00 0.04 0.04 0.00 ...................................................................................................................AGCAGCAGCAGCAGAAAGC........ 19 19 0.11 0.00 0.00 0.11 0.00 .................................................................................................................ACAGCAGCAGCAGCAGCAAGA........ 21 51 0.04 0.00 0.04 0.00 0.00 ......................................................................................................................AGCAGCAGCAGAAAGAAA...... 18 7 0.29 0.00 0.29 0.00 0.00 .........................................................................................................GTCA-ACATCAGCAGCAGCA................. 19 47 0.02 0.00 0.02 0.00 0.00 .........................................................................................................................AGCAGCAGCATGAGAATC... 18 6 0.17 0.00 0.17 0.00 0.00 ...................................................................................................................AGCAGCAGCAGCAGCGAGAGG...... 21 9 0.11 0.00 0.11 0.00 0.00 ................................................................................................................AGTAGCAGCAGCAGCAGCAAGAGGA..... 25 2 0.50 0.00 0.50 0.00 0.00 .........................................................................................................GCCA-ACAGCAGCAGCAGCAGGAGCA........... 25 7 0.14 0.00 0.14 0.00 0.00 ........................................................................................................TAGCA-ACAGCAGCAGCAGCGGCAG............. 24 49 0.02 0.00 0.02 0.00 0.00 .........................................................................................................GGCA-ACAGCAGCAGCAGCGGA............... 21 14 0.07 0.00 0.07 0.00 0.00 .................................................................................................................GAAGCAGCAGCAGCAGGAAG......... 20 5 0.20 0.20 0.00 0.00 0.00 ............................................................................AGATGTGGTTTTTTTTTT................................................ 18 4 0.25 0.00 0.25 0.00 0.00 .........................................................................................................................AGCAACAGCAAGTGAAAC... 18 4 0.25 0.00 0.25 0.00 0.00 ..........................................................................................................GCA-ACAGCAGAAGCAGCAGCAGCA........... 24 35 0.03 0.03 0.00 0.00 0.00 .........................................................................................................GTCA-ACATCAGCAGCAGCAGCA.............. 22 30 0.03 0.00 0.03 0.00 0.00 .........................................................................................................................AGCAGCAGCAAGTGAACC... 18 4 0.25 0.00 0.00 0.25 0.00 ...........................................................................................................................ATGCAGCAAGAGAAACTAG 19 1 1.00 0.00 1.00 0.00 0.00 ............................................................................................TTCTTCTCGGTTTGGCA-A............................... 18 1 1.00 0.00 1.00 0.00 0.00 ...............................................................................................................CAACAGCAGCAGCAGCAGCAAGA........ 23 45 0.02 0.00 0.02 0.00 0.00 ........................................................................................................TGTCA-ACAACAGCAGCAGCAGCA.............. 23 9 0.11 0.00 0.11 0.00 0.00 ................................................................................................................AGCAGAAGCAGCAGCAGCCAGA........ 22 9 0.11 0.00 0.11 0.00 0.00 ................................................AGTTAATGTATTG---C------TAAGCAGATAT............................................................ 25 1 1.00 0.00 1.00 0.00 0.00 ...................................................................................................................AGCAGCAGCAGCAGGAAGA........ 19 229 0.00 0.00 0.00 0.00 0.00 ......................................................................................................................AGCAxCAGCAGAAAGAGAA..... 18 2 0.50 0.50 0.00 0.00 0.00 ......................................................................................................................AGCAGCAACAGCAAGTGA...... 18 12 0.08 0.00 0.08 0.00 0.00 ...........................................................................CAGAxATGTCTTTTTTTTT................................................ 18 1 1.00 0.00 1.00 0.00 0.00 ...................................................................................................................AGCAGCAGCAGCAGCAGGAGAG..... 22 30 0.03 0.00 0.00 0.03 0.00 .......................................................................................................TTGCCA-ACAGCAGCAGCAGCAGGAGC............ 26 1 1.00 0.00 1.00 0.00 0.00 ...................................................................................................................ATCAGCAGCAGCAGCAAGAGGA..... 22 6 0.17 0.00 0.17 0.00 0.00 ...............................................................................................................CAGCAGCAGCAGCAGCAGAAAGC........ 23 8 0.13 0.00 0.00 0.00 0.13 .........................................................................................................................AGCAACAGAAAGAGAAAC... 18 2 0.50 0.00 0.50 0.00 0.00 ....................................................................................................................GCAGCAGGAGCAGAAAGA........ 18 5 0.20 0.00 0.20 0.00 0.00 ..........................................................................................................GCA-ACAGCAGCAGCGGCAGCAGCA........... 24 39 0.03 0.03 0.00 0.00 0.00 ................................................................................................................ATTAGCAGCAGCAGCAGCAAG......... 21 19 0.05 0.00 0.05 0.00 0.00 .................................................................................................................GAAGCAGCAGCAGCAGGAAGAG....... 22 4 0.25 0.25 0.00 0.00 0.00 .......................................................................TAAGCAGATxTGTGTTTTTTTTTCTT............................................. 25 1 1.00 0.00 1.00 0.00 0.00 ........................................................................................................TGCCA-ACAGCAGCAGCAGCAGGAGC............ 25 1 1.00 0.00 1.00 0.00 0.00 .........................................................................................................GCCA-ACAGCAGxAGCAGCAGC............... 20 15 0.07 0.00 0.07 0.00 0.00 ...................................................................................................................AGCAGCAGAAGCAGCAAGC........ 19 16 0.06 0.00 0.06 0.00 0.00 ...................................................................................................................AGCAGCAGCAGCAGTACG......... 18 50 0.02 0.00 0.02 0.00 0.00 .....................................................................................................................CAGCAGCAGCAGCAAGAGGC..... 20 17 0.06 0.00 0.06 0.00 0.00 ..........................................................................................................GCA-ACAGCAGCAGCAGCAGCAGTCA.......... 25 22 0.05 0.00 0.05 0.00 0.00 .........................................................................................................GGCA-ACAGCAGCAGCAGA.................. 18 203 0.00 0.00 0.00 0.00 0.00 ...............................................TAGTTAATGTATTG---C------TAAGCAGATA............................................................. 25 1 1.00 0.00 0.00 1.00 0.00 ......................................................................................................TTAAGCA-ACAGCAGCAGCA.................... 19 30 0.03 0.00 0.03 0.00 0.00 .......................................................................................................TTGCCA-ACAGCAGCAGCAGCA................. 21 7 0.14 0.00 0.14 0.00 0.00 .........................................................................................................GTCA-AGAGCAGCAGCAGCA................. 19 26 0.04 0.00 0.04 0.00 0.00 ....................................................................................................................GCAGGAGCAGGAGCAAGA........ 18 5 0.20 0.00 0.20 0.00 0.00
75	scaffold_180702:1912604-1912729 -	46.31	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACAC-GAAT-AGCAGGATATAG T-AGATTAGAATGAACTTTTCGAAACATATTT-CCAAATTGCAACTAATAATCGAAGA----------GA-TGAGAAAGCAAATACTAATTGAACAGACTGTCTTTCAGCAATAAAACACTGAATCGACCGGATATAC Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ........AAAGGAACTTTTCGAAAC................................................................................................................ 18 1 1.00 0.00 1.00 0.00 0.00 ...............................................ATCATAGAAGA----------GA-TGAGAAAG........................................................... 21 1 1.00 0.00 1.00 0.00 0.00 ....................................................................................ACTAATTGAACAGACTGTCC.................................. 20 1 1.00 0.00 0.00 0.00 1.00
17	scaffold_180955:1205510-1205652 +	44.29	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCC---------GATTTTACATACAACGACACGAATAGCAGGATATAG TCATTCTTTCATTGACTTTTGGCATTGAAGCGAGCGTCAATCTTAAACCAAACAGCTGATTAATGTCAAATA--GAATATAAGAATAGGGCCAATCACCCATCCAACATTATTTCACATCAAATTGTACAAATATACATACATAT Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ...........................................CAAACCAAACAGCTGTTT.................................................................................... 18 1 6.00 0.00 6.00 0.00 0.00 ............................................AAACCAAACAGCTGTTTGA.................................................................................. 19 1 3.00 0.00 3.00 0.00 0.00 .....ATTTCGTTGACTTTTGGCA......................................................................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 .............................................................................................................................ATACACATATACATACATAT 20 48 0.02 0.00 0.02 0.00 0.00 .............................................AACCAAACAGCTGTTTGA.................................................................................. 18 1 1.00 0.00 1.00 0.00 0.00
97	scaffold_181024:1455845-1455996 -	41.65	CCAGACTCAGACGGACTTAT-----CGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGT-----TATCCCTTAATTAAAGCAAACAAGATTTGT------------TTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ACATATTCAATTACACTTACAGATCCACACAATATCTCTAGATATACATATATAGTAAATTGGTTTATATATTCCTTGACTCAGACGGACAAAGCAAATGGTAAACGAAAATTT----ATTAGCTTTAATTGGTAACGATAAAAAAAGATGAACAT-- Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ......................................................................................................AAACGAACATTT----ATGAGC.................................. 18 1 2.00 0.00 2.00 0.00 0.00 ........AATTACACTTAAAGAACC.................................................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 ...............................................................................................................................AATTGGTGATGATAAAAA............. 18 1 1.00 0.00 1.00 0.00 0.00 .............................................................................GACTCAGACGGACAAAGCA.............................................................. 19 1 1.00 1.00 0.00 0.00 0.00 ........................................................................................................ACGAAAAxTT----AATAGCTTT............................... 18 1 1.00 0.00 1.00 0.00 0.00 .........................................................AATTGGTTTATATATTTTTT................................................................................. 20 2 0.50 0.00 0.50 0.00 0.00 ..........................................TATACATATATAGxGAATTGGTTTATAT........................................................................................ 27 1 1.00 0.00 1.00 0.00 0.00 .....................................................................................................TAAACGAAAATTT----ATGAGC.................................. 19 1 1.00 1.00 0.00 0.00 0.00 .............................................................................GACTCAGACGGACAAAGCAAATGGTA....................................................... 26 1 1.00 0.00 1.00 0.00 0.00
12	scaffold_180772:2795338-2795483 +	40.38	CCAGACTCAGACGGACTTAT--CGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAG------------CAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG GCACAATCCAAAATAATCATCTAGGGAAATATCAGAAGAGAGGGGAACACAGATTATGATCCCTTGCTTTCTTAACCCTCCACCAACACTCCACACATGTTGTATGTACCTTTCCACTCTAACTATTGCT----AAATGCTATGGAGCCA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head .........AATATAATCATCTGGGGA........................................................................................................................... 18 1 6.00 0.00 6.00 0.00 0.00 .........................GAAATATCAGAAGAGAGGG.......................................................................................................... 19 1 2.00 2.00 0.00 0.00 0.00 ........................................................................TAACCCTCCACCAACACTCCACACATGT.................................................. 28 1 1.00 0.00 1.00 0.00 0.00 ............................................GAACACAGATTATGATCCCTTGC................................................................................... 23 1 1.00 0.00 1.00 0.00 0.00 .........................GAAATATCAGAAGAGAGGGGAA....................................................................................................... 22 1 1.00 0.00 1.00 0.00 0.00 ........CAATATAATCATCTGGGGA........................................................................................................................... 19 1 1.00 0.00 1.00 0.00 0.00 ............................................GAACACAGATTATGATCCCTTGCT.................................................................................. 24 1 1.00 0.00 1.00 0.00 0.00 .............TAATCATCTAGGGAAATA....................................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ......................................................................................................................CTAACTATTGCT----AAATGCTATGGAGCCA 28 1 1.00 0.00 1.00 0.00 0.00 ...........................AATATCAGAAGAGAGGGGAAC...................................................................................................... 21 1 1.00 0.00 1.00 0.00 0.00 ...............................................CACAGATTATGATCCCTTGCTTTCT.............................................................................. 25 1 1.00 0.00 1.00 0.00 0.00 ..............................................ACACAGATTATGATCCCT...................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 ..............................................................................................................TTTCCACTCTAACTATTGCT----................ 20 1 1.00 0.00 1.00 0.00 0.00 ..............AATCATCTAGGGAAATATCAG................................................................................................................... 21 1 1.00 1.00 0.00 0.00 0.00
27	scaffold_181074:337576-337716 +	39.5	CCAGACTCAGACGGACTTATCGCAAC-TTATCGATCGG--GTGGCG----GATATAGATCATTGGTTATCCCTT----------AATTAAAGCA-------------AACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG AAAAAATAAAATATAATTATTGCAAAATTTTCTATATTTATGTATGTATTTAGACAGACCATTAGTTCTAGTTTTCTGGCTTCTACTGTAGATATACATGAGTTACATGTTGGATTTTTTCTTGTAGC------------GCAATAAAATGA-------------G Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ...........................................................................................................TGTCAGATTTTTTCTTGTAGC------------GCAAT..................... 26 1 1.00 0.00 1.00 0.00 0.00 ...................................ATTTTTGTATGTATGTAG................................................................................................................. 18 5 0.20 0.00 0.20 0.00 0.00 ........................................................................TTTCGGGATTCTACTGTAGAT......................................................................... 21 1 1.00 0.00 1.00 0.00 0.00 ...................................ATGTATGTATGTATTTAGA................................................................................................................ 19 28 0.04 0.00 0.04 0.00 0.00 ....................................................................TAGTTTTCGGGATTCTACTGTAGATA........................................................................ 26 1 1.00 0.00 1.00 0.00 0.00 ....................................................................TAGTTTTCGGGATTCTACTGTAGA.......................................................................... 24 1 1.00 0.00 1.00 0.00 0.00 .................................................................................................ATGAGTTTGATGTTGGATTT................................................. 20 1 1.00 0.00 1.00 0.00 0.00 .......................................................................................................TACATGTTGGATTTTTTCTTGTAGC------------GC........................ 27 1 1.00 0.00 1.00 0.00 0.00 ..................................................................................................TGAGTTTGATGTTGGATT.................................................. 18 1 1.00 0.00 1.00 0.00 0.00
20	scaffold_181009:3352549-3352651 +	32.71	CCAGA-----CTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ACAGCAAACACTGAGAAGG--------CAACACAT-----TTTTAGCAAACAAACAACAGCGACAACAAC---AACAACAAGAACAAG----------------------AACAACCAACAACAACAACAACAAGATATAT Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head .....................................................................................................................AACAACATCAACAACCAGA..... 19 15 1.07 0.00 1.07 0.00 0.00 .......................................................TACGGCGACAACAAC---AACAAC.............................................................. 21 2 1.50 0.50 0.00 0.50 0.50 ....................................................................................................................CAACAACAACAACAACAAGT..... 20 38 0.08 0.00 0.08 0.00 0.00
10	scaffold_180708:9112325-9112403 +	27.21	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG ---------------------------------------------TACAGATATTTAGTTGTAAAGTAGTTAAACACCTCAAAACT------------AACAAGTTAAAAACCATGAAGCCAAGCGAAAGGAACAA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ............................................................GTAAAGTAGTTAAACACCTC........................................................ 20 1 1.00 0.00 1.00 0.00 0.00 .............................................TGCAGxTATTTAGTTGTAAA....................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 .....................................................TTTAGTTGTATTGTAGTT................................................................. 18 1 1.00 0.00 1.00 0.00 0.00 .................................................GATATTTAGTTGTAAAGT..................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 ...........................................................................ACCTCAAAACT------------AACAGCT............................... 18 1 1.00 0.00 0.00 1.00 0.00 .................................................................GTAGTTAAACACCTCAAAACT------------...................................... 21 1 1.00 0.00 1.00 0.00 0.00
111	scaffold_181096:10626896-10626952 -	22.69	CCAGACTCAGACGGACTTATCGCAACTTATCGATCGGGTGGCGGATATAGATCATTGGTTATCCCTTAATTAAAGCAAACAAGATTTGTTTCGGCCGCCCGATTTTACATACAACGACACGAATAGCAGGATATAG AAATA-----------------------------------------AGAGATCCTTGGTCAACAATCAA-------------------------------------ACACACACACACACACAGAGAGAGACACA- Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ............................................................................................................ACACACACACACATGGAGAGA....... 21 9 0.56 0.00 0.22 0.33 0.00 ..............................................................................................................ACACACACACACATGGAGAGA..... 21 9 0.56 0.00 0.22 0.33 0.00 ...............................................................AATCGA-------------------------------------TCACACACACACA................. 19 1 3.00 0.00 3.00 0.00 0.00 .................................................................................................................CACGCACACAGAGAAAGA..... 18 9 0.33 0.00 0.33 0.00 0.00