Possible Orthologs for dme-mir-33

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:19083102-19083230 +	96.16	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CTGAGTGCCACCAGACTCCTCCTCCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACACAACGCCGAATG Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ........................................GTGCATTGTAGTCGCATTGTC.................................................................... 21 1 692787.00 952.00 475699.00 167971.00 48165.00 ........................................GTGCATTGTAGTCGCATTGTCT................................................................... 22 1 13651.00 35.00 9362.00 4054.00 200.00 ........................................GTGCATTGTAGTCGCATTGT..................................................................... 20 1 6722.00 157.00 4422.00 1927.00 216.00 ........................................GTGCATTGTAGTCGCATTGTA.................................................................... 21 1 6210.00 25.00 4058.00 1761.00 366.00 ........................................GTGCATTGTGGTCGCATTGTC.................................................................... 21 1 6144.00 1.00 5395.00 711.00 37.00 ........................................GTGCATTGTAGTCGCATTG...................................................................... 19 1 5087.00 20.00 3330.00 1613.00 124.00 ........................................GTGCATTGTAGTCGCATTGTCA................................................................... 22 1 4853.00 411.00 2612.00 1160.00 670.00 ........................................GTGCATTGTAGTCGCATTGAC.................................................................... 21 1 3848.00 0.00 2768.00 812.00 268.00 ........................................TTGCATTGTAGTCGCATTGTC.................................................................... 21 1 2984.00 0.00 2163.00 541.00 280.00 ........................................GTGCATTGTAGTCGCATTGTT.................................................................... 21 1 2099.00 3.00 1399.00 670.00 27.00 ........................................GTGCATTGTAGTCGCATTGTCC................................................................... 22 1 1750.00 3.00 1298.00 412.00 37.00 ........................................GTGCATTGTAGTCGCATTGCC.................................................................... 21 1 982.00 1.00 628.00 271.00 82.00 ........................................GTGCATTGTAGTCGCATTGTCTG.................................................................. 23 1 886.00 23.00 479.00 317.00 67.00 ........................................CTGCATTGTAGTCGCATTGTC.................................................................... 21 1 819.00 1.00 591.00 134.00 93.00 ........................................GTTCATTGTAGTCGCATTGTC.................................................................... 21 1 808.00 0.00 577.00 170.00 61.00 ........................................GTGCATTGTAGTCTCATTGTC.................................................................... 21 1 800.00 0.00 625.00 120.00 55.00 ........................................GTGCATTGTAGCCGCATTGTC.................................................................... 21 1 678.00 5.00 460.00 175.00 38.00 ........................................GTGCATTGGAGTCGCATTGTC.................................................................... 21 1 652.00 2.00 478.00 133.00 39.00 ........................................GTGCATTGTAGTCGCATTGG..................................................................... 20 1 572.00 0.00 317.00 239.00 16.00 ........................................GCGCATTGTAGTCGCATTGTC.................................................................... 21 1 566.00 3.00 389.00 139.00 35.00 ........................................ATGCATTGTAGTCGCATTGTC.................................................................... 21 1 550.00 0.00 351.00 144.00 55.00 ........................................GTGCATTGTAGTCGCATTGTCG................................................................... 22 1 542.00 5.00 303.00 192.00 42.00 .........................................TGCATTGTAGTCGCATTGTC.................................................................... 20 1 521.00 0.00 390.00 92.00 39.00 ........................................GTGCATTGTAGTCGCATT....................................................................... 18 1 513.00 0.00 333.00 168.00 12.00 ........................................GTGCATTGTAGGCGCATTGTC.................................................................... 21 1 490.00 5.00 278.00 182.00 25.00 ........................................GGGCATTGTAGTCGCATTGTC.................................................................... 21 1 421.00 2.00 270.00 118.00 31.00 ........................................GTCCATTGTAGTCGCATTGTC.................................................................... 21 1 380.00 0.00 269.00 65.00 46.00 ........................................GTGCACTGTAGTCGCATTGTC.................................................................... 21 1 369.00 0.00 245.00 98.00 26.00 ........................................GTGCATTGTAGTCCCATTGTC.................................................................... 21 1 363.00 0.00 271.00 51.00 41.00 ........................................GTGCATTGTAGTCACATTGTC.................................................................... 21 1 357.00 0.00 259.00 81.00 17.00 ..........................................GCATTGTAGTCGCATTGTC.................................................................... 19 1 343.00 1.00 151.00 89.00 102.00 ........................................GTGCATTGCAGTCGCATTGTC.................................................................... 21 1 342.00 1.00 234.00 81.00 26.00 ...........................................CATTGTAGTCGCATTGTC.................................................................... 18 1 335.00 0.00 233.00 59.00 43.00 ...............................................................................CAATACAACTTCAGTGCAAGCT............................ 22 1 328.00 29.00 201.00 71.00 27.00 ........................................GTGCATTGTAGTCGCATTGC..................................................................... 20 1 314.00 1.00 234.00 70.00 9.00 ........................................GTGCGTTGTAGTCGCATTGTC.................................................................... 21 1 305.00 0.00 211.00 67.00 27.00 ........................................GTGCATTGTAGTCGCATTGGC.................................................................... 21 1 293.00 1.00 179.00 88.00 25.00 ........................................GTGCATTGTAGTTGCATTGTC.................................................................... 21 1 283.00 1.00 177.00 75.00 30.00 ........................................GTGCATTGTAGTCGCGTTGTC.................................................................... 21 1 280.00 1.00 222.00 42.00 15.00 ........................................GAGCATTGTAGTCGCATTGTC.................................................................... 21 1 260.00 2.00 167.00 69.00 22.00 ........................................GTGCATTGTAGTCGCATTATC.................................................................... 21 1 235.00 0.00 157.00 61.00 17.00 ........................................GTGCATCGTAGTCGCATTGTC.................................................................... 21 1 212.00 0.00 146.00 53.00 13.00 ........................................GTACATTGTAGTCGCATTGTC.................................................................... 21 1 211.00 1.00 145.00 44.00 21.00 ........................................GTGCATTGTAGTCxCATTGTC.................................................................... 20 1 197.00 0.00 147.00 27.00 23.00 ........................................GTGCATTTTAGTCGCATTGTC.................................................................... 21 1 189.00 0.00 131.00 54.00 4.00 .........................................GTCATTGTAGTCGCATTGTC.................................................................... 20 1 188.00 0.00 135.00 40.00 13.00 ........................................GTGCATTGTAGACGCATTGTC.................................................................... 21 1 177.00 1.00 108.00 61.00 7.00 ........................................GTGTATTGTAGTCGCATTGTC.................................................................... 21 1 161.00 1.00 111.00 26.00 23.00 ........................................GTGCATTGTAGTCGAATTGTC.................................................................... 21 1 159.00 2.00 99.00 43.00 15.00 ........................................GTGCATTGAAGTCGCATTGTC.................................................................... 21 1 156.00 1.00 110.00 37.00 8.00 ........................................GTGCATTGTAGTCGTATTGTC.................................................................... 21 1 154.00 0.00 115.00 27.00 12.00 ........................................GTGCATTATAGTCGCATTGTC.................................................................... 21 1 154.00 0.00 106.00 35.00 13.00 ........................................GTTCATTGTAGTCGCATTGTCT................................................................... 22 1 152.00 0.00 112.00 38.00 2.00 ........................................GTGCATTGTAGTCGCACTGTC.................................................................... 21 1 143.00 0.00 96.00 33.00 14.00 ........................................GTGCATTGTAGTCGCATCGTC.................................................................... 21 1 142.00 2.00 95.00 37.00 8.00 ........................................GTGCATTGTAGTAGCATTGTC.................................................................... 21 1 136.00 0.00 82.00 46.00 8.00 ........................................GTGCATTCTAGTCGCATTGTC.................................................................... 21 1 127.00 0.00 94.00 24.00 9.00 ........................................GTGCATTGTAGTxxCATTGTC.................................................................... 19 1 124.00 0.00 96.00 21.00 7.00 ........................................GTGCATTGTAGTCGCATTGTG.................................................................... 21 1 124.00 0.00 78.00 41.00 5.00 ........................................GTGCATTGTAATCGCATTGTC.................................................................... 21 1 123.00 0.00 92.00 24.00 7.00 ........................................GTGCATTGTAGTCGCATTGTCAA.................................................................. 23 1 104.00 74.00 8.00 3.00 19.00 .......................................CGTGCATTGTAGTCGCATTGTC.................................................................... 22 1 103.00 2.00 75.00 22.00 4.00 ........................................GTGCATTGTATTCGCATTGTC.................................................................... 21 1 100.00 1.00 62.00 34.00 3.00 ...........................................CATTGTAGTCGCATTGTCT................................................................... 19 1 100.00 0.00 70.00 27.00 3.00 ........................................GTGCATTGTAGTGGCATTGTC.................................................................... 21 1 95.00 0.00 66.00 27.00 2.00 ........................................GTGCATTGTAGTCGCATGG...................................................................... 19 1 89.00 0.00 49.00 36.00 4.00 ........................................GTGCATTGTAGTCGCATTGTAA................................................................... 22 1 81.00 6.00 41.00 18.00 16.00 ........................................GTGCATTGTAGTCGCATTTTC.................................................................... 21 1 80.00 2.00 43.00 33.00 2.00 ........................................GTGCATTGTACTCGCATTGTC.................................................................... 21 1 77.00 0.00 55.00 21.00 1.00 ............................................ATTGTAGTCGCATTGTCT................................................................... 18 1 75.00 0.00 50.00 22.00 3.00 ........................................GTCCATTGTAGTCGCATTGTCT................................................................... 22 1 70.00 0.00 53.00 13.00 4.00 ...............................................................................CAATACAACTTCAGTGCAAGC............................. 21 1 66.00 6.00 53.00 7.00 0.00 ........................................TTGCATTGTAGTCGCATTG...................................................................... 19 1 66.00 0.00 50.00 14.00 2.00 ........................................TTGCATTGTAGTCGCATTGT..................................................................... 20 1 62.00 0.00 46.00 12.00 4.00 ........................................GTGCATTGTAGTCGCTTTGTC.................................................................... 21 1 57.00 1.00 51.00 3.00 2.00 ........................................GTGGATTGTAGTCGCATTGTC.................................................................... 21 1 57.00 0.00 35.00 17.00 5.00 ........................................GTGCTTTGTAGTCGCATTGTC.................................................................... 21 1 57.00 2.00 44.00 9.00 2.00 ........................................TTGCATTGTAGTCGCATTGTCT................................................................... 22 1 55.00 0.00 42.00 13.00 0.00 ........................................GTGCATTGTAGTCTCATTG...................................................................... 19 1 54.00 0.00 28.00 26.00 0.00 ........................................GTGCATTGTAGTCGGATTGTC.................................................................... 21 1 53.00 0.00 33.00 14.00 6.00 ........................................GTGCATTGTGGTCGCATTGT..................................................................... 20 1 52.00 0.00 45.00 7.00 0.00 ........................................GTGCATTGTAGTCGCATTCTC.................................................................... 21 1 48.00 1.00 31.00 15.00 1.00 ........................................GTGCATTGTAGTCGCATTGTCTT.................................................................. 23 1 47.00 1.00 24.00 22.00 0.00 ........................................GTGAATTGTAGTCGCATTGTC.................................................................... 21 1 45.00 2.00 18.00 24.00 1.00 .............................................................TGTCCCAATTGCTTCAGG.................................................. 18 1 45.00 38.00 1.00 1.00 5.00 .........................................GTCATTGTAGTCGCATTGTCT................................................................... 21 1 44.00 0.00 31.00 13.00 0.00 ........................................GTGCATTGTAGTCGCATTGA..................................................................... 20 1 42.00 0.00 23.00 19.00 0.00 ........................................GTGCATGGTAGTCGCATTGTC.................................................................... 21 1 38.00 0.00 27.00 9.00 2.00 ........................................GTGCATTGTGGTCGCATTGTCT................................................................... 22 1 38.00 1.00 26.00 11.00 0.00 ........................................GTGCAATGTAGTCGCATTGTC.................................................................... 21 1 37.00 0.00 21.00 11.00 5.00 ........................................GTGCATTGTAGTCGCCTTGTC.................................................................... 21 1 37.00 9.00 18.00 8.00 2.00 .........................................TGCATTGTAGTCGCATTGTCT................................................................... 21 1 34.00 0.00 27.00 6.00 1.00 ........................................GTGCATTGTCGTCGCATTGTC.................................................................... 21 1 32.00 5.00 13.00 12.00 2.00 ........................................GTGCATTGTGGTCGCATTGTA.................................................................... 21 1 32.00 0.00 19.00 13.00 0.00 ...............................................................................CAATGCAACTTCAGTGCAAGCT............................ 22 1 32.00 0.00 30.00 2.00 0.00 ........................................TTGCATTGTAGTCGCATTGTA.................................................................... 21 1 30.00 0.00 23.00 5.00 2.00 ........................................GTGCATTGTTGTCGCATTGTC.................................................................... 21 1 29.00 1.00 21.00 6.00 1.00 ........................................GTGCATxxTAGTCGCATTGTC.................................................................... 19 1 29.00 0.00 25.00 3.00 1.00 ........................................GTGCATTGTAGTCxCATTG...................................................................... 18 1 29.00 0.00 20.00 8.00 1.00 ........................................GTGCCTTGTAGTCGCATTGTC.................................................................... 21 1 26.00 3.00 12.00 8.00 3.00 ........................................GTGCATTGTAGTCGCAATGTC.................................................................... 21 1 26.00 0.00 21.00 1.00 4.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_29:452742-452870 +	96.92	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CTGAGTGCCACCAGACTCTTCCTCCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACACAACGCCGAATG Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ........................................GTGCATTGTAGTCGCATTGTC.................................................................... 21 1 29975.00 7643.00 2655.00 19677.00 ........................................GTGCATTGTAGTCGCATTGT..................................................................... 20 1 10668.00 3668.00 294.00 6706.00 ...............................................................................CAATACAACTTCAGTGCAAGCT............................ 22 1 4409.00 1793.00 251.00 2365.00 ........................................GTGCATTGTAGTCGCATTGTCT................................................................... 22 1 1460.00 363.00 17.00 1080.00 ........................................GTGCATTGTAGTCGCATTG...................................................................... 19 1 799.00 67.00 21.00 711.00 ........................................GTGCATTGTAGTCGCATTGTCA................................................................... 22 1 491.00 109.00 43.00 339.00 ........................................GTGCATTGTAGTCGCATTGTCTG.................................................................. 23 1 484.00 124.00 42.00 318.00 ........................................GTGCATTGTAGTCGCATTGTT.................................................................... 21 1 481.00 131.00 8.00 342.00 ........................................GTGCATTGTGGTCGCATTGTC.................................................................... 21 1 446.00 54.00 6.00 386.00 .............................................................TGTCCCAATTGCTTCAGG.................................................. 18 1 301.00 0.00 269.00 32.00 ...............................................................................CAATACAACTTCAGTGCAAG.............................. 20 1 151.00 24.00 4.00 123.00 ...............................................................................CAATGCAACTTCAGTGCAAGCT............................ 22 1 140.00 24.00 0.00 116.00 ........................................GTGCATTGTAGTCGCATTGTA.................................................................... 21 1 125.00 26.00 4.00 95.00 ...............................................................................CAATACAACTTCAGTGCAAGC............................. 21 1 117.00 22.00 10.00 85.00 ........................................GTGCATTGTAGTCGCATTCTC.................................................................... 21 1 88.00 62.00 3.00 23.00 ........................................GTGCATTGTAGTCGCATTATC.................................................................... 21 1 82.00 54.00 1.00 27.00 ........................................GTGCATTGTAGTCGCATT....................................................................... 18 1 77.00 1.00 5.00 71.00 .......................................CGTGCATTGTAGTCGCATTGTC.................................................................... 22 1 62.00 11.00 9.00 42.00 ...............................................................................CAATACAACTTCAGTGCAAGCTT........................... 23 1 60.00 34.00 1.00 25.00 ........................................GCGCATTGTAGTCGCATTGTC.................................................................... 21 1 57.00 27.00 5.00 25.00 ........................................GTGCATTGTAGTCGCATTGCC.................................................................... 21 1 55.00 10.00 3.00 42.00 ........................................TTGCATTGTAGTCGCATTGTC.................................................................... 21 1 54.00 11.00 2.00 41.00 ........................................GTGCATTGTAGTCGCATTTTC.................................................................... 21 1 53.00 40.00 0.00 13.00 ...............................................................................CAATACAACTTCAGTGCAAGCTA........................... 23 1 51.00 21.00 1.00 29.00 ........................................GTGCATTGTAGTCGCGTTGTC.................................................................... 21 1 50.00 16.00 1.00 33.00 ........................................GTGCATTGTAGTCGCCTTGTC.................................................................... 21 1 44.00 16.00 3.00 25.00 ........................................GTGCATTGTAGTCCCATTGTC.................................................................... 21 1 43.00 5.00 5.00 33.00 ........................................GTGCATTGTAGCCGCATTGTC.................................................................... 21 1 43.00 16.00 5.00 22.00 ........................................GTGCATTGTAGTCTCATTGTC.................................................................... 21 1 42.00 7.00 5.00 30.00 ........................................GTGCATTGTAGTCGCATTGTCG................................................................... 22 1 41.00 8.00 3.00 30.00 ........................................GTGCATTGCAGTCGCATTGTC.................................................................... 21 1 40.00 11.00 1.00 28.00 ........................................GTGCATTGTAGTCGTATTGTC.................................................................... 21 1 39.00 8.00 16.00 15.00 ........................................GTGCATTGTAGTCGCATTAT..................................................................... 20 1 38.00 34.00 0.00 4.00 ........................................GTGCACTGTAGTCGCATTGTC.................................................................... 21 1 37.00 6.00 1.00 30.00 ........................................GTGCATTGTAGTCGCGTTGT..................................................................... 20 1 37.00 11.00 0.00 26.00 ........................................GTTCATTGTAGTCGCATTGTC.................................................................... 21 1 36.00 8.00 0.00 28.00 ........................................GTGCATTGTAGTxxCATTGTC.................................................................... 19 1 36.00 7.00 1.00 28.00 ........................................GTGCATTGTAGTTGCATTGTC.................................................................... 21 1 36.00 5.00 9.00 22.00 ........................................GTGCATTGTAGTCGCATTGTCAA.................................................................. 23 1 35.00 1.00 22.00 12.00 ........................................GTGCCTTGTAGTCGCATTGTC.................................................................... 21 1 34.00 8.00 1.00 25.00 ........................................GTGCATTGTAGTCGCATTGTCTGT................................................................. 24 1 33.00 20.00 0.00 13.00 ........................................GTGCATTGTAGTCGCATTCT..................................................................... 20 1 32.00 24.00 0.00 8.00 ...............................................................................CAATACAACTGCAGTGCAAGCT............................ 22 1 31.00 6.00 0.00 25.00 ........................................GTGCATTGTAGTCGCATTGAC.................................................................... 21 1 30.00 2.00 0.00 28.00 ........................................GTGCAATGTAGTCGCATTGTC.................................................................... 21 1 29.00 1.00 0.00 28.00 ................................................................................AATACAACTTCAGTGCAAGCT............................ 21 1 29.00 13.00 2.00 14.00 ........................................GTGCATTGTGGTCGCATTGT..................................................................... 20 1 29.00 5.00 2.00 22.00 ........................................GTGAATTGTAGTCGCATTGTC.................................................................... 21 1 27.00 3.00 0.00 24.00 ........................................GTGCATTGTAGTCACATTGTC.................................................................... 21 1 27.00 6.00 3.00 18.00 ........................................GTGCATTGTAGTCxCATTGT..................................................................... 19 1 27.00 4.00 0.00 23.00 ........................................GTGCATTGTAGTCGCATTGC..................................................................... 20 1 26.00 7.00 1.00 18.00 ........................................GTGCATTGTAGTCGCATTGTAA................................................................... 22 1 26.00 12.00 5.00 9.00 ........................................GTGCATTGTAGTCGCATTTT..................................................................... 20 1 26.00 22.00 1.00 3.00 ........................................GTGCATTGTAGTCxCATTGTC.................................................................... 20 1 25.00 0.00 1.00 24.00 ........................................GTGCATCGTAGTCGCATTGTC.................................................................... 21 1 25.00 6.00 4.00 15.00 ........................................GTGCATAGTAGTCGCATTGTC.................................................................... 21 1 25.00 0.00 0.00 25.00 ........................................GTGCATTGCAGTCGCATTGT..................................................................... 20 1 25.00 8.00 0.00 17.00 ........................................GTCCATTGTAGTCGCATTGTC.................................................................... 21 1 24.00 6.00 4.00 14.00 ........................................GTGCATTGAAGTCGCATTGTC.................................................................... 21 1 24.00 5.00 1.00 18.00 ........................................GAGCATTGTAGTCGCATTGTC.................................................................... 21 1 24.00 1.00 0.00 23.00 ........................................GTGCATTGTAGCCGCATTGT..................................................................... 20 1 24.00 3.00 0.00 21.00 ........................................GTGCATTGTATTCGCATTGTC.................................................................... 21 1 22.00 4.00 1.00 17.00 ........................................GTGCATTATAGTCGCATTGTC.................................................................... 21 1 22.00 1.00 1.00 20.00 ........................................GTGCATTGTAGTCGCCTTGT..................................................................... 20 1 21.00 9.00 1.00 11.00 ........................................GTGCATTGTGGTCGCATTGTCT................................................................... 22 1 21.00 3.00 0.00 18.00 ........................................GTGTATTGTAGTCGCATTGTC.................................................................... 21 1 21.00 1.00 12.00 8.00 ........................................GTGCATTGTACTCGCATTGTC.................................................................... 21 1 21.00 3.00 3.00 15.00 ........................................GTGCATTGTAGTCGCATTGTCC................................................................... 22 1 21.00 0.00 2.00 19.00 ........................................GTGCATTGTAGTCGTATTGT..................................................................... 20 1 20.00 8.00 6.00 6.00 ........................................GTGCATTCTAGTCGCATTGTC.................................................................... 21 1 20.00 5.00 2.00 13.00 ........................................GTGCATTGTAGTCGCATCGTC.................................................................... 21 1 20.00 6.00 1.00 13.00 ........................................GTGCATTGTAGTCCCATTGT..................................................................... 20 1 20.00 3.00 1.00 16.00 ........................................GCGCATTGTAGTCGCATTGT..................................................................... 20 1 19.00 11.00 0.00 8.00 ........................................GTGCATTGTAGTCGCTTTGT..................................................................... 20 1 19.00 7.00 0.00 12.00 ..........................................GCATTGTAGTCGCATTGTC.................................................................... 19 1 18.00 7.00 7.00 4.00 ........................................GTGCGTTGTAGTCGCATTGTC.................................................................... 21 1 18.00 7.00 1.00 10.00 ........................................TTGCATTGTAGTCGCATTGT..................................................................... 20 1 17.00 5.00 0.00 12.00 ........................................GTGCATTGTAGTCGCATTGA..................................................................... 20 1 17.00 3.00 0.00 14.00 ........................................GGGCATTGTAGTCGCATTGTC.................................................................... 21 1 17.00 12.00 0.00 5.00 ........................................GTGCATTGTAGTCGCTTTGTC.................................................................... 21 1 17.00 3.00 9.00 5.00 ...............................................................................CAATACAACTTCAGTGCACGCT............................ 22 1 17.00 15.00 0.00 2.00 ........................................GTGCATTGTAGACGCATTGTC.................................................................... 21 1 16.00 3.00 3.00 10.00 ........................................GTACATTGTAGTCGCATTGTC.................................................................... 21 1 16.00 4.00 0.00 12.00 .......................................CGTGCATTGTAGTCGCATTGT..................................................................... 21 1 16.00 3.00 2.00 11.00 ........................................GTGCATTGTAGTCGCATTGTCTT.................................................................. 23 1 15.00 6.00 0.00 9.00 ........................................GTGCATTGTAATCGCATTGTC.................................................................... 21 1 15.00 4.00 3.00 8.00 ...............................................................................CAATACAACTTCAGTGCATGCT............................ 22 1 14.00 14.00 0.00 0.00 ........................................GTGCATTGTAGTTGCATTGT..................................................................... 20 1 14.00 3.00 0.00 11.00 ........................................GTGCATTGTGGTCGCGTTGTC.................................................................... 21 1 13.00 2.00 0.00 11.00 ........................................GTGCATTGTAGTCTCATTGT..................................................................... 20 1 13.00 2.00 0.00 11.00 ........................................GAGCATTGTAGTCGCATTGT..................................................................... 20 1 13.00 3.00 0.00 10.00 ........................................GTGCATTTTAGTCGCATTGTC.................................................................... 21 1 13.00 3.00 2.00 8.00 ...............................................................................CAATACAACTTCAGTTCAAGCT............................ 22 1 13.00 3.00 1.00 9.00 ........................................GTGCATTGTAGTCGCACTGTC.................................................................... 21 1 13.00 5.00 1.00 7.00 ........................................ATGCATTGTAGTCGCATTGTC.................................................................... 21 1 12.00 2.00 2.00 8.00 ........................................GTGCATTGTAGTAGCATTGTC.................................................................... 21 1 12.00 0.00 3.00 9.00 ........................................GTGCATTGAAGTCGCATTGT..................................................................... 20 1 12.00 2.00 0.00 10.00 ........................................GTGCATTGTxxTCGCATTGTC.................................................................... 19 1 12.00 3.00 1.00 8.00 ........................................GTGCATTGTAGTCGAATTGTC.................................................................... 21 1 11.00 2.00 0.00 9.00 ........................................CTGCATTGTAGTCGCATTGTC.................................................................... 21 1 11.00 2.00 1.00 8.00 ........................................GTGCATTGTAGTCGCATTGTTT................................................................... 22 1 11.00 5.00 0.00 6.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr3L:20771315-20771443 -	93.87	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CTGAGTGCCACCAGACTCTTACTCCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAACAACGCCGAGTG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ........................................GTGCATTGTAGTCGCATTGTC.................................................................... 21 1 117517.00 659.00 4612.00 1290.00 6766.00 104190.00 ........................................GTGCATTGTAGTCGCATTGT..................................................................... 20 1 6160.00 139.00 1781.00 946.00 2642.00 652.00 ........................................GTGCATTGTAGTCGCATTGTCT................................................................... 22 1 2040.00 27.00 180.00 105.00 277.00 1451.00 ........................................GTGCATTGTAGTCGCATTGTCA................................................................... 22 1 983.00 533.00 37.00 21.00 39.00 353.00 ........................................GTGCATTGTGGTCGCATTGTC.................................................................... 21 1 753.00 0.00 64.00 8.00 85.00 596.00 ........................................GTGCATTGTAGTCGCATTG...................................................................... 19 1 742.00 26.00 167.00 22.00 197.00 330.00 ........................................GTGCATTGTAGTCGCATTGAC.................................................................... 21 1 680.00 1.00 3.00 1.00 3.00 672.00 ........................................GTGCATTGTAGTCGCATTGTA.................................................................... 21 1 570.00 31.00 11.00 5.00 9.00 514.00 ........................................TTGCATTGTAGTCGCATTGTC.................................................................... 21 1 399.00 0.00 0.00 1.00 7.00 391.00 ........................................GTGCATTGTAGTCGCATTTTC.................................................................... 21 1 377.00 4.00 105.00 0.00 256.00 12.00 ........................................GTGCATTGTAGTCGCATTGTT.................................................................... 21 1 306.00 2.00 44.00 19.00 86.00 155.00 ........................................GTGCATTGTAGTCGCATTGTCC................................................................... 22 1 289.00 5.00 5.00 0.00 16.00 263.00 ........................................GTGCATTGTAGTCGCATTGTCTG.................................................................. 23 1 231.00 19.00 35.00 22.00 58.00 97.00 ........................................GTGCATTGTAGTCGCCTTGTC.................................................................... 21 1 224.00 3.00 32.00 2.00 185.00 2.00 ........................................GTGCATTGTAGTCGCATTGCC.................................................................... 21 1 217.00 2.00 8.00 1.00 37.00 169.00 ...............................................................................CAATACAACTTCAGTGCAAGCT............................ 22 1 189.00 19.00 36.00 60.00 64.00 10.00 ........................................GGGCATTGTAGTCGCATTGTC.................................................................... 21 1 181.00 3.00 35.00 4.00 118.00 21.00 ........................................GCGCATTGTAGTCGCATTGTC.................................................................... 21 1 144.00 6.00 14.00 0.00 43.00 81.00 ........................................GTGCATTGTAGCCGCATTGTC.................................................................... 21 1 140.00 1.00 14.00 3.00 41.00 81.00 ........................................GTGCATTGTAGTCTCATTGTC.................................................................... 21 1 139.00 2.00 16.00 2.00 20.00 99.00 ........................................CTGCATTGTAGTCGCATTGTC.................................................................... 21 1 139.00 1.00 1.00 0.00 8.00 129.00 ........................................GTTCATTGTAGTCGCATTGTC.................................................................... 21 1 116.00 0.00 0.00 0.00 3.00 113.00 ........................................GTGCATTGTAGTCGCATTGGC.................................................................... 21 1 113.00 0.00 2.00 3.00 17.00 91.00 ........................................ATGCATTGTAGTCGCATTGTC.................................................................... 21 1 104.00 1.00 10.00 0.00 17.00 76.00 ........................................GTGCATTGTAGTCGCATTTT..................................................................... 20 1 96.00 0.00 30.00 1.00 65.00 0.00 ........................................GTGCATTGTAGTCACATTGTC.................................................................... 21 1 91.00 0.00 14.00 2.00 11.00 64.00 ........................................GTGCATTGCAGTCGCATTGTC.................................................................... 21 1 85.00 0.00 3.00 2.00 14.00 66.00 ........................................GTGCATTGTAGTTGCATTGTC.................................................................... 21 1 80.00 0.00 6.00 1.00 12.00 61.00 ........................................GTGCATTGTAGTCGCATTGC..................................................................... 20 1 78.00 0.00 3.00 8.00 17.00 50.00 ........................................GTGCACTGTAGTCGCATTGTC.................................................................... 21 1 77.00 0.00 5.00 0.00 7.00 65.00 .........................................TGCATTGTAGTCGCATTGTC.................................................................... 20 1 77.00 0.00 3.00 0.00 3.00 71.00 ........................................GTGCATTGTAGTCGCGTTGTC.................................................................... 21 1 71.00 2.00 8.00 1.00 24.00 36.00 ........................................GTGCATTGTAGTCGCATT....................................................................... 18 1 67.00 0.00 15.00 0.00 34.00 18.00 ........................................GTGCATTGTAGGCGCATTGTC.................................................................... 21 1 67.00 0.00 13.00 1.00 43.00 10.00 ........................................GTGCATTGTAGTCGCCTTGT..................................................................... 20 1 66.00 0.00 14.00 1.00 51.00 0.00 ........................................GTGCGTTGTAGTCGCATTGTC.................................................................... 21 1 66.00 0.00 10.00 1.00 18.00 37.00 ........................................GTGCATTGTCGTCGCATTGTC.................................................................... 21 1 65.00 0.00 7.00 0.00 42.00 16.00 ........................................GTGCATTGGAGTCGCATTGTC.................................................................... 21 1 62.00 1.00 3.00 1.00 27.00 30.00 ........................................GTCCATTGTAGTCGCATTGTC.................................................................... 21 1 61.00 0.00 3.00 4.00 3.00 51.00 ........................................GTGCATTGTAGTCGCATTGTCG................................................................... 22 1 61.00 1.00 4.00 4.00 7.00 45.00 ........................................GTGCATTGTAGTCCCATTGTC.................................................................... 21 1 59.00 0.00 5.00 2.00 11.00 41.00 ........................................GTGCATTGTAGTCGCATTGG..................................................................... 20 1 52.00 1.00 3.00 1.00 7.00 40.00 ........................................GGGCATTGTAGTCGCATTGT..................................................................... 20 1 50.00 0.00 8.00 2.00 39.00 1.00 ........................................GTGCATTGTAGTCGCATTGTCAA.................................................................. 23 1 50.00 41.00 2.00 1.00 4.00 2.00 .......................................CGTGCATTGTAGTCGCATTGTC.................................................................... 22 1 48.00 3.00 16.00 0.00 14.00 15.00 ........................................GTGCATCGTAGTCGCATTGTC.................................................................... 21 1 47.00 0.00 2.00 1.00 5.00 39.00 ........................................GTGCATTGTAGTCGCATTATC.................................................................... 21 1 46.00 1.00 10.00 1.00 3.00 31.00 ........................................GTGCATTTTAGTCGCATTGTC.................................................................... 21 1 44.00 2.00 7.00 1.00 8.00 26.00 ........................................GTGCATTGTAGTAGCATTGTC.................................................................... 21 1 42.00 0.00 6.00 0.00 16.00 20.00 ........................................GAGCATTGTAGTCGCATTGTC.................................................................... 21 1 41.00 0.00 10.00 1.00 23.00 7.00 ........................................GTGCATTGTAGTCGCATCGTC.................................................................... 21 1 39.00 0.00 7.00 1.00 10.00 21.00 .............................................................TGTCCCAATTGCTTCAGG.................................................. 18 1 38.00 26.00 6.00 0.00 3.00 3.00 ........................................GTACATTGTAGTCGCATTGTC.................................................................... 21 1 37.00 1.00 3.00 0.00 5.00 28.00 ........................................GTGCCTTGTAGTCGCATTGTC.................................................................... 21 1 36.00 0.00 2.00 0.00 34.00 0.00 ........................................GTGCATTGTAGTCGCACTGTC.................................................................... 21 1 36.00 1.00 5.00 0.00 9.00 21.00 ........................................GTGCATTGTAGTCGAATTGTC.................................................................... 21 1 36.00 1.00 7.00 2.00 11.00 15.00 ........................................GTGTATTGTAGTCGCATTGTC.................................................................... 21 1 35.00 0.00 2.00 0.00 8.00 25.00 ........................................GTGCATTGTGGTCGCATTGT..................................................................... 20 1 35.00 2.00 9.00 1.00 17.00 6.00 ...........................................CATTGTAGTCGCATTGTC.................................................................... 18 1 34.00 0.00 0.00 1.00 0.00 33.00 ........................................GTGCATTGTATTCGCATTGTC.................................................................... 21 1 34.00 1.00 2.00 0.00 16.00 15.00 ........................................GTGCATTGTAGTCGTATTGTC.................................................................... 21 1 31.00 1.00 5.00 0.00 3.00 22.00 ........................................GTGCATTGTAGACGCATTGTC.................................................................... 21 1 30.00 2.00 2.00 0.00 7.00 19.00 ........................................GTGCATTATAGTCGCATTGTC.................................................................... 21 1 29.00 0.00 7.00 0.00 2.00 20.00 ..........................................GCATTGTAGTCGCATTGTC.................................................................... 19 1 29.00 0.00 1.00 3.00 3.00 22.00 .........................................GTCATTGTAGTCGCATTGTC.................................................................... 20 1 28.00 0.00 0.00 0.00 0.00 28.00 ........................................GTGCATTCTAGTCGCATTGTC.................................................................... 21 1 28.00 1.00 0.00 0.00 6.00 21.00 ........................................GTGCATTGTAGTCGCTTTGTC.................................................................... 21 1 25.00 0.00 1.00 3.00 20.00 1.00 ........................................GTGCATTGTAGTCGCATTCTC.................................................................... 21 1 24.00 0.00 4.00 0.00 16.00 4.00 ........................................GTGCATTGTAGTxxCATTGTC.................................................................... 19 1 24.00 0.00 0.00 2.00 0.00 22.00 ........................................GTGCATTGTAATCGCATTGTC.................................................................... 21 1 24.00 1.00 3.00 0.00 7.00 13.00 ...............................................................................CAATGCAACTTCAGTGCAAGCT............................ 22 1 24.00 0.00 10.00 3.00 9.00 2.00 ........................................GTGCATTGTAGTCTCATTGT..................................................................... 20 1 22.00 0.00 8.00 0.00 13.00 1.00 ........................................GTGCATTGAAGTCGCATTGTC.................................................................... 21 1 22.00 0.00 1.00 0.00 3.00 18.00 ........................................GTGCATTGTAGTCGCATTGTAA................................................................... 22 1 21.00 12.00 5.00 0.00 3.00 1.00 ........................................GAGCATTGTAGTCGCATTGT..................................................................... 20 1 20.00 0.00 2.00 1.00 17.00 0.00 ........................................GTGCATTGTAGTGGCATTGTC.................................................................... 21 1 20.00 0.00 0.00 0.00 1.00 19.00 ........................................GTGCATTGTAGCCGCATTGT..................................................................... 20 1 19.00 0.00 4.00 0.00 12.00 3.00 ........................................GTGCATTGTACTCGCATTGTC.................................................................... 21 1 19.00 0.00 4.00 0.00 5.00 10.00 ........................................GCGCATTGTAGTCGCATTGT..................................................................... 20 1 19.00 0.00 5.00 4.00 10.00 0.00 ........................................GTGCATTGTAGTCxCATTGTC.................................................................... 20 1 18.00 0.00 0.00 0.00 0.00 18.00 ........................................GTGCATTGTAGTCGCATA....................................................................... 18 1 18.00 0.00 7.00 0.00 10.00 1.00 ........................................GTGCATTGTAGTCGCATGGTC.................................................................... 21 1 18.00 0.00 3.00 0.00 15.00 0.00 ........................................GTGCATTGTAGTCGCATTGTCTT.................................................................. 23 1 16.00 0.00 3.00 2.00 6.00 5.00 ........................................GTGCATTGTAGGCGCATTGT..................................................................... 20 1 16.00 0.00 2.00 0.00 14.00 0.00 ........................................GTGCGTTGTAGTCGCATTGT..................................................................... 20 1 16.00 0.00 5.00 1.00 9.00 1.00 ........................................GTGCCTTGTAGTCGCATTGT..................................................................... 20 1 16.00 1.00 3.00 0.00 12.00 0.00 ........................................GTGGATTGTAGTCGCATTGTC.................................................................... 21 1 15.00 1.00 5.00 0.00 3.00 6.00 ........................................GTGCATTGTCGTCGCATTGT..................................................................... 20 1 15.00 0.00 2.00 0.00 13.00 0.00 ........................................GTGCATTGTAGTCGCATTGTG.................................................................... 21 1 15.00 0.00 4.00 0.00 4.00 7.00 ........................................GTGAATTGTAGTCGCATTGTC.................................................................... 21 1 14.00 0.00 4.00 0.00 6.00 4.00 ........................................GTGCATTGTAGTCGCGTTGT..................................................................... 20 1 14.00 0.00 4.00 1.00 9.00 0.00 ........................................GTGCAATGTAGTCGCATTGTC.................................................................... 21 1 14.00 0.00 4.00 0.00 1.00 9.00 ........................................GTGCATTGTATTCGCATTGT..................................................................... 20 1 14.00 0.00 2.00 0.00 12.00 0.00 ........................................GTGCATTGTAGTCGCTTTGT..................................................................... 20 1 14.00 0.00 0.00 3.00 11.00 0.00 ........................................GGGCATTGTAGTCGCCTTGTC.................................................................... 21 1 14.00 0.00 0.00 0.00 14.00 0.00 ........................................GTTCATTGTAGTCGCATTGTCT................................................................... 22 1 14.00 0.00 0.00 0.00 0.00 14.00 ........................................GTGCAGTGTAGTCGCATTGTC.................................................................... 21 1 14.00 1.00 1.00 0.00 11.00 1.00 ........................................GTGCTTTGTAGTCGCATTGTC.................................................................... 21 1 13.00 0.00 1.00 0.00 8.00 4.00 ........................................GTGCATTGTAGTCGCATTT...................................................................... 19 1 13.00 0.00 6.00 1.00 6.00 0.00 ........................................GTGCATTGCAGTCGCATTGT..................................................................... 20 1 13.00 1.00 3.00 0.00 9.00 0.00 ........................................GTGCATTGTAGTAGCATTGT..................................................................... 20 1 12.00 0.00 3.00 0.00 8.00 1.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4784:19550563-19550691 +	93.87	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CTGAGTGCCACCAGACTCTCACTCCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAACAACGCCGAGTG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ........................................GTGCATTGTAGTCGCATTGTC.................................................................... 21 1 32781.00 402.00 6394.00 0.00 25985.00 ........................................GTGCATTGTAGTCGCATTGT..................................................................... 20 1 7231.00 46.00 1479.00 0.00 5706.00 ........................................GTGCATTGTAGTCGCATTGTCT................................................................... 22 1 1958.00 5.00 249.00 0.00 1704.00 ...............................................................................CAATACAACTTCAGTGCAAGCT............................ 22 1 1725.00 14.00 212.00 0.00 1499.00 ........................................GTGCATTGTAGTCGCATTG...................................................................... 19 1 1074.00 7.00 140.00 0.00 927.00 ........................................GTGCATTGTAGTCGCATTGTCA................................................................... 22 1 693.00 66.00 42.00 0.00 585.00 ........................................GTGCATTGTAGTCGCATTGTCTG.................................................................. 23 1 533.00 17.00 56.00 0.00 460.00 ........................................GTGCATTGTAGTCGCATTTTC.................................................................... 21 1 326.00 16.00 227.00 0.00 83.00 ........................................GTGCATTGTAGTCGCATTGTT.................................................................... 21 1 234.00 3.00 53.00 0.00 178.00 ...............................................................................CAATACAACTTCAGTGCAAG.............................. 20 1 204.00 0.00 11.00 0.00 193.00 ........................................GTGCATTGTGGTCGCATTGTC.................................................................... 21 1 198.00 0.00 54.00 0.00 144.00 ........................................GTGCATTGTAGTCGCATTGTA.................................................................... 21 1 187.00 1.00 16.00 0.00 170.00 .............................................................TGTCCCAATTGCTTCAGG.................................................. 18 1 185.00 8.00 2.00 0.00 175.00 ...............................................................................CAATACAACTTCAGTGCAAGC............................. 21 1 170.00 0.00 22.00 0.00 148.00 ........................................GTGCATTGTAGTAGCATTGTC.................................................................... 21 1 157.00 1.00 5.00 0.00 151.00 ........................................GTGCATTGTAGTCTCATTGTC.................................................................... 21 1 146.00 4.00 15.00 0.00 127.00 ........................................GTTCATTGTAGTCGCATTGTC.................................................................... 21 1 131.00 0.00 1.00 0.00 130.00 ........................................GTGCATTGTAGTCGCATT....................................................................... 18 1 118.00 0.00 8.00 0.00 110.00 ........................................GTGAATTGTAGTCGCATTGTC.................................................................... 21 1 117.00 0.00 2.00 0.00 115.00 ........................................GTGCATTGTAGTCGAATTGTC.................................................................... 21 1 116.00 0.00 15.00 0.00 101.00 ........................................GTGCATTGTAGTCGCCTTGTC.................................................................... 21 1 94.00 4.00 54.00 0.00 36.00 ........................................GTGCATTGTATTCGCATTGTC.................................................................... 21 1 93.00 0.00 15.00 0.00 78.00 ........................................TTGCATTGTAGTCGCATTGTC.................................................................... 21 1 88.00 0.00 4.00 0.00 84.00 ........................................GCGCATTGTAGTCGCATTGTC.................................................................... 21 1 74.00 1.00 18.00 0.00 55.00 .......................................CGTGCATTGTAGTCGCATTGTC.................................................................... 22 1 69.00 0.00 21.00 0.00 48.00 ........................................GGGCATTGTAGTCGCATTGTC.................................................................... 21 1 68.00 3.00 46.00 0.00 19.00 ...............................................................................CAATGCAACTTCAGTGCAAGCT............................ 22 1 67.00 0.00 11.00 0.00 56.00 ........................................GTGCATTGTAGTCGCATTTT..................................................................... 20 1 66.00 1.00 40.00 0.00 25.00 ........................................GTGCATTTTAGTCGCATTGTC.................................................................... 21 1 64.00 0.00 4.00 0.00 60.00 ........................................GTGCATTGTAGCCGCATTGTC.................................................................... 21 1 63.00 1.00 14.00 0.00 48.00 ........................................GTGCATTGTAGTCGCATTGCC.................................................................... 21 1 62.00 2.00 18.00 0.00 42.00 ........................................GTGCATTGTAGTCACATTGTC.................................................................... 21 1 57.00 2.00 17.00 0.00 38.00 ........................................ATGCATTGTAGTCGCATTGTC.................................................................... 21 1 55.00 3.00 15.00 0.00 37.00 ........................................GTACATTGTAGTCGCATTGTC.................................................................... 21 1 53.00 1.00 6.00 0.00 46.00 ........................................GTGCATTGTAGTCTCATTGT..................................................................... 20 1 52.00 0.00 12.00 0.00 40.00 ........................................GTGCCTTGTAGTCGCATTGTC.................................................................... 21 1 51.00 2.00 6.00 0.00 43.00 ........................................GTGCATTGTAGTCGCATTGTCG................................................................... 22 1 47.00 2.00 12.00 0.00 33.00 ........................................GTGCATTGTAGTCGCGTTGTC.................................................................... 21 1 45.00 0.00 16.00 0.00 29.00 ........................................GTGCATTGCAGTCGCATTGTC.................................................................... 21 1 43.00 0.00 11.00 0.00 32.00 ........................................GTGCATTGTAGTTGCATTGTC.................................................................... 21 1 38.00 1.00 5.00 0.00 32.00 ........................................GTGCATTGTAGTCGTATTGTC.................................................................... 21 1 37.00 0.00 9.00 0.00 28.00 ........................................GTGCATTGTAGTCGCATTGTCTT.................................................................. 23 1 37.00 1.00 4.00 0.00 32.00 ........................................GTGCATTGTAGTCCCATTGTC.................................................................... 21 1 32.00 0.00 4.00 0.00 28.00 ........................................GTGCATTGTAGTCGCATTGTCC................................................................... 22 1 32.00 0.00 5.00 0.00 27.00 ........................................GTGCATTGTAGTAGCATTGT..................................................................... 20 1 31.00 0.00 3.00 0.00 28.00 ........................................GTGCATTGTAGTCGCCTTGT..................................................................... 20 1 31.00 1.00 14.00 0.00 16.00 ........................................GTCCATTGTAGTCGCATTGTC.................................................................... 21 1 30.00 0.00 0.00 0.00 30.00 ........................................GTGCATTGTAGTCxCATTGTC.................................................................... 20 1 29.00 0.00 1.00 0.00 28.00 ........................................GTGCATTGTAGTxxCATTGTC.................................................................... 19 1 29.00 0.00 0.00 0.00 29.00 ........................................GTTCATTGTAGTCGCATTGT..................................................................... 20 1 29.00 0.00 0.00 0.00 29.00 ........................................GTGCATTGTAGTCGCATTGTCAA.................................................................. 23 1 29.00 7.00 2.00 0.00 20.00 ........................................GTGCATTGTAGTCGCATCGTC.................................................................... 21 1 29.00 0.00 5.00 0.00 24.00 ........................................GTGCATCGTAGTCGCATTGTC.................................................................... 21 1 27.00 0.00 0.00 0.00 27.00 ........................................GTGCATTGTAGTCGCACTGTC.................................................................... 21 1 27.00 1.00 5.00 0.00 21.00 ........................................GTGCATTATAGTCGCATTGTC.................................................................... 21 1 27.00 0.00 8.00 0.00 19.00 ........................................GTGCATTGTAGTCGAATTGT..................................................................... 20 1 27.00 0.00 2.00 0.00 25.00 ........................................GTGCGTTGTAGTCGCATTGTC.................................................................... 21 1 27.00 0.00 5.00 0.00 22.00 ........................................GTGCATTGTAGTCGCATTCTC.................................................................... 21 1 26.00 0.00 5.00 0.00 21.00 ........................................GTGCACTGTAGTCGCATTGTC.................................................................... 21 1 26.00 0.00 7.00 0.00 19.00 ........................................GTGCATTGTAGTCGCTTTGTC.................................................................... 21 1 25.00 1.00 8.00 0.00 16.00 ........................................GTGTATTGTAGTCGCATTGTC.................................................................... 21 1 25.00 0.00 6.00 0.00 19.00 .........................................TGCATTGTAGTCGCATTGTC.................................................................... 20 1 25.00 0.00 3.00 0.00 22.00 ........................................GTGAATTGTAGTCGCATTGT..................................................................... 20 1 24.00 0.00 2.00 0.00 22.00 ........................................TTGCATTGTAGTCGCATTGT..................................................................... 20 1 23.00 0.00 1.00 0.00 22.00 ........................................GTGCATTGTAGTCGCATTGTAA................................................................... 22 1 23.00 3.00 2.00 0.00 18.00 ..........................................GCATTGTAGTCGCATTGTC.................................................................... 19 1 23.00 1.00 2.00 0.00 20.00 ........................................GTGCATTGTAGGCGCATTGTC.................................................................... 21 1 22.00 2.00 13.00 0.00 7.00 ........................................GTGCATTGTACTCGCATTGTC.................................................................... 21 1 22.00 3.00 3.00 0.00 16.00 ........................................GTGCATTGTCGTCGCATTGTC.................................................................... 21 1 22.00 4.00 8.00 0.00 10.00 ........................................GTGCATTGTAGTCGCATTATC.................................................................... 21 1 21.00 0.00 9.00 0.00 12.00 .........................................GTCATTGTAGTCGCATTGTC.................................................................... 20 1 20.00 0.00 0.00 0.00 20.00 ........................................GTGCATTGTAGTCGCATTGTCTGT................................................................. 24 1 19.00 0.00 2.00 0.00 17.00 ........................................GTGCATTGTAGTCGCATTGC..................................................................... 20 1 19.00 0.00 5.00 0.00 14.00 ........................................GTGCATTGTxxTCGCATTGTC.................................................................... 19 1 18.00 0.00 0.00 0.00 18.00 ........................................GTGCATTGAAGTCGCATTGTC.................................................................... 21 1 18.00 1.00 5.00 0.00 12.00 ........................................GGGCATTGTAGTCGCATTGT..................................................................... 20 1 17.00 1.00 12.00 0.00 4.00 ........................................GAGCATTGTAGTCGCATTGTC.................................................................... 21 1 16.00 0.00 7.00 0.00 9.00 ................................................................................AATACAACTTCAGTGCAAGCT............................ 21 1 16.00 0.00 6.00 0.00 10.00 ...............................................................................AAATACAACTTCAGTGCAAGCT............................ 22 1 15.00 0.00 0.00 0.00 15.00 ...............................................................................CAATGCAACTTCAGTGCAAG.............................. 20 1 15.00 0.00 0.00 0.00 15.00 ........................................GTGCATTGTATTCGCATTGT..................................................................... 20 1 15.00 0.00 1.00 0.00 14.00 ...............................................................................CAATACAACTTCAGTGCA................................ 18 1 15.00 0.00 0.00 0.00 15.00 ...............................................................................CAATACAACTTCAGTGCAAGCTT........................... 23 1 15.00 0.00 0.00 0.00 15.00 ........................................GTGCATTGTAATCGCATTGTC.................................................................... 21 1 15.00 0.00 2.00 0.00 13.00 ........................................GTGCATTGTAGCCGCATTGT..................................................................... 20 1 14.00 0.00 4.00 0.00 10.00 ........................................GTGCATTCTAGTCGCATTGTC.................................................................... 21 1 14.00 0.00 2.00 0.00 12.00 ........................................GTGCATTGTAGTCGTATTGT..................................................................... 20 1 13.00 0.00 0.00 0.00 13.00 ........................................GTGCATTGTAGACGCATTGTC.................................................................... 21 1 13.00 1.00 4.00 0.00 8.00 ........................................GTGCATTGTAGTCGCTTTGT..................................................................... 20 1 13.00 0.00 3.00 0.00 10.00 ........................................CTGCATTGTAGTCGCATTGTC.................................................................... 21 1 13.00 0.00 1.00 0.00 12.00 ...........................................CATTGTAGTCGCATTGTC.................................................................... 18 1 13.00 0.00 0.00 0.00 13.00 ........................................GTGCATTGTAGTCGCATGGTC.................................................................... 21 1 13.00 0.00 5.00 0.00 8.00 ........................................GTGCATTGTAGTCxCATTGT..................................................................... 19 1 13.00 0.00 0.00 0.00 13.00 ........................................GTGCATTGTGGTCGCATTGT..................................................................... 20 1 13.00 0.00 5.00 0.00 8.00 ........................................GTGCATTGTAGTCGCATA....................................................................... 18 1 12.00 0.00 1.00 0.00 11.00 ........................................GTGCATTGTAGTCGxATTGTC.................................................................... 20 1 12.00 0.00 0.00 0.00 12.00 ........................................GTGGATTGTAGTCGCATTGTC.................................................................... 21 1 12.00 1.00 2.00 0.00 9.00 ........................................GTGCATTGTAGTCGCATTGA..................................................................... 20 1 12.00 0.00 3.00 0.00 9.00 ........................................GTGCATTGTAGTCGCATTTTCT................................................................... 22 1 12.00 0.00 7.00 0.00 5.00 ........................................GTGCATTGGAGTCGCATTGTC.................................................................... 21 1 11.00 0.00 8.00 0.00 3.00 ........................................GTGCTTTGTAGTCGCATTGTC.................................................................... 21 1 11.00 1.00 3.00 0.00 7.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000454113:2506718-2506846 -	88.53	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGAATGCCAGAGGACTCTTCCAACGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAACAACGTCAATTG Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409466:5133811-5133939 -	87.0	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGAATGCCAGCAGGCTCTATCTCCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTCCACTTGCTTCAGGCAATACAACTTCAGTGCAAACTCTGTGCATTTCACAAACAACGCCGACGG Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302193:5876354-5876482 -	89.29	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGATTGCCAGCAGACTCCTCATCCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTTCCACTTGCCTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAACAACGCCGACTG Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415773:734789-734918 +	84.92	CTGAGTGCCACCAGACTCTTCCTC-TGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGAATGCCAGTTGACTCCTCATCCCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCACTCGCTTCAGGCAATACAACTTCAGTGCAAGCTCCGAGCATTTCACAAACAACGCCGACAG Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000491193:4070917-4071045 +	87.77	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGGATGCCAGCAGACTCTTCCTCCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCCACTTGCCTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAACATCGTCGACCG Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000773422:131623-131751 -	87.77	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGAATGCCAGCAGACTACTCCTTCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCCACTTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTTACAAGCAACGCCGACTG Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302391:683560-683701 -	64.76	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGT--CCCAAT---TGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG--------------- GTGACACCCACAGAACG---CCTCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTTCCCAATATATCCTCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAGCAAC----AATGCTCTTTCCTTTTTAG Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13337:19456783-19456919 -	75.11	CTGAGTGCCACCAGACTCT--------TCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGAATACCAGCAGACACTATACACCCGCCCTCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCCCACTTGCTCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAACAACGCCAACTT Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ................................................GTGCATTGTAGTCGCATTGTC.................................................................... 21 1 16957.00 1678.00 11589.00 3577.00 113.00 .......................................................................................CAATACAACTGCAGTGCAAGCT............................ 22 1 13372.00 1292.00 11802.00 260.00 18.00 ................................................GTGCATTGTAGTCGCATTGT..................................................................... 20 1 12114.00 2906.00 6509.00 2601.00 98.00 ................................................GTGCATTGTAGTCGCATTGTCT................................................................... 22 1 2334.00 166.00 1889.00 262.00 17.00 .......................................................................................CAATACAACTGCAGTGCAAGC............................. 21 1 1359.00 102.00 1085.00 161.00 11.00 ................................................GTGCATTGTAGTCGCATTG...................................................................... 19 1 1121.00 119.00 738.00 236.00 28.00 ................................................GTGCATTGTAGTCGCATTGTCA................................................................... 22 1 807.00 12.00 265.00 24.00 506.00 ................................................GTGCATTGTAGTCGCATTGTT.................................................................... 21 1 616.00 101.00 391.00 123.00 1.00 ................................................GTTCATTGTAGTCGCATTGTC.................................................................... 21 1 326.00 17.00 307.00 1.00 1.00 .......................................................................................CAATGCAACTGCAGTGCAAGCT............................ 22 1 313.00 7.00 300.00 6.00 0.00 .......................................................................................CAATACAACTGCAGTGCAAGCTT........................... 23 1 264.00 38.00 215.00 11.00 0.00 ................................................GTGCATTGTAGTCGCATTGTA.................................................................... 21 1 234.00 26.00 165.00 16.00 27.00 .......................................................................................CAATACAACTGCAGTGCAAGAT............................ 22 1 203.00 22.00 181.00 0.00 0.00 .......................................................................................CAATACAACTGCAGTGCAAG.............................. 20 1 192.00 18.00 170.00 3.00 1.00 .......................................................................................CAATACAACTGCAGTGCAATCT............................ 22 1 164.00 11.00 151.00 2.00 0.00 ................................................GTTCATTGTAGTCGCATTGT..................................................................... 20 1 156.00 12.00 143.00 1.00 0.00 ................................................GTGCATTGTAGTCGCATTGTCAA.................................................................. 23 1 127.00 0.00 12.00 0.00 115.00 ........................................................................................AATACAACTGCAGTGCAAGCT............................ 21 1 123.00 10.00 111.00 2.00 0.00 .......................................................................................CAATGCAACTGCAGTGCAAGC............................. 21 1 104.00 1.00 96.00 7.00 0.00 ................................................GTGCATTGTAGTCTCATTGTC.................................................................... 21 1 99.00 9.00 71.00 16.00 3.00 ................................................GTGCATTGTAGTCGAATTGTC.................................................................... 21 1 82.00 9.00 64.00 9.00 0.00 ................................................GCGCATTGTAGTCGCATTGTC.................................................................... 21 1 81.00 10.00 20.00 50.00 1.00 ................................................GTGCATTGTAGTCGCATTTTC.................................................................... 21 1 80.00 0.00 23.00 51.00 6.00 ................................................GGGCATTGTAGTCGCATTGTC.................................................................... 21 1 78.00 6.00 16.00 55.00 1.00 ................................................GTGCATTGTAGTCTCATTGT..................................................................... 20 1 72.00 21.00 45.00 5.00 1.00 ................................................GTGCATTGTAGTCGCATT....................................................................... 18 1 70.00 6.00 31.00 32.00 1.00 ................................................GCGCATTGTAGTCGCATTGT..................................................................... 20 1 60.00 12.00 11.00 35.00 2.00 .......................................................................................CAATACAACTTCAGTGCAAGCT............................ 22 1 60.00 9.00 51.00 0.00 0.00 ................................................GTGAATTGTAGTCGCATTGTC.................................................................... 21 1 59.00 4.00 41.00 14.00 0.00 .......................................................................................CAATACAACTGAAGTGCAAGCT............................ 22 1 59.00 3.00 54.00 2.00 0.00 .......................................................................................CAATACAACTGCAGTGAAAGCT............................ 22 1 57.00 4.00 53.00 0.00 0.00 ................................................GTTCATTGTAGTCGCATTGTCT................................................................... 22 1 57.00 1.00 55.00 1.00 0.00 ................................................GTGCATTGTAGTCGCATTGCC.................................................................... 21 1 55.00 6.00 16.00 33.00 0.00 ................................................GGGCATTGTAGTCGCATTGT..................................................................... 20 1 55.00 9.00 5.00 40.00 1.00 ................................................GTGCATTGTAGCCGCATTGTC.................................................................... 21 1 51.00 6.00 10.00 35.00 0.00 ................................................GTGCATTGTAGTCGAATTGT..................................................................... 20 1 51.00 5.00 42.00 4.00 0.00 ................................................GTGAATTGTAGTCGCATTGT..................................................................... 20 1 49.00 12.00 32.00 5.00 0.00 ................................................GTGCATTGTAGTCGCATTGTTT................................................................... 22 1 45.00 11.00 20.00 14.00 0.00 ................................................GTGCATTGTAGTCGCATTGTCG................................................................... 22 1 44.00 9.00 17.00 11.00 7.00 ................................................GAGCATTGTAGTCGCATTGT..................................................................... 20 1 42.00 7.00 2.00 33.00 0.00 ................................................GTGCATTGTAGCCGCATTGT..................................................................... 20 1 42.00 11.00 7.00 24.00 0.00 ................................................GTGCATTGTAGTAGCATTGT..................................................................... 20 1 41.00 13.00 24.00 4.00 0.00 .......................................................................................CAATACAACTGCAGTTCAAGCT............................ 22 1 40.00 7.00 32.00 1.00 0.00 ................................................GTGCATTGTAGTAGCATTGTC.................................................................... 21 1 39.00 8.00 24.00 6.00 1.00 ................................................GTGCATTGTAGTCGCCTTGTC.................................................................... 21 1 38.00 4.00 4.00 28.00 2.00 ................................................GAGCATTGTAGTCGCATTGTC.................................................................... 21 1 36.00 2.00 5.00 29.00 0.00 ................................................GTGCATTGCAGTCGCATTGTC.................................................................... 21 1 36.00 3.00 14.00 19.00 0.00 .......................................................................................CAATACAACTGCAGTGCAATC............................. 21 1 35.00 0.00 31.00 3.00 1.00 ................................................GTGCATTGTAGTCGCATTGTG.................................................................... 21 1 35.00 8.00 21.00 5.00 1.00 ................................................GTGCATTGTAGGCGCATTGTC.................................................................... 21 1 34.00 5.00 4.00 25.00 0.00 ................................................GTGCATTGTAGACGCATTGT..................................................................... 20 1 31.00 22.00 1.00 8.00 0.00 .......................................................................................AAATACAACTGCAGTGCAAGCT............................ 22 1 31.00 1.00 29.00 1.00 0.00 ................................................GTGCATTGTAGTCGCATTGC..................................................................... 20 1 30.00 5.00 4.00 20.00 1.00 .......................................................................................CAGTACAACTGCAGTGCAAGCT............................ 22 1 30.00 1.00 29.00 0.00 0.00 ................................................GTGCATTGCAGTCGCATTGT..................................................................... 20 1 29.00 5.00 9.00 14.00 1.00 .......................................................................................TAATACAACTGCAGTGCAAGCT............................ 22 1 29.00 5.00 21.00 3.00 0.00 ................................................GTGCATTGAAGTCGCATTGT..................................................................... 20 1 28.00 6.00 12.00 9.00 1.00 ................................................GTGCATTGTAGTCGCGTTGTC.................................................................... 21 1 27.00 3.00 21.00 3.00 0.00 ................................................GTGCATTGTAGTCGCATTTT..................................................................... 20 1 27.00 1.00 9.00 15.00 2.00 .......................................................................................CAATGCAACTGCAGTGCAAGCTT........................... 23 1 27.00 0.00 23.00 4.00 0.00 .......................................................................................CAATACAACTGCAGTGCAAGT............................. 21 1 27.00 4.00 23.00 0.00 0.00 .......................................................................................CAATACGACTGCAGTGCAAGCT............................ 22 1 27.00 1.00 26.00 0.00 0.00 ................................................GTTCATTGTAGTCGCATTG...................................................................... 19 1 27.00 4.00 22.00 1.00 0.00 ................................................GTGCATTGTATTCGCATTGTC.................................................................... 21 1 26.00 0.00 22.00 3.00 1.00 ................................................GTGCATTGGAGTCGCATTGT..................................................................... 20 1 26.00 4.00 3.00 19.00 0.00 ................................................GTGCATTGTAGTCGCCTTGT..................................................................... 20 1 26.00 1.00 5.00 19.00 1.00 ................................................GTGCATTGTAGTTGCATTGT..................................................................... 20 1 26.00 10.00 10.00 6.00 0.00 ................................................GTGCATTGTAGGCGCATTGT..................................................................... 20 1 25.00 6.00 0.00 19.00 0.00 ................................................GTGCATTGTAGTCACATTGT..................................................................... 20 1 25.00 12.00 5.00 8.00 0.00 ................................................GTGCATTGTAGTCGCATCGTC.................................................................... 21 1 25.00 4.00 12.00 9.00 0.00 ................................................GTGCATTGGAGTCGCATTGTC.................................................................... 21 1 24.00 3.00 2.00 18.00 1.00 ................................................GTGCATTGTAGACGCATTGTC.................................................................... 21 1 24.00 10.00 8.00 6.00 0.00 ................................................GTGCATTGTAGTCGCATTGTAA................................................................... 22 1 23.00 1.00 9.00 3.00 10.00 ................................................GTGCATTGTAGTCGCATTGTCTT.................................................................. 23 1 23.00 1.00 21.00 1.00 0.00 ................................................GTGTATTGTAGTCGCATTGTC.................................................................... 21 1 23.00 4.00 16.00 3.00 0.00 ................................................GTGCATTGAAGTCGCATTGTC.................................................................... 21 1 23.00 5.00 9.00 9.00 0.00 ................................................GTGCATTGTAGTCGCATTTTCA................................................................... 22 1 22.00 0.00 1.00 0.00 21.00 ................................................GTGCATTGTAGTCGCATTCTC.................................................................... 21 1 22.00 1.00 4.00 17.00 0.00 ................................................GTGCACTGTAGTCGCATTGTC.................................................................... 21 1 22.00 1.00 19.00 2.00 0.00 ................................................GTGCATTGTAGTCGCATTGA..................................................................... 20 1 22.00 2.00 15.00 3.00 2.00 ................................................GTGCATTGTAGTTGCATTGTC.................................................................... 21 1 22.00 2.00 16.00 4.00 0.00 ................................................GTGCATTGTGGTCGCATTGTC.................................................................... 21 1 22.00 0.00 14.00 7.00 1.00 ................................................GTGCGTTGTAGTCGCATTGTC.................................................................... 21 1 21.00 3.00 8.00 10.00 0.00 .......................................................................................CAATACAACTGCAGTGCGAGCT............................ 22 1 21.00 2.00 19.00 0.00 0.00 ................................................GTGCATTGTAGTCGCGTTGT..................................................................... 20 1 21.00 9.00 8.00 4.00 0.00 .......................................................................................CAATACAACTGCATTGCAAGCT............................ 22 1 20.00 5.00 13.00 1.00 1.00 ................................................GTGCATTGTATTCGCATTGT..................................................................... 20 1 20.00 4.00 9.00 7.00 0.00 ................................................GTGCATTGTAGTCGCATTT...................................................................... 19 1 20.00 5.00 9.00 4.00 2.00 ................................................GTTCATTGTAGTCGCATTGTT.................................................................... 21 1 19.00 0.00 19.00 0.00 0.00 ................................................GTGCATTGTAGTCACATTGTC.................................................................... 21 1 19.00 3.00 8.00 8.00 0.00 .......................................................................................CAATACAACTGCGGTGCAAGCT............................ 22 1 18.00 2.00 15.00 1.00 0.00 ................................................GTGCATTGTAGTCCCATTGTC.................................................................... 21 1 18.00 3.00 7.00 8.00 0.00 .......................................................................................CAATACAACTGCAGTGCAAGTT............................ 22 1 17.00 2.00 15.00 0.00 0.00 ................................................GTCCATTGTAGTCGCATTGTC.................................................................... 21 1 17.00 2.00 12.00 3.00 0.00 .......................................................................................CAATGCGACTGCAGTGCAAGCT............................ 22 1 17.00 1.00 14.00 2.00 0.00 ................................................GTGCATTGTAGTCGCATTGTAT................................................................... 22 1 17.00 1.00 13.00 3.00 0.00 .......................................................................................CAATACAACTGCAGTGCAGGCT............................ 22 1 17.00 1.00 15.00 1.00 0.00 ................................................GTGCATCGTAGTCGCATTGT..................................................................... 20 1 16.00 4.00 6.00 6.00 0.00 ................................................GTGCATCGTAGTCGCATTGTC.................................................................... 21 1 16.00 1.00 9.00 5.00 1.00 .......................................................................................CAATACAACTACAGTGCAAGCT............................ 22 1 16.00 6.00 10.00 0.00 0.00 .......................................................................................CAATACAACTGCAGTGCAAGCG............................ 22 1 16.00 3.00 13.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396360:652043-652179 -	75.11	CTGAGTGCCACCAGACTCT--------TCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATACAACGCCGAATG CCGAATACCAGCAGACACTATTCACCCGCCTTCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCCCGCTTGCTCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAACAACGCCACCTG Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrXR_group6:5913809-5913939 +	76.69	CTGAGTGCCACCAGACTCTTCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCCAATTGCT-TCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAACGCCG---AATG AAAAACCAAACCAAACACTCCC---GGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCATCTTGATTTCAGGCAATACAACTGCAATGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCCAATG Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ........................................GTGCATTGTAGTCGCATTGTC......................................................................... 21 1 22475.00 3934.00 698.00 7939.00 9904.00 ........................................GTGCATTGTAGTCGCATTGT.......................................................................... 20 1 4239.00 1890.00 148.00 2073.00 128.00 ................................................................................CAATACAACTGCAATGCAAGCT................................ 22 1 1358.00 1080.00 42.00 233.00 3.00 ........................................GTGCATTGTAGTCGCATTGTCT........................................................................ 22 1 626.00 188.00 26.00 155.00 257.00 ........................................GTGCATTGTAGTCGCATTGTCA........................................................................ 22 1 516.00 74.00 262.00 112.00 68.00 ........................................GTGCATTGTAGTCGCATTG........................................................................... 19 1 386.00 73.00 39.00 197.00 77.00 ........................................GTGCATTGTAGTCGCATTGTT......................................................................... 21 1 234.00 98.00 1.00 82.00 53.00 ........................................GTGCATTGTAGTCGCATTGTA......................................................................... 21 1 175.00 19.00 29.00 35.00 92.00 ........................................GTGCATTGTAGTCGCATTGTCC........................................................................ 22 1 121.00 18.00 3.00 79.00 21.00 ........................................GGGCATTGTAGTCGCATTGTC......................................................................... 21 1 74.00 0.00 6.00 61.00 7.00 .............................................................TGTCCATCTTGATTTCAGG...................................................... 19 1 71.00 1.00 66.00 4.00 0.00 ........................................GTGCATTGTAGTCGCATTGCC......................................................................... 21 1 66.00 4.00 3.00 43.00 16.00 ........................................GTGCATTGTAGTCGCATTTTC......................................................................... 21 1 66.00 2.00 3.00 61.00 0.00 ........................................GCGCATTGTAGTCGCATTGTC......................................................................... 21 1 63.00 14.00 7.00 37.00 5.00 ........................................GTGCATTGTAGTCGCATT............................................................................ 18 1 60.00 0.00 0.00 39.00 21.00 ........................................GTGCATTGTAGTCGCATTGTCAA....................................................................... 23 1 48.00 5.00 29.00 14.00 0.00 ........................................GTGCATTGTAGTCGCCTTGTC......................................................................... 21 1 43.00 2.00 5.00 36.00 0.00 ........................................GTGCATTGTAGTCGCATTGTAA........................................................................ 22 1 42.00 11.00 8.00 20.00 3.00 ........................................GTGCATTGTAGCCGCATTGTC......................................................................... 21 1 41.00 8.00 4.00 27.00 2.00 ........................................TTGCATTGTAGTCGCATTGTC......................................................................... 21 1 39.00 9.00 0.00 6.00 24.00 ........................................GTGCATTGTAGTAGCATTGTC......................................................................... 21 1 37.00 3.00 1.00 15.00 18.00 ........................................GTACATTGTAGTCGCATTGTC......................................................................... 21 1 35.00 1.00 2.00 26.00 6.00 ........................................GAGCATTGTAGTCGCATTGTC......................................................................... 21 1 31.00 2.00 2.00 27.00 0.00 ........................................GTGCATTGTAGTCGCATTGAC......................................................................... 21 1 29.00 0.00 0.00 6.00 23.00 ........................................GTGCATTGCAGTCGCATTGTC......................................................................... 21 1 27.00 7.00 0.00 16.00 4.00 ........................................GTGCATTGTAGTCGCATCGTC......................................................................... 21 1 26.00 4.00 0.00 19.00 3.00 ........................................GTGCATTGTAGTCTCATTGTC......................................................................... 21 1 26.00 5.00 2.00 9.00 10.00 ........................................GTGCATTGTAGTCGCATTGTCG........................................................................ 22 1 24.00 3.00 5.00 14.00 2.00 ........................................GTGCATTGTAGTCGCATTGTCTG....................................................................... 23 1 24.00 7.00 1.00 14.00 2.00 ........................................GTGCATTGTAGTCGAATTGTC......................................................................... 21 1 24.00 0.00 3.00 16.00 5.00 ........................................GTGCATTGTAGTGGCATTGTC......................................................................... 21 1 24.00 0.00 0.00 2.00 22.00 .......................................CGTGCATTGTAGTCGCATTGTC......................................................................... 22 1 23.00 6.00 2.00 12.00 3.00 ........................................GTCCATTGTAGTCGCATTGTC......................................................................... 21 1 23.00 4.00 0.00 13.00 6.00 ................................................................................CAATACAACTGCAATGCAAGC................................. 21 1 23.00 8.00 5.00 9.00 1.00 ........................................GGGCATTGTAGTCGCATTGT.......................................................................... 20 1 21.00 0.00 2.00 19.00 0.00 ........................................GTTCATTGTAGTCGCATTGTC......................................................................... 21 1 21.00 12.00 0.00 5.00 4.00 ........................................GTGCATTGTAGGCGCATTGTC......................................................................... 21 1 20.00 0.00 4.00 15.00 1.00 ................................................................................CAATACAACTGCAATGCAAG.................................. 20 1 19.00 10.00 4.00 5.00 0.00 ........................................GTGCATTGTAGTCGCATTGC.......................................................................... 20 1 19.00 4.00 0.00 11.00 4.00 ........................................GTGCATTGTAGTCGCATTCTC......................................................................... 21 1 18.00 2.00 0.00 16.00 0.00 ........................................GTGCATTGTAGTCGCTTTGTC......................................................................... 21 1 18.00 4.00 3.00 10.00 1.00 .................................................................................AATACAACTGCAATGCAAGCT................................ 21 1 18.00 16.00 0.00 2.00 0.00 ........................................GTGCATTGTAGTCGCCTTGT.......................................................................... 20 1 18.00 4.00 2.00 12.00 0.00 ........................................GTGCATTGGAGTCGCATTGTC......................................................................... 21 1 18.00 0.00 3.00 11.00 4.00 ........................................GTGCATTGTAGTCGCATTGGC......................................................................... 21 1 17.00 0.00 1.00 6.00 10.00 ........................................GTGCATTGTGGTCGCATTGTC......................................................................... 21 1 17.00 3.00 2.00 7.00 5.00 ........................................GTGCATTGTAGTCGCATTTT.......................................................................... 20 1 16.00 2.00 0.00 14.00 0.00 ........................................GTGCATTGTAGTTGCATTGTC......................................................................... 21 1 16.00 3.00 2.00 7.00 4.00 ........................................GTGCATTGTAGTCGCACTGTC......................................................................... 21 1 16.00 4.00 2.00 7.00 3.00 ........................................CTGCATTGTAGTCGCATTGTC......................................................................... 21 1 16.00 2.00 2.00 6.00 6.00 ........................................GTGCATTGTAGCCGCATTGT.......................................................................... 20 1 15.00 2.00 1.00 12.00 0.00 ........................................GTGCATTGTAGTCGTATTGTC......................................................................... 21 1 14.00 3.00 2.00 7.00 2.00 ........................................ATGCATTGTAGTCGCATTGTC......................................................................... 21 1 14.00 1.00 3.00 7.00 3.00 ................................................................................CAATGCAACTGCAATGCAAGCT................................ 22 1 14.00 3.00 0.00 11.00 0.00 ........................................GTGCATTGTAGTCCCATTGTC......................................................................... 21 1 14.00 0.00 1.00 12.00 1.00 ........................................GCGCATTGTAGTCGCATTGT.......................................................................... 20 1 13.00 6.00 0.00 6.00 1.00 ................................................................................CAATACAACTGCAATGCAAGCTT............................... 23 1 13.00 7.00 1.00 5.00 0.00 ........................................GTGCATTGTAGTCGCGTTGTC......................................................................... 21 1 13.00 2.00 0.00 9.00 2.00 ........................................GTGCATTGTCGTCGCATTGTC......................................................................... 21 1 12.00 1.00 3.00 8.00 0.00 ........................................GTGCACTGTAGTCGCATTGTC......................................................................... 21 1 12.00 2.00 1.00 4.00 5.00 ........................................GTGCATTGAAGTCGCATTGTC......................................................................... 21 1 11.00 2.00 0.00 6.00 3.00 ........................................GTGAATTGTAGTCGCATTGTC......................................................................... 21 1 11.00 2.00 2.00 7.00 0.00 ........................................GTGCTTTGTAGTCGCATTGTC......................................................................... 21 1 11.00 2.00 0.00 5.00 4.00 ........................................GTGCCTTGTAGTCGCATTGTC......................................................................... 21 1 10.00 2.00 0.00 8.00 0.00 ........................................GTGCATTGTAGTCACATTGTC......................................................................... 21 1 10.00 2.00 3.00 2.00 3.00 ........................................GTGCGTTGTAGTCGCATTGTC......................................................................... 21 1 10.00 0.00 1.00 6.00 3.00 ........................................GTGCATTGTATTCGCATTGTC......................................................................... 21 1 10.00 5.00 0.00 5.00 0.00 ..........................................GCATTGTAGTCGCATTGTC......................................................................... 19 1 10.00 1.00 0.00 2.00 7.00 ........................................GTGCATCGTAGTCGCATTGTC......................................................................... 21 1 10.00 6.00 0.00 2.00 2.00 ........................................GTGCATTGTAGTxxCATTGTC......................................................................... 19 1 9.00 7.00 0.00 0.00 2.00 ........................................GTGTATTGTAGTCGCATTGTC......................................................................... 21 1 9.00 2.00 1.00 6.00 0.00 ........................................GGGCATTGTAGGCGCATTGTC......................................................................... 21 1 8.00 0.00 1.00 7.00 0.00 ...........................................CATTGTAGTCGCATTGTC......................................................................... 18 1 8.00 2.00 0.00 0.00 6.00 ........................................GTGCATTGTAGGCGCATTGT.......................................................................... 20 1 8.00 0.00 1.00 7.00 0.00 .......................................CGTGCATTGTAGTCGCATTGT.......................................................................... 21 1 8.00 7.00 0.00 1.00 0.00 ........................................GTGCATTGTAGACGCATTGTC......................................................................... 21 1 8.00 1.00 2.00 5.00 0.00 ........................................GTGCATTGTAGTCGCATTGTTT........................................................................ 22 1 8.00 4.00 0.00 3.00 1.00 ........................................GTGCATTGTAGTCGCTTTGT.......................................................................... 20 1 8.00 3.00 4.00 1.00 0.00 ........................................GTGCATTGTAGTCTCATTGT.......................................................................... 20 1 7.00 3.00 0.00 4.00 0.00 ................................................................................CAATACAACTGCAATGCAA................................... 19 1 7.00 1.00 0.00 6.00 0.00 ........................................GTGCATTGTAGTCGCATGGTC......................................................................... 21 1 7.00 0.00 1.00 6.00 0.00 ........................................GTGCATTGTAGTCxCATTGTC......................................................................... 20 1 7.00 6.00 0.00 0.00 1.00 ........................................GTGCATTGTAGTCGCATTGTG......................................................................... 21 1 7.00 0.00 0.00 7.00 0.00 ........................................GGGCAGTGTAGTCGCATTGTC......................................................................... 21 1 7.00 0.00 0.00 7.00 0.00 ........................................GTGCATTTTAGTCGCATTGTC......................................................................... 21 1 7.00 1.00 0.00 2.00 4.00 .......................................GGTGCATTGTAGTCGCATTGTC......................................................................... 22 1 7.00 0.00 1.00 2.00 4.00 ................................................................................CAGTACAACTGCAATGCAAGCT................................ 22 1 7.00 4.00 0.00 3.00 0.00 ........................................GTGCATTGTACTCGCATTGTC......................................................................... 21 1 7.00 2.00 1.00 3.00 1.00 ........................................GAGCATTGTAGTCGCATTGT.......................................................................... 20 1 6.00 1.00 0.00 5.00 0.00 ........................................GTGCATTGTAGTCGCATTCT.......................................................................... 20 1 6.00 0.00 0.00 6.00 0.00 ........................................GGGCATTGTAGCCGCATTGTC......................................................................... 21 1 6.00 0.00 0.00 6.00 0.00 ........................................GTGCATTATAGTCGCATTGTC......................................................................... 21 1 6.00 0.00 0.00 2.00 4.00 ........................................GTGCATTGTAGTCGCATTT........................................................................... 19 1 6.00 0.00 0.00 6.00 0.00 ........................................GTGCATTGTAGTCGAATTGT.......................................................................... 20 1 6.00 0.00 0.00 6.00 0.00 ........................................GTGCATTGTAGTCGTTTT............................................................................ 18 1 6.00 1.00 0.00 4.00 1.00 ........................................GTGCATTGCAGTCGCATTGT.......................................................................... 20 1 6.00 1.00 0.00 5.00 0.00 ........................................GTGCATTGTAGTCGCATTGA.......................................................................... 20 1 6.00 0.00 3.00 2.00 1.00 ........................................GTGCATTGTAGTCGCATTATC......................................................................... 21 1 6.00 0.00 0.00 4.00 2.00 ........................................TTGCATTGTAGTCGCATTGT.......................................................................... 20 1 6.00 4.00 0.00 2.00 0.00 .........................................TGCATTGTAGTCGCATTGTC......................................................................... 20 1 6.00 1.00 0.00 2.00 3.00 ........................................GTGCATTGTAGTTGCATTGT.......................................................................... 20 1 5.00 0.00 1.00 4.00 0.00

droPer1 - 1 hit found