Possible Orthologs for dme-mir-318

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr3R:15159142-15159239 -	96.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTTAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 255.00 6.00 129.00 33.00 87.00 .........................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 219.00 1.00 145.00 43.00 30.00 .........................................................TCACTGGGCTTTGTTTATCT..................... 20 1 21.00 1.00 14.00 2.00 4.00 .........................................................TCACTGGGCTTTGTTTATC...................... 19 1 8.00 0.00 5.00 3.00 0.00 .........................................................TCACTGGGCTTTGTTTATCTCG................... 22 1 8.00 0.00 6.00 0.00 2.00 .........................................................TCGCTGGGCTTTGTTTATCTC.................... 21 1 2.00 0.00 1.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 1 2.00 0.00 0.00 0.00 2.00 .........................................................TCACTGGGCTCTGTTTATCTCT................... 22 1 1.00 1.00 0.00 0.00 0.00 .........................................................TCACTGGGCTTTCTTTATCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 .........................................................TCACTGGGCTTTATTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 .........................................................TCACTAGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 ..........................................................CACTGGGCTTTGTTTATCTC.................... 20 1 1.00 0.00 1.00 0.00 0.00 .........................................................TCCCTGGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTCATCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 .........................................................TCACTGGGCTTTGTTTATCTCAAAA................ 25 1 1.00 1.00 0.00 0.00 0.00 ...........................................................CCTGGGCTTTGTTTATCTC.................... 19 1 1.00 0.00 1.00 0.00 0.00 ........................................................ATCACTGGGCTTTGTTTATC...................... 20 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 1.00 1.00 0.00 0.00 0.00 .........................................................TCACTGGGCTGTGTTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 .........................................................TCACTGGACTTTGTTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 .........................................................TCACTGGGCCTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 0.00 1.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	super_0:15709308-15709405 -	97.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 5745.00 1084.00 7.00 4654.00 .........................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 659.00 151.00 0.00 508.00 .........................................................TCACTGGGCTTTGTTTATCT..................... 20 1 161.00 38.00 0.00 123.00 ...........................................................ACTGGGCTTTGTTTATCTCA................... 20 1 32.00 4.00 0.00 28.00 .........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 1 23.00 5.00 0.00 18.00 .........................................................TCACTGGGCTTTGTTTATTTCA................... 22 1 12.00 8.00 0.00 4.00 .........................................................TCACTGGGCTTTGTTTATATCA................... 22 1 10.00 9.00 0.00 1.00 .........................................................TCACTGGGCTTTGTCTATCTCA................... 22 1 9.00 0.00 0.00 9.00 .........................................................TCACTGGGCTTTGTTTATCCCA................... 22 1 9.00 3.00 0.00 6.00 .........................................................TCAATGGGCTTTGTTTATCTCA................... 22 1 8.00 1.00 0.00 7.00 ..........................................................CACTGGGCTTTGTTTATCTCA................... 21 1 8.00 2.00 0.00 6.00 .........................................................TCACTGGCCTTTGTTTATCTCA................... 22 1 7.00 1.00 0.00 6.00 .........................................................TCACTGGTCTTTGTTTATCTCA................... 22 1 7.00 1.00 0.00 6.00 .........................................................TCACTGGGCTTTGTTTGTCTCA................... 22 1 7.00 1.00 0.00 6.00 .........................................................TCGCTGGGCTTTGTTTATCTCA................... 22 1 6.00 0.00 0.00 6.00 .........................................................TAACTGGGCTTTGTTTATCTCA................... 22 1 6.00 0.00 0.00 6.00 .........................................................TCACAGGGCTTTGTTTATCTCA................... 22 1 6.00 0.00 0.00 6.00 .........................................................TCACTGGGCTTTGTTTCTCTCA................... 22 1 6.00 1.00 0.00 5.00 .........................................................TCACTGGGCTTTTTTTATCTCA................... 22 1 6.00 0.00 0.00 6.00 .........................................................TCACTGGGCTTTGCTTATCTCA................... 22 1 6.00 1.00 0.00 5.00 .........................................................TCACTGGGCCTTGTTTATCTCA................... 22 1 6.00 1.00 0.00 5.00 .........................................................TCACTGGGCTTTGxTTATCTCA................... 21 1 5.00 0.00 0.00 5.00 .........................................................TCACTGGACTTTGTTTATCTCA................... 22 1 5.00 1.00 0.00 4.00 .........................................................TCACTGGGCTTTCTTTATCTCA................... 22 1 5.00 1.00 0.00 4.00 .........................................................CCACTGGGCTTTGTTTATCTCA................... 22 1 5.00 1.00 0.00 4.00 .........................................................TCACTGAGCTTTGTTTATCTCA................... 22 1 5.00 1.00 0.00 4.00 .........................................................TCACTTGGCTTTGTTTATCTCA................... 22 1 4.00 0.00 0.00 4.00 .........................................................TCACTGGGCTTTGTTTATGTCA................... 22 1 4.00 3.00 0.00 1.00 .........................................................TCACTAGGCTTTGTTTATCTCA................... 22 1 4.00 0.00 0.00 4.00 .........................................................TCACTGGGATTTGTTTATCTCA................... 22 1 4.00 0.00 0.00 4.00 .........................................................TCACTGGGCTTTGTTTATCTAA................... 22 1 4.00 2.00 0.00 2.00 .........................................................TCACTGGGCTTTGTTTACCTCA................... 22 1 4.00 1.00 0.00 3.00 .........................................................TCACTGGGTTTTGTTTATCTCA................... 22 1 4.00 0.00 0.00 4.00 .........................................................TCACTGGGCATTGTTTATCTCA................... 22 1 4.00 0.00 0.00 4.00 .........................................................TCACTGGGCTTTGTTTATATC.................... 21 1 4.00 4.00 0.00 0.00 .........................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 4.00 0.00 0.00 4.00 .........................................................TCACTGGGCTTTGTTTATCACA................... 22 1 4.00 0.00 0.00 4.00 .........................................................TCACTGCGCTTTGTTTATCTCA................... 22 1 3.00 1.00 0.00 2.00 .........................................................ACACTGGGCTTTGTTTATCTCA................... 22 1 3.00 1.00 0.00 2.00 .........................................................TCACTxGGCTTTGTTTATCTCA................... 21 1 3.00 0.00 0.00 3.00 .........................................................TCATTGGGCTTTGTTTATCTCA................... 22 1 3.00 1.00 0.00 2.00 .........................................................TCACTGGGCTTTGTTCATCTCA................... 22 1 3.00 2.00 0.00 1.00 ...........................................................ACTGGGCTTTGTTTATCTC.................... 19 1 3.00 1.00 0.00 2.00 .........................................................TCACTGGGCTTTGTTTATCTCG................... 22 1 3.00 0.00 0.00 3.00 .........................................................TCACTGGGCTTTGTTTATCTCC................... 22 1 3.00 1.00 0.00 2.00 .........................................................TCCCTGGGCTTTGTTTATCTCA................... 22 1 3.00 3.00 0.00 0.00 .........................................................GCACTGGGCTTTGTTTATCTCA................... 22 1 3.00 0.00 0.00 3.00 .........................................................TCACTGAGCTTTGTTTATCTC.................... 21 1 3.00 0.00 0.00 3.00 .........................................................TCACTGTGCTTTGTTTATCTCA................... 22 1 3.00 0.00 0.00 3.00 ........................................................CTCACTGGGCTTTGTTTATCTCA................... 23 1 3.00 1.00 0.00 2.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3R:10262524-10262621 +	93.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCCTCCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCGCACTACAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 2538.00 1.00 208.00 328.00 297.00 1704.00 .........................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 1004.00 0.00 21.00 37.00 36.00 910.00 .........................................................TCACTGGGCTTTGTTTATCT..................... 20 1 46.00 0.00 8.00 7.00 4.00 27.00 .........................................................TCACTGGGCTTTGTTTATCTCG................... 22 1 24.00 0.00 0.00 0.00 0.00 24.00 .........................................................TCACTGGGCTTTGTTTATC...................... 19 1 11.00 0.00 0.00 0.00 0.00 11.00 ...........................................................ACTGGGCTTTGTTTATCTCA................... 20 1 10.00 0.00 3.00 2.00 3.00 2.00 .........................................................TCACTGGGCTTTGTTTATCTCC................... 22 1 9.00 0.00 2.00 0.00 7.00 0.00 .........................................................TCACTGGGCTTTGTTTCTCTCA................... 22 1 7.00 0.00 4.00 0.00 3.00 0.00 .........................................................TCACTGGGCTTTGTTTATCC..................... 20 1 6.00 0.00 0.00 0.00 0.00 6.00 .........................................................TCACTGGGCTTTGTTTACCTCA................... 22 1 4.00 0.00 1.00 1.00 2.00 0.00 .........................................................TCACTGGGCTTTGTTTATCTCAT.................. 23 1 4.00 0.00 0.00 0.00 0.00 4.00 .........................................................TCACGGGGCTTTGTTTATCTCA................... 22 1 4.00 0.00 0.00 0.00 3.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 4.00 0.00 0.00 0.00 4.00 0.00 .........................................................CCACTGGGCTTTGTTTATCTC.................... 21 1 3.00 0.00 0.00 0.00 0.00 3.00 .........................................................TCACTGGACTTTGTTTATCTCA................... 22 1 3.00 0.00 0.00 0.00 2.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 1 3.00 0.00 0.00 1.00 2.00 0.00 .........................................................TCACTGGGCTTTGGTTATCTC.................... 21 1 3.00 0.00 0.00 0.00 1.00 2.00 .........................................................TCACCGGGCTTTGTTTATCTCA................... 22 1 3.00 0.00 0.00 1.00 0.00 2.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4770:15383893-15383990 -	95.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCCTCCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 23.00 2.00 2.00 0.00 19.00 .........................................................TCACTGGGCTTTGTTTATCT..................... 20 1 5.00 0.00 2.00 0.00 3.00 .........................................................TCACTTGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTAA................... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................TCACTAGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 .........................................................TCACTGGGCTTTGGTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000453800:2313678-2313775 +	89.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GATCCACGGTTTCAATTTATGGGATACACACAGTTCAGTTTTGTCACATTCCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCA Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409692:710233-710330 +	89.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GACCCCTGGTTTCAGTTTATGGGATACACACAGCTCAGTCTTGTCACATGTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302402:8322956-8323053 +	90.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCCCCCGGTTTCAGTTTATGGGATACACACAGTTCAGTCGTGTCGCATTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCA Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000415380:1406001-1406136 -	45.16	GTCC--TTC---------GGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA--------------------------- GTCCAGTTTAAGAAAAAGGATTTCAGTTTATGGGATATACACAGTTCAGTCTTGTCGCCTTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCAACAAGGGATATTTATTCAAACCCAAAA Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scf7180000490995:508430-508525 -	90.82	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GACTCTCGGTTTCAATTTATGGGATACACACAGTTCAGTCTTGTCACATTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGA--GAAATTTGTTCA Size Hit Count Total Norm

droRho1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000777158:16332-16429 -	90.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GGACCCCGGTTTCAATTTATGGGATACACACAGTTCAGTTTTGTCACATTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCA Size Hit Count Total Norm
3	scf7180000777285:69675-69710 -	17.69	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA ACCTTCTAA-----------------------------------------------GCCACTAGGCTTTA----CCCCAAAAAAACA----------- Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302475:1425888-1425985 +	77.04	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAG-----CATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA TGCCCCCGATTTCAATTTATGGGATACACACAGTTCAGTTTTGTCACATTTTTCGATCCTCATCACTGGGCTTTGTTTATCTCATAAAAGCGAAATTT----- Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scaffold_13340:867198-867296 -	84.24	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTT-CAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCCTCCGGTTTCAATTTGTGGGATACACACGGTTCAGTTGTGTCACTTTTGCGAGCATCACTGGGCTTTGTTTATCTCATAAGACTGAAATTTGTTCA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 17.00 4.00 8.00 3.00 2.00 ..........................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 7.00 2.00 4.00 1.00 0.00 ..........................................................TCACTGGGCTTTGTTTATCT..................... 20 1 7.00 3.00 4.00 0.00 0.00 ..........................................................TCACTGGGCTTCGTTTATCT..................... 20 1 1.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGCTTATCT..................... 20 1 1.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGCGCTTTGTTTATCTGA................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGTTTTTGTTTATCT..................... 20 1 1.00 0.00 0.00 1.00 0.00 ..........................................................TCACTGAGCTTTGTTTATCT..................... 20 1 1.00 0.00 1.00 0.00 0.00 ..........................................................TCACTGGGCTTTGTTTATC...................... 19 1 1.00 0.00 1.00 0.00 0.00 ..........................................................TCACTGGGATTTGTTTATCT..................... 20 1 1.00 0.00 0.00 1.00 0.00 ..........................................................TCACTGGGCTTTGTTTATCTAA................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................TCGCTGGGCTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGTTTCTCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00

droBip1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000394085:131950-132048 +	85.22	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTT-CAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCCTCCGGTTTCAAATTATGGGATACACACAGTTCAGTTTTGTCACTTTTGCGAACATCACTGGGCTTTGTTTATCTCATAAGACTGAAATTTGTTCA Size Hit Count Total Norm
4	scf7180000396691:1654647-1654730 -	42.42	GTCCTTCGGT-TTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA CTTCTTCGGACCACCGTTTC---GCTGCCCACCGCTTGGATTTTTT--------GGCATGATTGAAGCTTGATTATACCAAACAGACG----TTAATAG Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr2:7233334-7233438 -	75.76	G-------TCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA CGTGTGCCTCTTTTGGTTTCAATTTATGGGATGCACCAAGTTCAGTTTTGTCACATTTCGAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTGATTCA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ................................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 106.00 67.00 10.00 12.00 17.00 ................................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 36.00 16.00 1.00 4.00 15.00 ................................................................TCACTGGGCTTTGTTTATCT..................... 20 1 21.00 17.00 0.00 2.00 2.00 ..................................................................ACTGGGCTTTGTTTATCTCA................... 20 1 2.00 1.00 1.00 0.00 0.00 ................................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 2.00 0.00 0.00 0.00 2.00 ................................................................TCTCTGGGCTTTGTTTATCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ................................................................TCTCTGGGCTTTGTTTATCTCT................... 22 1 1.00 0.00 1.00 0.00 0.00 ................................................................TCACTGGGCTTTGTTTCTCA..................... 20 1 1.00 1.00 0.00 0.00 0.00 ................................................................TCGCTGGGCTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 .................................................................CACTGGGCTTTGTTTATCTCA................... 21 1 1.00 0.00 0.00 1.00 0.00 ................................................................TCACTGGGCxTTGTTTATCTCA................... 21 1 1.00 1.00 0.00 0.00 0.00 ................................................................TCACTGGGTTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ...............................................................CTCACTGGGCTTTGTTTATCTC.................... 22 1 1.00 0.00 0.00 0.00 1.00

droPer1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	super_0:1094016-1094113 -	86.96	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA CTCTTTTGGTTTCAATTTATGGGATGCACCAAGTTCAGTTTTGTCACATTTCGAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTGATTCA Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo .........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 74.00 6.00 0.00 14.00 15.00 39.00 .........................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 33.00 8.00 0.00 5.00 8.00 12.00 .........................................................TCACTGGGCTTTGTTTATCT..................... 20 1 15.00 5.00 0.00 6.00 4.00 0.00 .........................................................TAACTGGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 0.00 1.00 0.00 .........................................................TCACTGGGCTTTCTTTATCTCA................... 22 1 1.00 0.00 0.00 0.00 0.00 1.00 ................................GTTCAGTTTTGTCGCTTTT............................................... 19 1 1.00 0.00 0.00 0.00 1.00 0.00 .........................................................TCACTGGGCTTTGTTTAACTCA................... 22 1 1.00 0.00 0.00 0.00 0.00 1.00 .........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 1 1.00 0.00 0.00 1.00 0.00 0.00 .........................................................TCACTGGGTTTTGTTTATCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 .........................................................TCACTGGGCGTTGTTTTTCTC.................... 21 1 1.00 0.00 0.00 0.00 1.00 0.00 .........................................................ACGCTGGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 0.00 1.00 0.00

droWil1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scaffold_181108:652-751 +	78.72	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTC--AAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTCAGACGGTTTCAATTTATGGGATACACCAAGTTCAGTTTTGTCGCATTCCACGAGCATCACTGGGCTTTGTTTATCTCATAAAGGAGAAATGAATACA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ...........................................................TCACTGGGCTTTGTTTATCTCA................... 22 2 3551.50 90.00 23.50 10.50 3427.50 ...........................................................TCACTGGGCTTTGTTTATCTC.................... 21 2 1126.50 18.00 1.00 7.00 1100.50 ...........................................................TCACTGGGCTTTGTTTATCTCAT.................. 23 2 49.50 0.00 0.00 0.00 49.50 ...........................................................TCACTGGGCTTTGTTTATCTCG................... 22 2 37.00 0.00 0.00 0.00 37.00 ...........................................................TCACTGGGCTTTGTTTATCT..................... 20 2 17.50 6.50 0.00 2.00 9.00 ...........................................................TCACTGGGCTTTATTTATCTCA................... 22 2 6.00 0.00 0.00 0.00 6.00 ...........................................................TCACTGGGCTTTCTTTATCTCA................... 22 2 4.50 0.00 0.00 0.00 4.50 ...........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 2 4.50 0.00 0.50 0.00 4.00 ...........................................................TCACTGGGCTTTATTTATCTC.................... 21 2 4.00 0.00 0.00 0.00 4.00 ...........................................................TCACTGGGCCTTGTTTATCTCA................... 22 2 4.00 0.00 0.00 0.00 4.00 ...........................................................TCACTGGGCTTTGTTTATC...................... 19 2 4.00 0.00 0.00 0.00 4.00 .............................................................ACTGGGCTTTGTTTATCTCA................... 20 2 4.00 1.00 0.00 0.50 2.50 ...........................................................TCACTGGGCTTTGGTTATCTCA................... 22 2 3.50 0.00 0.00 0.00 3.50 ...........................................................TCACTGGGCTTTTTTTATCTC.................... 21 2 3.50 0.00 0.00 0.00 3.50 ...........................................................TCACTGGGCTTTGTTTATCCCA................... 22 2 3.00 0.50 0.00 0.00 2.50 ...........................................................TCACTGGGCTTTGTTTATCTCAC.................. 23 2 2.50 0.00 0.00 0.00 2.50 ...........................................................TCACTGGGCTTTGCTTATCTCA................... 22 2 2.50 0.00 0.00 0.00 2.50 ...........................................................TCACTGGGCCTTGTTTATCTC.................... 21 2 2.00 0.00 0.00 0.00 2.00 ...........................................................TCACTGGGCTTTGTCTATCTCA................... 22 2 2.00 0.00 0.00 0.00 2.00 ...........................................................TCACTGGGCTTTGTTTACCTCA................... 22 2 2.00 0.50 0.00 0.00 1.50 ...........................................................TCACTGGGGTTTGTTTATCTCA................... 22 2 2.00 0.00 0.00 0.00 2.00 ...........................................................TCACTGGGCTTTTTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 ...........................................................CCACTGGGCTTTGTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTTTGTTTATCTCT................... 22 2 1.50 0.00 0.00 0.00 1.50 .............................................................ACTGGGCTTTGTTTATCTCATT................. 22 2 1.50 0.00 0.50 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTATCCC.................... 21 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTCTGTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTTTGTTTATCTCATT................. 24 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCCCTGGGCTTTGTTTATCTCA................... 22 2 1.50 1.50 0.00 0.00 0.00 ...........................................................TCACCGGGCTTTGTTTATCTC.................... 21 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTTTGCTTATCTC.................... 21 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGTTTTGTTTATCTCA................... 22 2 1.50 0.00 0.50 0.00 1.00 ...........................................................TCACTGGGCGTTGTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 .............................................................ACTGGGCTTTGTTTATCTC.................... 19 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TTACTGGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTGTCTCA................... 22 2 1.00 0.00 0.50 0.00 0.50 ...........................................................TCACTGGGCTTTxTTTATCTCA................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTTGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACAGGGCTTTGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTATCTTA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCGCTGGGCTTTGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTxTTTATCTC.................... 20 2 1.00 0.00 0.00 0.00 1.00 ...........................................................ACACTGGGCTTTGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCGCTGGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTCGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ............................................................CACTGGGCTTTGTTTATCTCA................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACCGGGCTTTGTTTATCTCA................... 22 2 1.00 0.50 0.00 0.00 0.50 ...........................................................TCACTCGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTATCTCC................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTCTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTGATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGTCTTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTAGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTATTTATCAC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATTTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGAGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGTTTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGATTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACGGGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTGGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATTTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTTGGCCTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTCATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTAACTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCTCACT................. 24 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCTCACC................. 24 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGACTTTGTTTATCT..................... 20 2 0.50 0.00 0.00 0.50 0.00 ...........................................................TCACTGGGATTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCACA................... 22 2 0.50 0.00 0.00 0.00 0.50 ..........................................................CTCACTGGGCTTTGTTTATCTCA................... 23 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCATTGGGCTTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCCTTTTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATGTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTATATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTCGGCTTTGTTTATCTCAT.................. 23 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGGTTTGTTTATC...................... 19 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGTTTTGTTTATCTT.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCATTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCTCTGGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TTACTGGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGxTTATCTC.................... 20 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCATTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCxTTGTTTATCTCA................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCTGA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTxGGCTTTGTTTATCTC.................... 20 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTCATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTxTCT..................... 19 4 0.25 0.25 0.00 0.00 0.00 .............AATTTAGGGGGTACACCA..................................................................... 18 2 0.50 0.00 0.50 0.00 0.00
10	scaffold_181089:74237-74336 -	76.8	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTTC--AAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GCCAGACGGTTTCAATTTATGGGATACACCAAGTTCAGTTTTGTCGCATTCCACGAGCATCACTGGGCTTTGTTTATCTCATAGAGGAGAAATGAATACA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ...........................................................TCACTGGGCTTTGTTTATCTCA................... 22 2 3551.50 90.00 23.50 10.50 3427.50 ...........................................................TCACTGGGCTTTGTTTATCTC.................... 21 2 1126.50 18.00 1.00 7.00 1100.50 ...........................................................TCACTGGGCTTTGTTTATCTCAT.................. 23 2 49.50 0.00 0.00 0.00 49.50 ...........................................................TCACTGGGCTTTGTTTATCTCG................... 22 2 37.00 0.00 0.00 0.00 37.00 ...........................................................TCACTGGGCTTTGTTTATCT..................... 20 2 17.50 6.50 0.00 2.00 9.00 ...........................................................TCACTGGGCTTTATTTATCTCA................... 22 2 6.00 0.00 0.00 0.00 6.00 ...........................................................TCACTGGGCTTTCTTTATCTCA................... 22 2 4.50 0.00 0.00 0.00 4.50 ...........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 2 4.50 0.00 0.50 0.00 4.00 ...........................................................TCACTGGGCTTTATTTATCTC.................... 21 2 4.00 0.00 0.00 0.00 4.00 ...........................................................TCACTGGGCCTTGTTTATCTCA................... 22 2 4.00 0.00 0.00 0.00 4.00 ...........................................................TCACTGGGCTTTGTTTATC...................... 19 2 4.00 0.00 0.00 0.00 4.00 .............................................................ACTGGGCTTTGTTTATCTCA................... 20 2 4.00 1.00 0.00 0.50 2.50 ...........................................................TCACTGGGCTTTGGTTATCTCA................... 22 2 3.50 0.00 0.00 0.00 3.50 ...........................................................TCACTGGGCTTTTTTTATCTC.................... 21 2 3.50 0.00 0.00 0.00 3.50 ...........................................................TCACTGGGCTTTGTTTATCCCA................... 22 2 3.00 0.50 0.00 0.00 2.50 ...........................................................TCACTGGGCTTTGTTTATCTCAC.................. 23 2 2.50 0.00 0.00 0.00 2.50 ...........................................................TCACTGGGCTTTGCTTATCTCA................... 22 2 2.50 0.00 0.00 0.00 2.50 ...........................................................TCACTGGGCCTTGTTTATCTC.................... 21 2 2.00 0.00 0.00 0.00 2.00 ...........................................................TCACTGGGCTTTGTCTATCTCA................... 22 2 2.00 0.00 0.00 0.00 2.00 ...........................................................TCACTGGGCTTTGTTTACCTCA................... 22 2 2.00 0.50 0.00 0.00 1.50 ...........................................................TCACTGGGGTTTGTTTATCTCA................... 22 2 2.00 0.00 0.00 0.00 2.00 ...........................................................TCACTGGGCTTTTTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 ...........................................................CCACTGGGCTTTGTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTTTGTTTATCTCT................... 22 2 1.50 0.00 0.00 0.00 1.50 .............................................................ACTGGGCTTTGTTTATCTCATT................. 22 2 1.50 0.00 0.50 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTATCCC.................... 21 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTCTGTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTTTGTTTATCTCATT................. 24 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCCCTGGGCTTTGTTTATCTCA................... 22 2 1.50 1.50 0.00 0.00 0.00 ...........................................................TCACCGGGCTTTGTTTATCTC.................... 21 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGCTTTGCTTATCTC.................... 21 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TCACTGGGTTTTGTTTATCTCA................... 22 2 1.50 0.00 0.50 0.00 1.00 ...........................................................TCACTGGGCGTTGTTTATCTCA................... 22 2 1.50 0.00 0.00 0.00 1.50 .............................................................ACTGGGCTTTGTTTATCTC.................... 19 2 1.50 0.00 0.00 0.00 1.50 ...........................................................TTACTGGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTGTCTCA................... 22 2 1.00 0.00 0.50 0.00 0.50 ...........................................................TCACTGGGCTTTxTTTATCTCA................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTTGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACAGGGCTTTGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTATCTTA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCGCTGGGCTTTGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTxTTTATCTC.................... 20 2 1.00 0.00 0.00 0.00 1.00 ...........................................................ACACTGGGCTTTGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCGCTGGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTCGTTTATCTCA................... 22 2 1.00 0.00 0.00 0.00 1.00 ............................................................CACTGGGCTTTGTTTATCTCA................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACCGGGCTTTGTTTATCTCA................... 22 2 1.00 0.50 0.00 0.00 0.50 ...........................................................TCACTCGGCTTTGTTTATCTC.................... 21 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTGTTTATCTCC................... 22 2 1.00 0.00 0.00 0.00 1.00 ...........................................................TCACTGGGCTTTCTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTGATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGTCTTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTAGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTATTTATCAC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATTTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGAGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGTTTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGATTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACGGGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTGGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATTTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTTGGCCTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTCATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTAACTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCTCACT................. 24 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCTCACC................. 24 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGACTTTGTTTATCT..................... 20 2 0.50 0.00 0.00 0.50 0.00 ...........................................................TCACTGGGATTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCACA................... 22 2 0.50 0.00 0.00 0.00 0.50 ..........................................................CTCACTGGGCTTTGTTTATCTCA................... 23 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCATTGGGCTTTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCCTTTTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATGTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTATATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTCGGCTTTGTTTATCTCAT.................. 23 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGGTTTGTTTATC...................... 19 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGTTTTGTTTATCTT.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCATTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCTCTGGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TTACTGGGCTTTGTTTATCTCA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGxTTATCTC.................... 20 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCATTGTTTATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCxTTGTTTATCTCA................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTATCTGA................... 22 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTxGGCTTTGTTTATCTC.................... 20 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTCATCTC.................... 21 2 0.50 0.00 0.00 0.00 0.50 ...........................................................TCACTGGGCTTTGTTTxTCT..................... 19 4 0.25 0.25 0.00 0.00 0.00 .............AATTTAGGGGGTACACCA..................................................................... 18 2 0.50 0.00 0.50 0.00 0.00
2	scaffold_181089:1480166-1480280 +	42.45	GTCCTTCGGTTTCAGTTTA-----------------TGGGATACACACAGTTCAGTTTTGTCACACTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAA---ATTTATTCA AATTTTCGCTTTTTGTTTTGGCTCTACTGTTCTCGCTGCTGCACTTACACTTTGCTTTTTTCGCT-TTCGTTCGACACTGGGCTTTCTTTTACATTTTAG--TTAAGCCATTTATTTA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head

droVir3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_13047:1194317-1194415 +	81.3	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACACTT-CAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA TGATTTGGATTTCAATTTATGGGATACACCAAGTTCAGTTTTGTCAGATGTCCAAGCATCACTGGGCTTTGTTTATCTCATAAGAGTGAAATTTGTTCA Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ..........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 653.00 11.00 93.00 4.00 43.00 502.00 ..........................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 545.00 2.00 17.00 0.00 41.00 485.00 ..........................................................TCACTGGGCTTTGTTTATCT..................... 20 1 41.00 3.00 11.00 1.00 4.00 22.00 ..........................................................TCACTGGGCTTTGTTTATC...................... 19 1 16.00 0.00 2.00 0.00 1.00 13.00 ..........................................................TCACTGGGCTTTGTTTATCTCG................... 22 1 13.00 0.00 0.00 0.00 0.00 13.00 ..........................................................TCACTGGGCTTTGTTTATCTCAT.................. 23 1 6.00 0.00 0.00 0.00 0.00 6.00 ..........................................................CCACTGGGCTTTGTTTATCTC.................... 21 1 3.00 0.00 1.00 0.00 0.00 2.00 ..........................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 3.00 0.00 0.00 0.00 1.00 2.00 ..........................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 1 3.00 2.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGGGCTTTGTTTATCTCC................... 22 1 3.00 0.00 0.00 0.00 2.00 1.00 ..........................................................TCACTGGGCTTTGCTTATCTCA................... 22 1 2.00 0.00 0.00 0.00 0.00 2.00 ..........................................................TCACTGGGCCTTGTTTATCTCA................... 22 1 2.00 0.00 2.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGTTTATCTAA................... 22 1 2.00 0.00 1.00 0.00 0.00 1.00 ............................................................ACTGGGCTTTGTTTATCTC.................... 19 1 1.00 0.00 1.00 0.00 0.00 0.00 .........................................................CTCACTGGGCTTTGTTTATCTCA................... 23 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTGTTTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGCGCTTTGATTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGTTTTTCTC.................... 21 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGGGCGATGTTTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACCGGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 0.00 0.00 1.00 ........................................................TCTCACTGGGCTTTGTTTATCTCA................... 24 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTTTTTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGTTTATCC..................... 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGGGCGTTGTTTAGCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGCTTATCT..................... 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGGGCTTTGTTTATCG..................... 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGGGCTTTGCTTATCTC.................... 21 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGCGCTTTGTTTCTCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGTTTATCTT.................... 21 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTAGGCTTTGTTTATC...................... 19 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGGGCTTTGGTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGTTTTGTTTATCTC.................... 21 1 1.00 0.00 0.00 0.00 0.00 1.00 ..........................................................TCACTGGGCTTTGTGTTTCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................CCACTGGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTATTTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ..........................................................TCACTGGGCTTTGTTTATCCCA................... 22 1 1.00 0.00 0.00 1.00 0.00 0.00 ..........................................................TCACTGGGCGTTGTTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00

droMoj3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_6540:5225327-5225427 +	80.93	GTCCTTC--GGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACA-CTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GTGATTAAGGATTTCAATTTATGGGATACACTAAGTTCAGTTTTGTCAGATGTCCAAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTTGTTCA Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ............................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 1063.00 901.00 88.00 67.00 7.00 ............................................................TCACTGGGCTTTGTTTATCTC.................... 21 1 208.00 157.00 23.00 28.00 0.00 ............................................................TCACTGGGCTTTGTTTATCT..................... 20 1 163.00 97.00 29.00 37.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCAT.................. 23 1 22.00 17.00 2.00 3.00 0.00 ............................................................TCACTGGGCTTTGTTTATC...................... 19 1 7.00 3.00 3.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 6.00 4.00 1.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCAA.................. 23 1 5.00 4.00 1.00 0.00 0.00 ............................................................TCACTGGGATTTGTTTATCTCA................... 22 1 3.00 1.00 1.00 1.00 0.00 ............................................................TCACTGGGCTTTGTCTATCTCA................... 22 1 2.00 1.00 0.00 0.00 1.00 ............................................................TCACTGGGCTTTGTTTGTCTCA................... 22 1 2.00 1.00 1.00 0.00 0.00 ............................................................TCACTGGGCTTTGCTTATCTCA................... 22 1 2.00 2.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTACCTCA................... 22 1 2.00 1.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCC................... 22 1 2.00 0.00 0.00 1.00 1.00 ............................................................TCACTGTGCTTTGTTTATCTCA................... 22 1 2.00 1.00 1.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCG................... 22 1 2.00 2.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTAT....................... 18 1 2.00 1.00 1.00 0.00 0.00 ............................................................TCACTGGGCTTTGCTTATCT..................... 20 1 2.00 0.00 1.00 1.00 0.00 ............................................................TCGCTGGGCTTTGTTTATCTCA................... 22 1 2.00 1.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTCTCT..................... 20 1 2.00 0.00 0.00 2.00 0.00 ............................................................TCACTAGGCTTTGTTTATCAC.................... 21 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATATC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTTTCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGAGCTTTGTTTCTCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTTTCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................GCACTGGGCTTTGTTTATCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCAGTGGGCTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCAATGGGCTTAGTTTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 ............................................................TCACTCGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGTGCTTTGTTTATCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TTACTGGGCTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ...........................................................CTCACTGGGCTTTGTTTATCTCA................... 23 1 1.00 0.00 1.00 0.00 0.00 ............................................................TCACTGGGCTTTGxTTATCTC.................... 20 1 1.00 1.00 0.00 0.00 0.00 ............................................................ACACTGGGCTTTGTTTATCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCATT................. 24 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTxTTTATC...................... 18 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACCGGGCTTTGTTTATCTC.................... 21 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCGTTGTTTAGCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTATAT..................... 20 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCAAA................. 24 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTATCCCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGTCTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCCTTGTTTATCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACGGGGCTTTGTTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 ............................................................CCACTGGGCTTTGTTTATCT..................... 20 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTATATCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTCGGCTTTGTTTATCT..................... 20 1 1.00 0.00 0.00 1.00 0.00 ..............................................................ACTGGGCTTTGTTTATCTCA................... 20 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTATCCA.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGATTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 ............................................................TCACTGGGCTCTGTTTATCT..................... 20 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTTGGCTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTCGGCTGTGTTTATCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTTTTTATCTC.................... 21 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTCGTTTGTCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 ............................................................TCAATGGGCTTTGTTTATCT..................... 20 1 1.00 0.00 0.00 1.00 0.00 ............................................................TAACTGGGCTTTGTTTATCTCA................... 22 1 1.00 0.00 1.00 0.00 0.00 ............................................................TCACTGCCCTTTGTTTATCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTTA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................CCACTGGGCTTTGTTTATCTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTTTTTATCTTA................... 22 1 1.00 0.00 0.00 1.00 0.00 ............................................................GCACTGGGCTTTGTTTATCT..................... 20 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTCTCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 ..............................................................ACTGGGCTTTGTTTATCTCATT................. 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTAA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTCTGTTTATCTCA................... 22 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATGTCA................... 22 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTCGGCTTTGTTTATCTC.................... 21 1 1.00 0.00 1.00 0.00 0.00 .............................................TCAGATGTCCAAGCATCACTGGGC................................ 24 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCxTTGTTTATCTCA................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCAATGGGCTTTGTTTATCTC.................... 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCTTTGCTTATCTCC................... 22 1 1.00 0.00 0.00 1.00 0.00 ............................................................TCACTGGGCTTTGTTTATCTCAAT................. 24 1 1.00 1.00 0.00 0.00 0.00 ............................................................TCACTGGGCGTTGTTTATCT..................... 20 1 1.00 0.00 0.00 1.00 0.00

droGri2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_14906:5077291-5077389 -	81.3	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACA-CTTCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA GATTTCGGATTTCAATTTATGGGATACACCAAGTTCAGTTTTGTCAGATGTCCAAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTAGTTCA Size Hit Count Total Norm V109 Male body ..........................................................TCACTGGGCTTTGTTTATCTCA................... 22 1 2.00 2.00 ..........................................................TCACTGGGCTTTGTTTATCTCT................... 22 1 1.00 1.00
3	scaffold_15110:16073543-16073642 -	53.13	GTCCTTCGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTG--------TCACACTTCAAGCATCACTGG-GCTTTGTTTATCTCA---TGAGAGCGAAATT---TATTCA T---------TTGACCTTCTGGCATTCATAT---TCATATCTGTGCGTGATTTTCACTCCAAT-TTCAATGGTTATTTGTATATCTCACTCTCAGAGCGCATTTCTCAATTCC Size Hit Count Total Norm V109 Male body

Generated: 04/20/2012 at 05:35:10 EDT