Possible Orthologs for dme-mir-314

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chr3L:11131600-11131719 +	95.06	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAGTCCCGTGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ....................................................................................TATTCGAGCCAATAAGTTCGGA.............. 22 1 1038.00 164.00 5.00 616.00 253.00 ....................................................................................TATTCGAGCCAATAAGTTCGG............... 21 1 1003.00 553.00 4.00 301.00 145.00 ....................................................................................TATTCGAGCCAATAAGTTCGGT.............. 22 1 555.00 189.00 1.00 279.00 86.00 ....................................................................................TATTCGAGCCAATAAGTTCGT............... 21 1 368.00 10.00 5.00 200.00 153.00 .................GTAACTTGTGTGGCTTCGAATGTACC............................................................................. 26 1 348.00 17.00 2.00 85.00 244.00 ....................................................................................TATTCGAGCCAATAAGTTCGGC.............. 22 1 250.00 85.00 2.00 90.00 73.00 ....................................................................................TATTCGAGCCAATAAGTTCGGG.............. 22 1 177.00 1.00 0.00 140.00 36.00 ....................................................................................TATTCGAGCCAATAAGTTCG................ 20 1 162.00 21.00 2.00 135.00 4.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAT............. 23 1 75.00 1.00 0.00 65.00 9.00 ..................TAACTTGTGTGGCTTCGAATGTACC............................................................................. 25 1 74.00 0.00 1.00 37.00 36.00 ........................................................GTCCCGTGTCGGATTTTGTTACCT........................................ 24 1 58.00 0.00 0.00 25.00 33.00 ....................................................................................TATTCTAGCCAATAAGTTCGT............... 21 1 52.00 0.00 0.00 36.00 16.00 ....................................................................................TATTCGAGCCAATAAGTTCGTT.............. 22 1 38.00 6.00 1.00 17.00 14.00 ....................................................................................TATTCTAGCCAATAAGTTCGGA.............. 22 1 37.00 0.00 1.00 18.00 18.00 ....................................................................................TATTCGATCCAATAAGTTCGGA.............. 22 1 36.00 0.00 0.00 14.00 22.00 ....................................................................................TATTCGAGCCAATAAGTTC................. 19 1 31.00 2.00 0.00 27.00 2.00 ....................................................................................TATTCGACCCAATAAGTTCGGA.............. 22 1 28.00 0.00 0.00 14.00 14.00 ..........................................................CCCGTGTCGGATTTTGTTACCTCTGG.................................... 26 1 24.00 0.00 0.00 3.00 21.00 ....................................................................................TATTCCAGCCAATAAGTTCGT............... 21 1 20.00 0.00 0.00 13.00 7.00 ....................................................................................TATTCGATCCAATAAGTTCGGT.............. 22 1 20.00 0.00 0.00 15.00 5.00 .................GTAACTTGTGTGGCTTCGAATGTAC.............................................................................. 25 1 20.00 1.00 0.00 2.00 17.00 ..........................................................CCCGTGTCGGATTTTGTTACCT........................................ 22 1 19.00 0.00 0.00 5.00 14.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTT............. 23 1 16.00 0.00 0.00 15.00 1.00 .............................................................................................CAATAAGTTCGGCCACGA......... 18 1 14.00 4.00 0.00 6.00 4.00 ....................................................................................TATTCCAGCCAATAAGTTCGGA.............. 22 1 14.00 0.00 0.00 4.00 10.00 ....................................................................................TATTCGAGCCAATAATTTCGT............... 21 1 14.00 0.00 0.00 1.00 13.00 ....................................................................................TATTCGAGCCAATAAGTTCGC............... 21 1 14.00 1.00 0.00 7.00 6.00 ....................................................................................TATTCGAGCCAATAAGTTCGA............... 21 1 14.00 13.00 0.00 1.00 0.00 ........................................................................................CGAGCCAATAAGTTCGGA.............. 18 1 13.00 1.00 0.00 7.00 5.00 ....................................................................................TATTCGATCCAATAAGTTCGGC.............. 22 1 13.00 0.00 0.00 5.00 8.00 ........................................................GTCCCGTGTCGGATTTTGTTACCTCTGGT................................... 29 1 12.00 1.00 0.00 7.00 4.00 ....................................................................................TATTCGAGCCAATAATTTCGGA.............. 22 1 12.00 0.00 0.00 8.00 4.00 ..........................................................CCCGTGTCGGATTTTGTTAC.......................................... 20 1 12.00 1.00 0.00 6.00 5.00 ............................................................CGTGTCGGATTTTGTTACCTCTGG.................................... 24 1 12.00 0.00 0.00 0.00 12.00 ....................................................................................TATTCTAGCCAATAAGTTCGG............... 21 1 11.00 0.00 0.00 4.00 7.00 ....................................................................................TATTCTAGCCAATAAGTTCGGT.............. 22 1 10.00 0.00 0.00 7.00 3.00 ..............................................................TGTCGGATTTTGTTACCTCTGG.................................... 22 1 10.00 1.00 0.00 0.00 9.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTA............. 23 1 10.00 9.00 0.00 1.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCGT............... 21 1 10.00 0.00 0.00 5.00 5.00 ....................................................................................TATTCCAGCCAATAAGTTCGG............... 21 1 10.00 0.00 0.00 3.00 7.00 ................CGTAACTTGTGTGGCTTCGAATGTACC............................................................................. 27 1 10.00 0.00 0.00 1.00 9.00 ....................................................................................TATTCGAGCCAATAAGTTCGTA.............. 22 1 9.00 7.00 0.00 1.00 1.00 ....................................................................................TATTCGACCCAATAAGTTCGT............... 21 1 9.00 0.00 0.00 2.00 7.00 ....................................................................................TATTCxAGCCAATAAGTTCGGA.............. 21 1 8.00 0.00 0.00 4.00 4.00 ......................TTGTGTGGCTTCGAATGTACC............................................................................. 21 1 8.00 0.00 0.00 2.00 6.00 ....................................................................................TATTCGACCCAATAAGTTCGGT.............. 22 1 8.00 0.00 0.00 8.00 0.00 ...........................................................CCGTGTCGGATTTTGTTACCT........................................ 21 1 8.00 0.00 0.00 1.00 7.00 ....................................................................................TATTCGAGCCAATAAGTT.................. 18 1 8.00 2.00 0.00 5.00 1.00 ....................................................................................TATTCGAGCCCATAAGTTCGG............... 21 1 7.00 7.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAA............. 23 1 7.00 1.00 0.00 6.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGG............... 21 1 7.00 0.00 0.00 6.00 1.00 ..........................................................CCCGTGTCGGATTTTGTTACC......................................... 21 1 7.00 0.00 0.00 1.00 6.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCT............. 23 1 7.00 2.00 0.00 3.00 2.00 ........................................................GTCCCGTGTCGGATTTTGTTACCTCTGG.................................... 28 1 7.00 1.00 0.00 2.00 4.00 ....................................................................................TATTCGAGCCAATAAGTTCGTC.............. 22 1 6.00 1.00 0.00 2.00 3.00 ....................................................................................TATTCGAGCCAATAAGGTCGG............... 21 1 6.00 3.00 0.00 1.00 2.00 ....................................................................................TATTCxAGCCAATAAGTTCGT............... 20 1 6.00 0.00 0.00 3.00 3.00 .................GTAACTTGTGTGGCTTCGAATGTACCT............................................................................ 27 1 6.00 1.00 0.00 0.00 5.00 ....................................ATGTACCTAGTTGAGGAAAA................................................................ 20 1 6.00 5.00 0.00 0.00 1.00 ....................................................................................TATTCGAxCCAATAAGTTCGGC.............. 21 1 6.00 0.00 0.00 0.00 6.00 ....................................................................................TATTCGACCCAATAAGTTCGGG.............. 22 1 6.00 0.00 0.00 3.00 3.00 ........................................................GTCCCGTGTCGGATTTTGTTACCTCTG..................................... 27 1 6.00 0.00 0.00 1.00 5.00 ....................................................................................TATTCGAGCCAATCAGTTCGG............... 21 1 5.00 5.00 0.00 0.00 0.00 .......................................................AGTCCCGTGTCGGATTTTGTTACCTC....................................... 26 1 5.00 0.00 0.00 0.00 5.00 ..........................................................CCCGTGTCGGATTTTGTTACCTCTG..................................... 25 1 5.00 0.00 0.00 0.00 5.00 ....................................................................................TATTCGAGCCAATAAGTTCGAC.............. 22 1 5.00 0.00 0.00 3.00 2.00 ........................................................GTCCCGTGTCGGATTTTGTTACCG........................................ 24 1 5.00 0.00 0.00 2.00 3.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAC............. 23 1 5.00 0.00 0.00 2.00 3.00 .....................................................................................ATTCGAGCCAATAAGTTCGGA.............. 21 1 5.00 1.00 0.00 4.00 0.00 ....................................................AAAAGTCCCGTGTCGGATT................................................. 19 1 5.00 0.00 0.00 1.00 4.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCC............. 23 1 5.00 1.00 0.00 0.00 4.00 ....................................................................................TATTCGACCCAATAAGTTCGGC.............. 22 1 5.00 0.00 0.00 4.00 1.00 ........................................................GTCCCGTGTCGGATTTTGTTACC......................................... 23 1 4.00 0.00 0.00 2.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCA............. 23 1 4.00 3.00 0.00 1.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCGGG.............. 22 1 4.00 0.00 0.00 2.00 2.00 ........................................................GTCCCGTGTCGGATTTTGTTACCTC....................................... 25 1 4.00 0.00 0.00 2.00 2.00 ....................................................................................TATTCGAGTCAATAAGTTCGGA.............. 22 1 4.00 2.00 0.00 2.00 0.00 ........................................................................TGTTACCTCTGGTATTCGAGC........................... 21 1 4.00 4.00 0.00 0.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCGGG.............. 22 1 4.00 0.00 0.00 2.00 2.00 .................TTAACTTGTGTGGCTTCGAATGTACC............................................................................. 26 1 4.00 0.00 0.00 1.00 3.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTC............. 23 1 4.00 0.00 0.00 4.00 0.00 ...................AACTTGTGTGGCTTCGAATGTACC............................................................................. 24 1 4.00 1.00 0.00 2.00 1.00 ........................................................GTCCCGTGTCGGATTTTGTTACCC........................................ 24 1 4.00 0.00 0.00 1.00 3.00 ....................................................................................TAxTCCAGCCAATAAGTTCGG............... 20 1 4.00 0.00 0.00 3.00 1.00 ....................................................................................TATTCGAGCCAATAACTTCGT............... 21 1 4.00 0.00 0.00 1.00 3.00 ....................................................................................TATTCGAGCCAATTAGTTCGGT.............. 22 1 4.00 4.00 0.00 0.00 0.00 ............................................................CGTGTCGGATTTTGTTACC......................................... 19 1 4.00 0.00 0.00 0.00 4.00 ..............................................TTGAGGAAAAGTCCCGTGTCGGATTTT............................................... 27 1 4.00 0.00 0.00 0.00 4.00 ..........................................................CCCGTGTCGGATTTTGTTACCC........................................ 22 1 3.00 0.00 0.00 1.00 2.00 ..........................................................................................AGCCAATAAGTTCGGAAA............ 18 1 3.00 0.00 0.00 0.00 3.00 .................GTAACTTGTGTGGCTTCGAATGTA............................................................................... 24 1 3.00 1.00 0.00 0.00 2.00 ..................TAACTTGTGTGGCTTCGAATGTAAC............................................................................. 25 1 3.00 0.00 0.00 2.00 1.00 ....................................................................................TATTCxAGCCAATAAGTTCGGT.............. 21 1 3.00 0.00 0.00 1.00 2.00 .................GTAACTTGTCTGGCTTCGAATGTACC............................................................................. 26 1 3.00 0.00 0.00 0.00 3.00 ....................................................................................TATTCGATCCAATAAGTTCGG............... 21 1 3.00 0.00 0.00 0.00 3.00 ....................................................................................TATTCGACCCAATAAGTTCGG............... 21 1 3.00 0.00 0.00 0.00 3.00 ..................................GAATGTACCTAGTTGAGGAAAA................................................................ 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................CCCGTGTCGGATTTTGTTACCTC....................................... 23 1 3.00 0.00 0.00 0.00 3.00 ...........................................................CCGTGTCGGATTTTGTTACCTCTGG.................................... 25 1 3.00 0.00 0.00 0.00 3.00 ..........................................CTAGTTGAGGAAAAGTCCCGTGTCGGATT................................................. 29 1 3.00 0.00 0.00 3.00 0.00 .................GTAACTTGTGTGGCTTCGAAT.................................................................................. 21 1 3.00 1.00 0.00 2.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:3951120-3951239 +	95.06	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAGTCCCGTGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ....................................................................................TATTCGAGCCAATAAGTTCGG............... 21 1 17573.00 11092.00 5410.00 1071.00 ....................................................................................TATTCGAGCCAATAAGTTCGGT.............. 22 1 10216.00 7654.00 2025.00 537.00 ....................................................................................TATTCGAGCCAATAAGTTCG................ 20 1 4626.00 4173.00 179.00 274.00 ....................................................................................TATTCGAGCCAATAAGTTCGGA.............. 22 1 3573.00 2124.00 1252.00 197.00 ....................................................................................TATTCGAGCCAATAAGTTCGGC.............. 22 1 1040.00 337.00 623.00 80.00 ....................................................................................TATTCGAGCCAATAAGTTCGTT.............. 22 1 558.00 467.00 65.00 26.00 ....................................................................................TATTCGAGCCAATAAGTTCGT............... 21 1 417.00 315.00 88.00 14.00 .................GTAACTTGTGTGGCTTCGAATGTACC............................................................................. 26 1 355.00 90.00 262.00 3.00 ....................................................................................TATTCGAGCCAATAAGTTCGA............... 21 1 255.00 186.00 56.00 13.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTT............. 23 1 149.00 127.00 15.00 7.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTA............. 23 1 142.00 84.00 50.00 8.00 ....................................................................................TATTCGAGCCAATAAGTTCGTA.............. 22 1 134.00 78.00 50.00 6.00 ....................................................................................TATTTGAGCCAATAAGTTCGG............... 21 1 123.00 22.00 100.00 1.00 .............................................................................................CAATAAGTTCGGCCACGA......... 18 1 118.00 1.00 116.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTTGG............... 21 1 109.00 70.00 39.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAGG............... 21 1 94.00 92.00 1.00 1.00 ....................................ATGTACCTAGTTGAGGAAAA................................................................ 20 1 93.00 23.00 68.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTAGGT.............. 22 1 66.00 65.00 0.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTTGGT.............. 22 1 65.00 51.00 14.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTAC.............................................................................. 25 1 55.00 25.00 28.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTAG................ 20 1 54.00 54.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGG............... 21 1 54.00 34.00 15.00 5.00 ....................................................................................TATTCGAGCCAATAAGTTC................. 19 1 53.00 22.00 9.00 22.00 ....................................................................................TATTCGAGCCAATAAGTTGGG............... 21 1 52.00 51.00 1.00 0.00 .................GTAACTTGTGTGGCTTCGA.................................................................................... 19 1 50.00 3.00 47.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAA............. 23 1 47.00 22.00 24.00 1.00 ....................................................................................TATTCGAGCCAATAAGTT.................. 18 1 46.00 8.00 32.00 6.00 ....................................................................................TATTCGAGCCAATAACTTCGG............... 21 1 45.00 8.00 36.00 1.00 ....................................................................................TATTCTAGCCAATAAGTTCGG............... 21 1 38.00 18.00 15.00 5.00 .................GTAACTTGTGTGGCTTCGAATG................................................................................. 22 1 37.00 25.00 9.00 3.00 ......................................GTACCTAGTTGAGGAAAA................................................................ 18 1 37.00 0.00 37.00 0.00 ....................................................................................TATTCGAGTCAATAAGTTCGG............... 21 1 35.00 5.00 28.00 2.00 ...................................AATGTACCTAGTTGAGGAAAA................................................................ 21 1 35.00 6.00 28.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTGG................ 20 1 34.00 32.00 2.00 0.00 .................GTAACTTGTGTGGCTTCGAAT.................................................................................. 21 1 34.00 10.00 23.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCA............. 23 1 30.00 6.00 24.00 0.00 ....................................................................................TATTCGAGCCAATACGTTCGG............... 21 1 30.00 23.00 6.00 1.00 .................GTAACTTGTGTGGCTTCGAATGT................................................................................ 23 1 29.00 23.00 5.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGC............... 21 1 29.00 19.00 9.00 1.00 ......................................................................................TTCGAGCCAATAAGTTCGG............... 19 1 26.00 4.00 21.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTTG................ 20 1 26.00 26.00 0.00 0.00 ....................................................................................TATTCGACCCAATAAGTTCGG............... 21 1 24.00 7.00 14.00 3.00 ..........................................................................TTACCTCTGGTATTCGAGC........................... 19 1 23.00 0.00 23.00 0.00 ........................................................................TGTTACCTCTGGTATTCGAGC........................... 21 1 23.00 4.00 18.00 1.00 .................GTAACTTGTGTGGCTTCGAA................................................................................... 20 1 23.00 4.00 19.00 0.00 ....................................................................................TACTCGAGCCAATAAGTTCGG............... 21 1 23.00 13.00 10.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTA............................................................................... 24 1 22.00 12.00 8.00 2.00 ....................................................................................TATTCGAGCCxATAAGTTCGG............... 20 1 22.00 7.00 15.00 0.00 ....................................................................................TATTCGTGCCAATAAGTTCGG............... 21 1 22.00 4.00 17.00 1.00 ....................................................................................TATTCGAGCCGATAAGTTCGG............... 21 1 21.00 16.00 5.00 0.00 ....................................................................................CATTCGAGCCAATAAGTTCGG............... 21 1 21.00 13.00 8.00 0.00 .....................................................................................ATTCGAGCCAATAAGTTCGG............... 20 1 20.00 12.00 6.00 2.00 ....................................................................................TATTCGAGCCCATAAGTTCGG............... 21 1 20.00 15.00 4.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGGG.............. 22 1 20.00 12.00 7.00 1.00 ....................................................................................TATTTGAGCCAATAAGTTCGGT.............. 22 1 19.00 3.00 16.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAGGA.............. 22 1 19.00 16.00 0.00 3.00 ......................................................................................TTCGAGCCAATAAGTTCGGT.............. 20 1 19.00 13.00 5.00 1.00 ....................................................................................TATTCGGGCCAATAAGTTCGG............... 21 1 19.00 5.00 12.00 2.00 ....................................................................................TATTCGAGCTAATAAGTTCGG............... 21 1 19.00 9.00 10.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTGGGT.............. 22 1 18.00 18.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTTGGA.............. 22 1 18.00 7.00 10.00 1.00 ....................................ATGTACCTAGTTGAGGAAAAGT.............................................................. 22 1 18.00 2.00 16.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGG............... 21 1 17.00 10.00 7.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCT............. 23 1 17.00 7.00 5.00 5.00 .....................................................................................ATTCGAGCCAATAAGTTCGGT.............. 21 1 16.00 13.00 3.00 0.00 ....................................................................................TATTCGAGCCAGTAAGTTCGG............... 21 1 16.00 6.00 9.00 1.00 ....................................................................................TATCCGAGCCAATAAGTTCGG............... 21 1 16.00 11.00 4.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCCG............... 21 1 16.00 11.00 2.00 3.00 ..................TAACTTGTGTGGCTTCGAATGTACC............................................................................. 25 1 16.00 12.00 3.00 1.00 ....................................................................................TATTCGAGCTAATAAGTTCGGT.............. 22 1 15.00 8.00 6.00 1.00 ....................................................................................TATTCAAGCCAATAAGTTCGG............... 21 1 15.00 9.00 4.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCAG............... 21 1 15.00 10.00 1.00 4.00 ....................................................................................TATTCGATCCAATAAGTTCGGT.............. 22 1 15.00 8.00 4.00 3.00 ....................................................................................TATCCGAGCCAATAAGTTCGGT.............. 22 1 15.00 12.00 2.00 1.00 ....................................................................................TATTCGAGCCAATAGGTTCGG............... 21 1 14.00 5.00 7.00 2.00 ....................................................................................TATTCGAGTCAATAAGTTCGGT.............. 22 1 14.00 1.00 13.00 0.00 ...................................................................................CTATTCGAGCCAATAAGTTCGG............... 22 1 14.00 5.00 8.00 1.00 ....................................................................................TATTCGAGCCxATAAGTTCGGT.............. 21 1 13.00 5.00 8.00 0.00 .......................................................................TTGTTACCTCTGGTATTCGAGC........................... 22 1 13.00 1.00 12.00 0.00 ...................................................................................CTATTCGAGCCAATAAGTTCGGT.............. 23 1 13.00 10.00 3.00 0.00 ....................................................................ATTTTGTTACCTCTGGTATTCGAGC........................... 25 1 13.00 0.00 13.00 0.00 ....................................................................................TATTCGACCCAATAAGTTCGGT.............. 22 1 13.00 5.00 5.00 3.00 ........................................ACCTAGTTGAGGAAAAGT.............................................................. 18 1 13.00 0.00 12.00 1.00 .....................................TGTACCTAGTTGAGGAAAA................................................................ 19 1 13.00 0.00 13.00 0.00 ....................................................................................GATTCGAGCCAATAAGTTCGG............... 21 1 13.00 2.00 11.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGGT.............. 22 1 12.00 10.00 2.00 0.00 ......................................................................TTTGTTACCTCTGGTATTCGAGC........................... 23 1 12.00 0.00 12.00 0.00 ....................................................................................TCTTCGAGCCAATAAGTTCGGT.............. 22 1 12.00 8.00 3.00 1.00 ....................................................................................TCTTCGAGCCAATAAGTTCGG............... 21 1 12.00 6.00 5.00 1.00 ........................................................................TGTTACCTCTGGTATTCGAGCC.......................... 22 1 12.00 3.00 8.00 1.00 ........................................................GTCCCGTGTCGGATTTTGTTACCTCTG..................................... 27 1 12.00 0.00 11.00 1.00 ....................................................................................TATTCGATCCAATAAGTTCGG............... 21 1 12.00 2.00 9.00 1.00 ....................................................................................TATTCGAACCAATAAGTTCGG............... 21 1 11.00 5.00 5.00 1.00 ...................AACTTGTGTGGCTTCGAA................................................................................... 18 1 11.00 0.00 11.00 0.00 ......................................................................................TTCGAGCCAATAAGTTCGGA.............. 20 1 11.00 6.00 4.00 1.00 ....................................................................................TATTCGAGCCAATACGTTCGGT.............. 22 1 11.00 8.00 3.00 0.00 ....................................................................................TATTGGAGCCAATAAGTTCGG............... 21 1 11.00 10.00 1.00 0.00 ........................................................GTCCCGTGTCGGATTTTGTTACCT........................................ 24 1 10.00 0.00 10.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGGT.............. 22 1 10.00 4.00 4.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTGGGA.............. 22 1 10.00 10.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCA................ 20 1 10.00 8.00 2.00 0.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:11794902-11795021 +	95.06	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAACCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ....................................................................................TATTCGAGCCAATAAGTTCGG............... 21 1 6511.00 368.00 182.00 5483.00 467.00 11.00 ....................................................................................TATTCGAGCCAATAAGTTCGGT.............. 22 1 3328.00 150.00 80.00 2869.00 224.00 5.00 ....................................................................................TATTCGAGCCAATAAGTTCG................ 20 1 2164.00 11.00 44.00 2016.00 87.00 6.00 ....................................................................................TATTCGAGCCAATAAGTTCGGA.............. 22 1 790.00 83.00 20.00 636.00 48.00 3.00 ....................................................................................TATTCGAGCCAATAAGTTCGTT.............. 22 1 215.00 9.00 2.00 192.00 12.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGT............... 21 1 194.00 0.00 5.00 155.00 19.00 15.00 ....................................................................................TATTCGAGCCAATAAGTTCGGC.............. 22 1 166.00 40.00 6.00 92.00 21.00 7.00 ....................................................................................TATTCGAGCCAATAAGTTCGA............... 21 1 47.00 1.00 1.00 39.00 5.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTT............. 23 1 44.00 0.00 0.00 40.00 4.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTC................. 19 1 42.00 0.00 3.00 34.00 5.00 0.00 ....................................................................................TATTCGAGCCAATACGTTCGG............... 21 1 35.00 0.00 0.00 23.00 12.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTA............. 23 1 29.00 1.00 0.00 24.00 4.00 0.00 ....................................................................................TATTCGAGCCCATAAGTTCGG............... 21 1 26.00 2.00 0.00 18.00 6.00 0.00 ....................................................................................TATTCGAGCCAATAAGTT.................. 18 1 24.00 4.00 3.00 6.00 10.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGTA.............. 22 1 22.00 4.00 1.00 16.00 1.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTACC............................................................................. 26 1 18.00 3.00 1.00 9.00 0.00 5.00 .......................................................AACCCCATGTCGGATTTTGTTACCT........................................ 25 1 16.00 0.00 0.00 2.00 0.00 14.00 .......................................................AACCCCATGTCGGATTTTGTTACCTCTG..................................... 28 1 16.00 0.00 0.00 1.00 0.00 15.00 ....................................................................................TATTCGAGCCACTAAGTTCGG............... 21 1 15.00 1.00 2.00 2.00 10.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCTT............... 21 1 14.00 0.00 0.00 13.00 0.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGC............... 21 1 13.00 0.00 1.00 8.00 4.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCTG............... 21 1 13.00 2.00 3.00 6.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCT................ 20 1 12.00 0.00 0.00 9.00 3.00 0.00 ....................................................................................TATTCGAGCCCATAAGTTCGGT.............. 22 1 11.00 1.00 0.00 6.00 4.00 0.00 ......................................................................................TTCGAGCCAATAAGTTCGGT.............. 20 1 10.00 0.00 0.00 10.00 0.00 0.00 ....................................................................................TATTCGAGCCAATACGTTCGGT.............. 22 1 10.00 0.00 0.00 5.00 5.00 0.00 ....................................................................................TATTCGAGCCAATACGTTCG................ 20 1 9.00 1.00 0.00 7.00 1.00 0.00 .....................................................................................ATTCGAGCCAATAAGTTCGG............... 20 1 9.00 1.00 0.00 8.00 0.00 0.00 ......................................................................................TTCGAGCCAATAAGTTCGG............... 19 1 9.00 0.00 0.00 8.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGG............... 21 1 9.00 0.00 0.00 8.00 1.00 0.00 ....................................ATGTACCTAGTTGAGGAAAA................................................................ 20 1 9.00 2.00 0.00 7.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCA................ 20 1 9.00 1.00 0.00 8.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGG............... 21 1 8.00 0.00 1.00 4.00 3.00 0.00 ....................................ATGTACCTAGTTGAGGAAA................................................................. 19 1 8.00 2.00 1.00 5.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCCG............... 21 1 8.00 1.00 0.00 6.00 1.00 0.00 .................GTAACTTGTGTGGCTTCGA.................................................................................... 19 1 7.00 2.00 0.00 5.00 0.00 0.00 ....................................................................................TATTCGAGCCCATAAGTTCG................ 20 1 7.00 0.00 0.00 5.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAA............. 23 1 7.00 0.00 0.00 6.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGTC.............. 22 1 7.00 0.00 1.00 3.00 1.00 2.00 ....................................................................................TATTCTAGCCAATAAGTTCGG............... 21 1 7.00 0.00 0.00 7.00 0.00 0.00 ....................................................................................TATTCGAGCCACTAAGTTCGGT.............. 22 1 7.00 2.00 1.00 1.00 3.00 0.00 .......................................................................TTGTTACCTCTGGTATTCGAGC........................... 22 1 7.00 3.00 0.00 4.00 0.00 0.00 ....................................................................................TATCCGAGCCAATAAGTTCGG............... 21 1 7.00 0.00 0.00 7.00 0.00 0.00 ....................................................................................TATTCGGGCCAATAAGTTCGG............... 21 1 7.00 0.00 1.00 5.00 1.00 0.00 .....................................................................................ATTCGAGCCAATAAGTTCGGT.............. 21 1 6.00 0.00 0.00 6.00 0.00 0.00 ....................................................................................TATTAGAGCCAATAAGTTCGG............... 21 1 6.00 2.00 1.00 1.00 2.00 0.00 ...................................................................................CTATTCGAGCCAATAAGTTCGGT.............. 23 1 6.00 1.00 0.00 5.00 0.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCGGT.............. 22 1 6.00 0.00 0.00 4.00 0.00 2.00 .............................................................................................CAATAAGTTCGGCCACGA......... 18 1 6.00 3.00 0.00 2.00 0.00 1.00 ....................................................................................TATTCGAGCCTATAAGTTCGG............... 21 1 6.00 2.00 0.00 3.00 1.00 0.00 ........................................................................TGTTACCTCTGGTATTCGAGC........................... 21 1 6.00 4.00 0.00 2.00 0.00 0.00 ....................................................................................TATTCGAGCCGATAAGTTCGG............... 21 1 6.00 0.00 1.00 4.00 1.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTAC.............................................................................. 25 1 6.00 1.00 0.00 5.00 0.00 0.00 ....................................................................................CATTCGAGCCAATAAGTTCGG............... 21 1 6.00 1.00 0.00 4.00 1.00 0.00 ........................................................ACCCCATGTCGGATTTTGTTACC......................................... 23 1 5.00 0.00 0.00 1.00 0.00 4.00 ....................................................................................TATTCGAGCCAATGAGTTCGGT.............. 22 1 5.00 0.00 1.00 4.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTTGG............... 21 1 5.00 0.00 0.00 5.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCAGT.............. 22 1 5.00 1.00 1.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTCCGG............... 21 1 5.00 0.00 1.00 4.00 0.00 0.00 ....................................................................................TATTCAAGCCAATAAGTTCGGT.............. 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ....................................................................................TATTCGAGCCAATCAGTTCGG............... 21 1 5.00 0.00 1.00 2.00 2.00 0.00 .......................................................AACCCCATGTCGGATTTTGTTACCTCTGG.................................... 29 1 5.00 0.00 0.00 1.00 0.00 4.00 ....................................................................................TATTCGATCCAATAAGTTCGG............... 21 1 5.00 0.00 3.00 2.00 0.00 0.00 ....................................................................................TATTCGACCCAATAAGTTCGG............... 21 1 5.00 0.00 0.00 4.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGG.............. 22 1 5.00 1.00 0.00 1.00 0.00 3.00 ....................................................................................TATTCGAGCCGATAAGTTCGGT.............. 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCAG............... 21 1 5.00 0.00 0.00 5.00 0.00 0.00 .................................CGAATGTACCTAGTTGAGGAAA................................................................. 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ....................................................................................TACTCGAGCCAATAAGTTCGGT.............. 22 1 5.00 1.00 0.00 4.00 0.00 0.00 ....................................................................................TATTTGAGCCAATAAGTTCGG............... 21 1 5.00 1.00 0.00 4.00 0.00 0.00 ...........................................TAGTTGAGGAAAAACCCCATGTCGGAT.................................................. 27 1 4.00 0.00 0.00 2.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGCTCGGT.............. 22 1 4.00 0.00 1.00 3.00 0.00 0.00 ....................................................................................TATTCGAGTCAATAAGTTCGG............... 21 1 4.00 0.00 0.00 2.00 2.00 0.00 ....................................................................................TATTCGAACCAATAAGTTCGG............... 21 1 4.00 0.00 0.00 4.00 0.00 0.00 ........................................................................TGTTACCTCTGGTATTCGAGCC.......................... 22 1 4.00 1.00 0.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATGAGTTCGG............... 21 1 4.00 0.00 2.00 1.00 1.00 0.00 ...................................AATGTACCTAGTTGAGGAAA................................................................. 20 1 4.00 3.00 0.00 1.00 0.00 0.00 ....................................................................................TAGTCGAGCCAATAAGTTCGGT.............. 22 1 4.00 1.00 1.00 0.00 2.00 0.00 ...........................................................CCATGTCGGATTTTGTTACCT........................................ 21 1 4.00 0.00 0.00 2.00 0.00 2.00 ...................................................................................CTATTCGAGCCAATAAGTTCGG............... 22 1 4.00 1.00 0.00 3.00 0.00 0.00 ....................................................................................TATTCGCGCCAATAAGTTCGG............... 21 1 4.00 0.00 0.00 2.00 2.00 0.00 ....................................................................................TATTCGAGCCAATCAGTTCGGT.............. 22 1 4.00 0.00 1.00 1.00 2.00 0.00 ....................................................................................TATTCAAGCCAATAAGTTCGG............... 21 1 4.00 0.00 0.00 4.00 0.00 0.00 ....................................................................................TACTCGAGCCAATAAGTTCGG............... 21 1 4.00 0.00 0.00 4.00 0.00 0.00 ....................................................................................TATTCGAACCAATAAGTTCGGT.............. 22 1 4.00 0.00 0.00 3.00 1.00 0.00 .................GTAACTTGTGTGGCTTCGAAT.................................................................................. 21 1 4.00 1.00 0.00 3.00 0.00 0.00 ......................................................................................TTCGAGCCAATAAGTTCGGA.............. 20 1 4.00 0.00 0.00 4.00 0.00 0.00 ....................................................................................TATTCGGGCCAATAAGTTCG................ 20 1 4.00 0.00 0.00 4.00 0.00 0.00 ....................................................................................TCTTCGAGCCAATAAGTTCGG............... 21 1 3.00 0.00 1.00 2.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAGG............... 21 1 3.00 0.00 0.00 2.00 1.00 0.00 ....................................................................................TAATCGAGCCAATAAGTTCGG............... 21 1 3.00 1.00 0.00 1.00 1.00 0.00 ..........................................................................TTACCTCTGGTATTCGAGCC.......................... 20 1 3.00 0.00 0.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGT............... 21 1 3.00 0.00 0.00 1.00 2.00 0.00 ....................................................................................TATTCxAGCCAATAAGTTCGG............... 20 1 3.00 0.00 0.00 2.00 0.00 1.00 .................GTAACTTGTGTGGCTTCGAATGT................................................................................ 23 1 3.00 0.00 0.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGGTCGG............... 21 1 3.00 1.00 0.00 1.00 1.00 0.00 .....................................................................TTTTGTTACCTCTGGTATTCGAGC........................... 24 1 3.00 1.00 0.00 1.00 0.00 1.00 ....................................................................................TATTCGAGCCAATAACTTCGG............... 21 1 3.00 1.00 0.00 2.00 0.00 0.00 ....................................................................................TATTCGAGCCAACAAGTTCGGT.............. 22 1 3.00 0.00 0.00 3.00 0.00 0.00 .........................................................................GTTACCTCTGGTATTCGAGCCA......................... 22 1 3.00 0.00 0.00 3.00 0.00 0.00 .....................CTTGTGTGGCTTCGAATGTACC............................................................................. 22 1 3.00 2.00 0.00 1.00 0.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4784:11743709-11743828 +	95.06	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAGAATCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ....................................................................................TATTCGAGCCAATAAGTTCGG............... 21 1 2706.00 368.00 742.00 0.00 1596.00 ....................................................................................TATTCGAGCCAATAAGTTCGGT.............. 22 1 1072.00 98.00 274.00 0.00 700.00 ....................................................................................TATTCGAGCCAATAAGTTCG................ 20 1 611.00 5.00 120.00 0.00 486.00 ....................................................................................TATTCGAGCCAATAAGTTCGGA.............. 22 1 566.00 102.00 106.00 0.00 358.00 ....................................................................................TATTCGAGCCAATAAGTTCGGC.............. 22 1 166.00 47.00 15.00 0.00 104.00 ....................................................................................TATTCGAGCCAATAAGTTC................. 19 1 75.00 4.00 3.00 0.00 68.00 ....................................................................................TATTCGAGCCAATAAGTTCGT............... 21 1 73.00 7.00 31.00 0.00 35.00 ....................................................................................TATTCGAGCCAATAAGTT.................. 18 1 51.00 2.00 0.00 0.00 49.00 ....................................................................................TATTCGAGCCAATAAGTTCGTT.............. 22 1 47.00 3.00 11.00 0.00 33.00 ....................................ATGTACCTAGTTGAGGAAGA................................................................ 20 1 34.00 11.00 1.00 0.00 22.00 ....................................................................................TATTCGAGCCAATAAGTTCGA............... 21 1 30.00 3.00 6.00 0.00 21.00 ....................................................................................TATTCGAGCCAATAAGTTCTG............... 21 1 29.00 9.00 7.00 0.00 13.00 .............................................................................................CAATAAGTTCGGCCACGA......... 18 1 28.00 0.00 0.00 0.00 28.00 ....................................................................................TATTCGAGCCAATAAGTTCGTA.............. 22 1 25.00 9.00 5.00 0.00 11.00 ....................................................................................TATTCTAGCCAATAAGTTCGG............... 21 1 23.00 5.00 0.00 0.00 18.00 .................GTAACTTGTGTGGCTTCGAATGTACC............................................................................. 26 1 23.00 9.00 1.00 0.00 13.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTA............. 23 1 19.00 1.00 2.00 0.00 16.00 ....................................................................................TATTCGAGCCAATAATTTCGG............... 21 1 19.00 1.00 3.00 0.00 15.00 ....................................................................................TATTCGAGACAATAAGTTCGG............... 21 1 16.00 0.00 0.00 0.00 16.00 ....................................................................................TATTCGAGCAAATAAGTTCGG............... 21 1 16.00 0.00 0.00 0.00 16.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTT............. 23 1 13.00 0.00 7.00 0.00 6.00 ......................................GTACCTAGTTGAGGAAGA................................................................ 18 1 13.00 4.00 0.00 0.00 9.00 ....................................................................................TATTCGAGCCAATAAGTTAGG............... 21 1 12.00 0.00 0.00 0.00 12.00 ....................................................................................TATTCGAGACAATAAGTTCGGT.............. 22 1 12.00 0.00 1.00 0.00 11.00 ....................................................................................TATTCGATCCAATAAGTTCGG............... 21 1 12.00 2.00 2.00 0.00 8.00 ....................................................................................TATTCGAGCCAATACGTTCGG............... 21 1 12.00 2.00 8.00 0.00 2.00 ....................................................................................TATTCGATCCAATAAGTTCGGT.............. 22 1 11.00 1.00 2.00 0.00 8.00 ....................................................................................TATTAGAGCCAATAAGTTCGGT.............. 22 1 10.00 1.00 0.00 0.00 9.00 ....................................................................................TATTCGAGCCAATAAGTTCT................ 20 1 10.00 0.00 2.00 0.00 8.00 ....................................................................................TATTCTAGCCAATAAGTTCGGT.............. 22 1 10.00 1.00 0.00 0.00 9.00 ....................................................................................TATTCGAGCCAATAAGTTCCG............... 21 1 10.00 7.00 1.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGGG.............. 22 1 8.00 3.00 3.00 0.00 2.00 ....................................................................................TATTCGAGCTAATAAGTTCGG............... 21 1 8.00 0.00 5.00 0.00 3.00 ....................................................................................TATTCGAGCCACTAAGTTCGG............... 21 1 8.00 0.00 7.00 0.00 1.00 .................GTAACTTGTGTGGCTTCGA.................................................................................... 19 1 7.00 5.00 0.00 0.00 2.00 ......................................................................TTTGTTACCTCTGGTATTCGAGC........................... 23 1 7.00 4.00 0.00 0.00 3.00 ....................................................................................TATTCxAGCCAATAAGTTCGG............... 20 1 7.00 0.00 0.00 0.00 7.00 ....................................................................................TATTCGAGCCAATAAGTTCTGA.............. 22 1 7.00 2.00 2.00 0.00 3.00 ....................................................................................TATTCGAGCCCATAAGTTCGG............... 21 1 7.00 2.00 5.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCTGT.............. 22 1 6.00 0.00 1.00 0.00 5.00 .....................................................................TTTTGTTACCTCTGGTATTCGAGC........................... 24 1 6.00 3.00 0.00 0.00 3.00 ..................................GAATGTACCTAGTTGAGGAAGA................................................................ 22 1 6.00 2.00 0.00 0.00 4.00 ....................................................................................TATTCGAGCAAATAAGTTCG................ 20 1 6.00 0.00 0.00 0.00 6.00 .......................................................................TTGTTACCTCTGGTATTCGAGC........................... 22 1 6.00 4.00 0.00 0.00 2.00 ....................................................................................TAGTCGAGCCAATAAGTTCGG............... 21 1 6.00 1.00 4.00 0.00 1.00 ....................................................................................TATTCTAGCCAATAAGTTCGGA.............. 22 1 6.00 0.00 0.00 0.00 6.00 ...................AACTTGTGTGGCTTCGAA................................................................................... 18 1 6.00 4.00 0.00 0.00 2.00 ....................................................................................TATTCGAGCCAATCAGTTCGG............... 21 1 6.00 1.00 3.00 0.00 2.00 ........................................................................TGTTACCTCTGGTATTCGAGC........................... 21 1 6.00 3.00 1.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGC............... 21 1 6.00 0.00 3.00 0.00 3.00 ...................................AATGTACCTAGTTGAGGAAGA................................................................ 21 1 5.00 2.00 0.00 0.00 3.00 ....................................................................................TAATCGAGCCAATAAGTTCGG............... 21 1 5.00 0.00 1.00 0.00 4.00 ....................................................................................TATTAGAGCCAATAAGTTCGG............... 21 1 5.00 0.00 0.00 0.00 5.00 ....................................................................................TATTCGAGCCAGTAAGTTCGG............... 21 1 5.00 1.00 2.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAATTTCGGT.............. 22 1 5.00 0.00 0.00 0.00 5.00 ....................................................................................TACTCGAGCCAATAAGTTCGG............... 21 1 5.00 0.00 2.00 0.00 3.00 .........................................................................GTTACCTCTGGTATTCGAGC........................... 20 1 5.00 5.00 0.00 0.00 0.00 .................GTAACTTGTGTGGCTTCGAAT.................................................................................. 21 1 5.00 2.00 0.00 0.00 3.00 ....................................................................................TATTCGAGCCAATACGTTCGGT.............. 22 1 5.00 0.00 5.00 0.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTAC.............................................................................. 25 1 5.00 1.00 2.00 0.00 2.00 ....................................................................................TATTCGAGTCAATAAGTTCGG............... 21 1 4.00 0.00 2.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAA............. 23 1 4.00 2.00 1.00 0.00 1.00 .....................................................................................ATTCGAGCCAATAAGTTCGGT.............. 21 1 4.00 0.00 0.00 0.00 4.00 ....................................................................................TATTCTAGCCAATAAGTTCGGC.............. 22 1 4.00 0.00 0.00 0.00 4.00 .....................................................................................ATTCGAGCCAATAAGTTCGG............... 20 1 4.00 0.00 2.00 0.00 2.00 ......................................................................................TTCGAGCCAATAAGTTCGGT.............. 20 1 4.00 0.00 1.00 0.00 3.00 ......................................................................................TTCGAGCCAATAAGTTCGG............... 19 1 4.00 1.00 0.00 0.00 3.00 ..............................CTTCGAATGTACCTAGTTGAGGAAGA................................................................ 26 1 4.00 0.00 0.00 0.00 4.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAT............. 23 1 4.00 2.00 0.00 0.00 2.00 ....................................................................................TATTCTAGCCAATAAGTTCG................ 20 1 4.00 0.00 0.00 0.00 4.00 ....................................................................................TATTCGAGCCACTAAGTTCGGT.............. 22 1 4.00 0.00 3.00 0.00 1.00 ........................................................................................CGAGCCAATAAGTTCGGA.............. 18 1 4.00 0.00 0.00 0.00 4.00 ....................................................................................TATTCGATCCAATAAGTTCGGA.............. 22 1 4.00 1.00 0.00 0.00 3.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCT............. 23 1 4.00 1.00 0.00 0.00 3.00 ..................TAACTTGTGTGGCTTCGAATGTACC............................................................................. 25 1 4.00 1.00 1.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCA............. 23 1 3.00 1.00 1.00 0.00 1.00 ........................................................ATCCCATGTCGGATTTTGTTACCTCTGGT................................... 29 1 3.00 1.00 1.00 0.00 1.00 .......................TGTGTGGCTTCGAATGTACC............................................................................. 20 1 3.00 0.00 0.00 0.00 3.00 .................GTAACTTGTGTGGCTTCG..................................................................................... 18 1 3.00 1.00 0.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAATTCGG............... 21 1 3.00 0.00 2.00 0.00 1.00 ..........................................................................TTACCTCTGGTATTCGAGC........................... 19 1 3.00 2.00 0.00 0.00 1.00 ....................................................................................TATTCGGGCCAATAAGTTCGGT.............. 22 1 3.00 1.00 0.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGTC.............. 22 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAACAAGTTCGG............... 21 1 3.00 0.00 1.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGCTCGG............... 21 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAG................ 20 1 3.00 0.00 0.00 0.00 3.00 ....................................................................................TATTCGAGCCAATAACTTCGG............... 21 1 3.00 0.00 0.00 0.00 3.00 ....................................................................................TATTCGAGCCCATAAGTTCGGA.............. 22 1 3.00 1.00 1.00 0.00 1.00 ....................................................................................TATTCGAGCCAATAAGCTCG................ 20 1 3.00 0.00 1.00 0.00 2.00 ....................................................................................TATTCGATCCAATAAGTTCG................ 20 1 3.00 0.00 0.00 0.00 3.00 .....................................TGTACCTAGTTGAGGAAGA................................................................ 19 1 3.00 2.00 0.00 0.00 1.00 ...................................................................................CTATTCGAGCCAATAAGTTCGG............... 22 1 3.00 0.00 1.00 0.00 2.00 ....................................................................................TATCCGAGCCAATAAGTTCGG............... 21 1 3.00 1.00 1.00 0.00 1.00 ....................................................................................TATTCGACCCAATAAGTTCGGA.............. 22 1 3.00 1.00 0.00 0.00 2.00 ....................................................................................TATTCGACCCAATAAGTTCGG............... 21 1 3.00 0.00 1.00 0.00 2.00 ....................................................................................TATTCAAGCCAATAAGTTCGG............... 21 1 3.00 0.00 0.00 0.00 3.00 ....................................ATGTACCTAGTTGAGGAA.................................................................. 18 1 3.00 0.00 0.00 0.00 3.00 ....................................................................................TATTCGAGCCAATAAGTTCTGC.............. 22 1 3.00 2.00 0.00 0.00 1.00 .....................................................................................ATTCGAGCCAATAAGTTCG................ 19 1 3.00 1.00 0.00 0.00 2.00 ....................................................................................TATTCGAGCCAATAAGTCGG................ 20 1 3.00 0.00 0.00 0.00 3.00 ......................TTGTGTGGCTTCGAATGTACCTAGTT........................................................................ 26 1 3.00 1.00 0.00 0.00 2.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000454113:2923978-2924097 -	95.06	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAGATCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409711:3637506-3637625 +	93.42	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAGATCCCGTGTTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302334:214342-214460 +	95.03	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAATCCCAT-TTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000414445:437081-437200 -	95.06	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAATCCCATGTTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000490993:2023315-2023433 -	95.85	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAA-TCCCATGTTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000779160:76370-76488 -	95.85	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAA-TCCCATGTTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302391:1074943-1075062 -	92.6	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAATTCAGTGTTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_13337:6019503-6019620 +	93.33	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAAT--CAGTTTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ....................................................................................TATTCGAGCCAATAAGTTCGGT.............. 22 1 11841.00 10174.00 473.00 1155.00 39.00 ....................................................................................TATTCGAGCCAATAAGTTCGG............... 21 1 8788.00 7544.00 360.00 838.00 46.00 ....................................................................................TATTCGAGCCAATAAGTTCG................ 20 1 3789.00 3338.00 233.00 212.00 6.00 ....................................................................................TATTCGAGCCAATAAGTTCGTT.............. 22 1 2159.00 1895.00 114.00 147.00 3.00 ....................................................................................TATTCGAGCCAATAAGTTCGGA.............. 22 1 1671.00 1383.00 100.00 176.00 12.00 ....................................................................................TATTCGAGCCAATAAGTTCGT............... 21 1 625.00 537.00 21.00 65.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGGC.............. 22 1 269.00 181.00 26.00 49.00 13.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTT............. 23 1 209.00 174.00 8.00 27.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGA............... 21 1 182.00 152.00 15.00 13.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGAT.............. 22 1 157.00 149.00 7.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGCT.............. 22 1 93.00 87.00 2.00 4.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCGGT.............. 22 1 93.00 87.00 3.00 3.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGTA.............. 22 1 91.00 82.00 4.00 5.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTA............. 23 1 77.00 52.00 15.00 7.00 3.00 ....................................................................................TATTCGAGACAATAAGTTCGGT.............. 22 1 67.00 62.00 4.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGC............... 21 1 61.00 52.00 5.00 4.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTC................. 19 1 60.00 44.00 3.00 13.00 0.00 ....................................................................................TATTCGAGCCAGTAAGTTCGGT.............. 22 1 58.00 56.00 0.00 2.00 0.00 ....................................................................................TATTCGAGACAATAAGTTCGG............... 21 1 52.00 45.00 4.00 3.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTACC............................................................................. 26 1 46.00 19.00 23.00 3.00 1.00 ....................................................................................TATTCGATCCAATAAGTTCGG............... 21 1 46.00 39.00 7.00 0.00 0.00 ....................................................................................TATTCGAGCCACTAAGTTCGGT.............. 22 1 40.00 35.00 0.00 5.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCT................ 20 1 39.00 37.00 1.00 1.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCGGT.............. 22 1 39.00 32.00 5.00 2.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCGG............... 21 1 35.00 29.00 5.00 1.00 0.00 ....................................................................................TATTCGAGCCAACAAGTTCGG............... 21 1 35.00 34.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCAGTAAGTTCGG............... 21 1 35.00 33.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCATTAAGTTCGGT.............. 22 1 33.00 31.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGG............... 21 1 32.00 32.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAACAAGTTCGGT.............. 22 1 31.00 31.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCGATAAGTTCGG............... 21 1 31.00 24.00 1.00 6.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGGT.............. 22 1 30.00 26.00 0.00 3.00 1.00 ....................................................................................TATTCGAGCCGATAAGTTCGGT.............. 22 1 30.00 25.00 2.00 3.00 0.00 ....................................................................................TATTCGAGCCAATAACTTCGGT.............. 22 1 29.00 27.00 0.00 1.00 1.00 ....................................................................................TATTCGAGCCACTAAGTTCGG............... 21 1 29.00 27.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGGT.............. 22 1 29.00 14.00 1.00 14.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCG................ 20 1 26.00 26.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAAGAAGTTCGGT.............. 22 1 26.00 25.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAATTCGG............... 21 1 24.00 23.00 0.00 0.00 1.00 ....................................................................................TATTAGAGCCAATAAGTTCGGT.............. 22 1 23.00 10.00 3.00 10.00 0.00 ....................................................................................TATTCGAGACAATAAGTTCG................ 20 1 23.00 22.00 1.00 0.00 0.00 ......................................................................................TTCGAGCCAATAAGTTCGGT.............. 20 1 22.00 20.00 1.00 1.00 0.00 ....................................................................................TATTCGAGCCCATAAGTTCGGT.............. 22 1 21.00 15.00 1.00 5.00 0.00 ...................................................................................GTATTCGAGCCAATAAGTTCGGT.............. 23 1 21.00 17.00 3.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAACTTCGG............... 21 1 21.00 20.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAGGT.............. 22 1 21.00 14.00 4.00 3.00 0.00 ....................................................................................TATTCGAGCCATTAAGTTCGG............... 21 1 20.00 18.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCTT............... 21 1 19.00 16.00 0.00 3.00 0.00 ....................................................................................TATACGAGCCAATAAGTTCGGT.............. 22 1 18.00 17.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGAA............. 23 1 18.00 13.00 2.00 3.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCTG............... 21 1 17.00 11.00 0.00 4.00 2.00 ....................................................................................TATTAGAGCCAATAAGTTCGG............... 21 1 17.00 11.00 1.00 5.00 0.00 ....................................................................................TATTCGAGCCAATAAGTT.................. 18 1 16.00 8.00 2.00 3.00 3.00 ......................................................................................TTCGAGCCAATAAGTTCGG............... 19 1 16.00 13.00 1.00 1.00 1.00 ....................................................................................TATTCGAGCCCATAAGTTCGG............... 21 1 16.00 13.00 0.00 3.00 0.00 ....................................................................................TATTCGAGCCAAAAAGTTCGGT.............. 22 1 16.00 16.00 0.00 0.00 0.00 ....................................................................................GATTCGAGCCAATAAGTTCGG............... 21 1 16.00 9.00 2.00 5.00 0.00 ....................................................................................TATTCGAGCCAATGAGTTCGGT.............. 22 1 16.00 15.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCTATAAGTTCGGT.............. 22 1 15.00 12.00 0.00 3.00 0.00 ....................................................................................TATTCGAGCCAATAAATTCGGT.............. 22 1 15.00 14.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAAGAAGTTCGG............... 21 1 15.00 15.00 0.00 0.00 0.00 ....................................................................................TAGTCGAGCCAATAAGTTCGGT.............. 22 1 15.00 0.00 4.00 11.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCG................ 20 1 15.00 12.00 2.00 1.00 0.00 ....................................................................................TATTCGAGTCAATAAGTTCGGT.............. 22 1 14.00 10.00 2.00 2.00 0.00 ....................................................................................TATTCGACCCAATAAGTTCGGT.............. 22 1 14.00 12.00 2.00 0.00 0.00 ....................................................................................TATTCGAGCCAAAAAGTTCGG............... 21 1 14.00 14.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATCAGTTCGGT.............. 22 1 14.00 12.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCAGTAAGTTCG................ 20 1 14.00 13.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCTGT.............. 22 1 14.00 11.00 1.00 2.00 0.00 ....................................................................................TATTCGAGCCAATACGTTCGGT.............. 22 1 14.00 9.00 0.00 5.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGAA.............. 22 1 14.00 11.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAGG............... 21 1 14.00 11.00 1.00 2.00 0.00 ....................................................................................TATACGAGCCAATAAGTTCGG............... 21 1 13.00 13.00 0.00 0.00 0.00 .....................................................................................ATTCGAGCCAATAAGTTCGGT.............. 21 1 13.00 11.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCGATAAGTTCG................ 20 1 13.00 12.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAGGTTCGGT.............. 22 1 12.00 10.00 1.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGCA.............. 22 1 12.00 10.00 2.00 0.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCGT............... 21 1 12.00 10.00 2.00 0.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCGGA.............. 22 1 12.00 11.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCAATCAGTTCGG............... 21 1 12.00 9.00 0.00 3.00 0.00 ....................................................................................GATTCGAGCCAATAAGTTCGGT.............. 22 1 12.00 10.00 0.00 2.00 0.00 ....................................................................................TCTTCGAGCCAATAAGTTCGGT.............. 22 1 12.00 11.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGATCGGT.............. 22 1 11.00 5.00 0.00 6.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCAGT.............. 22 1 11.00 10.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCAATACGTTCGG............... 21 1 11.00 4.00 0.00 6.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGGG.............. 22 1 11.00 6.00 0.00 5.00 0.00 ....................................................................................TATTCGAGCAAATAAGTTCGGT.............. 22 1 11.00 8.00 2.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCG................ 20 1 11.00 11.00 0.00 0.00 0.00 ..................TAACTTGTGTGGCTTCGAATGTACC............................................................................. 25 1 11.00 9.00 1.00 1.00 0.00 ....................................................................................TATTCGGGCCAATAAGTTCGGT.............. 22 1 10.00 8.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCAAATAAGTTCGG............... 21 1 10.00 9.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCAG............... 21 1 10.00 8.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGG............... 21 1 10.00 7.00 1.00 2.00 0.00 ....................................................................................TGTTCGAGCCAATAAGTTCGGT.............. 22 1 10.00 10.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAACTTCG................ 20 1 10.00 10.00 0.00 0.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCGGA.............. 22 1 10.00 7.00 2.00 0.00 1.00 ....................................................................................TATCCGAGCCAATAAGTTCGGT.............. 22 1 10.00 7.00 0.00 3.00 0.00 ....................................................................................TATTCGAGCCAATAAGTGCGG............... 21 1 10.00 0.00 0.00 10.00 0.00 ....................................................................................TATTCGAGCCAACAAGTTCG................ 20 1 9.00 9.00 0.00 0.00 0.00 ....................................................................................CATTCGAGCCAATAAGTTCGG............... 21 1 9.00 8.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAGTAAGTTCGGA.............. 22 1 9.00 9.00 0.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000396518:82752-82869 +	93.33	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAAAT--CAGTTTGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrXR_group8:4342117-4342235 -	92.55	TGGCCCGCACTCTTATCGTAACTTGTGTGGCTTCGAACTTACCTAGTTGAGGAAAACTCCCATGTCGGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAATTCGCATT TGGTCCGCACTCTTATCGTAACTTGTGTGGCTTCGAATGTACCTAGTTGAGGAAAACTCCGAAAT-GGATTTTGTTACCTCTGGTATTCGAGCCAATAAGTTCGGCCACGAAATCGCATT Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ....................................................................................TATTCGAGCCAATAAGTTCGG............... 21 1 5749.00 3951.00 565.00 1225.00 8.00 ....................................................................................TATTCGAGCCAATAAGTTCGGT.............. 22 1 2908.00 2089.00 198.00 606.00 15.00 ....................................................................................TATTCGAGCCAATAAGTTCG................ 20 1 2051.00 1798.00 17.00 234.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTCGGA.............. 22 1 600.00 377.00 79.00 135.00 9.00 ....................................................................................TATTCGAGCCAATAAGTTCGGC.............. 22 1 234.00 97.00 89.00 41.00 7.00 ....................................................................................TATTCGAGCCAATAAGTTCGTT.............. 22 1 154.00 132.00 4.00 14.00 4.00 ....................................................................................TATTCGAGCCAATAAGTTCGT............... 21 1 114.00 70.00 5.00 32.00 7.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTT............. 23 1 65.00 53.00 2.00 9.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGGTA............. 23 1 34.00 22.00 3.00 9.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGA............... 21 1 31.00 19.00 5.00 7.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTACC............................................................................. 26 1 28.00 5.00 18.00 3.00 2.00 ....................................................................................TATTCGAGCCAATAAGTTC................. 19 1 19.00 8.00 1.00 9.00 1.00 ....................................................................................TATTCGAGCCAATAAGTT.................. 18 1 19.00 7.00 12.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGG............... 21 1 12.00 5.00 3.00 4.00 0.00 ..................TAACTTGTGTGGCTTCGAATGTACC............................................................................. 25 1 12.00 5.00 4.00 0.00 3.00 ....................................................................................TATTCGAGCCAATACGTTCGG............... 21 1 11.00 3.00 3.00 5.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCAG............... 21 1 10.00 4.00 4.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGG............... 21 1 10.00 7.00 1.00 1.00 1.00 ....................................................................................TATTCGAGCCAATAAGTTCGC............... 21 1 9.00 5.00 1.00 2.00 1.00 ....................................................................................TATTCGAGCCAATAAGCTCGGT.............. 22 1 9.00 5.00 1.00 3.00 0.00 ....................................................................................TACTCGAGCCAATAAGTTCGG............... 21 1 8.00 2.00 2.00 4.00 0.00 ....................................................................................TATTCGAGCCAATAAGTCCGG............... 21 1 8.00 7.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAATTCGG............... 21 1 8.00 3.00 1.00 4.00 0.00 ....................................................................................TATTCGAGCCAATAAGTCGG................ 20 1 8.00 8.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCT............. 23 1 8.00 3.00 2.00 1.00 2.00 ....................................................................................TATTCGAGCCCATAAGTTCGG............... 21 1 8.00 3.00 3.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGTA.............. 22 1 8.00 6.00 1.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCA................ 20 1 8.00 8.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCTG............... 21 1 7.00 2.00 1.00 4.00 0.00 ....................................................................................TATTCGAGCCAATAAGATCGG............... 21 1 7.00 1.00 1.00 5.00 0.00 ....................................................................................TATTCGAGCCGATAAGTTCGG............... 21 1 7.00 2.00 1.00 4.00 0.00 ...................................................................................CTATTCGAGCCAATAAGTTCGG............... 22 1 7.00 5.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCT................ 20 1 6.00 5.00 0.00 1.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCGG............... 21 1 6.00 5.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATACGTTCGGT.............. 22 1 6.00 2.00 1.00 3.00 0.00 ....................................................................................TATTCGAGCCAATCAGTTCGG............... 21 1 6.00 1.00 5.00 0.00 0.00 .......................................................................TTGTTACCTCTGGTATTCGAGC........................... 22 1 6.00 2.00 4.00 0.00 0.00 ....................................................................................TATCCGAGCCAATAAGTTCGG............... 21 1 6.00 4.00 0.00 2.00 0.00 .....................................................................................ATTCGAGCCAATAAGTTCGGT.............. 21 1 6.00 5.00 0.00 1.00 0.00 ....................................ATGTACCTAGTTGAGGAA.................................................................. 18 1 6.00 0.00 6.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCCG............... 21 1 6.00 2.00 2.00 2.00 0.00 ....................................................................................TAGTCGAGCCAATAAGTTCGG............... 21 1 6.00 0.00 1.00 5.00 0.00 ....................................................................................TATTCAAGCCAATAAGTTCGGT.............. 22 1 6.00 5.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGATCGGT.............. 22 1 6.00 0.00 0.00 6.00 0.00 ....................................................................................TATTCGAGCCAATAAGGTCGG............... 21 1 6.00 0.00 3.00 3.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTAC.............................................................................. 25 1 6.00 3.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGCA............. 23 1 5.00 1.00 3.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAGGTTCGG............... 21 1 5.00 4.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTTGGT.............. 22 1 5.00 3.00 1.00 1.00 0.00 ........................................................................TGTTACCTCTGGTATTCGAGC........................... 21 1 5.00 0.00 5.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTGCGG............... 21 1 5.00 0.00 1.00 4.00 0.00 ....................................................................................TATTCGAGCCGATAAGTTCGGT.............. 22 1 5.00 2.00 1.00 2.00 0.00 ....................................................................................TAGTCGAGCCAATAAGTTCGGT.............. 22 1 5.00 0.00 0.00 5.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCGG............... 21 1 5.00 5.00 0.00 0.00 0.00 ....................................................................................TATTAGAGCCAATAAGTTCGG............... 21 1 5.00 0.00 3.00 2.00 0.00 ....................................................................................TATTCGAGCCAACAAGTTCGG............... 21 1 5.00 3.00 1.00 1.00 0.00 ....................................................................................TATTCGAGCCAGTAAGTTCGG............... 21 1 5.00 2.00 1.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGGG.............. 22 1 5.00 0.00 3.00 1.00 1.00 ....................................................................................TATTCCAGCCAATAAGTTCGG............... 21 1 5.00 5.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCACTAAGTTCGGT.............. 22 1 5.00 0.00 3.00 2.00 0.00 ....................................................................................TAATCGAGCCAATAAGTTCGG............... 21 1 5.00 0.00 0.00 5.00 0.00 .................GTAACTTGTGTGGCTTCGAATGTA............................................................................... 24 1 4.00 3.00 1.00 0.00 0.00 .....................................................................................ATTCGAGCCAATAAGTTCGG............... 20 1 4.00 3.00 0.00 1.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCGGT.............. 22 1 4.00 3.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCTATAAGTTCGG............... 21 1 4.00 3.00 1.00 0.00 0.00 ....................................................................................TATTCGATCCAATAAGTTCG................ 20 1 4.00 4.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCxATAAGTTCGG............... 20 1 4.00 4.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAGTAAGTTCGGT.............. 22 1 4.00 3.00 1.00 0.00 0.00 ....................................ATGTACCTAGTTGAGGAAAACT.............................................................. 22 1 4.00 1.00 3.00 0.00 0.00 ....................................................................................TATTAGAGCCAATAAGTTCGGT.............. 22 1 4.00 1.00 0.00 3.00 0.00 ....................................................................................TACTCGAGCCAATAAGTTCGGT.............. 22 1 4.00 2.00 1.00 1.00 0.00 ....................................................................................TATTCGAGACAATAAGTTCGG............... 21 1 4.00 1.00 3.00 0.00 0.00 .................GTAACTTGTGTGGCTTCGAAT.................................................................................. 21 1 4.00 1.00 3.00 0.00 0.00 ....................................................................................TATTTGAGCCAATAAGTTCGGT.............. 22 1 4.00 3.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCGTC.............. 22 1 4.00 1.00 1.00 2.00 0.00 .................GTAACTTGTGTGGCTTCGA.................................................................................... 19 1 3.00 0.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAG................ 20 1 3.00 1.00 0.00 2.00 0.00 ...................................................................................CTATTCGAGCCAATAAGTTCGGT.............. 23 1 3.00 2.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCCATAAGTTCGGT.............. 22 1 3.00 2.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCGGA.............. 22 1 3.00 0.00 1.00 2.00 0.00 .............................................................................................CAATAAGTTCGGCCACGA......... 18 1 3.00 0.00 3.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTAGG............... 21 1 3.00 0.00 1.00 2.00 0.00 ......................................................................................TTCGAGCCAATAAGTTCGG............... 19 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCGT............... 21 1 3.00 0.00 1.00 1.00 1.00 ....................................................................................TATTCAAGCCAATAAGTTCGG............... 21 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCGTGCCAATAAGTTCGG............... 21 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAACTTCG................ 20 1 3.00 2.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCxATAAGTTCG................ 19 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCTAGCCAATAAGTTCG................ 20 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCC................ 20 1 3.00 1.00 0.00 2.00 0.00 ....................................................................................TATTAGAGCCAATAAGCTCGG............... 21 1 3.00 0.00 2.00 1.00 0.00 .....................................................................................ATTCGAGCCAATAAGTTCG................ 19 1 3.00 3.00 0.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAATTTCGGT.............. 22 1 3.00 2.00 0.00 0.00 1.00 ....................................................................................CATTCGAGCCAATAAGTTCGG............... 21 1 3.00 2.00 1.00 0.00 0.00 ....................................................................................TATTCGAGCCAATAAGTTCAGT.............. 22 1 3.00 1.00 0.00 2.00 0.00 ....................................................................................TATTCGAGCCAATAAGCTCG................ 20 1 3.00 2.00 0.00 1.00 0.00 ....................................................................................TATTCGAGCCAATAACTTCGG............... 21 1 3.00 2.00 1.00 0.00 0.00 ....................................................................................TATCCGAGCCAATAAGTTCG................ 20 1 3.00 2.00 0.00 1.00 0.00

droPer1 - 1 hit found