Possible Orthologs for dme-mir-309

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2R:14254629-14254727 -	96.99	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AAGTTTGGAACAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..........................................................GCACTGGGTAAAGTTTGTCCTA................... 22 1 979.00 974.00 1.00 0.00 4.00 ..........................................................GCACTGGGTAAAGTTTGTCCT.................... 21 1 617.00 606.00 0.00 0.00 11.00 .....................CGACAAACCTTGTTCGGTTTTG........................................................ 22 1 401.00 20.00 1.00 0.00 380.00 ..........................................................GCACTGGGTAAAGTTTGTCC..................... 20 1 26.00 26.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAACGTTTGTCCTA................... 22 1 11.00 11.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTC...................... 19 1 10.00 10.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGCTTGTCCTA................... 22 1 7.00 7.00 0.00 0.00 0.00 ..........................................................GCACTGGGTACAGTTTGTCCT.................... 21 1 7.00 7.00 0.00 0.00 0.00 ..........................................................GCACTGGGTACAGTTTGTCCTA................... 22 1 7.00 7.00 0.00 0.00 0.00 ..........................................................GCACTGGGCAAAGTTTGTCCTA................... 22 1 6.00 6.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTCTCCTA................... 22 1 6.00 6.00 0.00 0.00 0.00 .....................CGACAAACCTTGTTCGGTTTT......................................................... 21 1 5.00 5.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAACGTTTGTCCT.................... 21 1 5.00 5.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCTAA.................. 23 1 5.00 5.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTATCCTA................... 22 1 4.00 4.00 0.00 0.00 0.00 .....................CGACAAACCTTGTTCGGTTTTGT....................................................... 23 1 4.00 2.00 0.00 0.00 2.00 ..........................................................GCACTGGGTCAAGTTTGTCCT.................... 21 1 4.00 4.00 0.00 0.00 0.00 ..........................................................GCACTGGGCAAAGTTTGTCCT.................... 21 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTACTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGCTTGTCCT.................... 21 1 3.00 2.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCCTT................... 22 1 3.00 3.00 0.00 0.00 0.00 .....................CGACAAACCTTGTTCGGATTTG........................................................ 22 1 3.00 0.00 0.00 0.00 3.00 ..........................................................GCACTGGGTAAAGTTTGCCCT.................... 21 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGATTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTCAAGTTTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCTAAA................. 24 1 3.00 3.00 0.00 0.00 0.00 ........................................................CAGCACTGGGTAAAGTTTGTCCT.................... 23 1 3.00 1.00 0.00 0.00 2.00 ..........................................................GCACTGGGTAAAGTTTTTCCTT................... 22 1 3.00 3.00 0.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_1:13063923-13064021 -	96.99	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AAGTTTGGAACAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................................................GCACTGGGTAAAGTTTGTCCTA................... 22 1 7778.00 5.00 7493.00 280.00 ..........................................................GCACTGGGTAAAGTTTGTCCT.................... 21 1 2479.00 2.00 2371.00 106.00 ..........................................................GCACTGGGTAAAGTTTGTCC..................... 20 1 146.00 0.00 143.00 3.00 .....................CGACAAACCTTGTTCGGTTTTG........................................................ 22 1 104.00 0.00 103.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTC...................... 19 1 51.00 1.00 49.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCCTAA.................. 23 1 33.00 0.00 32.00 1.00 ..........................................................GTACTGGGTAAAGTTTGTCCTA................... 22 1 29.00 0.00 28.00 1.00 ..........................................................GCATTGGGTAAAGTTTGTCCTA................... 22 1 27.00 0.00 27.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCTAT.................. 23 1 24.00 0.00 24.00 0.00 ..........................................................GCACTGGGTAAAGTTTGCCCTA................... 22 1 16.00 0.00 15.00 1.00 ..........................................................GCACTGGGTAAAGTTTCTCCTA................... 22 1 15.00 0.00 15.00 0.00 .........................................................AGCACTGGGTAAAGTTTGTCCT.................... 22 1 12.00 0.00 12.00 0.00 ..........................................................GCGCTGGGTAAAGTTTGTCCTA................... 22 1 12.00 0.00 11.00 1.00 ............................................................ACTGGGTAAAGTTTGTCCTA................... 20 1 11.00 0.00 11.00 0.00 ..........................................................GCACTGGGCAAAGTTTGTCCTA................... 22 1 11.00 0.00 11.00 0.00 ..........................................................GCACTGGGTAAAGCTTGTCCTA................... 22 1 10.00 0.00 10.00 0.00 ..........................................................GCACTGGGTAAGGTTTGTCCTA................... 22 1 10.00 0.00 9.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCCTAC.................. 23 1 10.00 0.00 10.00 0.00 ..........................................................GCACTGGGTAAAGTTCGTCCTA................... 22 1 10.00 0.00 8.00 2.00 ..........................................................GCACTGGGTAAAGTTTGTCTTA................... 22 1 9.00 0.00 9.00 0.00 ..........................................................GCATTGGGTAAAGTTTGTCCT.................... 21 1 9.00 0.00 9.00 0.00 ..........................................................GCACTGGGTAAAGTCTGTCCTA................... 22 1 9.00 0.00 9.00 0.00 ..........................................................GCACTxGGTAAAGTTTGTCCTA................... 21 1 8.00 0.00 8.00 0.00 .....................CGACAAACCTTGTTCGGTTTT......................................................... 21 1 8.00 0.00 8.00 0.00 ..........................................................GCACCGGGTAAAGTTTGTCCTA................... 22 1 8.00 0.00 8.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTACTA................... 22 1 7.00 1.00 5.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCCTG................... 22 1 7.00 0.00 7.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCTAAA................. 24 1 7.00 0.00 7.00 0.00 ..........................................................GCACTGGGTAAAGxTTGTCCTA................... 21 1 7.00 0.00 7.00 0.00 ..........................................................GCACTGGCTAAAGTTTGTCCTA................... 22 1 7.00 0.00 7.00 0.00 ..........................................................GCACTGGGTAAAGTTTATCCTA................... 22 1 7.00 0.00 7.00 0.00 ..........................................................CCACTGGGTAAAGTTTGTCCTA................... 22 1 7.00 0.00 6.00 1.00 ..........................................................GCCCTGGGTAAAGTTTGTCCTA................... 22 1 6.00 0.00 6.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTTCTA................... 22 1 6.00 0.00 6.00 0.00 ..........................................................GCACTGGGTAGAGTTTGTCCTA................... 22 1 6.00 0.00 6.00 0.00 ..........................................................GTACTGGGTAAAGTTTGTCCT.................... 21 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTAAAGTTTTTCCTA................... 22 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTAAAGxTTGTCCT.................... 20 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTACAGTTTGTCCTA................... 22 1 5.00 0.00 5.00 0.00 ..........................................................TCACTGGGTAAAGTTTGTCCT.................... 21 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTAACGTTTGTCCTA................... 22 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCCTA................... 22 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCCT.................... 21 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTAAAGTATGTCCTA................... 22 1 5.00 0.00 5.00 0.00 ..........................................................GCGCTGGGTAAAGTTTGTCCT.................... 21 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTxAAGTTTGTCCTA................... 21 1 5.00 0.00 5.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCC.................... 21 1 4.00 0.00 4.00 0.00 ..........................................................GCACTGGGTAAAGTTAGTCCTA................... 22 1 4.00 0.00 4.00 0.00 ..........................................................GCTCTGGGTAAAGTTTGTCCTA................... 22 1 4.00 0.00 4.00 0.00 ..........................................................GCAATGGGTAAAGTTTGTCCTA................... 22 1 4.00 0.00 4.00 0.00 ..........................................................GCACTGGGCAAAGTTTGTCCT.................... 21 1 4.00 0.00 4.00 0.00 .........................................................CGCACTGGGTAAAGTTTGTCCTA................... 23 1 4.00 0.00 4.00 0.00 ..........................................................GCACTxGGTAAAGTTTGTCCT.................... 20 1 4.00 0.00 4.00 0.00 ..........................................................GCACTGGGTAATGTTTGTCCTA................... 22 1 4.00 0.00 3.00 1.00 ..........................................................GCACTGGGTAAAGTTCGTCCT.................... 21 1 4.00 0.00 4.00 0.00 ..........................................................GCACTGGGTAAATTTTGTCCTA................... 22 1 3.00 0.00 3.00 0.00 ..........................................................GCACTxxGTAAAGTTTGTCCTA................... 20 1 3.00 0.00 2.00 1.00 ..........................................................GCACTGGGGAAAGTTTGTCCTA................... 22 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCCA................... 22 1 3.00 0.00 3.00 0.00 ..........................................................TCACTGGGTAAAGTTTGTCCTA................... 22 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCTT................... 22 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCTC................... 22 1 3.00 0.00 3.00 0.00 ............................................................ACTGGGTAAAGTTTGTCCT.................... 19 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAAGTTTGCCCT.................... 21 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAAGTTGGTCCTA................... 22 1 3.00 0.00 3.00 0.00 ........................................................CAGCACTGGGTAAAGTTTGTCCT.................... 23 1 3.00 0.00 3.00 0.00 ..........................................................ACACTGGGTAAAGTTTGTCCTA................... 22 1 3.00 0.00 3.00 0.00 .........................................................AGCACTGGGTAAAGTTTGTCC..................... 21 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAAGTTTATCCT.................... 21 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAAGATTGTCCTA................... 22 1 3.00 0.00 3.00 0.00 ...........................................................CACTGGGTAAAGTTTGTCCT.................... 20 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGATAAAGTTTGTCCTA................... 22 1 3.00 0.00 3.00 0.00 ..........................................................GCACTGGGTAAACTTTGTCCT.................... 21 1 3.00 0.00 2.00 1.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2R:13623487-13623590 +	86.09	AA-----GTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AAGCAAAGTTTGGAACAGCAATTATACGACAAACCTTGTTCTGTTTTGCCAATTTCCTAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ...............................................................GCACTGGGTAAAGTTTGTCCTA................... 22 1 419.00 418.00 0.00 0.00 1.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCCT.................... 21 1 182.00 180.00 0.00 0.00 2.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCC..................... 20 1 7.00 7.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCCTAA.................. 23 1 5.00 5.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGGAAAGTTTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAGAGTTTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTC...................... 19 1 3.00 3.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAACGTTTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTACTA................... 22 1 2.00 2.00 0.00 0.00 0.00 0.00 ...............................................................GCCCTGGGTAAAGTTTGTCCTA................... 22 1 2.00 2.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGCAAAGTTTGTCCTA................... 22 1 2.00 2.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTACAGTTTGTCCTA................... 22 1 2.00 2.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAGGTTTGTCCTA................... 22 1 2.00 2.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAATTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGCCAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTACAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................CCACTGGGTAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCGCTGGGTAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 .................................................................ACTGGGTAAAGTTTGTCCTA................... 20 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GGACTGGGTAAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTTAAGCTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................CGCACTGGGTAAAGTTTGTCCT.................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................AGCACTGGGTAAAGTTTGTCCT.................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCAATGGGTAAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGCGTATAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGTGTAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GGACTGGGTAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................CCACTGGGTAAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCCTC................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTGAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGAGTAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGGTCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCCC.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................ACACTGGGTAAAGTTTGTTCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCCTAT.................. 23 1 1.00 0.00 0.00 1.00 0.00 0.00 ...............................................................GCACGGGGTTAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCCCTGGGTAACGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTCTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGATTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTCTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGATTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTxAAGTTTGTCCTA................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTACAGTTTGTCA..................... 20 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCTTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ..........................CGACAAACCTTGTTCTGTTTT......................................................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ..........................CGACAAACCTTGTTCTGT............................................................ 18 1 1.00 1.00 0.00 0.00 0.00 0.00 ..............................................................CGCACTGGGTAAAGTTTGTCCTA................... 23 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGGTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAGGTTTGTCCT.................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 ...............................................................GCACTGGGGAATGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCCTT................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GAACTGGGTCAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GGACTGGGGAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTCAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GAACTGAGTAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGAAAAGATTGTC...................... 19 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTTTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACCGGGTAAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGCTAAAGTTTGTCCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTGCTA................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGGGTAAAGTTTGTCCTG................... 22 1 1.00 1.00 0.00 0.00 0.00 0.00 ...............................................................GCACTGTGTAAAGTTTGTCCT.................... 21 1 1.00 1.00 0.00 0.00 0.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4845:9749440-9749538 -	95.01	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC GAGTTTGGAACAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..........................................................GCACTGGGTAAAGTTTGTCCTA................... 22 1 385.00 384.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCCT.................... 21 1 187.00 187.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTTTCCTA................... 22 1 16.00 16.00 0.00 0.00 0.00 .....................CGACAAACCTTGTTCGGTTTTG........................................................ 22 1 7.00 7.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCC..................... 20 1 6.00 6.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTTTCCT.................... 21 1 5.00 5.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGGTTGTCCTA................... 22 1 4.00 4.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTCCTC................... 22 1 4.00 4.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTGTC...................... 19 1 4.00 4.00 0.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTTGGTAAAGTTTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAAGATTTTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAATTTTGTCCT.................... 21 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTT.................... 21 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTAAGGTTTGTCCTA................... 22 1 3.00 2.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAACGTTTGTCCTA................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................................................GCACTGGGTCAAGTTTGTCCT.................... 21 1 3.00 3.00 0.00 0.00 0.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000454039:848303-848400 -	89.98	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AAGCTCCGAAAAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTCGAGAAGACGACC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409474:2396603-2396701 +	88.98	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC A-GTTCGGAACAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTGCTAGTCAGCACTGGGTAAAGTTTGTCCTATAATCCCGATAATACAACC Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302143:3060087-3060184 -	89.98	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC CAGCTCGGGACAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAAGACGACC Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000415384:83792-83889 +	90.98	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC CAGTTCGGAACAGTAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAAGACGACC Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000491201:2014262-2014364 -	82.4	A---------AGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AGCAACTCGAA----GGAAAAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAAGACGACC Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000780066:73396-73493 +	89.98	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AAGCTCGGAAAAGCAATTATACGACAAACCTTGTTCGGTTTTGCAAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTTGAAAAGACGACC Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302679:89661-89756 -	88.05	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC ---TTCGGCAAAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTCAAAACGACGACC Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13266:9731105-9731197 +	76.06	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCG--AAACGACGACC -------GAAGATC-ATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTATAAAAAAGCCGTCC Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..........................................................GCACTGGGTAAAGTTTGTCCTA..................... 22 1 91.00 2.00 5.00 10.00 74.00 ..........................................................GCACTGGGTAAAGTTTGTCCT...................... 21 1 56.00 1.00 2.00 5.00 48.00 ..........................................................GCACTGGGTGAAGTTTGTCTTA..................... 22 1 10.00 0.00 0.00 0.00 10.00 ..........................................................GCACTGGGTAAAGTTTTTCCT...................... 21 1 2.00 0.00 0.00 0.00 2.00 ..........................................................GCACTGGGTAAAGTTTGTCC....................... 20 1 2.00 0.00 0.00 0.00 2.00 ..........................................................GCACTGCGTAAAGTTTGTCCTA..................... 22 1 2.00 0.00 0.00 0.00 2.00 ..........................................................GCACTGGGGAAAGTTTGTCCT...................... 21 1 2.00 1.00 0.00 0.00 1.00 .........................................................AGCACTGGGTAAAGTTTGTCCT...................... 22 1 2.00 0.00 0.00 1.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCCTAT.................... 23 1 2.00 0.00 0.00 0.00 2.00 ..........................................................GCACTGGGTAAAGTTTGTACTA..................... 22 1 2.00 0.00 0.00 1.00 1.00 .....................CGACAAACCTTCTTCGGTTTTG.......................................................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGTTTATCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGGAAAGTTTCTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTTCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGATAAAGTTTGTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGCGTAAAGTTTGTCCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGTTTCTCCTA..................... 22 1 1.00 0.00 0.00 1.00 0.00 .....................CGACAAACCTTGTTCGGTTTTT.......................................................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGTGTAAAGTTTCTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGCTTGTCCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ........................CAAACCTTGTTCGGTTTTGC......................................................... 20 1 1.00 0.00 0.00 1.00 0.00 ..........................................................GCACTGGGTCAAGTTTGTCCTG..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGAAAAGTTTGTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 .........................................................AGCACTGGGTAAAGTTTGTCC....................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAACGGTTGTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................ACACTGGGTAAAGTTTGTCTTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................CCACTGGGTAAAGTTTATCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GAACTGGGTAAAGTTTGTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 .....................CGACAAACCTTGTTCGGTTTT........................................................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAATGTTTGTCCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCCTT..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGATTGTCCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGCTAAAGTTTGTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTCGGTAAAGTTTGTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAGGTTTGTCCTAA.................... 23 1 1.00 1.00 0.00 0.00 0.00 ..........................................................GCACTGGTCAAAGTTTGTCCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAAGTTTGTCAT...................... 21 1 1.00 0.00 1.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTCTGTCCTA..................... 22 1 1.00 0.00 1.00 0.00 0.00 ..........................................................GCACTGGGTAAAGTTTTTCCTC..................... 22 1 1.00 0.00 0.00 0.00 1.00 ..........................................................CCACTGGGTAAAGCTTGTCCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGTAAATTTTGTCCT...................... 21 1 1.00 0.00 0.00 0.00 1.00 ..........................................................GCACTGGGCAAAGTTTGTCCT...................... 21 1 1.00 0.00 0.00 1.00 0.00 ..........................................................GCACTGGGTAAAGTTTTTCCTA..................... 22 1 1.00 0.00 0.00 0.00 1.00 .....................CGACAAACCTTGTTCGGTTTTG.......................................................... 22 1 1.00 0.00 1.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396427:874084-874176 +	77.0	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAA-ACG-ACGACC -------GAA-AGCCATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCTAGC-AGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAATGAACGTCC Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3:12677873-12677971 -	72.51	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGA-CGACC AACTATCTCGGAACTATTATACGATAAACTTTGTTCAGTTTTGCCAACTTGCTTG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTAAGCGATC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ..........................................................GCACTGGGTGAAGTTTGTCTTA.................... 22 1 1132.00 0.00 1132.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTT..................... 21 1 160.00 1.00 159.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTTAA................... 23 1 100.00 2.00 98.00 0.00 0.00 ..........................................................GCACTGGGTGCAGTTTGTCTTA.................... 22 1 18.00 0.00 18.00 0.00 0.00 ..........................................................GCACTGGGTGGAGTTTGTCTTA.................... 22 1 12.00 0.00 12.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTTT.................... 22 1 9.00 0.00 9.00 0.00 0.00 .........................................................AGCACTGGGTGAAGTTTGTCTT..................... 22 1 8.00 0.00 8.00 0.00 0.00 ..........................................................GCACTGGGCGAAGTTTGTCTTA.................... 22 1 7.00 0.00 7.00 0.00 0.00 .........................................................AGCACTGGGTGAAGTTTGTCTTA.................... 23 1 7.00 0.00 7.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTTAC................... 23 1 6.00 0.00 6.00 0.00 0.00 ..........................................................GCACTGGGTGTAGTTTGTCTTA.................... 22 1 5.00 0.00 5.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTTG.................... 22 1 5.00 0.00 5.00 0.00 0.00 ..........................................................GCACTGGGTGAAGATTGTCTTA.................... 22 1 5.00 0.00 5.00 0.00 0.00 ..........................................................GAACTGGGTGAAGTTTGTCTTA.................... 22 1 5.00 0.00 5.00 0.00 0.00 ..........................................................GCACTGGGAGAAGTTTGTCTTA.................... 22 1 5.00 0.00 5.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTTAT................... 23 1 5.00 0.00 5.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCTTAAA.................. 24 1 5.00 0.00 5.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGCCTTA.................... 22 1 4.00 0.00 4.00 0.00 0.00 ..........................................................GCACTGGGTGACGTTTGTCTTA.................... 22 1 4.00 0.00 4.00 0.00 0.00 .....................CGATAAACTTTGTTCAGTTTTG......................................................... 22 1 4.00 0.00 4.00 0.00 0.00 ..........................................................GCACTGGGTGAAGCTTGTCTTA.................... 22 1 4.00 0.00 4.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGTCT...................... 20 1 4.00 0.00 4.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTTTGGCTTA.................... 22 1 4.00 0.00 4.00 0.00 0.00 ..........................................................TCACTGGGTGAAGTTTGTCGTA.................... 22 1 4.00 0.00 4.00 0.00 0.00 ..........................................................GCACTGGGTGAGGTTTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00 ..........................................................GCACTGGGTGAAGTCTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00 ..........................................................GCAATGGGTGAAGTTTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00 ..........................................................GCACCGGGTGAAGTTTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00 ..........................................................GCATTGGGTGAAGTTTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00 ..........................................................GCACTGGATGAAGTTTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00 .........................................................AGCACTGGGTGAAGTTTGTCT...................... 21 1 3.00 0.00 3.00 0.00 0.00 ..........................................................GCACTGGGGGAAGTTTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00

droPer1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_2:8905688-8905793 +	64.14	AAGTTTGGAAT-------AGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGA-CGACC AAAAACGAACTATCTCGGAACTATTATACGATAAACTTTGTTCAGTTTTGCCAACTTGCTTG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTAAGCGATC Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo .................................................................GCACTGGGTGAAGTTTGTCTTA.................... 22 1 197.00 1.00 171.00 0.00 10.00 15.00 .................................................................GCACTGGGTGAAGTTTGTCTT..................... 21 1 47.00 1.00 38.00 0.00 2.00 6.00 .................................................................GCACTGGGTGAAGTTTGTCTTAA................... 23 1 21.00 1.00 18.00 0.00 2.00 0.00 .................................................................GCACTGGGTAAAGTTTGTCCTA.................... 22 1 17.00 11.00 6.00 0.00 0.00 0.00 .................................................................GCACTGGGTAAAGTTTGTCCT..................... 21 1 6.00 4.00 2.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCT...................... 20 1 5.00 0.00 2.00 0.00 2.00 1.00 ................................................................AGCACTGGGTGAAGTTTGTCTT..................... 22 1 4.00 0.00 3.00 0.00 0.00 1.00 .................................................................GCACTGGGTGCAGTTTGTCTTA.................... 22 1 3.00 0.00 3.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTATTA.................... 22 1 2.00 0.00 1.00 0.00 1.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCTTT.................... 22 1 2.00 0.00 2.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCTTAT................... 23 1 2.00 0.00 1.00 0.00 1.00 0.00 .................................................................GCACTGGGTGAAGCTTGTCTTA.................... 22 1 2.00 0.00 1.00 0.00 1.00 0.00 ............................CGATAAACTTTGTTCAGTTTTG......................................................... 22 1 2.00 0.00 2.00 0.00 0.00 0.00 .................................................................GCAATGGGTGAAGTTTGTCTTA.................... 22 1 2.00 0.00 2.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCTTAAA.................. 24 1 2.00 0.00 2.00 0.00 0.00 0.00 .................................................................GCACTAGGTGAAGTTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 ................................................................AGCACTGGGTGAATTTTGTCTT..................... 22 1 1.00 0.00 0.00 0.00 0.00 1.00 .................................................................GCACTGGGTGAAGTTTGTCTA..................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTAGGTGAAGTTTGTCTTAA................... 23 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGTAGTTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGAGAAGTTTGTCTTA.................... 22 1 1.00 0.00 0.00 0.00 1.00 0.00 .................................................................TCACTGGGTGAAGTTTGTCTTAA................... 23 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGCGAAGTTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGTGGTTTGTCTT..................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCTTTT................... 23 1 1.00 0.00 0.00 0.00 1.00 0.00 ................................................................AGCACTGGGTGAAGTTTGTCT...................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCC...................... 20 1 1.00 0.00 0.00 0.00 0.00 1.00 ...................................................................ACTGGGTGAAGTTTGTCTTA.................... 20 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCTTC.................... 22 1 1.00 0.00 0.00 0.00 1.00 0.00 .................................................................GCACTGGGTGAAGTTCGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCCTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................ACACTGGGTGAAGTTTGTCTT..................... 21 1 1.00 0.00 1.00 0.00 0.00 0.00 ............................CGATAAACTTTGTTCAGTTTT.......................................................... 21 1 1.00 0.00 0.00 0.00 0.00 1.00 .................................................................GAACTGGGTGAAGTTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAGGTTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGCAGCTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGAGTGAAGTTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGATTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTCTTG.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGGTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGGCGTTTGTCTTA.................... 22 1 1.00 0.00 0.00 0.00 1.00 0.00 .................................................................GCACTGGGTGAAGTTTGGCTTA.................... 22 1 1.00 0.00 0.00 0.00 1.00 0.00 .................................................................GCAATGGGTGCAGTTTGTCTTA.................... 22 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGAAGTTTGTC....................... 19 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTAAAGTTTGTCCTAT................... 23 1 1.00 0.00 1.00 0.00 0.00 0.00 .................................................................GCACTGGGTGATGTTTGGCT...................... 20 1 1.00 0.00 1.00 0.00 0.00 0.00

droWil1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_180701:1652063-1652174 -	54.43	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAAT----------------TTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC A--TTTCATATAAT-ATTATATGATAAACTTTGTTCAGTTTTGC-AATCAAAAAATCAAGAAAATTCCTTAGCATCACTGGGTGAAGTTTGTCTTATAATCTTTAAACTACAATC Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ..........................................................................TCACTGGGTGAAGTTTGTCTTA................... 22 2 6375.50 0.00 6367.50 7.50 0.50 ..........................................................................TCACTGGGTGAAGTTTGTCTTAA.................. 23 2 1737.50 0.00 1735.00 2.50 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTT.................... 21 2 582.50 0.00 582.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAAA................. 24 2 225.00 0.00 224.50 0.50 0.00 ............................................................................ACTGGGTGAAGTTTGTCTTA................... 20 2 45.50 0.00 45.50 0.00 0.00 ..........................................................................TCACTGGGCGAAGTTTGTCTTA................... 22 2 37.50 0.00 37.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAT.................. 23 2 35.50 0.00 35.50 0.00 0.00 ..................................................................CCTTAGCATCACTGGGTGAAG............................ 21 2 23.50 0.00 23.50 0.00 0.00 ..........................................................................TCACTTGGTGAAGTTTGTCTTA................... 22 2 21.00 0.00 21.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAAAA................ 25 2 19.00 0.00 19.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTT................... 22 2 17.50 0.00 17.50 0.00 0.00 ..........................................................................TCACTGTGTGAAGTTTGTCTTA................... 22 2 13.50 0.00 13.50 0.00 0.00 ............................................................................ACTGGGTGAAGTTTGTCTTAA.................. 21 2 13.00 0.00 13.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGCCTTA................... 22 2 11.50 0.00 11.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAC.................. 23 2 11.50 0.00 11.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTTTCTTA................... 22 2 11.00 0.00 11.00 0.00 0.00 ..........................................................................TAACTGGGTGAAGTTTGTCTTA................... 22 2 10.50 0.00 10.50 0.00 0.00 ..........................................................................TCACTGGGTTAAGTTTGTCTTA................... 22 2 10.50 0.00 10.50 0.00 0.00 .....................................................................TAGCATCACTGGGTGAAGTTTG........................ 22 2 10.00 0.00 10.00 0.00 0.00 ..................................................................CCTTAGCATCACTGGGTGAAGT........................... 22 2 9.00 0.00 9.00 0.00 0.00 ..........................................................................TCACTGGGGGAAGTTTGTCTTA................... 22 2 9.00 0.00 9.00 0.00 0.00 ..........................................................................TCACTGGGCGAAGTTTGTCTTAA.................. 23 2 8.50 0.00 8.50 0.00 0.00 ...........................................................................CACTGGGTGAAGTTTGTCTTA................... 21 2 7.50 0.00 7.50 0.00 0.00 ..........................................................................TCGCTGGGTGAAGTTTGTCTTA................... 22 2 7.00 0.00 7.00 0.00 0.00 ..........................................................................TCACTxGGTGAAGTTTGTCTTA................... 21 2 7.00 0.00 7.00 0.00 0.00 .....................TGATAAACTTTGTTCAGTTTT......................................................................... 21 2 7.00 0.00 7.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTCTGTCTTA................... 22 2 7.00 0.00 7.00 0.00 0.00 ..........................................................................TCACTGGGTGGAGTTTGTCTTA................... 22 2 7.00 0.00 7.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGCTTGTCTTA................... 22 2 7.00 0.00 7.00 0.00 0.00 ..........................................................................TCACCGGGTGAAGTTTGTCTTA................... 22 2 6.50 0.00 6.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGxTTGTCTTA................... 21 2 6.50 0.00 6.50 0.00 0.00 ..........................................................................TCACTAGGTGAAGTTTGTCTTA................... 22 2 6.50 0.00 6.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTATTA................... 22 2 6.50 0.00 6.50 0.00 0.00 .........................AAACTTTGTTCAGTTTTGC-AA.................................................................... 21 2 6.50 0.00 6.50 0.00 0.00 ..........................................................................TCACTGGGAGAAGTTTGTCTTA................... 22 2 6.50 0.00 6.50 0.00 0.00 ..........................................................................TCACTGGGTGAGGTTTGTCTTA................... 22 2 6.00 0.00 6.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTG................... 22 2 6.00 0.00 6.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAG.................. 23 2 6.00 0.00 6.00 0.00 0.00 ..........................................................................TCACTGGGCGAAGTTTGTCTT.................... 21 2 6.00 0.00 6.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCCTA................... 22 2 6.00 0.00 6.00 0.00 0.00 ..........................................................................TCAATGGGTGAAGTTTGTCTTA................... 22 2 6.00 0.00 6.00 0.00 0.00 ..........................................................................TCACTGGGTGAATTTTGTCTTA................... 22 2 6.00 0.00 6.00 0.00 0.00 .........................................................................CTCACTGGGTGAAGTTTGTCTTA................... 23 2 5.50 0.00 5.50 0.00 0.00 .....................................................................TAGCATCACTGGGTGAAGTTTGC....................... 23 2 5.00 0.00 5.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAAT................. 24 2 5.00 0.00 5.00 0.00 0.00 ..........................................................................TCACTGTGTGAAGTTTGTCTTAA.................. 23 2 5.00 0.00 5.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAAAAA............... 26 2 5.00 0.00 5.00 0.00 0.00 ..........................................................................CCACTGGGTGAAGTTTGTCTTA................... 22 2 5.00 0.00 5.00 0.00 0.00 ..........................................................................TCACTTGGTGAAGTTTGTCTTAA.................. 23 2 4.50 0.00 4.50 0.00 0.00 ..........................................................................TCACTGGATGAAGTTTGTCTTA................... 22 2 4.50 0.00 4.50 0.00 0.00 ..........................................................................TCACTGGCTGAAGTTTGTCTTA................... 22 2 4.50 0.00 4.50 0.00 0.00 ..........................................................................TCACTGGGTGCAGTTTGTCTTA................... 22 2 4.50 0.00 4.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTCTCTTA................... 22 2 4.50 0.00 4.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGCTTGTCTTAA.................. 23 2 4.50 0.00 4.50 0.00 0.00 ..........................................................................TAACTGGGTGAAGTTTGTCTTAA.................. 23 2 4.50 0.00 4.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTCGTCTTA................... 22 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTCA................... 22 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTGGGTTAAGTTTGTCTTAA.................. 23 2 4.00 0.00 4.00 0.00 0.00 .........................AAACTTTGTTCAGTTTTGC-AAT................................................................... 22 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTTGGTGAAGTTTGTCTT.................... 21 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTGGTTGAAGTTTGTCTTA................... 22 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCT..................... 20 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTGGGTAAAGTTTGTCTTA................... 22 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTGGGTGAACTTTGTCTTA................... 22 2 4.00 0.00 4.00 0.00 0.00 .....................................................................TAGCATCACTGGGTGAAGTTTGT....................... 23 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCCCTGGGTGAAGTTTGTCTTA................... 22 2 4.00 0.00 4.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTAA................... 22 2 3.50 0.00 3.50 0.00 0.00 ..........................................................................TCACTGGGTGACGTTTGTCTTA................... 22 2 3.50 0.00 3.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTA.................... 21 2 3.50 0.00 3.50 0.00 0.00 ....................................................................TTAGCATCACTGGGTGAAGTTTG........................ 23 2 3.50 0.00 3.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCCTAA.................. 23 2 3.50 0.00 3.50 0.00 0.00 ........................TAAACTTTGTTCAGTTTTGC-AA.................................................................... 22 2 3.50 0.00 3.50 0.00 0.00 ..........................................................................TCACTGGGTCAAGTTTGTCTTA................... 22 2 3.50 0.00 3.50 0.00 0.00 ............................................................................ACTGGGTGAAGTTTGTCTT.................... 19 2 3.50 0.00 3.50 0.00 0.00 ..........................................................................TCACTGAGTGAAGTTTGTCTTA................... 22 2 3.50 0.00 3.50 0.00 0.00 ..........................................................................TCACTCGGTGAAGTTTGTCTTA................... 22 2 3.00 0.00 3.00 0.00 0.00 ..........................................................................TCACTGGGTGGAGTTTGTCTTAA.................. 23 2 3.00 0.00 3.00 0.00 0.00 ...........................................................................CACTGGGTGAAGTTTGTCTTAA.................. 22 2 3.00 0.00 3.00 0.00 0.00 ..........................................................................TTACTGGGTGAAGTTTGTCTTA................... 22 2 3.00 0.00 3.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTATA................. 24 2 2.50 0.00 2.50 0.00 0.00 ..........................................................................TCACTGGGTGAGGTTTGTCTTAA.................. 23 2 2.50 0.00 2.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTTTCTTAA.................. 23 2 2.50 0.00 2.50 0.00 0.00 .....................TGATAAACTTTGTTCAGTTTTG........................................................................ 22 2 2.50 0.00 2.50 0.00 0.00 ..........................................................................TAACTGGGTGAAGTTTGTCTT.................... 21 2 2.50 0.00 2.50 0.00 0.00 ..........................................................................TCATTGGGTGAAGTTTGTCTTA................... 22 2 2.50 0.00 2.50 0.00 0.00 .........................................................................CTCACTGGGTGAAGTTTGTCTTAA.................. 24 2 2.50 0.00 2.50 0.00 0.00 ..........................................................................TCCCTGGGTGAAGTTTGTCTTAA.................. 23 2 2.50 0.00 2.50 0.00 0.00 .........................................................................ATCACTGGGTGAAGTTTGTCT..................... 21 2 2.50 0.00 2.50 0.00 0.00 ..........................................................................TCACTGGTTGAAGTTTGTCTTAA.................. 23 2 2.50 0.00 2.50 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTATTAA.................. 23 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................CCACTGGGTGAAGTTTGTCTTAA.................. 23 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................TCACTAGGTGAAGTTTGTCTTAA.................. 23 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................TCGCTGGGTGAAGTTTGTCTTAA.................. 23 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTCGTCTTAA.................. 23 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................TCACTGGGTGAACTTTGTCTTAA.................. 23 2 2.00 0.00 2.00 0.00 0.00 ....................................................................TTAGCATCACTGGGTGAAGTTTGT....................... 24 2 2.00 0.00 2.00 0.00 0.00 ....................................................................TTAGCATCACTGGGTGAAGTT.......................... 21 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTCTTAAG................. 24 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................TCTCTGGGTGAAGTTTGTCTTA................... 22 2 2.00 0.00 2.00 0.00 0.00 ..........................................................................TCACTGGGTGAAGTTTGTGTTA................... 22 2 2.00 0.00 2.00 0.00 0.00 .............................................................................CTGGGTGAAGTTTGTCTTAA.................. 20 2 1.50 0.00 1.50 0.00 0.00

droVir3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_12875:4111798-4111897 +	65.01	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAA-----TTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC TA-----TAACAAATATTATATGGTAAACTTTGTTCAGTTTTGCCAGGCTCTTTTTGTGCGCATCACTGGGTGAAGTTTGTCGTATAATCGCAAAAAGAACAGC Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ...............................................................TCACTGGGTGAAGTTTGTCGTA................... 22 1 2951.00 3.00 1.00 2947.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGTAA.................. 23 1 297.00 0.00 0.00 295.00 2.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGT.................... 21 1 235.00 3.00 1.00 231.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCTTA................... 22 1 38.00 0.00 0.00 38.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGTC................... 22 1 32.00 0.00 0.00 31.00 1.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGTAAA................. 24 1 26.00 1.00 1.00 24.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGTAT.................. 23 1 24.00 0.00 0.00 24.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTTTCGTA................... 22 1 20.00 0.00 0.00 20.00 0.00 0.00 .................................................................ACTGGGTGAAGTTTGTCGTA................... 20 1 20.00 0.00 0.00 20.00 0.00 0.00 ...............................................................TCACTGGGTGCAGTTTGTCGTA................... 22 1 18.00 0.00 0.00 18.00 0.00 0.00 ...............................................................TCACTGGGCGAAGTTTGTCGTA................... 22 1 17.00 0.00 0.00 17.00 0.00 0.00 ...............................................................TCACTGGGTGAAGGTTGTCGTA................... 22 1 13.00 0.00 0.00 13.00 0.00 0.00 ...............................................................TCACTGGGGGAAGTTTGTCGTA................... 22 1 13.00 0.00 0.00 13.00 0.00 0.00 ...............................................................TCACTGGGTGACGTTTGTCGTA................... 22 1 12.00 0.00 0.00 12.00 0.00 0.00 ...............................................................TCACTGGGTGAGGTTTGTCGTA................... 22 1 12.00 0.00 0.00 12.00 0.00 0.00 ...............................................................TCACTGGGTTAAGTTTGTCGTA................... 22 1 11.00 0.00 0.00 11.00 0.00 0.00 ...............................................................TCACTAGGTGAAGTTTGTCGTA................... 22 1 10.00 0.00 0.00 10.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGGCGTA................... 22 1 10.00 0.00 0.00 10.00 0.00 0.00 ...............................................................TCACTGTGTGAAGTTTGTCGTA................... 22 1 10.00 0.00 0.00 10.00 0.00 0.00 ...............................................................TCACTGGGTGAAGCTTGTCGTA................... 22 1 9.00 0.00 0.00 9.00 0.00 0.00 ...............................................................TCACTGGGTGAATTTTGTCGTA................... 22 1 9.00 0.00 0.00 9.00 0.00 0.00 ...............................................................TCACTTGGTGAAGTTTGTCGTA................... 22 1 8.00 0.00 0.00 8.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGGA................... 22 1 8.00 0.00 0.00 8.00 0.00 0.00 ...............................................................TCACTGGTTGAAGTTTGTCGTA................... 22 1 7.00 0.00 0.00 7.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTTTCTTA................... 22 1 7.00 0.00 0.00 7.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCCTA................... 22 1 7.00 0.00 0.00 7.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGTG................... 22 1 7.00 0.00 0.00 7.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCG..................... 20 1 7.00 0.00 0.00 7.00 0.00 0.00 ...........................................................................GTTTGTTATATAATCGCAAA......... 20 1 7.00 0.00 0.00 6.00 1.00 0.00 ...............................................................TCACTGGGTGTAGTTTGTCGTA................... 22 1 7.00 0.00 0.00 7.00 0.00 0.00 ...............................................................GCACTGGGTGAAGTTTGTCGTA................... 22 1 7.00 0.00 0.00 7.00 0.00 0.00 ...............................................................TCACTGGGTGGAGTTTGTCGTA................... 22 1 6.00 0.00 0.00 6.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGCA................... 22 1 6.00 0.00 0.00 6.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTCTCGTA................... 22 1 6.00 0.00 0.00 6.00 0.00 0.00 ...............................................................TCACTGGGTGAAGATTGTCGTA................... 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCACTGGGCGAAGTTTGGCGTA................... 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCACTGGGTCAAGTTTGTCGTA................... 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTAGTA................... 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCACTGGGTGAACTTTGTCGTA................... 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCTTAA.................. 23 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTTTCGT.................... 21 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGCCGTA................... 22 1 5.00 0.00 0.00 5.00 0.00 0.00 ..............................................................CTCACTGGGTGAAGTTTGTCGTA................... 23 1 5.00 0.00 0.00 5.00 0.00 0.00 ...............................................................TCCCTGGGTGAAGTTTGTCGTA................... 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGGGTTAAGTTTGTCGT.................... 21 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................CCACTGGGTGAAGTTTGTCGTA................... 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCGTCA.................. 23 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTATCGTA................... 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGAGTGAAGTTTGTCGTA................... 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTCGTCGTA................... 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGGGTTAAGTTTGTCTTA................... 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTGTCATA................... 22 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTTTTTCGTAA.................. 23 1 4.00 0.00 0.00 4.00 0.00 0.00 ...............................................................TCGCTGGGTGAAGTTTGTCGTA................... 22 1 3.00 0.00 0.00 3.00 0.00 0.00 ...........................................................................GTTTGTTATATAATCGCA........... 18 1 3.00 0.00 0.00 3.00 0.00 0.00 ...............................................................TCACTGGGTGGAGGTTGTCGTA................... 22 1 3.00 0.00 0.00 3.00 0.00 0.00 ...............................................................TCACTGGGTGAAGGTTGGCGTA................... 22 1 3.00 0.00 0.00 3.00 0.00 0.00 ...............................................................TCACTGGGTGCAGTTTGTCGTC................... 22 1 3.00 0.00 0.00 3.00 0.00 0.00 ...............................................................TCACTGGGCGAAGTTTGTCGTAA.................. 23 1 3.00 0.00 0.00 3.00 0.00 0.00 ...............................................................TCACTGGGTGAATTTTGTCGTAA.................. 23 1 3.00 0.00 0.00 3.00 0.00 0.00 ...............................................................TCACTGGGTGAAGTGTGTCGTA................... 22 1 3.00 0.00 0.00 3.00 0.00 0.00 ..............................................................ATCACTGGGTGAAGTTTGTCGT.................... 22 1 3.00 0.00 0.00 3.00 0.00 0.00

droMoj3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_6496:20937092-20937209 -	50.85	AAGTTTGGAATAGCA-ATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGC------CAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGA--------------CGACC TATACAAGAACAGAATATTATAAGGTAAACTTTGTTCAGTTTTGCCGGGTTCTATGTTGTGCGCATCACTGGGTGAAGTTTGTCGTATAATC--GAAACGAAACAGCAAGGAAAAAGTCC Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo .................................................................TCACTGGGTGAAGTTTGTCGTA................................. 22 1 2359.00 4.00 3.00 3.00 2349.00 .................................................................TCACTGGGTGAAGTTTGTCGT.................................. 21 1 300.00 5.00 2.00 2.00 291.00 .................................................................TCACTGGGTGAAGTTTGTCGTAA................................ 23 1 163.00 1.00 0.00 0.00 162.00 .................................................................TCACTGGGTGAAGTTTGTCGTC................................. 22 1 41.00 0.00 0.00 1.00 40.00 ...................................................................ACTGGGTGAAGTTTGTCGTA................................. 20 1 30.00 0.00 0.00 0.00 30.00 .................................................................TCACTGGGTGAAGTTTGTCG................................... 20 1 30.00 0.00 1.00 1.00 28.00 .................................................................TCACTGGGTGAAGTTTGTCGTAT................................ 23 1 20.00 0.00 0.00 0.00 20.00 .................................................................TCACTGGGTGCAGTTTGTCGTA................................. 22 1 17.00 0.00 1.00 0.00 16.00 .................................................................TCACTGGGTGACGTTTGTCGTA................................. 22 1 14.00 0.00 0.00 0.00 14.00 .................................................................GCACTGGGTGAAGTTTGTCTTA................................. 22 1 12.00 0.00 0.00 0.00 12.00 .................................................................TCACTGGGTGAAGTTTGTCGTAAA............................... 24 1 9.00 0.00 0.00 0.00 9.00 .................................................................TCACTGGGTGAAGTTTGCCGTA................................. 22 1 9.00 0.00 0.00 0.00 9.00 .................................................................TCACTGGGTGTAGTTTGTCGTA................................. 22 1 7.00 0.00 0.00 0.00 7.00 .................................................................TCACTGGGTGAAGCTTGTCGTA................................. 22 1 7.00 0.00 0.00 0.00 7.00 .................................................................TCACTGGGCGAAGTTTGTCGTA................................. 22 1 7.00 0.00 0.00 0.00 7.00 .................................................................TCACTGGGTGATGTTTGTCGTA................................. 22 1 6.00 0.00 0.00 0.00 6.00 .................................................................TCACTGGGGGAAGTTTGTCGTA................................. 22 1 6.00 0.00 0.00 0.00 6.00 ............................................CCGGGTTCTATGTTGTGCGCA....................................................... 21 1 5.00 0.00 0.00 0.00 5.00 .................................................................TCACTGGGTGAAGTTTGTCGTT................................. 22 1 5.00 0.00 0.00 0.00 5.00 .................................................................TCACTGGGTGAGGTTTGTCGTA................................. 22 1 5.00 0.00 0.00 0.00 5.00 .................................................................TCACTGGGTGAAGGTTGTCGTA................................. 22 1 4.00 0.00 0.00 0.00 4.00 .................................................................TCACTGGGTGGAGTTTGTCGTA................................. 22 1 4.00 0.00 0.00 0.00 4.00 ...................................................................ACTGGGTGAAGTTTGTCGT.................................. 19 1 4.00 0.00 0.00 0.00 4.00 .................................................................TCACTGGGTGAAGTTTGTCGTG................................. 22 1 4.00 0.00 0.00 0.00 4.00 .................................................................TAACTGGGTGAAGTTTGTCGTA................................. 22 1 4.00 0.00 0.00 0.00 4.00 .................................................................TCACTGGGTGAAGTTTGTTGTA................................. 22 1 4.00 0.00 0.00 0.00 4.00 .................................................................TCACTAGGTGAAGTTTGTCGTA................................. 22 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGTGAAGTTTGTCGCA................................. 22 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGAGTGAAGTTTGTCGTA................................. 22 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGTGAAGTTTGTCGGA................................. 22 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGATGAAGTTTGTCGTA................................. 22 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGTGTAGTTTGGCGTA................................. 22 1 3.00 0.00 0.00 0.00 3.00 ......................AGGTAAACTTTGTTCAGTTTTG............................................................................ 22 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGTGCAGTTTGTCGT.................................. 21 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGTGAAGTTTGTCGTCA................................ 23 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGAGAAGTTTGTCGTA................................. 22 1 3.00 0.00 0.00 0.00 3.00 ................................................................CTCACTGGGTGAAGTTTGTCGTA................................. 23 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGTGAAGTTTGTCGTAG................................ 23 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCACTGGGTGAAGTTTGTCTTA................................. 22 1 3.00 0.00 0.00 0.00 3.00 .................................................................TCGCTGGGTGAAGTTTGTCGTA................................. 22 1 3.00 0.00 0.00 0.00 3.00

droGri2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_5621:2511-2611 +	68.86	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAA-----TTTCCAAGC--CAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AAATATATAATTACA-TTATATGGCAAACCTTGTTCAGTTTTGACAACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAAT--CGAAATG--GATC Size Hit Count Total Norm V109 Male body
3	scaffold_15112:2109131-2109231 -	68.86	AAGTTTGGAATAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAA-----TTTCCAAGC--CAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACC AAATATATAATTACA-TTATATGGCAAACCTTGTTCAGTTTTGACAACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAAT--CGAAATG--GATC Size Hit Count Total Norm V109 Male body

Generated: 04/20/2012 at 05:32:55 EDT