Possible Orthologs for dme-mir-304

droSim1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrX_random:4023795-4023912 +	97.47	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..........................TAATCTCAATTTGTAAATGTGAG..................................................................... 23 2 537.00 322.00 59.50 124.00 31.50 ..........................TAATCTCAATTTGTAAATGTGA...................................................................... 22 2 266.00 19.00 92.50 144.00 10.50 ........................................................................CACTTTGCAATTGGAGATTGCT........................ 22 2 255.00 156.50 34.00 29.00 35.50 .......................................................................TCACTTTGCAATTGGAGATTG.......................... 21 2 149.50 0.50 72.50 69.00 7.50 ..........................TAATCTCAATTTGTAAATGTGG...................................................................... 22 2 46.00 0.00 13.50 29.50 3.00 .......................................................................TCACTTTGCAATTGGAGATTGCT........................ 23 2 32.00 10.00 10.00 5.00 7.00 ........................................................................CACTTTGCAATTGGAGATTGC......................... 21 2 27.00 4.50 10.00 3.00 9.50 ..........................TAATCTCAATTTGTAAATG......................................................................... 19 2 26.50 0.00 12.00 13.00 1.50 ..........................TAATCTCAATTTGTAAATGTG....................................................................... 21 2 23.00 0.00 13.00 9.00 1.00 .................................................CGGTTTGAGCCATTTGACGCACT.............................................. 23 2 16.00 0.00 4.00 4.50 7.50 ..........................TAATCTCAATTTGTAAATGTGAGA.................................................................... 24 2 13.00 2.00 4.50 5.50 1.00 .......................................................................TCACTTTGCAATTGGAGATTGC......................... 22 2 11.00 0.50 5.50 3.50 1.50 ........................................................................CACTTTGCAATTGGAGATTGCC........................ 22 2 10.00 0.50 5.00 1.00 3.50 ..........................TAATCTCAATTTGTAAATGT........................................................................ 20 2 8.00 0.00 5.50 2.50 0.00 ..........................TAATCTCAATTTGTAAATGTGAGT.................................................................... 24 2 7.50 0.50 4.00 3.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAC..................................................................... 23 2 7.50 0.50 2.00 4.00 1.00 .......................................................................TCACTTTGCAATTGGAGATTGT......................... 22 2 7.00 0.00 2.50 3.50 1.00 ........................................................................CACTTTGCAATTGGAGATTG.......................... 20 2 5.00 0.50 2.00 2.50 0.00 .......................................................................TCACTTTGCAATTGGAGATTGTT........................ 23 2 4.50 0.00 2.50 2.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGTT........................ 22 2 4.50 0.50 1.50 1.50 1.00 ..............................CTCAATTTGTAAATGTGA...................................................................... 18 2 3.50 1.50 1.00 1.00 0.00 .........................................................................ACTTTGCAATTGGAGATTG.......................... 19 2 3.00 0.00 1.00 2.00 0.00 .......................................................................TCACTTTGCAATTGGGGATTG.......................... 21 2 3.00 0.00 2.50 0.50 0.00 ........................................................................CACTTTGCAATTGGAGATTGCG........................ 22 2 3.00 0.50 1.00 0.50 1.00 ..........................TAATCTCAATTTGTAAATGTTAG..................................................................... 23 2 3.00 3.00 0.00 0.00 0.00 .......................................................................TCACTTTGCAATTGGAGATTGA......................... 22 2 3.00 0.00 1.00 2.00 0.00 ..........................TAATATCAATTTGTAAATGTGAG..................................................................... 23 2 2.50 2.50 0.00 0.00 0.00 ........................................................................CACTTTGCAATTGGAGCTTGCT........................ 22 2 2.50 2.50 0.00 0.00 0.00 .......................................................................TCACTTTGCAATTGGAGATTGCC........................ 23 2 2.50 0.00 1.00 1.00 0.50 ..........................TAATCTCAATTTGTAAATGTGAT..................................................................... 23 2 2.00 1.00 0.50 0.50 0.00 ...........................AATCTCAATTTGTAAATGTGAG..................................................................... 22 2 2.00 0.50 1.00 0.50 0.00 .................................................CGGTTTGAGCCATTTGACGCACC.............................................. 23 2 2.00 0.00 0.00 1.50 0.50 .........................................................................ACTTTGCAATTGGAGATTGCTC....................... 22 2 2.00 0.00 0.50 0.50 1.00 ........................................................................CACTTTGCAATTGGAGATTGTA........................ 22 2 2.00 0.00 1.00 1.00 0.00 ........................................................................CACTTTGCAATTGGAGGTTGCT........................ 22 2 2.00 2.00 0.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAGC.................................................................... 24 2 1.50 0.50 0.50 0.50 0.00 ........................................................................CACTTTTCAATTGGAGATTGCT........................ 22 2 1.50 0.00 0.00 0.50 1.00 .........................................................................ACTTTGCAATTGGAGATTGCT........................ 21 2 1.50 1.00 0.50 0.00 0.00 ........................................................................CACTTTCCAATTGGAGATTGCT........................ 22 2 1.50 0.00 0.00 0.00 1.50 ..........................TAATCTCAATTTGTAAATGTGAGG.................................................................... 24 2 1.50 0.00 0.50 1.00 0.00 ........................................................................CACTTTGCAATTGGCGATTGCT........................ 22 2 1.50 1.50 0.00 0.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGCTT....................... 23 2 1.50 0.00 0.50 1.00 0.00 ..........................TAGTCTCAATTTGTAAATGTGAG..................................................................... 23 2 1.50 1.00 0.00 0.50 0.00 ..........................TAATCTCAATTTGTAAATGTGGG..................................................................... 23 2 1.50 0.00 0.50 0.50 0.50 ..........................TAATCTCAATTTGTAAATGTAAG..................................................................... 23 2 1.50 1.50 0.00 0.00 0.00 .............................TCTCAATTTGTAAATGTGAGC.................................................................... 21 2 1.50 0.00 1.50 0.00 0.00 ..........................TAATCTCAATTTTTAAATGTGA...................................................................... 22 2 1.50 0.00 0.50 0.00 1.00 ....................................................................CACTCACTTTGCAATTGGAG.............................. 20 2 1.50 0.00 1.00 0.50 0.00 ........................................................................CACTTTGCAATTGGGGATTGCT........................ 22 2 1.50 0.50 1.00 0.00 0.00
2	chrX_random:4023816-4023915 +	40.05	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT--- ---------------------TTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATTATT Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ..........................TAATCTCAATTTGTAAATGTGAG........................................................................ 23 2 537.00 322.00 59.50 124.00 31.50 ..........................TAATCTCAATTTGTAAATGTGA......................................................................... 22 2 266.00 19.00 92.50 144.00 10.50 ........................................................................CACTTTGCAATTGGAGATTGCT........................... 22 2 255.00 156.50 34.00 29.00 35.50 .......................................................................TCACTTTGCAATTGGAGATTG............................. 21 2 149.50 0.50 72.50 69.00 7.50 ..........................TAATCTCAATTTGTAAATGTGG......................................................................... 22 2 46.00 0.00 13.50 29.50 3.00 .......................................................................TCACTTTGCAATTGGAGATTGCT........................... 23 2 32.00 10.00 10.00 5.00 7.00 ........................................................................CACTTTGCAATTGGAGATTGC............................ 21 2 27.00 4.50 10.00 3.00 9.50 ..........................TAATCTCAATTTGTAAATG............................................................................ 19 2 26.50 0.00 12.00 13.00 1.50 ..........................TAATCTCAATTTGTAAATGTG.......................................................................... 21 2 23.00 0.00 13.00 9.00 1.00 .................................................CGGTTTGAGCCATTTGACGCACT................................................. 23 2 16.00 0.00 4.00 4.50 7.50 ..........................TAATCTCAATTTGTAAATGTGAGA....................................................................... 24 2 13.00 2.00 4.50 5.50 1.00 .......................................................................TCACTTTGCAATTGGAGATTGC............................ 22 2 11.00 0.50 5.50 3.50 1.50 ........................................................................CACTTTGCAATTGGAGATTGCC........................... 22 2 10.00 0.50 5.00 1.00 3.50 ..........................TAATCTCAATTTGTAAATGT........................................................................... 20 2 8.00 0.00 5.50 2.50 0.00 ..........................TAATCTCAATTTGTAAATGTGAGT....................................................................... 24 2 7.50 0.50 4.00 3.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAC........................................................................ 23 2 7.50 0.50 2.00 4.00 1.00 .......................................................................TCACTTTGCAATTGGAGATTGT............................ 22 2 7.00 0.00 2.50 3.50 1.00 ........................................................................CACTTTGCAATTGGAGATTG............................. 20 2 5.00 0.50 2.00 2.50 0.00 ........................................................................CACTTTGCAATTGGAGATTGTT........................... 22 2 4.50 0.50 1.50 1.50 1.00 .......................................................................TCACTTTGCAATTGGAGATTGTT........................... 23 2 4.50 0.00 2.50 2.00 0.00 ..............................CTCAATTTGTAAATGTGA......................................................................... 18 2 3.50 1.50 1.00 1.00 0.00 .......................................................................TCACTTTGCAATTGGAGATTGA............................ 22 2 3.00 0.00 1.00 2.00 0.00 .......................................................................TCACTTTGCAATTGGGGATTG............................. 21 2 3.00 0.00 2.50 0.50 0.00 .........................................................................ACTTTGCAATTGGAGATTG............................. 19 2 3.00 0.00 1.00 2.00 0.00 ..........................TAATCTCAATTTGTAAATGTTAG........................................................................ 23 2 3.00 3.00 0.00 0.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGCG........................... 22 2 3.00 0.50 1.00 0.50 1.00 .......................................................................TCACTTTGCAATTGGAGATTGCC........................... 23 2 2.50 0.00 1.00 1.00 0.50 ..........................TAATATCAATTTGTAAATGTGAG........................................................................ 23 2 2.50 2.50 0.00 0.00 0.00 ........................................................................CACTTTGCAATTGGAGCTTGCT........................... 22 2 2.50 2.50 0.00 0.00 0.00 .........................................................................ACTTTGCAATTGGAGATTGCTC.......................... 22 2 2.00 0.00 0.50 0.50 1.00 ........................................................................CACTTTGCAATTGGAGGTTGCT........................... 22 2 2.00 2.00 0.00 0.00 0.00 ...........................AATCTCAATTTGTAAATGTGAG........................................................................ 22 2 2.00 0.50 1.00 0.50 0.00 ..........................TAATCTCAATTTGTAAATGTGAT........................................................................ 23 2 2.00 1.00 0.50 0.50 0.00 .................................................CGGTTTGAGCCATTTGACGCACC................................................. 23 2 2.00 0.00 0.00 1.50 0.50 ........................................................................CACTTTGCAATTGGAGATTGTA........................... 22 2 2.00 0.00 1.00 1.00 0.00 .............................TCTCAATTTGTAAATGTGAGC....................................................................... 21 2 1.50 0.00 1.50 0.00 0.00 ........................................................................CACTTTGCAATTGGGGATTGCT........................... 22 2 1.50 0.50 1.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAGC....................................................................... 24 2 1.50 0.50 0.50 0.50 0.00 ....................................................................CACTCACTTTGCAATTGGAG................................. 20 2 1.50 0.00 1.00 0.50 0.00 ..........................TAATCTCAATTTGTAAATGTGAGG....................................................................... 24 2 1.50 0.00 0.50 1.00 0.00 ..........................TAATCTCAATTTTTAAATGTGA......................................................................... 22 2 1.50 0.00 0.50 0.00 1.00 ..........................TAGTCTCAATTTGTAAATGTGAG........................................................................ 23 2 1.50 1.00 0.00 0.50 0.00 ..........................TAATCTCAATTTGTAAATGTAAG........................................................................ 23 2 1.50 1.50 0.00 0.00 0.00 ........................................................................CACTTTCCAATTGGAGATTGCT........................... 22 2 1.50 0.00 0.00 0.00 1.50 ..........................TAATCTCAATTTGTAAATGTGGG........................................................................ 23 2 1.50 0.00 0.50 0.50 0.50 .........................................................................ACTTTGCAATTGGAGATTGCT........................... 21 2 1.50 1.00 0.50 0.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGCTT.......................... 23 2 1.50 0.00 0.50 1.00 0.00 ........................................................................CACTTTGCAATTGGCGATTGCT........................... 22 2 1.50 1.50 0.00 0.00 0.00 ........................................................................CACTTTTCAATTGGAGATTGCT........................... 22 2 1.50 0.00 0.00 0.50 1.00

droSec1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_73:137399-137516 +	97.47	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................TAATCTCAATTTGTAAATGTGAG..................................................................... 23 3 2160.00 683.33 1030.00 446.67 ........................................................................CACTTTGCAATTGGAGATTGCT........................ 22 3 1833.00 872.00 839.33 121.67 ..........................TAATCTCAATTTGTAAATGTGA...................................................................... 22 3 119.67 53.67 23.33 42.67 ..........................TAATCTCAATTTGTAAATGTGAGT.................................................................... 24 3 93.00 67.67 7.00 18.33 .......................................................................TCACTTTGCAATTGGAGATTGCT........................ 23 3 86.33 50.67 23.67 12.00 ........................................................................CACTTTGCAATTGGAGATTGC......................... 21 3 57.00 20.00 32.33 4.67 .......................................................................TCACTTTGCAATTGGAGATTG.......................... 21 3 45.33 27.33 8.67 9.33 .......................................................................TCACTTTGCAATTGGAGATTGC......................... 22 3 24.00 11.00 10.00 3.00 .........................................................................ACTTTGCAATTGGAGATTGCT........................ 21 3 13.67 11.67 1.33 0.67 ........................................................................CACTTTGCAATTGGAGATTG.......................... 20 3 12.67 9.67 1.33 1.67 ..........................TAATCTCAATTTGTAAATGT........................................................................ 20 3 9.67 7.33 1.33 1.00 ..........................TAATCTTAATTTGTAAATGTGAG..................................................................... 23 3 7.67 0.33 7.00 0.33 ..........................TAATCTCAATTTGTAAATGTGAGA.................................................................... 24 3 7.33 2.33 3.00 2.00 ..........................TAATCTCAATTTGTAAATATGAG..................................................................... 23 3 7.00 4.33 2.00 0.67 ........................................................................CACTTTGCAATTGGAGATTGCTT....................... 23 3 7.00 6.33 0.00 0.67 ..........................TAATCTCAATTTGTAAATGTGAGC.................................................................... 24 3 6.67 2.67 2.67 1.33 ........................................................................CACTTTGCAATTGGAGATAGCT........................ 22 3 6.33 6.00 0.00 0.33 ........................................................................CACTTTGCAATTGGAGATCGCT........................ 22 3 6.33 6.00 0.33 0.00 ..........................TAATCTCAATTTGTAAATGTGT...................................................................... 22 3 6.00 5.33 0.00 0.67 ..........................TAATCTCAATTTGTAAATCTGAG..................................................................... 23 3 6.00 5.00 0.67 0.33 ..........................TAATTTCAATTTGTAAATGTGAG..................................................................... 23 3 5.67 0.00 4.67 1.00 ..........................TAATCTCAATTTGTAAATTTGAG..................................................................... 23 3 5.33 4.33 0.67 0.33 ..........................TAATCTCAATTTGTxAATGTGAG..................................................................... 22 3 5.33 0.67 4.00 0.67 ..........................TAATCTCAATTTGTAAATGTGAA..................................................................... 23 3 5.33 1.67 1.33 2.33 .......................................................................TCACTTTGCAATTGGAGATTGT......................... 22 3 5.00 4.00 0.67 0.33 ..........................TAATCTCxATTTGTAAATGTGAG..................................................................... 22 3 4.67 0.00 3.67 1.00 ........................................................................CACTTTGCAATTGGAGATTGTT........................ 22 3 4.67 2.33 2.00 0.33 ..........................TAATCTCAATTTGTAAATGTG....................................................................... 21 3 4.33 2.33 0.00 2.00 ........................................................................CACTTTGCAATTGGGGATTGCT........................ 22 3 4.00 1.00 2.67 0.33 ...........................AATCTCAATTTGTAAATGTGAG..................................................................... 22 3 3.67 2.00 1.33 0.33 ........................................................................CACTTTGCAATTGGAGGTTGCT........................ 22 3 3.67 1.67 1.67 0.33 ........................................................................CACTTTGCAACTGGAGATTGCT........................ 22 3 3.33 2.67 0.67 0.00 ........................................................................CACxTTGCAATTGGAGATTGCT........................ 21 3 3.33 0.67 2.67 0.00 .......TTGTATCTGCAGCATTGAA............................................................................................ 19 2 5.00 0.00 5.00 0.00 ........................................................................CACTTTGCAATTGGCGATTGCT........................ 22 3 3.33 1.00 2.00 0.33 ..........................TAATCTCAACTTGTAAATGTGAG..................................................................... 23 3 3.00 1.00 1.33 0.67 ..........................TAATCTAAATTTGTAAATGTGAG..................................................................... 23 3 3.00 0.33 0.33 2.33 ........................................................................CACTTTGCAATTGGAGACTGCT........................ 22 3 3.00 1.00 2.00 0.00 .......................................................................TCACTTTGCAATTGGAGATTGA......................... 22 3 3.00 2.00 0.00 1.00 ........................................................................CGCTTTGCAATTGGAGATTGCT........................ 22 3 2.67 1.00 1.00 0.67 ..........................TAACCTCAATTTGTAAATGTGAG..................................................................... 23 3 2.67 0.33 2.00 0.33 ......................................................................CTCACTTTGCAATTGGAGATTG.......................... 22 3 2.67 2.00 0.33 0.33 .............................TCTCAATTTGTAAATGTGAGCGG.................................................................. 23 3 2.67 0.67 1.33 0.67 ..........................TAATCTCAATCTGTAAATGTGAG..................................................................... 23 3 2.67 1.00 1.33 0.33 ........................................................................CACTTTGCAATTGGAGATGGCT........................ 22 3 2.67 2.33 0.00 0.33 ........................................................................CACTTTGCAATTGGAGATTGCC........................ 22 3 2.33 0.33 1.33 0.67 ..........................TGATCTCAATTTGTAAATGTGAG..................................................................... 23 3 2.33 0.00 2.33 0.00 ..........................TAATCTCAATTTGTAAATGTGGG..................................................................... 23 3 2.33 0.33 1.33 0.67 ...............................TCAATTTGTAAATGTGAGCGGTTT............................................................... 24 3 2.33 0.00 2.00 0.33 ..........................................................................CTTTGCAATTGGAGATTGCT........................ 20 3 2.33 1.00 0.67 0.67 ........................................................................TACTTTGCAATTGGAGATTGCT........................ 22 3 2.33 0.67 1.67 0.00 .........................CTAATCTCAATTTGTAAATGTGAG..................................................................... 24 3 2.33 0.00 1.67 0.67 ..........................TAATCTCCATTTGTAAATGTGAG..................................................................... 23 3 2.00 1.00 1.00 0.00 ..........................TAATCTCAATTTGTxxATGTGAG..................................................................... 21 3 2.00 1.00 1.00 0.00 ..........................TAATCTCAATTTGTAAGTGTGAG..................................................................... 23 3 2.00 0.00 2.00 0.00 ........................................................................CACTTTGTAATTGGAGATTGCT........................ 22 3 2.00 1.00 1.00 0.00 ..........................TAATCTCAATTTGTAAATGTAAG..................................................................... 23 3 2.00 1.00 0.33 0.67 ..........................TAATCCCAATTTGTAAATGTGAG..................................................................... 23 3 2.00 1.00 0.67 0.33 ............................ATCTCAATTTGTAAATGTGAG..................................................................... 21 3 2.00 0.00 1.67 0.33 ........................................................................CACTTCGCAATTGGAGATTGCT........................ 22 3 2.00 0.67 1.00 0.33 ..........................TAATCTCGATTTGTAAATGTGAG..................................................................... 23 3 2.00 1.00 1.00 0.00 ..........................TAATCTCAATTTGTAGATGTGAG..................................................................... 23 3 1.67 0.33 1.00 0.33 ........................................................................CACTTTGCACTTGGAGATTGCT........................ 22 3 1.67 1.00 0.67 0.00 ........................................................................CACTTTGCAATTGGAGATTGCA........................ 22 3 1.67 1.33 0.33 0.00 ........................................................................CACTTTCCAATTGGAGATTGCT........................ 22 3 1.67 0.67 1.00 0.00 ........................................................................CACTTTGCGATTGGAGATTGCT........................ 22 3 1.67 1.00 0.67 0.00 ..........................TAATCTCAATTTGTAAATGTGCG..................................................................... 23 3 1.67 1.00 0.33 0.33 ..........................TAGTCTCAATTTGTAAATGTGAG..................................................................... 23 3 1.67 0.00 1.00 0.67 ..........................TAATCTCAATTTGTAAATGCGAG..................................................................... 23 3 1.67 0.33 0.67 0.67 ........................................................................CACCTTGCAATTGGAGATTGCT........................ 22 3 1.67 1.00 0.67 0.00 ........................................................................CACTTTGCAATTGCAGATTGCT........................ 22 3 1.33 0.33 1.00 0.00 ..........................TAATCTCAATTCGTAAATGTGAG..................................................................... 23 3 1.33 0.33 0.67 0.33 .......................................................................TCACTTTGCAATTGGAGATT........................... 20 3 1.33 1.00 0.00 0.33 ........................................................................CACTTTGAAATTGGAGATTGCT........................ 22 3 1.33 0.33 0.00 1.00 ........................................................................CACTTTGCAATTGGAGCTTGCT........................ 22 3 1.33 0.67 0.33 0.33 ..........................TAATCTCAATTTGTAAATGAGAG..................................................................... 23 3 1.33 0.33 0.33 0.67 ........................................................................CACTTTGCAATTGGAGATTTCT........................ 22 3 1.33 1.00 0.33 0.00 ..........................TAATCTCAATTTGTGAATGTGAG..................................................................... 23 3 1.33 0.33 0.33 0.67 ..........................TAATCTCAATTTCTAAATGTGAG..................................................................... 23 3 1.33 0.33 0.67 0.33 ........................................................................CACTTTGCxATTGGAGATTGCT........................ 21 3 1.33 0.00 1.33 0.00 ..........................TAATCTCAATTTGTAAATGTGAGTT................................................................... 25 3 1.33 1.00 0.00 0.33 ..........................TAATCTCAATTTGTAAATGTGAC..................................................................... 23 3 1.33 0.33 1.00 0.00 ..........................TAATCTCAATTTGTCAATGTGAG..................................................................... 23 3 1.33 0.00 1.00 0.33 ..........................TAATCTCAATTTGTAAATGTTAG..................................................................... 23 3 1.33 0.33 0.33 0.67 ..........................TAATCTCAAATTGTAAATGTGAG..................................................................... 23 3 1.33 0.00 1.00 0.33 ...............................TCAATTTGTAAATGTGAG..................................................................... 18 3 1.33 0.00 1.00 0.33 ........................................................................CACTTTGCAATTGxxGATTGCT........................ 20 3 1.33 0.67 0.67 0.00 ......................................................................CTCACTTTGCAATTGGAGATTGCT........................ 24 3 1.33 0.33 0.67 0.33 ..........................TAATCTCAATTTGTAACTGTGAG..................................................................... 23 3 1.00 0.67 0.33 0.00 ..................................................................CGCACTCACTTTGCAATTGGAG.............................. 22 3 1.00 0.00 1.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGT......................... 21 3 1.00 0.33 0.33 0.33 ........................................................................CACTTTTCAATTGGAGATTGCT........................ 22 3 1.00 1.00 0.00 0.00 ..........................TAATCTCAATTTGTTAATGTGAG..................................................................... 23 3 1.00 0.33 0.67 0.00 ..............................CTCAATTTGTAAATGTGAG..................................................................... 19 3 1.00 0.67 0.33 0.00 ..........................TAATCTCATTTTGTAAATGTGAG..................................................................... 23 3 1.00 0.00 1.00 0.00 .........................................................................ACTTTGCAATTGGAGATTG.......................... 19 3 1.00 1.00 0.00 0.00 ........................................................................CCCTTTGCAATTGGAGATTGCT........................ 22 3 1.00 0.33 0.67 0.00 ..........................TAATCTCACTTTGTAAATGTGAG..................................................................... 23 3 1.00 0.33 0.33 0.33 ..........................TAATCTCAATTTGTAAATGTCAG..................................................................... 23 3 1.00 0.67 0.00 0.33 ......................................................................CTCACTTTGCAATTGGAGATTGC......................... 23 3 1.00 0.33 0.67 0.00 .................................................CGGTTTGAGCCATTTGACGCACT.............................................. 23 3 1.00 0.33 0.67 0.00
2	super_73:137393-137505 +	49.49	------GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT AAACCAGTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCA----------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ................................TAATCTCAATTTGTAAATGTGAG..................................................................... 23 3 2160.00 683.33 1030.00 446.67 ..............................................................................CACTTTGCAATTGGAGATTGCT........................ 22 3 1833.00 872.00 839.33 121.67 ................................TAATCTCAATTTGTAAATGTGA...................................................................... 22 3 119.67 53.67 23.33 42.67 ................................TAATCTCAATTTGTAAATGTGAGT.................................................................... 24 3 93.00 67.67 7.00 18.33 .............................................................................TCACTTTGCAATTGGAGATTGCT........................ 23 3 86.33 50.67 23.67 12.00 ..............................................................................CACTTTGCAATTGGAGATTGC......................... 21 3 57.00 20.00 32.33 4.67 .............................................................................TCACTTTGCAATTGGAGATTG.......................... 21 3 45.33 27.33 8.67 9.33 .............................................................................TCACTTTGCAATTGGAGATTGC......................... 22 3 24.00 11.00 10.00 3.00 ...............................................................................ACTTTGCAATTGGAGATTGCT........................ 21 3 13.67 11.67 1.33 0.67 ..............................................................................CACTTTGCAATTGGAGATTG.......................... 20 3 12.67 9.67 1.33 1.67 ................................TAATCTCAATTTGTAAATGT........................................................................ 20 3 9.67 7.33 1.33 1.00 ................................TAATCTTAATTTGTAAATGTGAG..................................................................... 23 3 7.67 0.33 7.00 0.33 ................................TAATCTCAATTTGTAAATGTGAGA.................................................................... 24 3 7.33 2.33 3.00 2.00 ................................TAATCTCAATTTGTAAATATGAG..................................................................... 23 3 7.00 4.33 2.00 0.67 ..............................................................................CACTTTGCAATTGGAGATTGCTT....................... 23 3 7.00 6.33 0.00 0.67 ................................TAATCTCAATTTGTAAATGTGAGC.................................................................... 24 3 6.67 2.67 2.67 1.33 ..............................................................................CACTTTGCAATTGGAGATCGCT........................ 22 3 6.33 6.00 0.33 0.00 ..............................................................................CACTTTGCAATTGGAGATAGCT........................ 22 3 6.33 6.00 0.00 0.33 ................................TAATCTCAATTTGTAAATCTGAG..................................................................... 23 3 6.00 5.00 0.67 0.33 ................................TAATCTCAATTTGTAAATGTGT...................................................................... 22 3 6.00 5.33 0.00 0.67 ................................TAATTTCAATTTGTAAATGTGAG..................................................................... 23 3 5.67 0.00 4.67 1.00 ................................TAATCTCAATTTGTxAATGTGAG..................................................................... 22 3 5.33 0.67 4.00 0.67 ................................TAATCTCAATTTGTAAATGTGAA..................................................................... 23 3 5.33 1.67 1.33 2.33 ................................TAATCTCAATTTGTAAATTTGAG..................................................................... 23 3 5.33 4.33 0.67 0.33 .............................................................................TCACTTTGCAATTGGAGATTGT......................... 22 3 5.00 4.00 0.67 0.33 ..............................................................................CACTTTGCAATTGGAGATTGTT........................ 22 3 4.67 2.33 2.00 0.33 ................................TAATCTCxATTTGTAAATGTGAG..................................................................... 22 3 4.67 0.00 3.67 1.00 ................................TAATCTCAATTTGTAAATGTG....................................................................... 21 3 4.33 2.33 0.00 2.00 ..............................................................................CACTTTGCAATTGGGGATTGCT........................ 22 3 4.00 1.00 2.67 0.33 ..............................................................................CACTTTGCAATTGGAGGTTGCT........................ 22 3 3.67 1.67 1.67 0.33 .................................AATCTCAATTTGTAAATGTGAG..................................................................... 22 3 3.67 2.00 1.33 0.33 ..............................................................................CACTTTGCAACTGGAGATTGCT........................ 22 3 3.33 2.67 0.67 0.00 ..............................................................................CACTTTGCAATTGGCGATTGCT........................ 22 3 3.33 1.00 2.00 0.33 .............TTGTATCTGCAGCATTGAA............................................................................................ 19 2 5.00 0.00 5.00 0.00 ..............................................................................CACxTTGCAATTGGAGATTGCT........................ 21 3 3.33 0.67 2.67 0.00 ..............................................................................CACTTTGCAATTGGAGACTGCT........................ 22 3 3.00 1.00 2.00 0.00 ................................TAATCTAAATTTGTAAATGTGAG..................................................................... 23 3 3.00 0.33 0.33 2.33 .............................................................................TCACTTTGCAATTGGAGATTGA......................... 22 3 3.00 2.00 0.00 1.00 ................................TAATCTCAACTTGTAAATGTGAG..................................................................... 23 3 3.00 1.00 1.33 0.67 ...................................TCTCAATTTGTAAATGTGAGCGG.................................................................. 23 3 2.67 0.67 1.33 0.67 ..............................................................................CGCTTTGCAATTGGAGATTGCT........................ 22 3 2.67 1.00 1.00 0.67 ................................TAACCTCAATTTGTAAATGTGAG..................................................................... 23 3 2.67 0.33 2.00 0.33 ..............................................................................CACTTTGCAATTGGAGATGGCT........................ 22 3 2.67 2.33 0.00 0.33 ............................................................................CTCACTTTGCAATTGGAGATTG.......................... 22 3 2.67 2.00 0.33 0.33 ................................TAATCTCAATCTGTAAATGTGAG..................................................................... 23 3 2.67 1.00 1.33 0.33 ................................................................................CTTTGCAATTGGAGATTGCT........................ 20 3 2.33 1.00 0.67 0.67 ................................TAATCTCAATTTGTAAATGTGGG..................................................................... 23 3 2.33 0.33 1.33 0.67 ..............................................................................CACTTTGCAATTGGAGATTGCC........................ 22 3 2.33 0.33 1.33 0.67 ...............................CTAATCTCAATTTGTAAATGTGAG..................................................................... 24 3 2.33 0.00 1.67 0.67 ................................TGATCTCAATTTGTAAATGTGAG..................................................................... 23 3 2.33 0.00 2.33 0.00 .....................................TCAATTTGTAAATGTGAGCGGTTT............................................................... 24 3 2.33 0.00 2.00 0.33 ..............................................................................TACTTTGCAATTGGAGATTGCT........................ 22 3 2.33 0.67 1.67 0.00 ................................TAATCTCCATTTGTAAATGTGAG..................................................................... 23 3 2.00 1.00 1.00 0.00 ................................TAATCCCAATTTGTAAATGTGAG..................................................................... 23 3 2.00 1.00 0.67 0.33 ................................TAATCTCGATTTGTAAATGTGAG..................................................................... 23 3 2.00 1.00 1.00 0.00 ................................TAATCTCAATTTGTxxATGTGAG..................................................................... 21 3 2.00 1.00 1.00 0.00 ..............................................................................CACTTCGCAATTGGAGATTGCT........................ 22 3 2.00 0.67 1.00 0.33 ..............................................................................CACTTTGTAATTGGAGATTGCT........................ 22 3 2.00 1.00 1.00 0.00 ................................TAATCTCAATTTGTAAGTGTGAG..................................................................... 23 3 2.00 0.00 2.00 0.00 ................................TAATCTCAATTTGTAAATGTAAG..................................................................... 23 3 2.00 1.00 0.33 0.67 ..................................ATCTCAATTTGTAAATGTGAG..................................................................... 21 3 2.00 0.00 1.67 0.33 ..............................................................................CACTTTGCGATTGGAGATTGCT........................ 22 3 1.67 1.00 0.67 0.00 ................................TAGTCTCAATTTGTAAATGTGAG..................................................................... 23 3 1.67 0.00 1.00 0.67 ..............................................................................CACCTTGCAATTGGAGATTGCT........................ 22 3 1.67 1.00 0.67 0.00 ..............................................................................CACTTTGCACTTGGAGATTGCT........................ 22 3 1.67 1.00 0.67 0.00 ................................TAATCTCAATTTGTAGATGTGAG..................................................................... 23 3 1.67 0.33 1.00 0.33 ..............................................................................CACTTTGCAATTGGAGATTGCA........................ 22 3 1.67 1.33 0.33 0.00 ................................TAATCTCAATTTGTAAATGTGCG..................................................................... 23 3 1.67 1.00 0.33 0.33 ................................TAATCTCAATTTGTAAATGCGAG..................................................................... 23 3 1.67 0.33 0.67 0.67 ..............................................................................CACTTTCCAATTGGAGATTGCT........................ 22 3 1.67 0.67 1.00 0.00 ..............................................................................CACTTTGCAATTGxxGATTGCT........................ 20 3 1.33 0.67 0.67 0.00 .............................................................................TCACTTTGCAATTGGAGATT........................... 20 3 1.33 1.00 0.00 0.33 ................................TAATCTCAAATTGTAAATGTGAG..................................................................... 23 3 1.33 0.00 1.00 0.33 ..............................................................................CACTTTGCAATTGGAGCTTGCT........................ 22 3 1.33 0.67 0.33 0.33 ..............................................................................CACTTTGCAATTGGAGATTTCT........................ 22 3 1.33 1.00 0.33 0.00 ................................TAATCTCAATTTGTAAATGTTAG..................................................................... 23 3 1.33 0.33 0.33 0.67 ................................TAATCTCAATTTGTGAATGTGAG..................................................................... 23 3 1.33 0.33 0.33 0.67 ................................TAATCTCAATTCGTAAATGTGAG..................................................................... 23 3 1.33 0.33 0.67 0.33 .....................................TCAATTTGTAAATGTGAG..................................................................... 18 3 1.33 0.00 1.00 0.33 ................................TAATCTCAATTTGTAAATGTGAC..................................................................... 23 3 1.33 0.33 1.00 0.00 ................................TAATCTCAATTTGTCAATGTGAG..................................................................... 23 3 1.33 0.00 1.00 0.33 ..............................................................................CACTTTGCxATTGGAGATTGCT........................ 21 3 1.33 0.00 1.33 0.00 ............................................................................CTCACTTTGCAATTGGAGATTGCT........................ 24 3 1.33 0.33 0.67 0.33 ................................TAATCTCAATTTGTAAATGAGAG..................................................................... 23 3 1.33 0.33 0.33 0.67 ................................TAATCTCAATTTGTAAATGTGAGTT................................................................... 25 3 1.33 1.00 0.00 0.33 ..............................................................................CACTTTGAAATTGGAGATTGCT........................ 22 3 1.33 0.33 0.00 1.00 ..............................................................................CACTTTGCAATTGCAGATTGCT........................ 22 3 1.33 0.33 1.00 0.00 ................................TAATCTCAATTTCTAAATGTGAG..................................................................... 23 3 1.33 0.33 0.67 0.33 ..............................................................................CACTCTGCAATTGGAGATTGCT........................ 22 3 1.00 0.33 0.67 0.00 ..............................................................................CACTTTGCAATTGGAGATTGT......................... 21 3 1.00 0.33 0.33 0.33 ..............................................................................CACTTTGCAATCGGAGATTGCT........................ 22 3 1.00 0.67 0.33 0.00 ....................................CTCAATTTGTAAATGTGAG..................................................................... 19 3 1.00 0.67 0.33 0.00 ................................TAATCTCAATTTTTAAATGTGAG..................................................................... 23 3 1.00 0.00 0.33 0.67 .............................................................................TCACTTTGCAATTGGAGATTGTT........................ 23 3 1.00 1.00 0.00 0.00 ...............................................................................ACTTTGCAATTGGAGATTG.......................... 19 3 1.00 1.00 0.00 0.00 .......................................................CGGTTTGAGCCATTTGACGCACT.............................................. 23 3 1.00 0.33 0.67 0.00 ................................TAATCACAATTTGTAAATGTGAG..................................................................... 23 3 1.00 0.00 0.33 0.67 ................................TAATCTCAATTTGCAAATGTGAG..................................................................... 23 3 1.00 0.33 0.33 0.33 ................................TAATCTCAATTTGTAACTGTGAG..................................................................... 23 3 1.00 0.67 0.33 0.00 ............................................................................CTCACTTTGCAATTGGAGATTGC......................... 23 3 1.00 0.33 0.67 0.00 ..............................................................................CACTTTTCAATTGGAGATTGCT........................ 22 3 1.00 1.00 0.00 0.00
3	super_73:137420-137519 +	40.05	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT--- ---------------------TTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATTATT Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..........................TAATCTCAATTTGTAAATGTGAG........................................................................ 23 3 2160.00 683.33 1030.00 446.67 ........................................................................CACTTTGCAATTGGAGATTGCT........................... 22 3 1833.00 872.00 839.33 121.67 ..........................TAATCTCAATTTGTAAATGTGA......................................................................... 22 3 119.67 53.67 23.33 42.67 ..........................TAATCTCAATTTGTAAATGTGAGT....................................................................... 24 3 93.00 67.67 7.00 18.33 .......................................................................TCACTTTGCAATTGGAGATTGCT........................... 23 3 86.33 50.67 23.67 12.00 ........................................................................CACTTTGCAATTGGAGATTGC............................ 21 3 57.00 20.00 32.33 4.67 .......................................................................TCACTTTGCAATTGGAGATTG............................. 21 3 45.33 27.33 8.67 9.33 .......................................................................TCACTTTGCAATTGGAGATTGC............................ 22 3 24.00 11.00 10.00 3.00 .........................................................................ACTTTGCAATTGGAGATTGCT........................... 21 3 13.67 11.67 1.33 0.67 ........................................................................CACTTTGCAATTGGAGATTG............................. 20 3 12.67 9.67 1.33 1.67 ..........................TAATCTCAATTTGTAAATGT........................................................................... 20 3 9.67 7.33 1.33 1.00 ..........................TAATCTTAATTTGTAAATGTGAG........................................................................ 23 3 7.67 0.33 7.00 0.33 ..........................TAATCTCAATTTGTAAATGTGAGA....................................................................... 24 3 7.33 2.33 3.00 2.00 ........................................................................CACTTTGCAATTGGAGATTGCTT.......................... 23 3 7.00 6.33 0.00 0.67 ..........................TAATCTCAATTTGTAAATATGAG........................................................................ 23 3 7.00 4.33 2.00 0.67 ..........................TAATCTCAATTTGTAAATGTGAGC....................................................................... 24 3 6.67 2.67 2.67 1.33 ........................................................................CACTTTGCAATTGGAGATAGCT........................... 22 3 6.33 6.00 0.00 0.33 ........................................................................CACTTTGCAATTGGAGATCGCT........................... 22 3 6.33 6.00 0.33 0.00 ..........................TAATCTCAATTTGTAAATCTGAG........................................................................ 23 3 6.00 5.00 0.67 0.33 ..........................TAATCTCAATTTGTAAATGTGT......................................................................... 22 3 6.00 5.33 0.00 0.67 ..........................TAATTTCAATTTGTAAATGTGAG........................................................................ 23 3 5.67 0.00 4.67 1.00 ..........................TAATCTCAATTTGTxAATGTGAG........................................................................ 22 3 5.33 0.67 4.00 0.67 ..........................TAATCTCAATTTGTAAATTTGAG........................................................................ 23 3 5.33 4.33 0.67 0.33 ..........................TAATCTCAATTTGTAAATGTGAA........................................................................ 23 3 5.33 1.67 1.33 2.33 .......................................................................TCACTTTGCAATTGGAGATTGT............................ 22 3 5.00 4.00 0.67 0.33 ........................................................................CACTTTGCAATTGGAGATTGTT........................... 22 3 4.67 2.33 2.00 0.33 ..........................TAATCTCxATTTGTAAATGTGAG........................................................................ 22 3 4.67 0.00 3.67 1.00 ..........................TAATCTCAATTTGTAAATGTG.......................................................................... 21 3 4.33 2.33 0.00 2.00 ........................................................................CACTTTGCAATTGGGGATTGCT........................... 22 3 4.00 1.00 2.67 0.33 ........................................................................CACTTTGCAATTGGAGGTTGCT........................... 22 3 3.67 1.67 1.67 0.33 ...........................AATCTCAATTTGTAAATGTGAG........................................................................ 22 3 3.67 2.00 1.33 0.33 ........................................................................CACTTTGCAACTGGAGATTGCT........................... 22 3 3.33 2.67 0.67 0.00 ........................................................................CACxTTGCAATTGGAGATTGCT........................... 21 3 3.33 0.67 2.67 0.00 ........................................................................CACTTTGCAATTGGCGATTGCT........................... 22 3 3.33 1.00 2.00 0.33 .......................................................................TCACTTTGCAATTGGAGATTGA............................ 22 3 3.00 2.00 0.00 1.00 ..........................TAATCTAAATTTGTAAATGTGAG........................................................................ 23 3 3.00 0.33 0.33 2.33 ........................................................................CACTTTGCAATTGGAGACTGCT........................... 22 3 3.00 1.00 2.00 0.00 ..........................TAATCTCAACTTGTAAATGTGAG........................................................................ 23 3 3.00 1.00 1.33 0.67 ..........................TAATCTCAATCTGTAAATGTGAG........................................................................ 23 3 2.67 1.00 1.33 0.33 ........................................................................CACTTTGCAATTGGAGATGGCT........................... 22 3 2.67 2.33 0.00 0.33 ..........................TAACCTCAATTTGTAAATGTGAG........................................................................ 23 3 2.67 0.33 2.00 0.33 ........................................................................CGCTTTGCAATTGGAGATTGCT........................... 22 3 2.67 1.00 1.00 0.67 ......................................................................CTCACTTTGCAATTGGAGATTG............................. 22 3 2.67 2.00 0.33 0.33 .............................TCTCAATTTGTAAATGTGAGCGG..................................................................... 23 3 2.67 0.67 1.33 0.67 ........................................................................CACTTTGCAATTGGAGATTGCC........................... 22 3 2.33 0.33 1.33 0.67 ..........................................................................CTTTGCAATTGGAGATTGCT........................... 20 3 2.33 1.00 0.67 0.67 ........................................................................TACTTTGCAATTGGAGATTGCT........................... 22 3 2.33 0.67 1.67 0.00 ...............................TCAATTTGTAAATGTGAGCGGTTT.................................................................. 24 3 2.33 0.00 2.00 0.33 ..........................TAATCTCAATTTGTAAATGTGGG........................................................................ 23 3 2.33 0.33 1.33 0.67 .........................CTAATCTCAATTTGTAAATGTGAG........................................................................ 24 3 2.33 0.00 1.67 0.67 ..........................TGATCTCAATTTGTAAATGTGAG........................................................................ 23 3 2.33 0.00 2.33 0.00 ..........................TAATCTCAATTTGTxxATGTGAG........................................................................ 21 3 2.00 1.00 1.00 0.00 ........................................................................CACTTTGTAATTGGAGATTGCT........................... 22 3 2.00 1.00 1.00 0.00 ..........................TAATCTCAATTTGTAAGTGTGAG........................................................................ 23 3 2.00 0.00 2.00 0.00 ..........................TAATCTCGATTTGTAAATGTGAG........................................................................ 23 3 2.00 1.00 1.00 0.00 ..........................TAATCTCAATTTGTAAATGTAAG........................................................................ 23 3 2.00 1.00 0.33 0.67 ............................ATCTCAATTTGTAAATGTGAG........................................................................ 21 3 2.00 0.00 1.67 0.33 ..........................TAATCTCCATTTGTAAATGTGAG........................................................................ 23 3 2.00 1.00 1.00 0.00 ..........................TAATCCCAATTTGTAAATGTGAG........................................................................ 23 3 2.00 1.00 0.67 0.33 ........................................................................CACTTCGCAATTGGAGATTGCT........................... 22 3 2.00 0.67 1.00 0.33 ..........................TAATCTCAATTTGTAGATGTGAG........................................................................ 23 3 1.67 0.33 1.00 0.33 ........................................................................CACTTTGCAATTGGAGATTGCA........................... 22 3 1.67 1.33 0.33 0.00 ..........................TAGTCTCAATTTGTAAATGTGAG........................................................................ 23 3 1.67 0.00 1.00 0.67 ..........................TAATCTCAATTTGTAAATGCGAG........................................................................ 23 3 1.67 0.33 0.67 0.67 ........................................................................CACTTTCCAATTGGAGATTGCT........................... 22 3 1.67 0.67 1.00 0.00 ........................................................................CACTTTGCACTTGGAGATTGCT........................... 22 3 1.67 1.00 0.67 0.00 ........................................................................CACTTTGCGATTGGAGATTGCT........................... 22 3 1.67 1.00 0.67 0.00 ........................................................................CACCTTGCAATTGGAGATTGCT........................... 22 3 1.67 1.00 0.67 0.00 ..........................TAATCTCAATTTGTAAATGTGCG........................................................................ 23 3 1.67 1.00 0.33 0.33 ........................................................................CACTTTGCxATTGGAGATTGCT........................... 21 3 1.33 0.00 1.33 0.00 ..........................TAATCTCAATTTGTAAATGTGAGTT...................................................................... 25 3 1.33 1.00 0.00 0.33 ..........................TAATCTCAATTCGTAAATGTGAG........................................................................ 23 3 1.33 0.33 0.67 0.33 ........................................................................CACTTTGCAATTGCAGATTGCT........................... 22 3 1.33 0.33 1.00 0.00 ...............................TCAATTTGTAAATGTGAG........................................................................ 18 3 1.33 0.00 1.00 0.33 ........................................................................CACTTTGCAATTGxxGATTGCT........................... 20 3 1.33 0.67 0.67 0.00 ..........................TAATCTCAATTTGTAAATGAGAG........................................................................ 23 3 1.33 0.33 0.33 0.67 ......................................................................CTCACTTTGCAATTGGAGATTGCT........................... 24 3 1.33 0.33 0.67 0.33 ........................................................................CACTTTGCAATTGGAGATTTCT........................... 22 3 1.33 1.00 0.33 0.00 ........................................................................CACTTTGAAATTGGAGATTGCT........................... 22 3 1.33 0.33 0.00 1.00 ..........................TAATCTCAATTTGTCAATGTGAG........................................................................ 23 3 1.33 0.00 1.00 0.33 ..........................TAATCTCAATTTGTAAATGTTAG........................................................................ 23 3 1.33 0.33 0.33 0.67 ..........................TAATCTCAATTTGTAAATGTGAC........................................................................ 23 3 1.33 0.33 1.00 0.00 ..........................TAATCTCAAATTGTAAATGTGAG........................................................................ 23 3 1.33 0.00 1.00 0.33 .......................................................................TCACTTTGCAATTGGAGATT.............................. 20 3 1.33 1.00 0.00 0.33 ........................................................................CACTTTGCAATTGGAGCTTGCT........................... 22 3 1.33 0.67 0.33 0.33 ..........................TAATCTCAATTTGTGAATGTGAG........................................................................ 23 3 1.33 0.33 0.33 0.67 ..........................TAATCTCAATTTCTAAATGTGAG........................................................................ 23 3 1.33 0.33 0.67 0.33 ...............................TCAATTTGTAAATGTGAGCGGTT................................................................... 23 3 1.00 0.33 0.67 0.00 ........................................................................CACTTTGCAATTGGATATTGCT........................... 22 3 1.00 0.33 0.33 0.33 ..........................TAATCTCAATTTGTAACTGTGAG........................................................................ 23 3 1.00 0.67 0.33 0.00 ......................................................................CTCACTTTGCAATTGGAGATTGC............................ 23 3 1.00 0.33 0.67 0.00 .......................................................................TCACTTTGCAATTGGAGATTGTT........................... 23 3 1.00 1.00 0.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGT............................ 21 3 1.00 0.33 0.33 0.33 ..................................................................CGCACTCACTTTGCAATTGGAG................................. 22 3 1.00 0.00 1.00 0.00 ..........................TAATCACAATTTGTAAATGTGAG........................................................................ 23 3 1.00 0.00 0.33 0.67 ........................................................................CACTTTGCAATCGGAGATTGCT........................... 22 3 1.00 0.67 0.33 0.00 ........................................................................CACTTTGCAATTAGAGATTGCT........................... 22 3 1.00 0.67 0.33 0.00 ..........................TAATCTCAATTTGCAAATGTGAG........................................................................ 23 3 1.00 0.33 0.33 0.33 ........................................................................CACTCTGCAATTGGAGATTGCT........................... 22 3 1.00 0.33 0.67 0.00 ..........................TAATCTCATTTTGTAAATGTGAG........................................................................ 23 3 1.00 0.00 1.00 0.00 .........................................................................ACTTTGCAATTGGAGATTG............................. 19 3 1.00 1.00 0.00 0.00

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chrX:9589334-9589451 +	97.47	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..........................TAATCTCAATTTGTAAATGTGAG..................................................................... 23 1 952.00 239.00 35.00 503.00 163.00 12.00 ........................................................................CACTTTGCAATTGGAGATTGCT........................ 22 1 787.00 240.00 20.00 491.00 34.00 2.00 ..........................TAATCTCAATTTGTAAATGTGA...................................................................... 22 1 66.00 15.00 4.00 21.00 8.00 18.00 .......................................................................TCACTTTGCAATTGGAGATTGCT........................ 23 1 56.00 2.00 2.00 48.00 2.00 2.00 ..........................TAATCTCAATTTGTAAATGTGAGT.................................................................... 24 1 38.00 1.00 1.00 26.00 10.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGC......................... 21 1 26.00 7.00 0.00 15.00 2.00 2.00 .......................................................................TCACTTTGCAATTGGAGATTG.......................... 21 1 16.00 0.00 1.00 6.00 1.00 8.00 ..........................TAATCTCAATTTGTAAATGTTAG..................................................................... 23 1 15.00 1.00 4.00 1.00 9.00 0.00 ........................................................................CACTTTGCAATTGGAGATTG.......................... 20 1 14.00 0.00 0.00 13.00 0.00 1.00 ..........................TAATCTCAATTTGTAAATGT........................................................................ 20 1 8.00 0.00 0.00 7.00 1.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAT..................................................................... 23 1 7.00 0.00 2.00 1.00 4.00 0.00 .........................................................................ACTTTGCAATTGGAGATTGCT........................ 21 1 7.00 2.00 0.00 4.00 1.00 0.00 ..........................TAATCTCAATTTGTAAATGTGCG..................................................................... 23 1 6.00 1.00 0.00 1.00 4.00 0.00 ........................................................................CACTTTGCAATTGGCGATTGCT........................ 22 1 5.00 0.00 0.00 2.00 3.00 0.00 .......................................................................TCACTTTGCAATTGGAGATTGC......................... 22 1 5.00 0.00 0.00 4.00 1.00 0.00 ........................................................................CACTTTGCAATTGGAGCTTGCT........................ 22 1 5.00 4.00 0.00 0.00 1.00 0.00 ........................................................................CACTTTGCAATTGGGGATTGCT........................ 22 1 4.00 1.00 0.00 1.00 2.00 0.00 ..........................TAATCTCAATTTGTAAGTGTGAG..................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 0.00 ..........................CAATCTCAATTTGTAAATGTGAG..................................................................... 23 1 3.00 2.00 1.00 0.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAGA.................................................................... 24 1 3.00 0.00 0.00 2.00 0.00 1.00 ........................................................................CACTTTGCAATTCGAGATTGCT........................ 22 1 3.00 0.00 1.00 2.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTGG...................................................................... 22 1 3.00 0.00 0.00 0.00 0.00 3.00 ..........................TAATCTCAATTTGTAAATGTGTG..................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 0.00 ......................................................................CTCACTTTGCAATTGGAGATTGCT........................ 24 1 3.00 0.00 0.00 3.00 0.00 0.00
4	chrX:17421888-17421974 -	36.21	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCA-TTTGACGCACTCACTTTGCA--ATTGGAGA-TTGCTCGAGACTGCGGCATATGCCACATT TC-----------------------------------TGCTCATTTGATTTGGTTTAGTTATTTTGTTTCGTCTGCTCTTAAACATCGTACATGTTCTAGAAAATATGAATTTGGTTTTATT Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4690:11631458-11631575 -	97.47	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..........................TAATCTCAATTTGTAAATGTGAG..................................................................... 23 1 5602.00 335.00 600.00 0.00 4667.00 ........................................................................CACTTTGCAATTGGAGATTGCT........................ 22 1 1305.00 145.00 120.00 0.00 1040.00 ..........................TAATCTCAATTTGTAAATGTGA...................................................................... 22 1 472.00 23.00 40.00 0.00 409.00 ..........................TAATCTCAATTTGTAAATGTGAGT.................................................................... 24 1 144.00 0.00 17.00 0.00 127.00 ..........................TAATCTCAATTTGTAAATGTTAG..................................................................... 23 1 89.00 29.00 23.00 0.00 37.00 ..........................TAATCTCAATTTGTAAATGTGAT..................................................................... 23 1 79.00 11.00 15.00 0.00 53.00 ........................................................................CACTTTGCAATTGGAGATTGC......................... 21 1 44.00 4.00 5.00 0.00 35.00 ..........................TAATCTCAATTTGTAAATGTGAC..................................................................... 23 1 44.00 1.00 1.00 0.00 42.00 ..........................TAATCTCAATTTGTAAATTTGAG..................................................................... 23 1 39.00 8.00 6.00 0.00 25.00 ..........................TAATCTCAATTTGTAAATGTGAA..................................................................... 23 1 39.00 0.00 1.00 0.00 38.00 ..........................TAATCTAAATTTGTAAATGTGAG..................................................................... 23 1 38.00 2.00 0.00 0.00 36.00 .......................................................................TCACTTTGCAATTGGAGATTG.......................... 21 1 33.00 1.00 0.00 0.00 32.00 .......................................................................TCACTTTGCAATTGGAGATTGCT........................ 23 1 28.00 7.00 2.00 0.00 19.00 ..........................TAATATCAATTTGTAAATGTGAG..................................................................... 23 1 22.00 0.00 0.00 0.00 22.00 ..........................TAATCTCAATTTTTAAATGTGAG..................................................................... 23 1 19.00 3.00 0.00 0.00 16.00 ..........................TAATCTCAATTTGTAAATGT........................................................................ 20 1 18.00 1.00 3.00 0.00 14.00 ........................................................................AACTTTGCAATTGGAGATTGCT........................ 22 1 16.00 0.00 1.00 0.00 15.00 ..........................TAATCTCAATTTGTAAATGTG....................................................................... 21 1 14.00 0.00 2.00 0.00 12.00 ........................................................................CACTTTGCAATTGGAGATTTCT........................ 22 1 14.00 6.00 1.00 0.00 7.00 ..........................TAATCTCAATTTGTAAATGCGAG..................................................................... 23 1 14.00 0.00 2.00 0.00 12.00 ........................................................................CACTTTGCAATTTGAGATTGCT........................ 22 1 13.00 1.00 0.00 0.00 12.00 ..........................TAATCTCAATTTGTAAATGTGAGA.................................................................... 24 1 12.00 1.00 1.00 0.00 10.00 ........................................................................CACTTTGCAACTGGAGATTGCT........................ 22 1 11.00 10.00 0.00 0.00 1.00 .........................ATAATCTCAATTTGTAAATGTGAG..................................................................... 24 1 11.00 0.00 2.00 0.00 9.00 ........................................................................CACTTTGCAATTGGAGATTG.......................... 20 1 11.00 2.00 0.00 0.00 9.00 ..........................TAATCTCAATTTGTAAATGTGAGC.................................................................... 24 1 10.00 0.00 1.00 0.00 9.00 ..........................TAGTCTCAATTTGTAAATGTGAG..................................................................... 23 1 10.00 1.00 1.00 0.00 8.00 ........................................................................CACTTTGCAATTGGATATTGCT........................ 22 1 10.00 1.00 0.00 0.00 9.00 ........................................................................CACTTTGCAATTGTAGATTGCT........................ 22 1 9.00 2.00 1.00 0.00 6.00 .........................................................................ACTTTGCAATTGGAGATTGCT........................ 21 1 9.00 0.00 3.00 0.00 6.00 ...........................AATCTCAATTTGTAAATGTGAG..................................................................... 22 1 9.00 1.00 1.00 0.00 7.00 ..........................TATTCTCAATTTGTAAATGTGAG..................................................................... 23 1 9.00 0.00 0.00 0.00 9.00 ...............................TCAATTTGTAAATGTGAG..................................................................... 18 1 9.00 0.00 0.00 0.00 9.00 ..........................TAACCTCAATTTGTAAATGTGAG..................................................................... 23 1 8.00 0.00 0.00 0.00 8.00 ..........................TACTCTCAATTTGTAAATGTGAG..................................................................... 23 1 8.00 0.00 0.00 0.00 8.00 ..........................TAATCTCAATTTGTAAATGTGGG..................................................................... 23 1 8.00 0.00 1.00 0.00 7.00 .........................CTAATCTCAATTTGTAAATGTGAG..................................................................... 24 1 8.00 1.00 0.00 0.00 7.00 ..........................TAATCTCAATTTGTACATGTGAG..................................................................... 23 1 8.00 2.00 0.00 0.00 6.00 ..........................TAATCTCAATTTGTAACTGTGAG..................................................................... 23 1 7.00 0.00 2.00 0.00 5.00 ..........................TAATCTCAATTCGTAAATGTGAG..................................................................... 23 1 7.00 1.00 1.00 0.00 5.00 ........................................................................CACTTTTCAATTGGAGATTGCT........................ 22 1 7.00 1.00 0.00 0.00 6.00 ........................................................................CAATTTGCAATTGGAGATTGCT........................ 22 1 7.00 2.00 0.00 0.00 5.00 ..........................TAATCCCAATTTGTAAATGTGAG..................................................................... 23 1 7.00 0.00 0.00 0.00 7.00 ..........................TAATCTCAATTTGTAAATCTGAG..................................................................... 23 1 7.00 0.00 1.00 0.00 6.00 ..........................TAATCTCAATTTGTAAACGTGAG..................................................................... 23 1 7.00 0.00 1.00 0.00 6.00 ..........................TAATTTCAATTTGTAAATGTGAG..................................................................... 23 1 6.00 2.00 0.00 0.00 4.00 ..........................TAATCTCACTTTGTAAATGTGAG..................................................................... 23 1 6.00 1.00 2.00 0.00 3.00 ..........................TAATCTCAATTTGTAAATGTGT...................................................................... 22 1 6.00 0.00 1.00 0.00 5.00 ..........................TAATCTCAATTTGTAAATGTTAT..................................................................... 23 1 6.00 4.00 1.00 0.00 1.00 ............................ATCTCAATTTGTAAATGTGAG..................................................................... 21 1 6.00 0.00 0.00 0.00 6.00 ..........................TAATCTTAATTTGTAAATGTGAG..................................................................... 23 1 6.00 0.00 0.00 0.00 6.00 ..........................TAAGCTCAATTTGTAAATGTGAG..................................................................... 23 1 5.00 0.00 2.00 0.00 3.00 ..........................TAATCTCAATTTGTAAATGTCAG..................................................................... 23 1 5.00 1.00 0.00 0.00 4.00 ........................................................................CACTTTGCAATTGGAGATTGAT........................ 22 1 5.00 0.00 0.00 0.00 5.00 ..........................TAATCTCAATTTGTAAGTGTGAG..................................................................... 23 1 5.00 0.00 1.00 0.00 4.00 .......TTGTATCTGCAGCATTGAA............................................................................................ 19 1 5.00 3.00 0.00 0.00 2.00 ..........................TAATCTCAATTTGTGAATGTGAG..................................................................... 23 1 5.00 1.00 0.00 0.00 4.00 ..........................TAATCTCAATTTGTAAATGTAAG..................................................................... 23 1 5.00 0.00 0.00 0.00 5.00 ..........................TAATCTCAATTTGCAAATGTGAG..................................................................... 23 1 5.00 0.00 1.00 0.00 4.00 ..........................TAATCTCGATTTGTAAATGTGAG..................................................................... 23 1 5.00 0.00 0.00 0.00 5.00 ........................................................................CACTTTGCAATTGGGGATTGCT........................ 22 1 5.00 0.00 0.00 0.00 5.00 .......................................................................TCACTTTGCAATTGGAGATTGC......................... 22 1 4.00 0.00 2.00 0.00 2.00 ..............................CTCAATTTGTAAATGTGAG..................................................................... 19 1 4.00 2.00 0.00 0.00 2.00 ..........................TAATCTCAACTTGTAAATGTGAG..................................................................... 23 1 4.00 0.00 0.00 0.00 4.00 ..........................TGATCTCAATTTGTAAATGTGAG..................................................................... 23 1 4.00 0.00 0.00 0.00 4.00 ..........................TAATCTCAATTTGTAAATATGAG..................................................................... 23 1 4.00 0.00 1.00 0.00 3.00 ..........................TAATCTCAATTTGTAAATGTGCG..................................................................... 23 1 4.00 0.00 2.00 0.00 2.00 ..........................TAATCTCAATTTGTxAATGTGAG..................................................................... 22 1 4.00 0.00 0.00 0.00 4.00 ..........................TAATCGCAATTTGTAAATGTGAG..................................................................... 23 1 4.00 1.00 3.00 0.00 0.00 ..........................TAATCTCCATTTGTAAATGTGAG..................................................................... 23 1 3.00 0.00 0.00 0.00 3.00 ..........................TAATCTCAATTTGTAGATGTGAG..................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 ..........................TAATCTCAATTTGTAAATGAG....................................................................... 21 1 3.00 0.00 0.00 0.00 3.00 ........................................................................CACTTTGAAATTGGAGATTGCT........................ 22 1 3.00 0.00 0.00 0.00 3.00 ........................................................................CACTTTGCAATTGGAGCTTGCT........................ 22 1 3.00 1.00 1.00 0.00 1.00 ............................ATCTCAATTTGTAAATGTGA...................................................................... 20 1 3.00 0.00 1.00 0.00 2.00 ........................................................................CACTTGGCAATTGGAGATTGCT........................ 22 1 3.00 0.00 3.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGAGAG..................................................................... 23 1 3.00 0.00 2.00 0.00 1.00 ..........................TCATCTCAATTTGTAAATGTGAG..................................................................... 23 1 3.00 0.00 0.00 0.00 3.00 ........................................................................CACTTTGCAATTGGAGATTGCTT....................... 23 1 3.00 0.00 1.00 0.00 2.00 ..........................TAATCTCAAxTTGTAAATGTGAG..................................................................... 22 1 3.00 0.00 0.00 0.00 3.00 ..........................TAATCTCAGTTTGTAAATGTGAG..................................................................... 23 1 3.00 0.00 0.00 0.00 3.00 ...............................TCAATTTGTAAATGTGAGCGGTT................................................................ 23 1 3.00 0.00 0.00 0.00 3.00 ........................................................................CACTTTGCAATTAGAGATTGCT........................ 22 1 3.00 0.00 2.00 0.00 1.00 ..........................TAATCTCAATTTTTAAATGTGA...................................................................... 22 1 3.00 1.00 1.00 0.00 1.00 ..........................TAATCACAATTTGTAAATGTGAG..................................................................... 23 1 3.00 0.00 0.00 0.00 3.00 ..........................TAATCTCAATTTGTAAATGTGAGTT................................................................... 25 1 3.00 0.00 0.00 0.00 3.00 ..........................TAATCTCAATTTGTCAATGTGAG..................................................................... 23 1 3.00 1.00 0.00 0.00 2.00 ........................................................................CACTTTGCAATTGGAGTTTGCT........................ 22 1 3.00 0.00 0.00 0.00 3.00 ..........................TAATCTAAATTTGTAAATGTGA...................................................................... 22 1 3.00 0.00 0.00 0.00 3.00 ..........................TAATxTCAATTTGTAAATGTGAG..................................................................... 22 1 3.00 0.00 0.00 0.00 3.00

droFic1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000454038:646941-647056 +	94.1	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ---CGAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTATGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm
2	scf7180000454038:646941-647053 +	39.34	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ---CGAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTATGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCAC--- Size Hit Count Total Norm
3	scf7180000454038:646974-647116 +	35.56	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT------------------------------------------------------------ -----------------------------------TTTGTAAATGTGAGCGGTATGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATTATATTATGTACACACCTTATATAGCCTCTCTCTATATATACATACTATATATTATATATC Size Hit Count Total Norm
4	scf7180000453912:1624251-1624313 -	25.86	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT TAAACTGTTGCAA------------GAAAGCCGTAGTCATAAATATGGTCGAAAGGAGCGAGTGAGAGGG------------------ATTG-------------------------A Size Hit Count Total Norm

droEug1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409533:552249-552366 +	94.97	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ATACGAAATGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm
2	scf7180000409230:541491-541605 -	42.15	GTACCAAT-TGTATCTG---C-----AGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ATACATATGTATACCTAGTGAAGCAGGATGATGAATGAATTCAATTAGTGAA------------AAATCAACAAGCAACCACAAATTGTAGCCTAAATTAAACCAAAAAAAAAAAAGAAACAAAACA Size Hit Count Total Norm

droBia1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302041:37384-37489 +	78.24	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ------------TCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGATTTGAGCC-TTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCCTATGCCACATT Size Hit Count Total Norm
2	scf7180000302041:37419-37503 +	26.7	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT-------------- G----------------------------------------------AGCGATTTGAGCC-TTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCCTATGCCACATTATTATGTACACACC Size Hit Count Total Norm

droTak1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000414432:173339-173453 +	90.78	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ----CAATTATATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCAATCTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm
2	scf7180000414432:173371-173469 +	35.1	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT---------------- -----------------------------------TTTGTAAATGTGAGCAATCTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATTATTATGTACACACCTT Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000491023:1179149-1179266 -	96.64	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ATACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTCGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm

droRho1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000777097:73960-74077 -	96.64	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT ATACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT Size Hit Count Total Norm
2	scf7180000777097:73924-74049 -	37.83	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT------------------------------------ ----------------------------ATCTCAATTTGTAAATGTGAGCGGTTTGAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATTATTATGTACACACCCTATATAGCCTATATATCTGCC Size Hit Count Total Norm

droKik1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000302696:761091-761202 +	89.19	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT TT-----TTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTCGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATTTGCCACAT- Size Hit Count Total Norm
3	scf7180000302696:761121-761237 +	43.81	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT---------------------------------- -----------------------------------TTTGTAAATGTGAGCGGTTTAAGCCATTCGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATTTGCCACATATTATGTACACACACTCCTCCAAATAGCCATGTAC Size Hit Count Total Norm

droAna3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_12929:2899093-2899202 -	79.87	GTACCAATTGTATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACA--TT -----------ATCTGCAGCATTGAATAATCTCAATTTGTAAATGTGAGCGATTTGAGCCATTTGACGGACTCACTTTGCAACTGGAGATTGCTCGAGACTGCGGCATATGCCACAAAGT Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..........................TAATCTCAATTTGTAAATGTGAG....................................................................... 23 1 2432.00 870.00 1035.00 464.00 63.00 ........................................................................CACTTTGCAACTGGAGATTGCT.......................... 22 1 2176.00 1673.00 375.00 100.00 28.00 ..........................TAATCTCAATTTGTAAATGTGA........................................................................ 22 1 273.00 72.00 157.00 40.00 4.00 ..........................TAATCTCAATTTGTAAATGTGAGT...................................................................... 24 1 241.00 128.00 73.00 39.00 1.00 ........................................................................CACTTTGCAACTGGAGATTGC........................... 21 1 128.00 94.00 21.00 10.00 3.00 ........................................................................CACTTTGCAACTGGAGATTG............................ 20 1 81.00 68.00 9.00 4.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAT....................................................................... 23 1 38.00 6.00 23.00 6.00 3.00 ..........................TAATCTCAATTTGTAAATGT.......................................................................... 20 1 36.00 28.00 4.00 3.00 1.00 ........................................................................CACTTTGCAACTGGAGATTGAT.......................... 22 1 33.00 29.00 2.00 1.00 1.00 ..........................TAATCTCAATTTGTAAATGTTAG....................................................................... 23 1 33.00 10.00 8.00 9.00 6.00 ..........................TAATCTCAATTTGTAAATGTGT........................................................................ 22 1 28.00 20.00 2.00 6.00 0.00 .........................................................................ACTTTGCAACTGGAGATTGCT.......................... 21 1 25.00 16.00 7.00 2.00 0.00 ........................................................................CACTTTGCAACTGGAGATTGCTT......................... 23 1 24.00 23.00 1.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTG......................................................................... 21 1 19.00 6.00 11.00 2.00 0.00 ........................................................................CACTTTGCAACTGGAGATT............................. 19 1 16.00 16.00 0.00 0.00 0.00 ........................................................................CACTTTGCAACTAGAGATTGCT.......................... 22 1 14.00 14.00 0.00 0.00 0.00 ........................................................................CACTTTGCAATTGGAGATTGCT.......................... 22 1 13.00 6.00 5.00 0.00 2.00 ........................................................................CACTTTGCAACTGGAGATTTCT.......................... 22 1 13.00 8.00 4.00 0.00 1.00 ........................................................................CACTTTGCAACTCGAGATTGCT.......................... 22 1 12.00 10.00 1.00 1.00 0.00 ........................................................................CACTTTGCAACTGGATATTGCT.......................... 22 1 11.00 10.00 0.00 0.00 1.00 ........................................................................CACTTTGCAACAGGAGATTGCT.......................... 22 1 11.00 11.00 0.00 0.00 0.00 ........................................................................AACTTTGCAACTGGAGATTGCT.......................... 22 1 10.00 7.00 2.00 1.00 0.00 ..........................TAATCTAAATTTGTAAATGTGAG....................................................................... 23 1 9.00 2.00 7.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTGCG....................................................................... 23 1 9.00 1.00 0.00 7.00 1.00 ........................................................................CACTTTGCAACTGGAGATTGGT.......................... 22 1 9.00 9.00 0.00 0.00 0.00 ........................................................................CACTTTGCAACCGGAGATTGCT.......................... 22 1 9.00 7.00 2.00 0.00 0.00 ........................................................................CACCTTGCAACTGGAGATTGCT.......................... 22 1 8.00 8.00 0.00 0.00 0.00 ........................................................................CACTTTGCAACTTGAGATTGCT.......................... 22 1 8.00 6.00 2.00 0.00 0.00 ........................................................................CACTTTGCAAATGGAGATTGCT.......................... 22 1 8.00 6.00 0.00 2.00 0.00 ..........................TAATCTCAATTTGTAAATCTGAG....................................................................... 23 1 8.00 2.00 1.00 5.00 0.00 ..........................TAATCTCAATTTGTAAATGTAAG....................................................................... 23 1 8.00 5.00 3.00 0.00 0.00 ..........................TAATCTCAATTCGTAAATGTGAG....................................................................... 23 1 7.00 4.00 2.00 0.00 1.00 ..........................TAATCTCAATTTGTAAATGTGAGA...................................................................... 24 1 7.00 2.00 4.00 1.00 0.00 ........................................................................CACTTTGAAACTGGAGATTGCT.......................... 22 1 7.00 2.00 4.00 1.00 0.00 ..........................TAATCGCAATTTGTAAATGTGAG....................................................................... 23 1 7.00 0.00 0.00 7.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAGC...................................................................... 24 1 6.00 1.00 5.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAGTT..................................................................... 25 1 6.00 2.00 2.00 2.00 0.00 ........................................................................CACTTTGCAACTGGACATTGCT.......................... 22 1 6.00 6.00 0.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTCAG....................................................................... 23 1 6.00 4.00 1.00 1.00 0.00 ..........................TAATCTCxATTTGTAAATGTGAG....................................................................... 22 1 5.00 2.00 3.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATGTGGG....................................................................... 23 1 5.00 1.00 3.00 1.00 0.00 ........................................................................CACTTTGCAACTGGAGATTGTT.......................... 22 1 5.00 4.00 0.00 1.00 0.00 ........................................................................CACTTTGCAACTGTAGATTGCT.......................... 22 1 5.00 4.00 0.00 0.00 1.00 ..........................TAATCTCAATCTGTAAATGTGAG....................................................................... 23 1 5.00 1.00 2.00 2.00 0.00 ..........................TAATCTCGATTTGTAAATGTGAG....................................................................... 23 1 5.00 0.00 3.00 2.00 0.00 ...........................AATCTCAATTTGTAAATGTGAG....................................................................... 22 1 5.00 1.00 1.00 2.00 1.00 ..........................TAGTCTCAATTTGTAAATGTGAG....................................................................... 23 1 5.00 1.00 3.00 1.00 0.00 ..........................TAATATCAATTTGTAAATGTGAG....................................................................... 23 1 5.00 0.00 4.00 1.00 0.00 ..........................TAATTTCAATTTGTAAATGTGAG....................................................................... 23 1 5.00 1.00 2.00 1.00 1.00 ........................................................................CACTTTGCAACGGGAGATTGCT.......................... 22 1 5.00 5.00 0.00 0.00 0.00 ..........................TAATCTCAGTTTGTAAATGTGAG....................................................................... 23 1 5.00 0.00 1.00 4.00 0.00 ..........................TAATCTCAATTTGTATATGTGAG....................................................................... 23 1 5.00 2.00 1.00 1.00 1.00 ..........................TAATCTCAATTTGTAAATGTGTG....................................................................... 23 1 5.00 0.00 0.00 5.00 0.00 ........................................................................CACTTTTCAACTGGAGATTGCT.......................... 22 1 5.00 5.00 0.00 0.00 0.00 ..........................TAATCTCAATTAGTAAATGTGAG....................................................................... 23 1 4.00 4.00 0.00 0.00 0.00 ..........................TAATCTCAATTTGTAAATATGAG....................................................................... 23 1 4.00 1.00 2.00 1.00 0.00 ........................................................................CGCTTTGCAACTGGAGATTGCT.......................... 22 1 4.00 4.00 0.00 0.00 0.00 ..........................TAATCTCAATTTGCAAATGTGAG....................................................................... 23 1 4.00 1.00 1.00 2.00 0.00 ..........................TAATCTCAATTTGTACATGTGAG....................................................................... 23 1 4.00 1.00 0.00 3.00 0.00 ..........................TAATCTCAATTTGTAAATGTGAA....................................................................... 23 1 4.00 1.00 2.00 1.00 0.00 ..........................TAATCTCAATTTGTAAATTTGAT....................................................................... 23 1 4.00 0.00 0.00 1.00 3.00 ........................................................................CACTTTGTAACTGGAGATTGCT.......................... 22 1 4.00 2.00 1.00 0.00 1.00 ..........................TAATCTCATTTTGTAAATGTGAG....................................................................... 23 1 4.00 2.00 0.00 2.00 0.00 ..........................TAATCTCAATTTCTAAATGTGA........................................................................ 22 1 4.00 3.00 0.00 1.00 0.00 ..........................TAATCTCAATTGGTAAATGTGAG....................................................................... 23 1 4.00 2.00 0.00 2.00 0.00 ........................................................................CACTTTGCAACTGCAGATTGCT.......................... 22 1 3.00 2.00 0.00 1.00 0.00 ..........................TAATCTCAATTTGTAAGTGTGAG....................................................................... 23 1 3.00 1.00 1.00 0.00 1.00 ..........................TAATCTCAATTTATAAATGTGAG....................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ........................................................................CACTTTCCAACTGGAGATTGCT.......................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................TAATCTCAATTTTTAAATGTGAG....................................................................... 23 1 3.00 1.00 0.00 1.00 1.00 ..........................TAATCTTAATTTGTAAATGTGAG....................................................................... 23 1 3.00 0.00 1.00 2.00 0.00 ........................................................................CATTTTGCAACTGGAGATTGCT.......................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................TAATATCAATTTGTAAATGTGA........................................................................ 22 1 3.00 0.00 2.00 1.00 0.00 ..........................TAATCCCAATTTGTAAATGTGAG....................................................................... 23 1 3.00 0.00 2.00 1.00 0.00 ........................................................................CACTTTGCAAGTGGAGATTGCT.......................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................TAATCTCAATTTGTAAACGTGAG....................................................................... 23 1 3.00 0.00 0.00 2.00 1.00 ........................................................................CACTTTGCAACTGTAGATTTCT.......................... 22 1 3.00 1.00 2.00 0.00 0.00 ..........................TAATCTCAATTTCTAAATGTGAG....................................................................... 23 1 3.00 1.00 1.00 0.00 1.00 .........................................................................ACTTTGCAACTGGAGATTG............................ 19 1 3.00 1.00 2.00 0.00 0.00 ..........................GAATCTCAATTTGTAAATGTGAG....................................................................... 23 1 3.00 0.00 1.00 2.00 0.00 ..........................TAATCTCAATTTGTGAATGTGAG....................................................................... 23 1 3.00 1.00 0.00 2.00 0.00 ........................................................................CACTTTGCAACTGGAGACTGCT.......................... 22 1 3.00 1.00 1.00 0.00 1.00 ........................................................................CCCTTTGCAACTGGAGATTGCT.......................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................TAATCTCAATTTGTAGATGTGAG....................................................................... 23 1 3.00 0.00 3.00 0.00 0.00 ........................................................................CACTTTGCAGCTGGAGATTGCT.......................... 22 1 3.00 2.00 1.00 0.00 0.00 .........................ATAATCTCAATTTGTAAATGTGAG....................................................................... 24 1 3.00 2.00 1.00 0.00 0.00 .........................................................................ACTTTGCAACTGGAGATTGCTT......................... 22 1 3.00 3.00 0.00 0.00 0.00 ..........................TAATCTCAATATGTAAATGTGAG....................................................................... 23 1 3.00 3.00 0.00 0.00 0.00 ..........................TAAGCTCAATTTGTAAATGTGAG....................................................................... 23 1 3.00 0.00 0.00 3.00 0.00 ..........................CAATCTCAATTTGTAAATGTGAG....................................................................... 23 1 3.00 0.00 2.00 1.00 0.00 .........................................................................ACTTTGCAACTGGAGATTGC........................... 20 1 3.00 0.00 2.00 0.00 1.00 ........................................................................CACTTTGCAACTGGAGCTTGCT.......................... 22 1 3.00 2.00 0.00 1.00 0.00
4	scaffold_13335:356267-356370 -	39.13	GTACC-AATTGTATCTGC-AG----CATTGAATAATCTCAATTTGTAAAT-GTGAGCGGTTTAAGCCATTTGACGCACTCACTTTGCAATTGGAGATTGCTCGAGACTGCGGCATATGCCACATT GTACACAAAAGTTACGATAATCGTTTATTGA----------AATGCAAATTTTTTGCTGATTT-------TGCTGCTTTTAGAAGTCGATTTGA----GTTTGAGATTGTTTTTTGTGTTATT-T Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ........................TTATTGA----------TTTGCAAATTT......................................................................... 18 1 2.00 0.00 1.00 0.00 1.00