dme-mir-303- 12- and 20-way alignments

dme-mir-303	chrX:4260212-4260281 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 4260252-4260273
   star strand at position 4260218-4260239
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chrX:4260197-4260296 -	AAAACCAAATTGATAT--CTTGGTTTAGGTTTCAC-AGGAAACTG----------GTTTAATAACGAAAACTAGTTTCCTCTAAAATCCTAATCAAGACATCATGTGTCGTCG
droSim1	chrX:3275244-3275341 -	AAACC-AATGTGATCT--CTTGCTTTGGCATT-AA-AGGAAGCTA----------GTTTAATTACGAAAACTAGTTTCCTCTAACGTTTCAAACAATACATCATGTGTCGTCG
droSec1	super_4:2464324-2464421 +	AAACC-AATGTGATCT--CTTGCTTTGGCTTT-AA-AGGAATCTA----------GTTTGATTACGAAAACTAGTTTCCTCTAAGGTTTTAAACATTACATCATGTGTCGTCG
droYak2	chrX:4177737-4177819 +	GAACT-CAAATAATCTGCCTTGCTTAGAATTTTAA-GAGCAAAAA----------GTTTGTTTACAAAAACTATTTACCCCTAAAATTCTAATCT------------------
droEre2	scaffold_4690:1630987-1631073 -	GAACC-AAAAAATGTG-CTTTGTTTAGAATTTTAGCGAGGAATCATTACAAATATGGATGTGAACTTAAAGTACTCACTGCAAG------------------------AAACG
droAna3	Unknown	-----------------------------------------------------------------------------------------------------------------
dp4	Unknown	-----------------------------------------------------------------------------------------------------------------
droPer1	Unknown	-----------------------------------------------------------------------------------------------------------------
droWil1	scaffold_181150:2098814-2098829 +	AAATC-------------------------------------------------------------------------------------------------ATTCGTCAACT
droVir3	Unknown	-----------------------------------------------------------------------------------------------------------------
droMoj3	Unknown	-----------------------------------------------------------------------------------------------------------------
droGri2	Unknown	-----------------------------------------------------------------------------------------------------------------

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chrX:4260197-4260296 -	NA	AAAACCAAATTGAT--A-----TCTTGGTTTAGGTT----------TC----------------------------ACAGGAAAC-------------------------------------------TGGTTTAATAACGAAAACTAGTTTCCTCTAAAATCC------------------------------------------------------------TAATCAAGACA-TCA----------TGTGTCGTCG
droSim1	chrX:3275244-3275342 -	8	AAAACCAATGTGAT--C-----TCTTGCTTTGGCAT----------T-----------------------------AAAGGAAGC-------------------------------------------TAGTTTAATTACGAAAACTAGTTTCCTCTAACGTTT------------------------------------------------------------CAAACAATACA-TCA----------TGTGTCGTCG
droSec1	super_4:2464323-2464421 +	1	AAAACCAATGTGAT--C-----TCTTGCTTTGGCTT----------T-----------------------------AAAGGAATC-------------------------------------------TAGTTTGATTACGAAAACTAGTTTCCTCTAAGGTTT------------------------------------------------------------TAAACATTACA-TCA----------TGTGTCGTCG
droYak2	chrX:4177737-4177835 +	1	GAACTCAAA-TAATCTG-----CCTTGCTTAGAATT----------TTAA-G---------------------------AGCAAA-------------------------------------------AAGTTTGTTTACAAAAACTATTTACCCCTAAAATTC------------------------------------------------------------TAATCTAGTCA-GCA----------TTA--TTTCG
droEre2	scaffold_4690:1630987-1631073 -	1	GAACCAAAAAATGT--G-----CTTTGTTTAGAATT----------TTAGCG------AGGAATCATTACAAATAT------------------------------------------------------GGATGTGAACTTAAAGT--------------ACT------------------------------------------------------------CACT----GC-----------------AAGAAACG
droEug1	scf7180000409076:260374-260485 -	3	AAAGTTGTTC--AT---------------TTAACAT----------T-----------------------------TAAAGAA--------------------------------------------------------------------------------TAATTTAAAAAAAGTGATGGTTTTATAGTGTTTTTTGGCCCACTGTTGAATTGTTTTTTTTTAAGCAAAACA-TTT----------AGTAGTTGTC
droBia1	scf7180000301703:497690-497799 +	1	GAAAAATTACTCGT--G-----CCTGGCACCCAATG----------TC----------------------------CAGGGATTC-------------------------------------------TTATTTACCCATACACATAACGATCTTTGGACATTG------------------------------------------------------------TGAAGCGAATC-GCGAAAACATTGCTGCGGTGCCG
droTak1	scf7180000415394:1162865-1162940 +	1	ACAAAAAAAGTGAT--A-----TTTATTCTTGGTTT----------TTAA-T-CGATAAATAT---------------------------------------------------------------------TTATTAATTGA-C-----------------------------------------------------------------------------------C-AAACACCAC----------GATTTAATAA
droEle1	scf7180000491011:2115170-2115267 +	1	ATAACAATCTTTCG--A-----TTTTGGTAAGTAGT----------TCA------------------------------GACTGC-------------------------------------------TGTCTTCTTATCATAAATTGTTTCGTTTTAATAAAA------------------------------------------------------------TTATTTGGTTA-TTG----------TGATTGGAAT
droRho1	scf7180000779334:418422-418514 +	2	AAGATTACATTTTT-----------TAGTGAA------------------------TGTATTC-------------TCATTAGAC-------------------------------------------TGGTTCAACTACAACAATTAACAACATTTGAAGATT------------------------------------------------------------TATT----ATA-AAA----------TGTATAATAT
droFic1	scf7180000453901:212284-212435 +	1	GTAACCATTACTGA--CAACACGCTGCTTATTTCAT----------A-----------------------------AAACAGTGTTAATCTGAAAGTTAAAACTAAAGTTCAAACATATTGAGTCAACAAGTCAAAAAACAACAATGCACAA------------------------------------TCATGCTAGGTACTCCT-------------------TAGTCAAAATA-TTA----------TTATTCATTA
droKik1	scf7180000302610:1791618-1791727 +	1	AAAAGGAAAATAAT----------TAAAC-----AAGAAAAGAAAATTAT-TACAATAAAAAATTATTAAAAAAAT----------------------------------------------------AAACCCCTCAAAAACAACCC-------AC-AAAATC------------------------------------------------------------CATGAAAAACA-CAA----------CTT--TTCTT
droAna3	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp4	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer1	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil1	scaffold_181150:2098814-2098829 +	2	AAATCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTCAACT
droVir3	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2	Unknown	NA	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

AAAACCAAATTGATAT--CTTGGTTTAGGTTTCAC-AGGAAACTG----------GTTTAATAACGAAAACTAGTTTCCTCTAAAATCCTAATCAAGACATCATGTGTCGTCG

Size

Hit Count

Total Norm

droSim1

AAACC-AATGTGATCT--CTTGCTTTGGCATT-AA-AGGAAGCTA----------GTTTAATTACGAAAACTAGTTTCCTCTAACGTTTCAAACAATACATCATGTGTCGTCG	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
........................TTGGCATT-AA-AGGAAGCTA----------GTT.......................................................	22	1	6.00	1.00	0.00	5.00	0.00
........................TTGGCATT-AA-AGGAAGCTA----------GT........................................................	21	1	4.00	1.00	1.00	2.00	0.00
........................TTGGCATT-AA-AGGAAGCTA----------G.........................................................	20	1	3.00	0.00	0.00	3.00	0.00
........................TTGGCATT-AA-AGGAATCTA----------G.........................................................	20	1	3.00	0.00	0.00	3.00	0.00
......................................................................CTAGTTTCCTCTAACGTTTCAAA....................	23	1	2.00	0.00	0.00	0.00	2.00
......................................................................CTAGTTTCCTCTAACGTTTCA......................	21	1	2.00	0.00	0.00	2.00	0.00
........................TTGGCATT-AA-AGGAAGCTA----------GTTC......................................................	23	1	1.00	1.00	0.00	0.00	0.00
...CC-AATGTGATCT--CTTGCT.........................................................................................	18	1	1.00	0.00	0.00	1.00	0.00
......................................................................CTAGTTTCCTCTAACGTTTCAA.....................	22	1	1.00	0.00	0.00	1.00	0.00
AAACC-AATGTGATCT--CTTGCT.........................................................................................	21	1	1.00	0.00	0.00	1.00	0.00
.AACC-AATGTGATCT--CTTGCT.........................................................................................	20	1	1.00	0.00	0.00	1.00	0.00
........................TTGGCATT-AA-AGGAAGCTA----------GTTA......................................................	23	1	1.00	1.00	0.00	0.00	0.00

droSec1

AAACC-AATGTGATCT--CTTGCTTTGGCTTT-AA-AGGAATCTA----------GTTTGATTACGAAAACTAGTTTCCTCTAAGGTTTTAAACATTACATCATGTGTCGTCG	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
........................TTGGCTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	961.00	807.00	70.00	84.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTT......................................................	23	1	298.00	278.00	2.00	18.00
........................TTGGCTTT-AA-AGGAATCTA----------GT........................................................	21	1	142.00	126.00	4.00	12.00
........................TTGGCTTT-AA-AGGAATCTA----------G.........................................................	20	1	75.00	70.00	0.00	5.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTA......................................................	23	1	25.00	20.00	4.00	1.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTTT.....................................................	24	1	18.00	16.00	0.00	2.00
........................TTGGCTTT-AA-AGGAATCTC----------GTT.......................................................	22	1	7.00	7.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTA.......................................................	22	1	6.00	6.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTTA.....................................................	24	1	6.00	6.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTC----------GTTT......................................................	23	1	5.00	5.00	0.00	0.00
........................TTGGCCTT-AA-AGGAATCTA----------GTT.......................................................	22	1	4.00	3.00	0.00	1.00
........................TTGGCTTT-AA-AGGAATCTT----------GTTT......................................................	23	1	4.00	4.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTCT.....................................................	24	1	4.00	4.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTG----------GTT.......................................................	22	1	4.00	4.00	0.00	0.00
.............................TTT-AA-AGGTATCTA----------GTTT......................................................	18	1	4.00	0.00	4.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTTTT....................................................	25	1	4.00	4.00	0.00	0.00
........................TTGGCTTT-AA-AGGAACCTA----------GTT.......................................................	22	1	3.00	2.00	1.00	0.00
.........................TGGCTTT-AA-AGGAATCTA----------GTT.......................................................	21	1	3.00	3.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTG----------GTTT......................................................	23	1	3.00	3.00	0.00	0.00
........................TTGGATTT-AA-AGGAATCTA----------GTT.......................................................	22	1	3.00	2.00	1.00	0.00
........................TTGGCTTT-AA-AGGAATCTT----------GTT.......................................................	22	1	3.00	3.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTG----------GTTTT.....................................................	24	1	2.00	2.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------A.........................................................	20	1	2.00	2.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------TTT.......................................................	22	1	2.00	2.00	0.00	0.00
........................TTGGCTTT-AA-AGGGATCTA----------GTT.......................................................	22	1	2.00	1.00	1.00	0.00
........................TTGGCTTT-AA-AGGACTCTA----------GTT.......................................................	22	1	2.00	2.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTAA......................................................	23	1	2.00	2.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTC.......................................................	22	1	2.00	2.00	0.00	0.00
........................CTGGCTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	2.00	2.00	0.00	0.00
........................TTTGCTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	2.00	1.00	1.00	0.00
........................TTGGCTCT-AA-AGGAATCTA----------GTT.......................................................	22	1	2.00	2.00	0.00	0.00
........................TTCGCTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	2.00	1.00	0.00	1.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTAT.....................................................	24	1	2.00	2.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTC----------GT........................................................	21	1	2.00	2.00	0.00	0.00
........................TTGGCxTT-AA-AGGAATCTA----------GTT.......................................................	21	1	2.00	2.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTAT......................................................	23	1	2.00	1.00	0.00	1.00
.........................TTGCTTT-AA-AGGAATCTA----------GTT.......................................................	21	1	2.00	2.00	0.00	0.00
........................TTGGGTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTTTAA...................................................	26	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCAA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGCxTT-AA-AGGAATCTA----------GTTT......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------T.........................................................	20	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------ATT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGCTTA-AA-AGGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTTG.....................................................	24	1	1.00	1.00	0.00	0.00
........................TTGCCTTT-AA-AGGAATCTA----------GT........................................................	21	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AG-AGGAATCTA----------GTT.......................................................	22	1	1.00	0.00	0.00	1.00
............................TTTT-AA-AGGTATCTA----------GTTT......................................................	19	1	1.00	0.00	1.00	0.00
..............................TT-AA-AGGTATCTA----------GTTTT.....................................................	18	1	1.00	0.00	1.00	0.00
........................TTGGCTTT-AA-AGGAATCTT----------GTTTA.....................................................	24	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTC----------G.........................................................	20	1	1.00	1.00	0.00	0.00
........................TTGGCTTx-xA-AGGAATCTA----------GTTT......................................................	21	1	1.00	1.00	0.00	0.00
........................TTGCCTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTCGCTTT-AA-AGGAATCTA----------GTTTA.....................................................	24	1	1.00	1.00	0.00	0.00
.........................TGGCTTT-AA-AGGAATCTA----------GTTA......................................................	22	1	1.00	0.00	0.00	1.00
........................TTGGCTTT-AA-AGGAAACTA----------GTT.......................................................	22	1	1.00	0.00	1.00	0.00
........................TTGGCTTT-AA-CGGAATCTA----------GTTT......................................................	23	1	1.00	1.00	0.00	0.00
........................TTGGCCTT-AA-AGGAATCTA----------GTTT......................................................	23	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-GGGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTATT.....................................................	24	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTCA.....................................................	24	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTC......................................................	23	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATTTA----------GTT.......................................................	22	1	1.00	0.00	1.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTTC.....................................................	24	1	1.00	1.00	0.00	0.00
........................TTCGCTTT-AA-AGGAATCTC----------GTTT......................................................	23	1	1.00	1.00	0.00	0.00
.......................................................................TAGTTTCCTCTAAGGTTTTAAA....................	22	1	1.00	1.00	0.00	0.00
........................TTGACTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................GTGGCTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGTTTT-AA-AGGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
.......................CTTGGCTTT-AA-AGGAATCTA----------GTT.......................................................	23	1	1.00	1.00	0.00	0.00
........................TTAGCTTT-AA-AGGAATCTA----------GTTT......................................................	23	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTAA.....................................................	24	1	1.00	0.00	1.00	0.00
........................TTGGCTTT-AA-AGGGATCTA----------GTTTT.....................................................	24	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AAGAATCTA----------GTT.......................................................	22	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------CTT.......................................................	22	1	1.00	1.00	0.00	0.00
..........................GGCTTT-AA-AGGAATCTA----------GTT.......................................................	20	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-CGGAATCTA----------GT........................................................	21	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATTTA----------GT........................................................	21	1	1.00	1.00	0.00	0.00
........................TGGGCTTT-AA-AGGAATCTA----------GT........................................................	21	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AA-AGGAATCTA----------GTTAAA....................................................	25	1	1.00	1.00	0.00	0.00
........................TTGGCTTT-AC-AGGAATCTA----------GT........................................................	21	1	1.00	1.00	0.00	0.00

droYak2

GAACT-CAAATAATCTGCCTTGCTTAGAATTTTAA-GAGCAAAAA----------GTTTGTTTACAAAAACTATTTACCCCTAAAATTCTAATCT------------------	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
.......................TTAGAATTTTAA-GAGCAAAAA----------G.........................................................	22	1	5.00	0.00	0.00	5.00	0.00	0.00
.......................TTAGAATTTTAA-GAGCAAAAA----------GT........................................................	23	1	4.00	1.00	0.00	2.00	0.00	1.00
.......................................................................TATTTACCCCTAAAATTCTAATC...................	23	1	3.00	1.00	0.00	0.00	0.00	2.00
.......................TTAGAATTTTAG-GAGCAAAAA----------G.........................................................	22	1	1.00	0.00	0.00	1.00	0.00	0.00
.......................TTAGAATTTTAA-GAGCAAAAA----------GTT.......................................................	24	1	1.00	0.00	0.00	1.00	0.00	0.00
.......................TTAGAATTTTAA-GAGCAAAA.....................................................................	20	1	1.00	0.00	0.00	0.00	0.00	1.00
.......................................................................TATTCACCCCTAAAATTCTAAT....................	22	1	1.00	0.00	0.00	0.00	0.00	1.00
.......................TTAGAATTTTAA-GAGCAAAAA----------..........................................................	21	1	1.00	0.00	0.00	1.00	0.00	0.00
.......................TTAGAATTTTAA-GAGCAAAAA----------GA........................................................	23	1	1.00	0.00	0.00	1.00	0.00	0.00
.......................................................................TATTTACCCCTAAAATTCTAATCA------------------	24	1	1.00	1.00	0.00	0.00	0.00	0.00
.........................AGAATTTTAA-GAGCAAAAA----------GTT.......................................................	22	1	1.00	0.00	0.00	1.00	0.00	0.00
..................CTTGCxTAAAATTTTAA-GA...........................................................................	18	1	1.00	0.00	1.00	0.00	0.00	0.00
..................CTTGCTAAGATTTTTAA-G............................................................................	18	1	1.00	0.00	0.00	0.00	1.00	0.00

droEre2

GAACC-AAAAAATGTG-CTTTGTTTAGAATTTTAGCGAGGAATCATTACAAATATGGATGTGAACTTAAAGTACTCACTGCAAG------------------------AAACG	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
.......................................................GGATGTGAAGTTTAAGTACT......................................	20	1	1.00	0.00	0.00	1.00	0.00

droAna3

-----------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V105
Male body

V106
Head

V055
Unknown

V039
Embryo

dp4

-----------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V112
Male body

V043
Embryo

V051
Head

M022
Male body

droPer1

-----------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V111
Male body

V042
Embryo

V050
Head

V057
Head

M021
Embryo

droWil1

AAATC-------------------------------------------------------------------------------------------------ATTCGTCAACT

Size

Hit Count

Total Norm

V117
Male body

V118
Embryo

V119
Head

M020
Head

droVir3

-----------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V116
Male body

V053
Unknown

V047
Embryo

M027
Male body

M028
Head

droMoj3

-----------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V110
Male body

V056
Unknown

V049
Head

V041
Embryo

droGri2

-----------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

V109
Male body

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image						None	None	None	None	None	None	None
UNAFold Image						None	None	None	None	None	None	None

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image													None	None	None	None	None	None	None	None
UNAFold Image													None	None	None	None	None	None	None	None