Possible Orthologs for dme-mir-285

droSim1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:11307954-11308082 -	95.4	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC GCTTGCCCAGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAAAACCCACTCAATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...........................ACTGAGATCGATTGGTGCATAGA............................................................................... 23 1 50406.00 2.00 50072.00 169.00 163.00 ...........................ACTGAGATCGATTGGTGCAT.................................................................................. 20 1 10235.00 0.00 10198.00 18.00 19.00 ..........................AACTGAGATCGATTGGTGCAT.................................................................................. 21 1 7046.00 0.00 7008.00 22.00 16.00 ...........................ACTGAGATCGATTGGTGCATAG................................................................................ 22 1 5581.00 0.00 5543.00 18.00 20.00 ...........................ACTGAGATCGATTGGTGCATAGG............................................................................... 23 1 5087.00 0.00 5044.00 14.00 29.00 ..........................AACTGAGATCGATTGGTGCATAGA............................................................................... 24 1 2079.00 0.00 2068.00 6.00 5.00 ..............................................................................TAGCACCATTCGAAATCAGTGC............................. 22 1 1941.00 4.00 1928.00 2.00 7.00 ...........................ACTGAGATCGATTGGTGCATA................................................................................. 21 1 1875.00 0.00 1861.00 4.00 10.00 ..............................................................................TAGCACCATTCGAAATCAGTG.............................. 21 1 1155.00 3.00 1147.00 1.00 4.00 ..........................AACTGAGATCGATTGGTGCATAG................................................................................ 23 1 969.00 0.00 960.00 2.00 7.00 ...........................ACTGAGATCGATTGGTGCA................................................................................... 19 1 871.00 0.00 866.00 3.00 2.00 ...........................ACTGAGATCGATTGGTGCATAGT............................................................................... 23 1 817.00 0.00 813.00 3.00 1.00 ...........................ACTGAGATCGATTGGTGCATAGAA.............................................................................. 24 1 746.00 0.00 745.00 0.00 1.00 ...........................ACTGAGATCGATTGGTGCAC.................................................................................. 20 1 554.00 0.00 551.00 3.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGC............................................................................... 23 1 498.00 0.00 497.00 1.00 0.00 ............................CTGAGATCGATTGGTGCATAGA............................................................................... 22 1 460.00 0.00 458.00 1.00 1.00 ..........................AACTGAGATCGATTGGTGCAC.................................................................................. 21 1 370.00 0.00 370.00 0.00 0.00 ...........................ACTGAGATCGATTGGGGCATAGA............................................................................... 23 1 363.00 0.00 359.00 3.00 1.00 ...........................ACTGAGATCGATTGGTGCATAGAAA............................................................................. 25 1 355.00 0.00 352.00 0.00 3.00 ...........................ACTGAGATCGATTGGTGCATT................................................................................. 21 1 352.00 0.00 352.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCATA................................................................................. 22 1 342.00 0.00 336.00 2.00 4.00 ..........................AACTGAGATCGATTGGTGCATT................................................................................. 22 1 322.00 0.00 321.00 0.00 1.00 ............................CTGAGATCGATTGGTGCATAG................................................................................ 21 1 292.00 0.00 286.00 5.00 1.00 ..............................................................................TAGCACCATTCGAAATCAGTGCT............................ 23 1 210.00 2.00 207.00 0.00 1.00 ..........................AACTGAGATCGATTGGTGCATAGG............................................................................... 24 1 203.00 0.00 202.00 1.00 0.00 ..........................AACTGAGATCGATTGGTGCA................................................................................... 20 1 165.00 0.00 165.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGAT.............................................................................. 24 1 153.00 0.00 153.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGAAAA............................................................................ 26 1 146.00 0.00 143.00 3.00 0.00 ...........................ACTGAGATCGATTGGTGCATAA................................................................................ 22 1 142.00 0.00 142.00 0.00 0.00 ...........................ACTGAGATCGATTGGGGCAT.................................................................................. 20 1 140.00 0.00 139.00 0.00 1.00 ...........................ACTGAGATCGATTGGTTCATAGA............................................................................... 23 1 123.00 0.00 123.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCATGG................................................................................ 22 1 116.00 0.00 115.00 0.00 1.00 ...........................ACTGAGATCGATTxGTGCATAGA............................................................................... 22 1 111.00 0.00 111.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCATTT................................................................................ 23 1 109.00 0.00 109.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCAG.................................................................................. 20 1 95.00 0.00 95.00 0.00 0.00 ...........................ACTGAGATCGATTGGTCCATAGA............................................................................... 23 1 89.00 0.00 89.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCATAGT............................................................................... 24 1 86.00 0.00 86.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCATAT................................................................................ 22 1 84.00 0.00 84.00 0.00 0.00 ...........................ACTGAGATCGATTTGTGCATAGA............................................................................... 23 1 83.00 0.00 83.00 0.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGT............................... 20 1 76.00 1.00 75.00 0.00 0.00 ..............................................................................TAGCACCATTCGAAATCAG................................ 19 1 74.00 0.00 74.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGC.................................................................................... 18 1 71.00 0.00 71.00 0.00 0.00 ...........................ACTGAGATCGATTGGAGCATAGA............................................................................... 23 1 71.00 0.00 71.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCAG.................................................................................. 21 1 69.00 0.00 69.00 0.00 0.00 ..........................AACTGAGATCGATTGGGGCAT.................................................................................. 21 1 68.00 0.00 68.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCATAAA............................................................................... 23 1 66.00 0.00 66.00 0.00 0.00 ...........................ACTGAGATCGATTGGCGCATAGA............................................................................... 23 1 66.00 0.00 66.00 0.00 0.00 ...........................GCTGAGATCGATTGGTGCATAGA............................................................................... 23 1 65.00 0.00 65.00 0.00 0.00 ...........................ACTGAGATCGATTGGGGCATAGG............................................................................... 23 1 61.00 0.00 61.00 0.00 0.00 ...........................ACTGAGGTCGATTGGTGCATAGA............................................................................... 23 1 61.00 0.00 59.00 1.00 1.00 ...........................ACTGAGATCGATTGTTGCATAGA............................................................................... 23 1 58.00 0.00 58.00 0.00 0.00 ............................CTGAGATCGATTGGTGCATAGG............................................................................... 22 1 55.00 0.00 55.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCATAT................................................................................ 23 1 55.00 0.00 55.00 0.00 0.00 ...........................ACTGAGATCGATTGGGGCATAG................................................................................ 22 1 53.00 0.00 52.00 1.00 0.00 .................................................................................CACCATTCGAAATCAGTGCT............................ 20 1 50.00 0.00 49.00 1.00 0.00 ...........................ACTGAGATCGATTGGTGCATTT................................................................................ 22 1 49.00 0.00 49.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGC.................................................................................... 19 1 47.00 0.00 44.00 3.00 0.00 ...........................ACTGGGATCGATTGGTGCATAGA............................................................................... 23 1 43.00 0.00 43.00 0.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGA............................. 22 1 41.00 0.00 41.00 0.00 0.00 ...........................ACTGAGATCGATTCGTGCATAGA............................................................................... 23 1 41.00 0.00 41.00 0.00 0.00 ............................CTGAGATCGATTGGTGCATAGT............................................................................... 22 1 41.00 0.00 41.00 0.00 0.00 ...........................ACTGAGATCGATTGGTxCATAGA............................................................................... 22 1 39.00 0.00 39.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCAA.................................................................................. 20 1 39.00 0.00 38.00 0.00 1.00 ..........................AACTGAGATCGATTGGTGCATAGAA.............................................................................. 25 1 37.00 0.00 37.00 0.00 0.00 ............................CTGAGATCGATTGGTGCAT.................................................................................. 19 1 37.00 0.00 37.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCATAA................................................................................ 23 1 36.00 0.00 35.00 1.00 0.00 ...........................ACTGAGATCGATTGGTGCG................................................................................... 19 1 35.00 0.00 34.00 0.00 1.00 ...........................ACTGAGATCGATTGTTGCATAG................................................................................ 22 1 34.00 0.00 33.00 0.00 1.00 ..........................AACTGAGATCGATTGGTGCAA.................................................................................. 21 1 32.00 0.00 32.00 0.00 0.00 ...........................ACTGAGATCGATTGGTACATAGA............................................................................... 23 1 31.00 0.00 31.00 0.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGT............................. 22 1 29.00 0.00 29.00 0.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGG............................. 22 1 29.00 0.00 29.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGT.................................................................................... 18 1 28.00 0.00 28.00 0.00 0.00 ............................CTGAGATCGATTGGTGCA................................................................................... 18 1 28.00 0.00 28.00 0.00 0.00 ...........................ACTGAGATCGATTxGTGCATAG................................................................................ 21 1 28.00 0.00 26.00 0.00 2.00 ..............................................................................TAGCACCATTCGAAATCAGTGCC............................ 23 1 27.00 0.00 27.00 0.00 0.00 ...........................ACTGAGATCGATTGGGGCATA................................................................................. 21 1 27.00 0.00 27.00 0.00 0.00 ...........................ACTGAGATCGATTTGTGCAT.................................................................................. 20 1 26.00 0.00 26.00 0.00 0.00 ...........................ACTGAGATCGATTGGAGCAT.................................................................................. 20 1 25.00 0.00 24.00 0.00 1.00 ..........................AACTGAGATCGATTGGTGCATAGC............................................................................... 24 1 25.00 0.00 25.00 0.00 0.00 ...........................ACTGAGATCGATTGGTTCATAG................................................................................ 22 1 23.00 0.00 23.00 0.00 0.00 ...........................ACTGAGATCGATTTGTGCATAG................................................................................ 22 1 23.00 0.00 23.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCACAGA............................................................................... 23 1 22.00 0.00 22.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCATAC................................................................................ 22 1 22.00 0.00 22.00 0.00 0.00 .................................................................................CACCATTCGAAATCAGTG.............................. 18 1 21.00 0.00 21.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCATAGAT.............................................................................. 25 1 20.00 0.00 19.00 0.00 1.00 ...........................ATTGAGATCGATTGGTGCATAGA............................................................................... 23 1 20.00 0.00 20.00 0.00 0.00 ...........................ACTGAGGTCGATTGGTGCAT.................................................................................. 20 1 19.00 0.00 19.00 0.00 0.00 ..................................................TATCAGGAAAACCCACTCAATTCAACTC................................................... 28 1 19.00 0.00 18.00 0.00 1.00 ...........................ACTGAGATCGATTxGTGCAT.................................................................................. 19 1 19.00 0.00 19.00 0.00 0.00 ..........................AACTGAGATCGATTGGTGCATGG................................................................................ 23 1 19.00 0.00 19.00 0.00 0.00 ...........................ACTGAGATTGATTGGTGCATAGA............................................................................... 23 1 18.00 0.00 18.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGTATAGA............................................................................... 23 1 18.00 0.00 18.00 0.00 0.00 ...........................ACTGAGATCGATTGGTGCGTAGA............................................................................... 23 1 18.00 0.00 17.00 0.00 1.00 ...........................ACTGAGATCGATTGGTGCATAGATA............................................................................. 25 1 18.00 0.00 18.00 0.00 0.00 ...........................ACTGAGATCGGTTGGTGCATAGA............................................................................... 23 1 18.00 0.00 18.00 0.00 0.00 ...........................ACCGAGATCGATTGGTGCATAGA............................................................................... 23 1 17.00 0.00 17.00 0.00 0.00 .............................TGAGATCGATTGGTGCAT.................................................................................. 18 1 17.00 0.00 17.00 0.00 0.00 ...........................ACTGAGATCGATTGGCGCAT.................................................................................. 20 1 17.00 0.00 17.00 0.00 0.00 .............................TGAGATCGATTGGTGCATAGA............................................................................... 21 1 17.00 0.00 17.00 0.00 0.00 ............................CTGAGATCGATTGGTGCATAGAT.............................................................................. 23 1 17.00 0.00 17.00 0.00 0.00

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:4127812-4127940 -	94.63	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC ACTTGCCCATCCACTTCAAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAAAACCCACTCAATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..............................................................................TAGCACCATTCGAAATCAGTG.............................. 21 1 36332.00 26.00 48.00 36258.00 ..............................................................................TAGCACCATTCGAAATCAGTGCT............................ 23 1 30903.00 66.00 37.00 30800.00 ..............................................................................TAGCACCATTCGAAATCAGTGC............................. 22 1 14187.00 33.00 29.00 14125.00 ..............................................................................TAGCACCATTCGAAATCAGT............................... 20 1 7044.00 45.00 8.00 6991.00 ..............................................................................TAGCACCATTCGAAATCAGTGT............................. 22 1 3496.00 25.00 2.00 3469.00 ..............................................................................TAGCACCATTCGAAATCAG................................ 19 1 2365.00 2.00 3.00 2360.00 ..............................................................................TAGCACCATTCGAAATCAGTGA............................. 22 1 2153.00 0.00 1.00 2152.00 ...........................ACTGAGATCGATTGGTGCATAGA............................................................................... 23 1 1571.00 52.00 8.00 1511.00 ..............................................................................TAGCACCATTCGAAATCAGTGTT............................ 23 1 904.00 4.00 2.00 898.00 ..............................................................................TAGCACCATTCGAAATCAGTGCA............................ 23 1 436.00 0.00 0.00 436.00 ...........................ACTGAGATCGATTGGTGCAT.................................................................................. 20 1 357.00 5.00 0.00 352.00 ...........................ACTGAGATCGATTGGTGCATAG................................................................................ 22 1 253.00 5.00 0.00 248.00 ..........................AACTGAGATCGATTGGTGCAT.................................................................................. 21 1 191.00 5.00 0.00 186.00 ..............................................................................TAGCACCATTCGAAATCA................................. 18 1 148.00 0.00 0.00 148.00 ..............................................................................TAGCACCATTCGAAATCAGTT.............................. 21 1 135.00 2.00 0.00 133.00 .................................................................................CACCATTCGAAATCAGTG.............................. 18 1 131.00 0.00 0.00 131.00 ..............................................................................TAGCACCATTCGAAATCAGA............................... 20 1 115.00 0.00 0.00 115.00 ..............................................................................TAGCACCATTCGAAATCAGTA.............................. 21 1 115.00 0.00 0.00 115.00 ..............................................................................TAGCACCATTCGAAATCAGTGAA............................ 23 1 109.00 0.00 0.00 109.00 ..............................................................................TAGCACCATTCGAAATCAGTGTA............................ 23 1 109.00 0.00 0.00 109.00 ..............................................................................TAGCACCATTCGAAATCAGTGCTT........................... 24 1 85.00 0.00 0.00 85.00 ..........................AACTGAGATCGATTGGTGCATAGA............................................................................... 24 1 85.00 1.00 0.00 84.00 ..............................................................................TATCACCATTCGAAATCAGTG.............................. 21 1 83.00 1.00 0.00 82.00 ..............................................................................TAGCACCATTCGAAATCAGTGCC............................ 23 1 79.00 0.00 0.00 79.00 ..............................................................................TAGCACCATTCGAAATCAGCG.............................. 21 1 77.00 0.00 0.00 77.00 ..............................................................................TAGCACAATTCGAAATCAGTG.............................. 21 1 73.00 0.00 0.00 73.00 ..............................................................................TAGCACAATTCGAAATCAGTGCT............................ 23 1 71.00 0.00 0.00 71.00 ...........................ACTGAGATCGATTGGTGCATA................................................................................. 21 1 70.00 0.00 1.00 69.00 ..............................................................................TAGCACCATTCGAAATCAGCGCT............................ 23 1 70.00 0.00 0.00 70.00 .............................................................................CTAGCACCATTCGAAATCAGTG.............................. 22 1 68.00 0.00 0.00 68.00 ..............................................................................TAGCAACATTCGAAATCAGTG.............................. 21 1 61.00 0.00 0.00 61.00 ..............................................................................TAGCACCATTCGAAATCAATG.............................. 21 1 61.00 0.00 0.00 61.00 ..............................................................................TATCACCATTCGAAATCAGTGC............................. 22 1 59.00 1.00 0.00 58.00 ..............................................................................TATCACCATTCGAAATCAGTGCT............................ 23 1 55.00 0.00 0.00 55.00 ..............................................................................TAGCAACATTCGAAATCAGTGCT............................ 23 1 51.00 0.00 0.00 51.00 ..............................................................................TAGAACCATTCGAAATCAGTGCT............................ 23 1 50.00 0.00 0.00 50.00 ..............................................................................TAGCACCATTCGAAATCAGTGG............................. 22 1 49.00 0.00 0.00 49.00 ..............................................................................TAGCACCATTCGAAATCAGAGCT............................ 23 1 47.00 0.00 0.00 47.00 ..........................AACTGAGATCGATTGGTGCATAG................................................................................ 23 1 45.00 0.00 0.00 45.00 ..............................................................................TACCACCATTCGAAATCAGTG.............................. 21 1 45.00 0.00 0.00 45.00 .............................................................................CTAGCACCATTCGAAATCAGTGCT............................ 24 1 44.00 0.00 0.00 44.00 ..............................................................................TAGAACCATTCGAAATCAGTG.............................. 21 1 43.00 0.00 0.00 43.00 ..............................................................................TAGCACCATTCGAAATCAGAG.............................. 21 1 42.00 0.00 0.00 42.00 ..............................................................................TAGCACCATTCGAAATCATTG.............................. 21 1 41.00 0.00 0.00 41.00 ..............................................................................TAGCACCATACGAAATCAGTG.............................. 21 1 41.00 0.00 0.00 41.00 ..............................................................................TAGCACCATTCGAAATCAGCGC............................. 22 1 40.00 0.00 0.00 40.00 ...........................ACTGAGATCGATTGGTGCA................................................................................... 19 1 40.00 0.00 0.00 40.00 ..............................................................................TAGCACCATTCGAAGTCAGTG.............................. 21 1 39.00 0.00 0.00 39.00 ..............................................................................TACCACCATTCGAAATCAGTGC............................. 22 1 37.00 0.00 0.00 37.00 ..............................................................................TAGCACCATTCGAAATCAGTGAT............................ 23 1 36.00 0.00 0.00 36.00 ..............................................................................TAGCACCATTCGAAATCAATGCT............................ 23 1 36.00 2.00 0.00 34.00 ..............................................................................TAGCACCATTCGAAATCACTG.............................. 21 1 36.00 1.00 0.00 35.00 ...............................................................................AGCACCATTCGAAATCAGTG.............................. 20 1 36.00 0.00 0.00 36.00 ...........................ACTGAGATCGATTGGTGCATAGAA.............................................................................. 24 1 36.00 1.00 0.00 35.00 ..............................................................................TAGCACCATTCAAAATCAGTGCT............................ 23 1 35.00 0.00 0.00 35.00 ..............................................................................TAGCACCATTCAAAATCAGTG.............................. 21 1 35.00 0.00 0.00 35.00 ..............................................................................TAGCACCATTCGAAATCAGGGCT............................ 23 1 34.00 0.00 0.00 34.00 ..............................................................................TAGCACAATTCGAAATCAGTGC............................. 22 1 34.00 0.00 0.00 34.00 ..............................................................................TAGCACCATTCGAAGTCAGTGCT............................ 23 1 33.00 0.00 0.00 33.00 ..............................................................................TAGCACCATTCGAAATCATTGCT............................ 23 1 33.00 1.00 0.00 32.00 ..............................................................................CAGCACCATTCGAAATCAGTG.............................. 21 1 33.00 0.00 0.00 33.00 ..............................................................................TAGCACCATTCGAAATCAA................................ 19 1 33.00 0.00 0.00 33.00 ..............................................................................TAGCACCATTCGAAATCAGTC.............................. 21 1 33.00 0.00 0.00 33.00 ..............................................................................TGGCACCATTCGAAATCAGTG.............................. 21 1 32.00 0.00 0.00 32.00 ..............................................................................TAGCACCACTCGAAATCAGTG.............................. 21 1 32.00 0.00 0.00 32.00 ..............................................................................TAGCACCATACGAAATCAGTGCT............................ 23 1 31.00 0.00 0.00 31.00 ..............................................................................AAGCACCATTCGAAATCAGTG.............................. 21 1 30.00 0.00 0.00 30.00 ..............................................................................TAGCACCATTCGGAATCAGTG.............................. 21 1 30.00 0.00 0.00 30.00 ..............................................................................TAGCACCATTCGAAATCAGTTCT............................ 23 1 30.00 1.00 0.00 29.00 ..............................................................................TAGCACTATTCGAAATCAGTG.............................. 21 1 29.00 0.00 1.00 28.00 ..............................................................................TAGCACCATTCGAAATCATTGC............................. 22 1 29.00 0.00 1.00 28.00 ...............................................................................AGCACCATTCGAAATCAGTGCT............................ 22 1 29.00 0.00 0.00 29.00 ..............................................................................TACCACCATTCGAAATCAGTGCT............................ 23 1 28.00 1.00 0.00 27.00 ..............................................................................TAGCACCATCCGAAATCAGTG.............................. 21 1 28.00 0.00 0.00 28.00 ..............................................................................TAGCACCATTCGAAATCACTGCT............................ 23 1 28.00 1.00 0.00 27.00 ..............................................................................TAGCACCACTCGAAATCAGTGCT............................ 23 1 28.00 0.00 1.00 27.00 ..............................................................................TAGCACCATCCGAAATCAGTGCT............................ 23 1 28.00 1.00 0.00 27.00 ..............................................................................TAGCACCATTTGAAATCAGTG.............................. 21 1 28.00 0.00 0.00 28.00 ..............................................................................TAGCACCATTCGAGATCAGTGCT............................ 23 1 28.00 0.00 0.00 28.00 ..............................................................................TAGCGCCATTCGAAATCAGTGCT............................ 23 1 27.00 0.00 0.00 27.00 ..............................................................................TAGCGCCATTCGAAATCAGTG.............................. 21 1 27.00 0.00 0.00 27.00 ..............................................................................TAGCACCATTCGAAATTAGTGCT............................ 23 1 27.00 0.00 0.00 27.00 ..............................................................................TAGCACCATTCGAAATCAGTTT............................. 22 1 26.00 1.00 0.00 25.00 ..............................................................................TAGCACCATTCGAAATCAATGC............................. 22 1 26.00 0.00 0.00 26.00 ..............................................................................TAGCACCATTCGAACTCAGTG.............................. 21 1 26.00 0.00 0.00 26.00 ..............................................................................GAGCACCATTCGAAATCAGTG.............................. 21 1 26.00 0.00 0.00 26.00 ..............................................................................TAGCACCATTCTAAATCAGTG.............................. 21 1 24.00 0.00 0.00 24.00 ..............................................................................TAGCACCATTCGAAATCGGTGCT............................ 23 1 24.00 0.00 0.00 24.00 ..............................................................................TAGCACCGTTCGAAATCAGTG.............................. 21 1 24.00 0.00 0.00 24.00 ..............................................................................TAGCACCATTCGAAATAAGTGCT............................ 23 1 24.00 0.00 0.00 24.00 ..............................................................................TAGCACCATTCGCAATCAGTG.............................. 21 1 24.00 0.00 0.00 24.00 .............................................................................CTAGCACCATTCGAAATCAGTGC............................. 23 1 24.00 0.00 0.00 24.00 ..............................................................................TAGCACCATTCGAAATCGGTG.............................. 21 1 23.00 0.00 0.00 23.00 ..............................................................................CAGCACCATTCGAAATCAGTGCT............................ 23 1 23.00 0.00 0.00 23.00 ..............................................................................TAGCACCGTTCGAAATCAGTGCT............................ 23 1 23.00 0.00 0.00 23.00 ..............................................................................TAGCCCCATTCGAAATCAGTG.............................. 21 1 22.00 0.00 0.00 22.00 ..............................................................................TAGCACCATTCGAGATCAGTG.............................. 21 1 22.00 0.00 0.00 22.00 ..............................................................................TAGCACCACTCGAAATCAGTGC............................. 22 1 22.00 0.00 0.00 22.00 .............................TGAGATCGATTGGTGCATAGA............................................................................... 21 1 22.00 1.00 0.00 21.00 ..............................................................................TGGCACCATTCGAAATCAGTGCT............................ 23 1 22.00 0.00 0.00 22.00 ..............................................................................TAGCATCATTCGAAATCAGTG.............................. 21 1 22.00 0.00 0.00 22.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:11984774-11984902 -	94.63	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC TCTTGCCCTACCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGACAACCCACTCAATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..............................................................................TAGCACCATTCGAAATCAGTGCT............................ 23 1 53114.00 0.00 15009.00 74.00 37994.00 37.00 ..............................................................................TAGCACCATTCGAAATCAGTGC............................. 22 1 20070.00 1.00 7002.00 40.00 11870.00 1157.00 ...........................ACTGAGATCGATTGGTGCATAGA............................................................................... 23 1 15953.00 1.00 204.00 36.00 464.00 15248.00 ..............................................................................TAGCACCATTCGAAATCAGTGT............................. 22 1 6187.00 0.00 1745.00 58.00 4376.00 8.00 ..............................................................................TAGCACCATTCGAAATCAGTG.............................. 21 1 3358.00 0.00 1027.00 9.00 2137.00 185.00 ...........................ACTGAGATCGATTGGTGCAT.................................................................................. 20 1 3134.00 0.00 45.00 15.00 85.00 2989.00 ...........................ACTGAGATCGATTGGTGCATAG................................................................................ 22 1 2962.00 0.00 67.00 15.00 136.00 2744.00 ..............................................................................TAGCACCATTCGAAATCAGT............................... 20 1 2824.00 1.00 783.00 42.00 1986.00 12.00 ...........................ACTGAGATCGATTGGTGCATAGG............................................................................... 23 1 1757.00 0.00 0.00 0.00 1.00 1756.00 ..............................................................................TAGCACCATTCGAAATCAGTGTT............................ 23 1 1407.00 0.00 354.00 15.00 1038.00 0.00 ..............................................................................TAGCACCATTCGAACTCAGTGCT............................ 23 1 819.00 0.00 63.00 0.00 756.00 0.00 ..............................................................................TAGCACCATTCGCAATCAGTGCT............................ 23 1 755.00 0.00 118.00 0.00 637.00 0.00 ...........................ACTGAGATCGATTGGTGCATA................................................................................. 21 1 659.00 0.00 9.00 2.00 26.00 622.00 ...........................ACTGAGATCGATTGGTGCATAGT............................................................................... 23 1 503.00 0.00 5.00 1.00 12.00 485.00 ..............................................................................TAGCACCATTCGAAATCAGTGCA............................ 23 1 500.00 0.00 161.00 0.00 339.00 0.00 ..............................................................................TAGCACCATTCGTAATCAGTGCT............................ 23 1 493.00 0.00 111.00 0.00 382.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGA............................. 22 1 445.00 0.00 121.00 2.00 319.00 3.00 ..............................................................................TAGCACCATTCGAAATCAGCGCT............................ 23 1 414.00 0.00 67.00 0.00 347.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGAA.............................................................................. 24 1 294.00 0.00 1.00 2.00 7.00 284.00 ..........................AACTGAGATCGATTGGTGCAT.................................................................................. 21 1 290.00 0.00 1.00 1.00 4.00 284.00 ...........................ACTGAGATCGATTGGTGCA................................................................................... 19 1 264.00 0.00 4.00 0.00 6.00 254.00 ..............................................................................TAGCACCATTCGAAATCAG................................ 19 1 261.00 0.00 75.00 0.00 179.00 7.00 ..............................................................................TAGCACCATTCGAACTCAGTGC............................. 22 1 250.00 0.00 30.00 0.00 220.00 0.00 ..............................................................................TAGCACCATTCGCAATCAGTGC............................. 22 1 214.00 0.00 53.00 0.00 161.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGCGC............................. 22 1 211.00 0.00 40.00 1.00 168.00 2.00 ...........................ACTGAGATCGATTGGTGCAC.................................................................................. 20 1 182.00 0.00 0.00 0.00 1.00 181.00 ..............................................................................TAGCACCATTCGAAATCAGTGCC............................ 23 1 175.00 0.00 52.00 0.00 114.00 9.00 ..............................................................................TAGCACCGTTCGAAATCAGTGCT............................ 23 1 172.00 0.00 36.00 0.00 136.00 0.00 ...........................ACTGAGATCGATTGGGGCATAGA............................................................................... 23 1 170.00 0.00 0.00 0.00 2.00 168.00 ..............................................................................TAGCACCATGCGAAATCAGTGCT............................ 23 1 162.00 0.00 23.00 0.00 139.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTTCT............................ 23 1 152.00 0.00 39.00 0.00 113.00 0.00 ..............................................................................TAGCACCATTCGTAATCAGTGC............................. 22 1 141.00 0.00 37.00 0.00 103.00 1.00 ..............................................................................TAGCACCATTCGAAATCCGTGCT............................ 23 1 136.00 0.00 22.00 0.00 114.00 0.00 ..............................................................................TAGCACCATTCGGAATCAGTGCT............................ 23 1 129.00 0.00 34.00 0.00 95.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGGGCT............................ 23 1 124.00 0.00 17.00 0.00 107.00 0.00 ..........................AACTGAGATCGATTGGTGCATAGA............................................................................... 24 1 124.00 1.00 4.00 0.00 5.00 114.00 ...........................ACTGAGATCGATTGGTGCATT................................................................................. 21 1 120.00 0.00 0.00 0.00 1.00 119.00 ..............................................................................TAGCACCCTTCGAAATCAGTGCT............................ 23 1 112.00 0.00 26.00 1.00 85.00 0.00 ..............................................................................TAGCACCATTCGAAGTCAGTGCT............................ 23 1 111.00 0.00 16.00 0.00 95.00 0.00 ..............................................................................TAGCACCATTCGACATCAGTGCT............................ 23 1 110.00 0.00 17.00 0.00 93.00 0.00 ..............................................................................TAGCACCATTAGAAATCAGTGCT............................ 23 1 106.00 0.00 23.00 0.00 83.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTTC............................. 22 1 106.00 0.00 51.00 0.00 55.00 0.00 ..............................................................................TAGCACCATTCGAAATCATTGCT............................ 23 1 106.00 0.00 8.00 0.00 98.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGCTT........................... 24 1 105.00 0.00 22.00 1.00 82.00 0.00 ..............................................................................TAGCACCATTCGAACTCAGTGT............................. 22 1 101.00 0.00 9.00 0.00 92.00 0.00 ..............................................................................TAGCGCCATTCGAAATCAGTGCT............................ 23 1 97.00 0.00 20.00 0.00 77.00 0.00 ..............................................................................TAGCACAATTCGAAATCAGTGCT............................ 23 1 95.00 0.00 19.00 0.00 76.00 0.00 ..............................................................................TAGCACCATTCGCAATCAGTGT............................. 22 1 94.00 0.00 17.00 0.00 77.00 0.00 ..............................................................................TAGCACCAGTCGAAATCAGTGCT............................ 23 1 91.00 0.00 7.00 0.00 84.00 0.00 ..............................................................................TGGCACCATTCGAAATCAGTGCT............................ 23 1 90.00 0.00 26.00 0.00 64.00 0.00 ..............................................................................TAGCACCATTCGTAATCAGTGT............................. 22 1 89.00 0.00 19.00 0.00 70.00 0.00 ..............................................................................CAGCACCATTCGAAATCAGTGCT............................ 23 1 86.00 0.00 19.00 0.00 67.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGAGCT............................ 23 1 84.00 0.00 26.00 0.00 58.00 0.00 ............................CTGAGATCGATTGGTGCATAGA............................................................................... 22 1 84.00 0.00 2.00 0.00 5.00 77.00 ..............................................................................TAGCACCATGCGTAATCAGTGCT............................ 23 1 79.00 0.00 15.00 0.00 64.00 0.00 ..............................................................................TAGCACCATTCGAAATCACTGCT............................ 23 1 78.00 0.00 7.00 0.00 71.00 0.00 ..............................................................................TAGCACCATCCGAAATCAGTGCT............................ 23 1 78.00 0.00 19.00 0.00 59.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGGGC............................. 22 1 78.00 0.00 15.00 0.00 62.00 1.00 ...........................ACTGAGATCGATTGGTGCATAGAT.............................................................................. 24 1 77.00 0.00 0.00 0.00 2.00 75.00 ..............................................................................TAGCACCACTCGAAATCAGTGCT............................ 23 1 74.00 0.00 19.00 0.00 55.00 0.00 ..............................................................................TAACACCATTCGAAATCAGTGCT............................ 23 1 73.00 0.00 18.00 0.00 55.00 0.00 .............................................................................CTAGCACCATTCGAAATCAGTGCT............................ 24 1 69.00 0.00 23.00 0.00 46.00 0.00 ..............................................................................TAGCACCATTCGAAATCGGTGCT............................ 23 1 69.00 0.00 15.00 0.00 54.00 0.00 ..............................................................................TAGCACCATTCCAAATCAGTGCT............................ 23 1 69.00 0.00 21.00 0.00 48.00 0.00 ..............................................................................TAGCACCGTTCGAAATCAGTGC............................. 22 1 68.00 0.00 14.00 0.00 54.00 0.00 ..............................................................................TAGCACCATTCGCACTCAGTGCT............................ 23 1 68.00 0.00 8.00 0.00 60.00 0.00 ..............................................................................TAGCAACATTCGAAATCAGTGCT............................ 23 1 68.00 0.00 14.00 0.00 54.00 0.00 ..............................................................................AAGCACCATTCGAAATCAGTGCT............................ 23 1 68.00 0.00 16.00 0.00 52.00 0.00 ..............................................................................TAGCACCATTCGAAATAAGTGCT............................ 23 1 68.00 0.00 12.00 0.00 56.00 0.00 ...........................ACTGAGATCGATTGGTGCATGG................................................................................ 22 1 67.00 0.00 0.00 0.00 0.00 67.00 ..............................................................................TAGCACCATTCGTAATCAGTTCT............................ 23 1 67.00 0.00 24.00 0.00 43.00 0.00 ..............................................................................TAGCACCATTCGAAAGCAGTGCT............................ 23 1 65.00 0.00 11.00 0.00 54.00 0.00 ..............................................................................TAGCACCATTCGAAACCAGTGCT............................ 23 1 64.00 0.00 14.00 0.00 50.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGCG............................ 23 1 63.00 0.00 21.00 0.00 41.00 1.00 ..............................................................................TAGCACCGTTCGTAATCAGTGCT............................ 23 1 62.00 0.00 17.00 0.00 45.00 0.00 ...........................ACTGAGATCGATTGGGGCAT.................................................................................. 20 1 59.00 0.00 0.00 1.00 0.00 58.00 ..............................................................................TAGCACCATTCGAAATCAGTCCT............................ 23 1 58.00 0.00 4.00 1.00 53.00 0.00 ..............................................................................TATCACCATTCGAAATCAGTGCT............................ 23 1 57.00 0.00 13.00 1.00 40.00 3.00 ..............................................................................TAGCACCATTCAAAATCAGTGCT............................ 23 1 56.00 0.00 25.00 0.00 31.00 0.00 ..........................AACTGAGATCGATTGGTGCATAG................................................................................ 23 1 56.00 0.00 1.00 0.00 7.00 48.00 ..............................................................................TAGCACTATTCGAAATCAGTGCT............................ 23 1 55.00 0.00 14.00 0.00 41.00 0.00 ..............................................................................TAGCACCATTCGAACTCAGTG.............................. 21 1 55.00 0.00 8.00 0.00 47.00 0.00 ..............................................................................TAGCACCATTCTAAATCAGTGCT............................ 23 1 54.00 0.00 9.00 0.00 45.00 0.00 ..............................................................................TAGCAGCATTCGAAATCAGTGCT............................ 23 1 54.00 0.00 6.00 0.00 48.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGAT............................ 23 1 53.00 0.00 16.00 0.00 37.00 0.00 ..............................................................................TAGCACCATTCGAAATCACTGC............................. 22 1 52.00 0.00 6.00 0.00 46.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGC............................................................................... 23 1 49.00 0.00 0.00 0.00 10.00 39.00 ...............................................................................AGCACCATTCGAAATCAGTGCT............................ 22 1 49.00 0.00 12.00 0.00 37.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGTA............................ 23 1 49.00 0.00 13.00 0.00 36.00 0.00 ..............................................................................TAGCACCATTCGAAATCATTGC............................. 22 1 48.00 0.00 8.00 0.00 40.00 0.00 ..............................................................................TCGCACCATTCGAAATCAGTGCT............................ 23 1 48.00 0.00 7.00 0.00 41.00 0.00 ...........................ACTGAGATCGATTGGGGCATAG................................................................................ 22 1 47.00 0.00 0.00 0.00 0.00 47.00 ..............................................................................TAGCACCATTCGAACTCAGT............................... 20 1 46.00 0.00 3.00 0.00 43.00 0.00 ..............................................................................TAGCACCATTCGAGATCAGTGCT............................ 23 1 45.00 0.00 16.00 0.00 29.00 0.00 ...........................ACTGAGATCGATTGGTGCAG.................................................................................. 20 1 44.00 0.00 0.00 0.00 1.00 43.00 ..............................................................................TAGCACCATTCGAATTCAGTGCT............................ 23 1 44.00 0.00 0.00 0.00 44.00 0.00 ...............................................................................AGCACCATTCGAAATCAGTGC............................. 21 1 44.00 0.00 9.00 0.00 28.00 7.00 .............................................................................CTAGCACCATTCGAAATCAGTGC............................. 23 1 43.00 0.00 6.00 0.00 35.00 2.00 ..............................................................................TAGCACCATTCGAAATCAGAGC............................. 22 1 42.00 0.00 10.00 0.00 29.00 3.00 ..............................................................................TAGCACCATTCGCAATCAGTG.............................. 21 1 42.00 0.00 12.00 0.00 30.00 0.00 ...........................ACTGAGATCGATTGGTGCATTT................................................................................ 22 1 41.00 0.00 0.00 0.00 3.00 38.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4784:11929878-11930011 -	83.46	AC-----TTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC TCAGGAGCTGCACTCCCACTTCGAGTCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGAAGCCCCACTCAATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGGAGTGTC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...................................................................................TAGCACCATTCGAAATCAGTG.............................. 21 1 128004.00 0.00 3904.00 0.00 124100.00 ...................................................................................TAGCACCATTCGAAATCAGTGC............................. 22 1 95240.00 2.00 12646.00 0.00 82592.00 ...................................................................................TAGCACCATTCGAAATCAGTGCT............................ 23 1 60896.00 7.00 10931.00 0.00 49958.00 ...................................................................................TAGCACCATTCGAAATCAGTGT............................. 22 1 10823.00 0.00 2702.00 0.00 8121.00 ...................................................................................TAGCACCATTCGAAATCAGT............................... 20 1 9077.00 1.00 1083.00 0.00 7993.00 ................................ACTGAGATCGATTGGTGCATAGA............................................................................... 23 1 4593.00 0.00 339.00 0.00 4254.00 ...................................................................................TAGCACCATTCGAAATCAGTGTT............................ 23 1 2943.00 0.00 475.00 0.00 2468.00 ...................................................................................TAGCACCATTCGAAATCAGTGA............................. 22 1 2310.00 0.00 358.00 0.00 1952.00 ...................................................................................TAGCACCATTCGAAATCAGTGCA............................ 23 1 2269.00 0.00 323.00 0.00 1946.00 ...................................................................................TAGCACCATTCGAAATCAGTGCC............................ 23 1 1793.00 0.00 255.00 0.00 1538.00 ...................................................................................TAGCACCATTCGAAATCAG................................ 19 1 1608.00 0.00 186.00 0.00 1422.00 ...................................................................................TAGCACAATTCGAAATCAGTG.............................. 21 1 1213.00 0.00 3.00 0.00 1210.00 ...................................................................................TATCACCATTCGAAATCAGTG.............................. 21 1 991.00 0.00 1.00 0.00 990.00 ................................ACTGAGATCGATTGGTGCATAG................................................................................ 22 1 854.00 0.00 54.00 0.00 800.00 ...................................................................................TAGCACCATTCTAAATCAGTG.............................. 21 1 747.00 0.00 4.00 0.00 743.00 ...................................................................................TAGCACAATTCGAAATCAGTGC............................. 22 1 720.00 0.00 20.00 0.00 700.00 ...................................................................................TATCACCATTCGAAATCAGTGC............................. 22 1 680.00 0.00 9.00 0.00 671.00 ...................................................................................TAGCACCATTAGAAATCAGTG.............................. 21 1 639.00 0.00 3.00 0.00 636.00 ...................................................................................TAGCACCATTCGAAATAAGTG.............................. 21 1 608.00 0.00 3.00 0.00 605.00 ......................................................................................CACCATTCGAAATCAGTG.............................. 18 1 550.00 0.00 5.00 0.00 545.00 ...................................................................................TAGCACCATTCTAAATCAGTGC............................. 22 1 517.00 0.00 15.00 0.00 502.00 ...................................................................................TAGAACCATTCGAAATCAGTG.............................. 21 1 497.00 0.00 1.00 0.00 496.00 ...................................................................................TAGCACCATTCGAAATCAGTTC............................. 22 1 497.00 0.00 59.00 0.00 438.00 ...................................................................................TAGCACCATTCGAAATCAGTT.............................. 21 1 495.00 0.00 16.00 0.00 479.00 ...................................................................................TAGCACAATTCGAAATCAGTGCT............................ 23 1 483.00 0.00 17.00 0.00 466.00 ...................................................................................TAGCACCATTCGAAATCATTG.............................. 21 1 462.00 0.00 20.00 0.00 442.00 ...................................................................................TAGCACCATTAGAAATCAGTGC............................. 22 1 417.00 0.00 11.00 0.00 406.00 ...................................................................................TAGCACCATTCGAAATAAGTGC............................. 22 1 409.00 0.00 16.00 0.00 393.00 ...................................................................................TATCACCATTCGAAATCAGTGCT............................ 23 1 390.00 0.00 5.00 0.00 385.00 ...................................................................................TAGAACCATTCGAAATCAGTGC............................. 22 1 364.00 0.00 8.00 0.00 356.00 ...................................................................................TAGCAACATTCGAAATCAGTG.............................. 21 1 359.00 0.00 2.00 0.00 357.00 ................................ACTGAGATCGATTGGTGCAT.................................................................................. 20 1 344.00 0.00 8.00 0.00 336.00 ...................................................................................TAGCACCATTCTAAATCAGTGCT............................ 23 1 306.00 0.00 13.00 0.00 293.00 ...................................................................................TAGCACCATTCGAAATCATTGC............................. 22 1 306.00 0.00 26.00 0.00 280.00 ...................................................................................TAGCACCATTCGAAATCAGTGCG............................ 23 1 291.00 0.00 4.00 0.00 287.00 ...................................................................................TAGCACCATTCGAAATAAGTGCT............................ 23 1 278.00 0.00 19.00 0.00 259.00 ...................................................................................TAGCACCATTAGAAATCAGTGCT............................ 23 1 268.00 0.00 10.00 0.00 258.00 ...................................................................................TAGCAACATTCGAAATCAGTGC............................. 22 1 247.00 0.00 9.00 0.00 238.00 ..................................................................................CTAGCACCATTCGAAATCAGTG.............................. 22 1 240.00 0.00 6.00 0.00 234.00 ...................................................................................TACCACCATTCGAAATCAGTG.............................. 21 1 238.00 0.00 1.00 0.00 237.00 ...................................................................................TAGCACCATTCGAAATCAGCGC............................. 22 1 234.00 0.00 72.00 0.00 162.00 ..................................................................................CTAGCACCATTCGAAATCAGTGC............................. 23 1 234.00 0.00 37.00 0.00 197.00 ................................ACTGAGATCGATTGGTGCATA................................................................................. 21 1 228.00 0.00 5.00 0.00 223.00 ...................................................................................TAGAACCATTCGAAATCAGTGCT............................ 23 1 226.00 0.00 9.00 0.00 217.00 ...................................................................................TAGCACCATTCGAAATCAGTGAT............................ 23 1 225.00 0.00 14.00 0.00 211.00 ...................................................................................TAGCACCATTCGAAATCAGTTCT............................ 23 1 219.00 0.00 26.00 0.00 193.00 ...................................................................................TAGCACCATTCAAAATCAGTG.............................. 21 1 215.00 0.00 1.00 0.00 214.00 ...................................................................................TAGCACCATTCGAAATCAGTGTA............................ 23 1 206.00 0.00 30.00 0.00 176.00 ...................................................................................TAACACCATTCGAAATCAGTG.............................. 21 1 199.00 0.00 1.00 0.00 198.00 ...................................................................................TAGCACCATTCGAAATCAGTA.............................. 21 1 195.00 0.00 14.00 0.00 181.00 ...................................................................................TACCACCATTCGAAATCAGTGC............................. 22 1 188.00 0.00 6.00 0.00 182.00 ...................................................................................TAGCAACATTCGAAATCAGTGCT............................ 23 1 187.00 0.00 3.00 0.00 184.00 ...................................................................................TAGCACCATTCGAAATCAGCG.............................. 21 1 182.00 0.00 13.00 0.00 169.00 ...................................................................................TAGCACCATTCGAAATCAGGGC............................. 22 1 181.00 0.00 31.00 0.00 150.00 ...................................................................................TAGCACCATTCGAAATCATTGCT............................ 23 1 170.00 0.00 23.00 0.00 147.00 ...................................................................................TAGCACCATTCGAAATCAGCGCT............................ 23 1 155.00 0.00 42.00 0.00 113.00 ...................................................................................TAGCACCATTCGAAGTCAGTG.............................. 21 1 148.00 0.00 6.00 0.00 142.00 ....................................................................................AGCACCATTCGAAATCAGTG.............................. 20 1 143.00 0.00 5.00 0.00 138.00 ...................................................................................TAACACCATTCGAAATCAGTGC............................. 22 1 142.00 0.00 10.00 0.00 132.00 ...................................................................................TAGCACCATTTGAAATCAGTG.............................. 21 1 142.00 0.00 1.00 0.00 141.00 ...................................................................................TAGCACCATTCGAACTCAGTGC............................. 22 1 142.00 0.00 101.00 0.00 41.00 ...................................................................................TAGCACCATTCGAAACCAGTG.............................. 21 1 141.00 0.00 5.00 0.00 136.00 ...................................................................................TAGCACCATTCGAAATCAGTTT............................. 22 1 140.00 0.00 21.00 0.00 119.00 ...................................................................................TAGCACCATTCGAGATCAGTG.............................. 21 1 138.00 0.00 6.00 0.00 132.00 ...................................................................................TAGCACCATTCAAAATCAGTGC............................. 22 1 137.00 0.00 12.00 0.00 125.00 ...................................................................................TAGCACCATTCGCAATCAGTGC............................. 22 1 132.00 0.00 85.00 0.00 47.00 ...................................................................................TAGCGCCATTCGAAATCAGTG.............................. 21 1 130.00 0.00 5.00 0.00 125.00 ...................................................................................TGGCACCATTCGAAATCAGTG.............................. 21 1 125.00 0.00 5.00 0.00 120.00 ...................................................................................TAGCACTATTCGAAATCAGTG.............................. 21 1 125.00 0.00 11.00 0.00 114.00 ...................................................................................TAGCACCACTCGAAATCAGTG.............................. 21 1 124.00 0.00 3.00 0.00 121.00 ...................................................................................CAGCACCATTCGAAATCAGTG.............................. 21 1 123.00 0.00 5.00 0.00 118.00 ...................................................................................TAGCACCATTTGAAATCAGTGC............................. 22 1 117.00 0.00 6.00 0.00 111.00 ....................................................................................AGCACCATTCGAAATCAGTGC............................. 21 1 114.00 0.00 13.00 0.00 101.00 ...................................................................................TAGCACCATTCGAAATCAGTC.............................. 21 1 114.00 0.00 3.00 0.00 111.00 ...................................................................................TAGCACCATTCGAAATCAGTCC............................. 22 1 113.00 0.00 9.00 0.00 104.00 ...................................................................................TAGCACCATTCGCAATCAGTGCT............................ 23 1 112.00 0.00 78.00 0.00 34.00 ...................................................................................TAGCACCATTCGAACTCAGTG.............................. 21 1 111.00 0.00 30.00 0.00 81.00 ...................................................................................TACCACCATTCGAAATCAGTGCT............................ 23 1 110.00 0.00 6.00 0.00 104.00 ...................................................................................TAGCATCATTCGAAATCAGTG.............................. 21 1 110.00 0.00 3.00 0.00 107.00 ...................................................................................TAGCACCATTCGAACTCAGTGCT............................ 23 1 108.00 0.00 90.00 0.00 18.00 ...................................................................................TAGCACCATCCGAAATCAGTG.............................. 21 1 106.00 0.00 2.00 0.00 104.00 ...................................................................................TAGCACCATTCGAAATCACTG.............................. 21 1 105.00 0.00 9.00 0.00 96.00 ...................................................................................TAGCGCCATTCGAAATCAGTGC............................. 22 1 104.00 0.00 15.00 0.00 89.00 ...................................................................................TAGCACCGTTCGAAATCAGTG.............................. 21 1 102.00 0.00 3.00 0.00 99.00 ...................................................................................TAGTACCATTCGAAATCAGTGC............................. 22 1 100.00 0.00 8.00 0.00 92.00 ...................................................................................TAGCACCATTCGCAATCAGTG.............................. 21 1 99.00 0.00 27.00 0.00 72.00 ...................................................................................TAGCACCATTCGAAATCAGTGCTT........................... 24 1 96.00 0.00 21.00 0.00 75.00 ...................................................................................TAGCACCATTCGAAATCGGTG.............................. 21 1 96.00 0.00 4.00 0.00 92.00 ...................................................................................TAGTACCATTCGAAATCAGTG.............................. 21 1 95.00 0.00 3.00 0.00 92.00 ...................................................................................TAGGACCATTCGAAATCAGTG.............................. 21 1 95.00 0.00 4.00 0.00 91.00 ...................................................................................TAGCACTATTCGAAATCAGTGC............................. 22 1 94.00 0.00 28.00 0.00 66.00 ...................................................................................CAGCACCATTCGAAATCAGTGC............................. 22 1 92.00 0.00 16.00 0.00 76.00 ...................................................................................TAACACCATTCGAAATCAGTGCT............................ 23 1 91.00 0.00 8.00 0.00 83.00 ..................................................................................CTAGCACCATTCGAAATCAGTGCT............................ 24 1 91.00 0.00 11.00 0.00 80.00 ...................................................................................TAGCACCATTCGAAGTCAGTGC............................. 22 1 90.00 0.00 11.00 0.00 79.00 ...................................................................................TAGCACCACTCGAAATCAGTGC............................. 22 1 89.00 0.00 11.00 0.00 78.00 ...................................................................................TAGCACCATTCGAAATTAGTG.............................. 21 1 88.00 0.00 1.00 0.00 87.00 ......................................................................................CACCATTCGAAATCAGTGC............................. 19 1 87.00 0.00 2.00 0.00 85.00 ...................................................................................TAGCACCATTCAAAATCAGTGCT............................ 23 1 86.00 0.00 9.00 0.00 77.00 ...................................................................................TAGCACCATTCGGAATCAGTG.............................. 21 1 85.00 0.00 8.00 0.00 77.00 ...................................................................................TAGCACCATTCGAGATCAGTGC............................. 22 1 82.00 0.00 9.00 0.00 73.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000454113:2711074-2711205 +	81.63	ACTTGCCCTGCCA-CTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT--CAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC ATCCACACAGAAGCCTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATACCAAGGAAACCCGCTCATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409466:4030533-4030653 -	78.5	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- T----------CACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGGAAACATACTCATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCCT Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302428:4183390-4183516 -	84.71	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- ACT----CTTCCCCTTCGAATCGAAGAACTGAGATCGACTGGTGCATAGATATCAGGGAAAGCCACCCATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAGCAATCAGCAGAGTGTCT Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415741:178001-178124 +	85.71	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCA-GGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- GCTCGCC-------TTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGGAAAACCCACTCATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTCT Size Hit Count Total Norm

droEle1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000491193:3850551-3850671 -	78.5	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- ----------CTTCTTCGAATCGAAGAACTGAGCTCGATTGGTGCATAGATATCAAGGGAACCCGCTCATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTCT Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000780179:29930-30060 +	85.11	ACTTGCCCTGC-CACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- ATCCACCCAGCACACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGGGAACCCGCTCATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGCCT Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302391:881259-881381 +	81.21	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCA-GGAGA-ACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC AG-------GACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGGAGACACCCGCTT-ATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCAATCAGCAGAGTGTC Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13337:6191341-6191461 -	72.51	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC ----GCCAGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATATCAAGGAGATCCGATCATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA----- Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ..............................................................................TAGCACCATTCGAAATCAGTGCT............................ 23 1 54820.00 313.00 36029.00 18477.00 1.00 ..............................................................................TAGCACCATTCGAAATCAGTG.............................. 21 1 40643.00 107.00 38918.00 1617.00 1.00 ..............................................................................TAGCACCATTCGAAATCAGTGC............................. 22 1 31870.00 142.00 24987.00 6740.00 1.00 ...........................ACTGAGATCGATTGGTGCATAGA............................................................................... 23 1 7918.00 158.00 7293.00 467.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGT............................. 22 1 7386.00 360.00 3069.00 3957.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGT............................... 20 1 4755.00 356.00 2180.00 2219.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGTT............................ 23 1 2440.00 86.00 1382.00 972.00 0.00 ...........................ACTGAGATCGATTGGTGCAT.................................................................................. 20 1 1831.00 49.00 1682.00 100.00 0.00 ...........................ACTGAGATCGATTGGTGCATAG................................................................................ 22 1 1724.00 67.00 1416.00 241.00 0.00 ..............................................................................TATCACCATTCGAAATCAGTG.............................. 21 1 1144.00 1.00 1141.00 2.00 0.00 ..............................................................................TATCACCATTCGAAATCAGTGCT............................ 23 1 1053.00 3.00 1030.00 20.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGCA............................ 23 1 854.00 5.00 592.00 257.00 0.00 ..............................................................................TATCACCATTCGAAATCAGTGC............................. 22 1 749.00 3.00 739.00 7.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGA............................. 22 1 740.00 4.00 444.00 292.00 0.00 ..............................................................................TAGCACCATTCGAAATCAG................................ 19 1 617.00 0.00 311.00 306.00 0.00 ...........................ACTGAGATCGATTGGTGCATA................................................................................. 21 1 560.00 14.00 508.00 38.00 0.00 ..........................AACTGAGATCGATTGGTGCAT.................................................................................. 21 1 523.00 14.00 477.00 32.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTT.............................. 21 1 457.00 1.00 407.00 49.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTTCT............................ 23 1 397.00 2.00 370.00 25.00 0.00 ..........................AACTGAGATCGATTGGTGCATAGA............................................................................... 24 1 301.00 13.00 270.00 18.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGCGCT............................ 23 1 296.00 0.00 62.00 234.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTTC............................. 22 1 291.00 1.00 271.00 19.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTA.............................. 21 1 269.00 2.00 248.00 19.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTACT............................ 23 1 268.00 5.00 249.00 14.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGAT............................ 23 1 235.00 1.00 208.00 26.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGT............................................................................... 23 1 224.00 7.00 200.00 17.00 0.00 ..............................................................................TAGAACCATTCGAAATCAGTG.............................. 21 1 201.00 0.00 189.00 12.00 0.00 ..............................................................................TAGAACCATTCGAAATCAGTGCT............................ 23 1 195.00 0.00 148.00 47.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGCTT........................... 24 1 195.00 1.00 134.00 60.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGAA.............................................................................. 24 1 186.00 0.00 178.00 8.00 0.00 ...........................ACTGAGATCGATTGGTGCA................................................................................... 19 1 175.00 6.00 162.00 7.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTAC............................. 22 1 174.00 1.00 164.00 9.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGCGC............................. 22 1 170.00 1.00 28.00 141.00 0.00 .................................................................................CACCATTCGAAATCAGTG.............................. 18 1 168.00 0.00 158.00 10.00 0.00 ..............................................................................TAGCACCATTCGTAATCAGTGCT............................ 23 1 167.00 1.00 9.00 157.00 0.00 ..............................................................................TAGCACAATTCGAAATCAGTGCT............................ 23 1 160.00 0.00 79.00 81.00 0.00 ..........................AACTGAGATCGATTGGTGCATAG................................................................................ 23 1 158.00 2.00 133.00 23.00 0.00 ..................................................TATCAAGGAGATCCGATCATTTC........................................................ 23 1 149.00 3.00 126.00 20.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTCCT............................ 23 1 148.00 2.00 108.00 38.00 0.00 ..............................................................................TAGCACCATTAGAAATCAGTGCT............................ 23 1 143.00 0.00 73.00 70.00 0.00 ..............................................................................TAGCACCATTCGCAATCAGTGCT............................ 23 1 132.00 0.00 15.00 117.00 0.00 ..............................................................................TAGAACCATTCGAAATCAGTGC............................. 22 1 129.00 0.00 113.00 16.00 0.00 ..............................................................................TAGCACCATGCGAAATCAGTGCT............................ 23 1 128.00 0.00 4.00 124.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGGGCT............................ 23 1 118.00 0.00 18.00 100.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTC.............................. 21 1 115.00 1.00 112.00 2.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGTA............................ 23 1 115.00 3.00 74.00 38.00 0.00 ..............................................................................TAGCACCATTCTAAATCAGTGCT............................ 23 1 111.00 1.00 86.00 24.00 0.00 ..............................................................................TAGCACCATTCTAAATCAGTG.............................. 21 1 105.00 1.00 102.00 2.00 0.00 ..............................................................................TAGCACAATTCGAAATCAGTGC............................. 22 1 101.00 0.00 67.00 34.00 0.00 ..............................................................................TAGCACCATTCGAAGTCAGTGCT............................ 23 1 101.00 1.00 54.00 46.00 0.00 ..............................................................................TAGCACCATTCGAAATAAGTGCT............................ 23 1 100.00 0.00 60.00 40.00 0.00 ..............................................................................TATCACCATTCGAAATCAGTGT............................. 22 1 98.00 2.00 93.00 3.00 0.00 ..............................................................................TAGCACAATTCGAAATCAGTG.............................. 21 1 95.00 0.00 93.00 2.00 0.00 ..............................................................................TAGCACCGTTCGAAATCAGTGCT............................ 23 1 95.00 0.00 31.00 64.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGCC............................ 23 1 95.00 1.00 47.00 47.00 0.00 ..............................................................................TAGCACCATTAGAAATCAGTG.............................. 21 1 94.00 0.00 88.00 6.00 0.00 ..............................................................................TAGCAACATTCGAAATCAGTGCT............................ 23 1 88.00 0.00 18.00 70.00 0.00 ..............................................................................TAGCACCATCCGAAATCAGTGCT............................ 23 1 86.00 0.00 39.00 47.00 0.00 ..............................................................................TAGCACCATTCGAACTCAGTGCT............................ 23 1 83.00 0.00 11.00 72.00 0.00 ..............................................................................TAGCACCATTCGAAATCATTGCT............................ 23 1 83.00 0.00 51.00 32.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTCC............................. 22 1 81.00 1.00 60.00 20.00 0.00 ..............................................................................TAGCACCATTCGAAATAAGTG.............................. 21 1 79.00 0.00 76.00 3.00 0.00 ..............................................................................TAGCACCATTCAAAATCAGTGCT............................ 23 1 77.00 2.00 52.00 23.00 0.00 ..............................................................................TAGCACCATTAGAAATCAGTGC............................. 22 1 74.00 1.00 54.00 19.00 0.00 ..............................................................................TAGCACCATTTGAAATCAGTGCT............................ 23 1 73.00 2.00 49.00 22.00 0.00 ..............................................................................TAGCACCATTCGAAATCACTGCT............................ 23 1 71.00 0.00 10.00 61.00 0.00 ..............................................................................TAGCACCATTCGAAACCAGTGCT............................ 23 1 71.00 1.00 33.00 37.00 0.00 ..............................................................................TAGCGCCATTCGAAATCAGTGCT............................ 23 1 70.00 0.00 42.00 28.00 0.00 ..............................................................................TAGCACCATTCGGAATCAGTGCT............................ 23 1 70.00 0.00 23.00 47.00 0.00 ..............................................................................TAGCACCATTCGAAGTCAGTG.............................. 21 1 69.00 0.00 64.00 5.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGGGC............................. 22 1 68.00 0.00 7.00 61.00 0.00 ..............................................................................TAGCACCATTCAAAATCAGTG.............................. 21 1 68.00 1.00 67.00 0.00 0.00 ..............................................................................TAGCACCACTCGAAATCAGTGCT............................ 23 1 68.00 1.00 37.00 30.00 0.00 ..............................................................................TAACACCATTCGAAATCAGTGCT............................ 23 1 68.00 0.00 26.00 42.00 0.00 ..............................................................................TAGCACCATTCGAGATCAGTGCT............................ 23 1 68.00 3.00 45.00 20.00 0.00 ..............................................................................AAGCACCATTCGAAATCAGTGCT............................ 23 1 66.00 0.00 6.00 60.00 0.00 ...........................ACGGAGATCGATTGGTGCATAGA............................................................................... 23 1 65.00 0.00 59.00 6.00 0.00 ..............................................................................TAGCACCATTCGAAATAAGTGC............................. 22 1 64.00 0.00 51.00 13.00 0.00 ..............................................................................CAGCACCATTCGAAATCAGTGCT............................ 23 1 64.00 1.00 34.00 29.00 0.00 ..............................................................................TAGCACTATTCGAAATCAGTGCT............................ 23 1 64.00 0.00 25.00 39.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGAGCT............................ 23 1 63.00 0.00 9.00 54.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGTGCG............................ 23 1 62.00 0.00 36.00 26.00 0.00 ..............................................................................TAGCACCATTCTAAATCAGTGC............................. 22 1 61.00 1.00 54.00 6.00 0.00 ..............................................................................TAGCACCATTCCAAATCAGTGCT............................ 23 1 61.00 0.00 16.00 45.00 0.00 ..............................................................................GAGCACCATTCGAAATCAGTGCT............................ 23 1 60.00 0.00 9.00 51.00 0.00 ..............................................................................TATCACCATTCGAAATCAGT............................... 20 1 58.00 3.00 53.00 2.00 0.00 ..............................................................................TAGCACCATTCGCAATCAGTGC............................. 22 1 58.00 2.00 10.00 46.00 0.00 ..............................................................................TAGCACCATTCGAAATCATTGC............................. 22 1 58.00 0.00 42.00 16.00 0.00 ..............................................................................TAGCACCATTTGAAATCAGTG.............................. 21 1 58.00 0.00 56.00 2.00 0.00 ..............................................................................TAGCACCATTCGAAATCATTG.............................. 21 1 56.00 0.00 55.00 1.00 0.00 ..............................................................................TACCACCATTCGAAATCAGTGC............................. 22 1 52.00 0.00 39.00 13.00 0.00 ............................CTGAGATCGATTGGTGCATAGA............................................................................... 22 1 52.00 3.00 47.00 2.00 0.00 ..............................................................................TACCACCATTCGAAATCAGTG.............................. 21 1 51.00 0.00 51.00 0.00 0.00 ..............................................................................TAGCACCATTCGTAATCAGTGC............................. 22 1 51.00 1.00 2.00 48.00 0.00 ..............................................................................TAGCACCATTCGAAGTCAGTGC............................. 22 1 50.00 0.00 23.00 27.00 0.00 ..............................................................................TAGCATCATTCGAAATCAGTGCT............................ 23 1 50.00 0.00 26.00 24.00 0.00 ..............................................................................TAGCACCAGTCGAAATCAGTGCT............................ 23 1 50.00 0.00 0.00 50.00 0.00 ..............................................................................TAGCGCCATTCGAAATCAGTG.............................. 21 1 50.00 0.00 47.00 3.00 0.00 ..............................................................................CAGCACCATTCGAAATCAGTG.............................. 21 1 50.00 0.00 47.00 3.00 0.00 ..............................................................................TAGCACCATTCGAAATCAGAGC............................. 22 1 50.00 0.00 5.00 45.00 0.00 ..............................................................................TAGTACCATTCGAAATCAGTGCT............................ 23 1 49.00 0.00 27.00 22.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000396419:132630-132750 -	73.25	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC ----GCCAGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATATCAAGGAGATCCGATCATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACCAA----- Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chrXR_group6:1929779-1929903 -	79.5	ACTTGCCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAGAACCCACTCAATTT-AACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC TCTTACAATTACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAAGAGGACTCGCTAATTTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA----- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ...............................................................................TAGCACCATTCGAAATCAGTGCT............................ 23 1 24943.00 65.00 3.00 24875.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGC............................. 22 1 12361.00 23.00 1.00 12335.00 2.00 ...............................................................................TAGCACCATTCGAAATCAGTGT............................. 22 1 2712.00 32.00 0.00 2680.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTG.............................. 21 1 1871.00 17.00 0.00 1854.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGT............................... 20 1 1089.00 25.00 0.00 1064.00 0.00 ...........................ACTGAGATCGATTGGTGCATAGA................................................................................ 23 1 486.00 42.00 2.00 424.00 18.00 ...............................................................................TAGCACCATTCGAAATCAGTGA............................. 22 1 380.00 0.00 0.00 380.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGCA............................ 23 1 246.00 1.00 0.00 245.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGTT............................ 23 1 190.00 1.00 0.00 189.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGCGCT............................ 23 1 140.00 0.00 0.00 140.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGCGC............................. 22 1 110.00 0.00 0.00 110.00 0.00 ...............................................................................TAGCACCATTCGAAATCAG................................ 19 1 95.00 1.00 0.00 94.00 0.00 ...............................................................................TAGCACCATTCGAACTCAGTGCT............................ 23 1 87.00 0.00 0.00 87.00 0.00 ...........................ACTGAGATCGATTGGTGCATAG................................................................................. 22 1 83.00 9.00 0.00 73.00 1.00 ...............................................................................TAGCACCATTCGTAATCAGTGCT............................ 23 1 80.00 0.00 0.00 80.00 0.00 ...............................................................................TAGCACCATTCGCAATCAGTGCT............................ 23 1 67.00 0.00 0.00 67.00 0.00 ...............................................................................TAACACCATTCGAAATCAGTGCT............................ 23 1 64.00 0.00 0.00 64.00 0.00 ..........................AACTGAGATCGATTGGTGCATAGA................................................................................ 24 1 61.00 4.00 0.00 55.00 2.00 ...............................................................................TAGCACCATTCGAAATCAGGGC............................. 22 1 52.00 0.00 0.00 52.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGGGCT............................ 23 1 51.00 0.00 0.00 51.00 0.00 ..........................AACTGAGATCGATTGGTGCATAG................................................................................. 23 1 50.00 4.00 0.00 44.00 2.00 ..........................AACTGAGATCGATTGGTGCAT................................................................................... 21 1 48.00 12.00 0.00 33.00 3.00 ...............................................................................TACCACCATTCGAAATCAGTGCT............................ 23 1 47.00 0.00 0.00 47.00 0.00 ...............................................................................TAGCACCATTAGAAATCAGTGCT............................ 23 1 45.00 0.00 0.00 45.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGCTT........................... 24 1 44.00 0.00 0.00 44.00 0.00 ...............................................................................TAGCACCGTTCGAAATCAGTGCT............................ 23 1 43.00 0.00 1.00 42.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGCC............................ 23 1 42.00 0.00 0.00 42.00 0.00 ...............................................................................TAGCACCATCCGAAATCAGTGCT............................ 23 1 41.00 0.00 0.00 41.00 0.00 ...............................................................................TAGCACCATTCGAAGTCAGTGCT............................ 23 1 41.00 0.00 0.00 41.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGAGC............................. 22 1 39.00 0.00 0.00 39.00 0.00 ...............................................................................TAGCACCATGCGAAATCAGTGCT............................ 23 1 39.00 0.00 0.00 39.00 0.00 ...............................................................................TAGCACAATTCGAAATCAGTGCT............................ 23 1 38.00 0.00 0.00 38.00 0.00 ...............................................................................TAGCACCATTCGAACTCAGTGC............................. 22 1 37.00 0.00 0.00 37.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGAGCT............................ 23 1 36.00 0.00 0.00 36.00 0.00 ...............................................................................TATCACCATTCGAAATCAGTGCT............................ 23 1 35.00 0.00 0.00 35.00 0.00 ................................................................................AGCACCATTCGAAATCAGTGCT............................ 22 1 34.00 1.00 0.00 33.00 0.00 ..............................................................................CTAGCACCATTCGAAATCAGTGCT............................ 24 1 34.00 0.00 0.00 34.00 0.00 ...............................................................................TAGCACCACTCGAAATCAGTGCT............................ 23 1 34.00 0.00 0.00 34.00 0.00 ...............................................................................TAGCACTATTCGAAATCAGTGCT............................ 23 1 33.00 0.00 0.00 33.00 0.00 ...............................................................................CAGCACCATTCGAAATCAGTGCT............................ 23 1 32.00 0.00 0.00 32.00 0.00 ...............................................................................TAGCAACATTCGAAATCAGTGCT............................ 23 1 32.00 0.00 0.00 32.00 0.00 ...............................................................................TAGCACCATTCGAAATAAGTGCT............................ 23 1 31.00 0.00 0.00 31.00 0.00 ...........................ACTGAGATCGATTGGTGCAT................................................................................... 20 1 31.00 5.00 0.00 22.00 4.00 ...............................................................................TAGCGCCATTCGAAATCAGTGCT............................ 23 1 30.00 0.00 0.00 30.00 0.00 ...............................................................................TAGCACCATTCGTAATCAGTGC............................. 22 1 29.00 0.00 1.00 28.00 0.00 ...............................................................................TAGCATCATTCGAAATCAGTGCT............................ 23 1 29.00 0.00 0.00 29.00 0.00 ...............................................................................TAGCACCATTCGAAATCACTGCT............................ 23 1 29.00 0.00 0.00 29.00 0.00 ...............................................................................TAGCACCATTCGGAATCAGTGCT............................ 23 1 28.00 0.00 0.00 28.00 0.00 ..............................................................................CTAGCACCATTCGAAATCAGTGC............................. 23 1 28.00 0.00 0.00 28.00 0.00 ...............................................................................TAACACCATTCGAAATCAGTGC............................. 22 1 26.00 0.00 0.00 26.00 0.00 ...............................................................................TGGCACCATTCGAAATCAGTGCT............................ 23 1 25.00 0.00 0.00 25.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGAT............................ 23 1 25.00 0.00 0.00 25.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTCCT............................ 23 1 24.00 0.00 0.00 24.00 0.00 ...............................................................................TAGCACCATTCGCAATCAGTGC............................. 22 1 24.00 0.00 0.00 24.00 0.00 ...........................ACTGAGATCGATTGGTGCATA.................................................................................. 21 1 23.00 4.00 0.00 17.00 2.00 ...............................................................................TAGCACCATTCGAAACCAGTGCT............................ 23 1 23.00 0.00 0.00 23.00 0.00 ...............................................................................TAGCACCATTCCAAATCAGTGCT............................ 23 1 23.00 0.00 0.00 23.00 0.00 ...............................................................................TAGCACCATTCGAAATCACTGC............................. 22 1 22.00 0.00 0.00 22.00 0.00 ...............................................................................TAGCACCATTAGAAATCAGTGC............................. 22 1 22.00 0.00 0.00 22.00 0.00 ...............................................................................TAGCACCATTCAAAATCAGTGCT............................ 23 1 20.00 0.00 0.00 20.00 0.00 ...............................................................................TACCACCATTCGAAATCAGTGC............................. 22 1 20.00 0.00 0.00 20.00 0.00 ...............................................................................TAGCACCATTCGAGATCAGTGCT............................ 23 1 20.00 0.00 0.00 20.00 0.00 ...............................................................................CAGCACCATTCGAAATCAGTGC............................. 22 1 20.00 0.00 0.00 20.00 0.00 ...............................................................................TAGCACCATTCGAAAGCAGTGCT............................ 23 1 19.00 0.00 0.00 19.00 0.00 ...............................................................................TAGAACCATTCGAAATCAGTGCT............................ 23 1 19.00 0.00 0.00 19.00 0.00 ...............................................................................TAGCACCATTCGAAATAAGTGC............................. 22 1 19.00 0.00 0.00 19.00 0.00 ...............................................................................TAGCAGCATTCGAAATCAGTGCT............................ 23 1 18.00 0.00 0.00 18.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGCGT............................. 22 1 18.00 0.00 0.00 18.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTACT............................ 23 1 18.00 0.00 0.00 18.00 0.00 ...............................................................................TAGCACCATTCGAAATCATTGCT............................ 23 1 18.00 0.00 0.00 18.00 0.00 ...............................................................................TAGCACCATTCGAAATCGGTGCT............................ 23 1 18.00 0.00 0.00 18.00 0.00 ...............................................................................TAGCACCATGCGTAATCAGTGCT............................ 23 1 17.00 0.00 0.00 17.00 0.00 ...............................................................................TAGCACCAGTCGAAATCAGTGCT............................ 23 1 17.00 0.00 0.00 17.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGCG............................ 23 1 17.00 0.00 0.00 17.00 0.00 ...............................................................................TAGCACCATTCGAAATCATTGC............................. 22 1 17.00 0.00 0.00 17.00 0.00 ...............................................................................AAGCACCATTCGAAATCAGTGCT............................ 23 1 17.00 0.00 0.00 17.00 0.00 ................................................................................AGCACCATTCGAAATCAGTGC............................. 21 1 17.00 0.00 0.00 17.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTGTA............................ 23 1 16.00 0.00 0.00 16.00 0.00 ...............................................................................TAGCACCATTCGAAGTCAGTGC............................. 22 1 16.00 0.00 0.00 16.00 0.00 ...............................................................................TAGCACCATTCGAATTCAGTGCT............................ 23 1 16.00 0.00 0.00 16.00 0.00 ...............................................................................TAGCACAATTCGAAATCAGTGC............................. 22 1 16.00 0.00 0.00 16.00 0.00 ...............................................................................TAGCACCATCCGAAATCAGTGC............................. 22 1 15.00 0.00 0.00 15.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTA.............................. 21 1 14.00 1.00 0.00 13.00 0.00 ...............................................................................GAGCACCATTCGAAATCAGTGCT............................ 23 1 14.00 0.00 0.00 14.00 0.00 ...............................................................................TAGCGCCATTCGAAATCAGTGC............................. 22 1 14.00 0.00 0.00 14.00 0.00 ...............................................................................TAGCACCATGCGAAATCAGTGC............................. 22 1 14.00 0.00 0.00 14.00 0.00 ...............................................................................TATCACCATTCGAAATCAGTGC............................. 22 1 14.00 0.00 0.00 14.00 0.00 ...............................................................................TAGCACCATTCGAAATCCGTGCT............................ 23 1 14.00 0.00 0.00 14.00 0.00 ...............................................................................TAGCATCATTCGAAATCAGTGC............................. 22 1 14.00 0.00 0.00 14.00 0.00 ...............................................................................TAGCACCACTCGAAATCAGTGC............................. 22 1 14.00 0.00 0.00 14.00 0.00 ...............................................................................TAGCACCCTTCGAAATCAGTGCT............................ 23 1 13.00 1.00 0.00 12.00 0.00 ...............................................................................TAGAACCATTCGAAATCAGTGC............................. 22 1 13.00 0.00 0.00 13.00 0.00 .................................................................................GCACCATTCGAAATCAGTGCT............................ 21 1 13.00 0.00 0.00 13.00 0.00 ...............................................................................TAGCACCATTCGAAATTAGTGCT............................ 23 1 13.00 0.00 0.00 13.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTTCT............................ 23 1 13.00 0.00 0.00 13.00 0.00 ...............................................................................TGGCACCATTCGAAATCAGTGC............................. 22 1 13.00 0.00 0.00 13.00 0.00 ...............................................................................TAGCACCATTCGGAATCAGTGC............................. 22 1 12.00 0.00 0.00 12.00 0.00 ...............................................................................TAGCACCATTCGAAAACAGTGCT............................ 23 1 12.00 0.00 0.00 12.00 0.00 ...............................................................................TAGCACCATTCGAAATCAGTAC............................. 22 1 12.00 0.00 0.00 12.00 0.00 ...............................................................................TAGCAACATTCGAAATCAGTGC............................. 22 1 12.00 0.00 0.00 12.00 0.00 ...............................................................................TAGCACCATTTGAAATCAGTGCT............................ 23 1 12.00 0.00 0.00 12.00 0.00

droPer1 - 0 hit found

droWil1 - 1 hit found