dme-mir-282- 12- and 20-way alignments

dme-mir-282	chr3L:3251022-3251118 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 3251038-3251059
   star strand at position 3251081-3251102
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr3L:3251007-3251133 +	CCGTTCTT------TAA-C----------TATAGTTTCCTTCTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGC------------------GAAAACGGA
droSim1	chr3L:2784381-2784507 +	CCGTTCTT------AAA-C----------TAAAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGC------------------GAAAACGGA
droSec1	super_2:3244745-3244871 +	CCGTTCTT------AAA-A----------TAAAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAACAATCAGC------------------GAAAACGGA
droYak2	chr3L:3795918-3796050 +	TCGTTCTATATCCGTTATA-----------TCAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TACGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAAAAATCAGC------------------GAAAACGGA
droEre2	scaffold_4784:5933708-5933834 +	TCGTTCTA------TCA-C----------CACAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCAAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAAGCAGC------------------GAAAACGGA
droAna3	scaffold_13337:7556585-7556720 +	CCGTTCTA-ATTCG-AAAATC--------GAAAATTTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGTCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGACAAGACATC----------------ACAAAAACGGA
dp4	chrXR_group8:3299974-3300083 -	-----------------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATC------------------AAAAGCGGA
droPer1	super_65:103931-104040 -	-----------------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATC------------------AAAAGCGGA
droWil1	Unknown	CCTTTATG------TAA-T----------ATTAATATCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGGA------TTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGAGAAAATACAAC------------------A--------
droVir3	scaffold_12758:910696-910830 -	TTTTTTTC------AAGGGGCGGCGTCCGACAAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAT-ATACGGTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGGG-ACAAGCAGC------------------GAGGGCG--
droMoj3	scaffold_6680:1963284-1963406 -	attttttt-ttGCG----G----------TG-CATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAT-ATAAGATCAGACATAGCCTATGAGAGGTTAGGTGTAGCAAGGGGT-CAAACAGC------------------AGA----GA
droGri2	scaffold_15110:607062-607202 +	TCT------------CAAA----------TG-GAATTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCACTTTTTCA-ATTCAATCAGACATAGCCTATGAGAGGTTAGGTGTACAAATGGATCAAAGCAACAAGGCTGCTGTCGGGGACTAAAAATGA

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr3L:3251007-3251133 +	NA	CC------------------------GTTCTTTAA-C-------TA------TAGTTTCCTTCTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGCG------------------AAAACGGA
droSim1	chr3L:2784381-2784507 +	4	CC------------------------GTTCTTAAA-C-------TA------AAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGCG------------------AAAACGGA
droSec1	super_2:3244745-3244871 +	1	CC------------------------GTTCTTAAA-A-------TA------AAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAACAATCAGCG------------------AAAACGGA
droYak2	chr3L:3795918-3796050 +	5	TC------------------------GTTCTATATCC-------GT-TATATCAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TACGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAAAAATCAGCG------------------AAAACGGA
droEre2	scaffold_4784:5933708-5933834 +	1	TC------------------------GTTCTATCA-C-------CA------CAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCAAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAAGCAGCG------------------AAAACGGA
droEug1	scf7180000409466:975797-975923 +	1	CC------------------------GTTATACAC-C-------GA------GAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCTAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAAAAGTCAGCA------------------AAAACGGA
droBia1	scf7180000302428:2604017-2604144 +	1	GT-----------------AC----CCTTCTAAGT----------GC-----AGATTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAA--CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAATCATCG------------------GAATCGGA
droTak1	scf7180000415378:123710-123845 -	1	CC------------------------ATTCTAAAT-CGAGAATCTGC-----AATCTACCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-TCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAATCATCA-----------------GAAAACGGA
droEle1	scf7180000491249:2016913-2017039 -	1	CT------------------------GTTCTAACT-C-------AA------GAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAAAGCATCA------------------AAAACGGC
droRho1	scf7180000757706:21549-21675 -	1	CC------------------------GTTCTAATC-C-------AA------TAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAA-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACAAAGGCGAAAAATCAGCA------------------AAAACGGA
droFic1	scf7180000454105:1571232-1571357 +	1	CC------------------------GTTCTGG-C-C-------GA------GAATCTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAAAGAGCAGCG------------------AAGAGGGC
droKik1	scf7180000302391:353031-353159 +	1	CC------------------------GTTCTGAATCC-------GA------GAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAT-CCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAATGTGCAGCG-----------------AAAGGCGGA
droAna3	scaffold_13337:7556585-7556720 +	2	CC------------------------GTTCTAATT-CGAAAATCGA------AAATTTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAAAG-TCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGACAAGACATCA----------------CAAAAACGGA
droBip1	scf7180000395543:216902-217046 +	2	CGTGTGGGCGTGGCAATATGCTCTACGTTCTAAAT-C-------GA------AAATTTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGTT--TTC--------GATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCAAA-AGTCATCA----------------TTAAAACGGA
dp4	chrXR_group8:3299974-3300083 -	1	--------------------------------------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATCA------------------AAAGCGGA
droPer1	super_65:103931-104040 -	1	--------------------------------------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATCA------------------AAAGCGGA
droWil1	scaffold_181136:1999668-1999787 +	1	TT------------------------TTCCTTTAT-G-------TAATATTAATATATCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGGA------TTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGAGAAAATACAACA--------------------------
droVir3	scaffold_12758:910696-910814 -	1	GC------------------------GTCCGAC-------------------AAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGATAT-ACGGTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGGGAC-AAGCAGCG------------------AGGGCG--
droMoj3	scaffold_6680:1963284-1963406 -	2	AT------------------------TTTTTTTTGCG-------GT------GCATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGATAT-AAGATCAGACATAGCCTATGAGAGGTTAGGTGTAGCAAGGGGTCA-AACAGCA------------------GA----GA
droGri2	scaffold_15110:607073-607202 +	1	--------------------------------------------------------TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCACTTTTTCAAT-TCAATCAGACATAGCCTATGAGAGGTTAGGTGTACAAATGGATCAAAGCAACAAGGCTGCTGTCGGGGACTAAAAATGA

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

CCGTTCTT------TAA-C----------TATAGTTTCCTTCTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGC------------------GAAAACGGA

Size

Hit Count

Total Norm

droSim1

CCGTTCTT------AAA-C----------TAAAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGC------------------GAAAACGGA	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	877.50	345.00	327.50	58.00	147.00
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	319.50	312.50	0.50	0.00	6.50
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	214.00	197.00	7.00	0.00	10.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	77.50	2.00	52.50	4.50	18.50
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	52.00	1.50	31.00	11.00	8.50
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	49.50	3.00	21.50	2.50	22.50
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	16.50	2.50	8.00	2.50	3.50
..............................................................................................ACATAGCCTATAAGAGGTTAG..................................................	21	2	15.50	5.00	3.50	1.00	6.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	14.50	0.00	9.00	1.50	4.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	13.00	1.00	5.00	5.50	1.50
..............................................................................................ACATAGCCTATAAGAGGTTAGGT................................................	23	2	11.00	8.50	2.50	0.00	0.00
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	10.50	0.00	6.50	1.00	3.00
...................................................CCTCTACTAGGCTTTGTCT...............................................................................................	19	2	10.00	0.50	5.50	3.00	1.00
....................................................CTCTACTAGGCTTTGTCC...............................................................................................	18	2	7.50	0.00	4.00	1.50	2.00
..............................................................................................ACATAGCCTATAAGAGGTTAGT.................................................	22	2	5.50	4.50	1.00	0.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGAC...............................................	24	2	5.50	0.00	2.50	2.00	1.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	4.50	0.50	2.50	0.00	1.50
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	4.50	0.00	2.50	0.00	2.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	4.50	1.50	2.00	0.50	0.50
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	3.00	3.00	0.00	0.00	0.00
................................................TATCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	2.50	0.00	1.50	0.00	1.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGAT...............................................	24	2	2.50	0.00	1.50	0.00	1.00
..............................................................................................ACATAGCCTATAAGAGGTT....................................................	19	2	2.00	2.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	2.00	0.50	0.50	0.50	0.50
......................................................................GTGCA--TTCGAA-AGCCGATCAG.......................................................................	21	2	2.00	0.50	1.00	0.00	0.50
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	2.00	2.00	0.00	0.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTACG.................................................	22	2	2.00	2.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCAA..............................................................................................	23	2	2.00	1.50	0.00	0.00	0.50
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	2.00	1.00	0.50	0.00	0.50
.................................................AGCCTCTACTAGGCTTTGTCTG..............................................................................................	22	2	2.00	0.50	0.00	0.00	1.50
................................................TAGCCTCTACTAGGCTTTGTCTGT.............................................................................................	24	2	2.00	0.00	2.00	0.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTGAGG.................................................	22	2	2.00	2.00	0.00	0.00	0.00
................................................TAGCCTCTACTATGCTTTGTCA...............................................................................................	22	2	1.50	1.50	0.00	0.00	0.00
................................................TAGCCTCCACTAGGCTTTGTCT...............................................................................................	22	2	1.50	1.00	0.00	0.00	0.50
..............................................................................................ACATAGCCTATCAGAGGTTAGG.................................................	22	2	1.50	1.50	0.00	0.00	0.00
................................................TATCCTCTACTAGGCTTTGTC................................................................................................	21	2	1.50	0.00	1.00	0.00	0.50
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	1.50	0.00	1.50	0.00	0.00
................................................TAGCCTCTACTAGGATTTGTCA...............................................................................................	22	2	1.50	1.50	0.00	0.00	0.00
...............................................................................................CATAGCCTATAAGAGGTTAGG.................................................	21	2	1.50	1.50	0.00	0.00	0.00
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	1.50	0.00	0.00	0.00
.............................................................................................GACATAGCCTATAAGAGGTTAGG.................................................	23	2	1.50	1.50	0.00	0.00	0.00
..............................................................................................ACATAGCCTATAAGCGGTTAGG.................................................	22	2	1.50	1.50	0.00	0.00	0.00
....................................................CTCTACTAGGCTTTGTCG...............................................................................................	18	2	1.50	0.00	0.50	1.00	0.00
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	1.50	1.00	0.00	0.00	0.50
................................................TAGCCTCTACTAxGCTTTGT.................................................................................................	19	2	1.50	0.00	0.00	0.00	1.50
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	1.50	1.00	0.50	0.00	0.00
................................................TAGCCTCTACTCGGCTTTGTCA...............................................................................................	22	2	1.50	1.50	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	1.50	0.00	0.50	0.50	0.50
.................................................AGCCTCTACTAGGCTTTGTCTGT.............................................................................................	23	2	1.50	0.00	0.00	0.50	1.00

droSec1

CCGTTCTT------AAA-A----------TAAAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAACAATCAGC------------------GAAAACGGA	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	6723.00	202.50	4100.00	2420.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	1460.50	3.00	1382.50	75.00
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	599.50	46.50	230.50	322.50
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	362.00	3.00	243.50	115.50
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	190.50	5.50	126.50	58.50
..............................................................................................ACATAGCCTATAAGAGGTTAG..................................................	21	2	79.00	25.50	27.50	26.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGT................................................	23	2	45.00	3.50	15.00	26.50
..............................................................................................ACATAGCCTATAAGAGGTTAGT.................................................	22	2	35.00	12.50	8.00	14.50
..............................................................................................ACATAGCCTATAAGAGGTT....................................................	19	2	23.50	0.00	4.00	19.50
................................................TAGCTTCTACTAGGCTTTGTCT...............................................................................................	22	2	17.00	0.00	15.00	2.00
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	16.50	0.00	11.50	5.00
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	16.00	0.00	16.00	0.00
................................................TAGCxxCTACTAGGCTTTGTCT...............................................................................................	20	2	15.00	0.00	14.00	1.00
................................................TAGCCTCTACTAGGTTTTGTCT...............................................................................................	22	2	14.50	0.50	13.00	1.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	13.50	1.00	5.00	7.50
................................................TAGCCTCTATTAGGCTTTGTCT...............................................................................................	22	2	13.50	0.00	12.50	1.00
.............................................................................................GACATAGCCTATAAGAGGTTAGG.................................................	23	2	13.00	1.00	5.00	7.00
................................................TAGTCTCTACTAGGCTTTGTCT...............................................................................................	22	2	11.50	0.00	11.00	0.50
................................................TAGCCTCTACTAGGCxTTGTCT...............................................................................................	21	2	11.50	0.00	11.50	0.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	11.50	0.00	6.00	5.50
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	11.50	0.00	8.00	3.50
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	11.00	1.00	5.50	4.50
...............................................................................................CATAGCCTATAAGAGGTTAGG.................................................	21	2	9.50	1.00	4.50	4.00
................................................TAGCCTTTACTAGGCTTTGTCT...............................................................................................	22	2	9.00	0.00	8.50	0.50
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	9.00	1.00	5.00	3.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	8.50	1.50	0.00	7.00
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	8.00	0.00	4.00	4.00
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	8.00	0.00	5.50	2.50
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	8.00	0.00	6.00	2.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	8.00	0.50	6.00	1.50
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	8.00	1.00	1.00	6.00
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	7.50	0.50	4.00	3.00
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	7.00	0.50	4.50	2.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	7.00	0.00	5.50	1.50
................................................TAGCCTCCACTAGGCTTTGTCT...............................................................................................	22	2	6.50	0.00	3.00	3.50
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	6.50	0.00	5.00	1.50
................................................TAGCCCCTACTAGGCTTTGTCA...............................................................................................	22	2	6.50	0.00	6.50	0.00
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	6.00	0.00	2.50	3.50
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	6.00	1.50	2.50	2.00
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	5.50	2.50	1.00	2.00
................................................................................................ATAGCCTATAAGAGGTTAGG.................................................	20	2	5.50	0.00	2.50	3.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	5.50	0.00	4.50	1.00
..............................................................................................ACATAGCCTATAAGAGGTTAGA.................................................	22	2	5.50	1.50	2.00	2.00
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	5.50	1.00	2.50	2.00
................................................TAGCCTCTACTAGGCCTTGTCA...............................................................................................	22	2	5.50	0.00	5.50	0.00
................................................TAGCTTCTACTAGGCTTTGT.................................................................................................	20	2	5.50	0.50	5.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGA................................................	23	2	5.00	1.50	2.00	1.50
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	5.00	0.00	3.50	1.50
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	5.00	0.00	1.50	3.50
................................................TAGCCTCTACTAGGCTTTGTCTGT.............................................................................................	24	2	5.00	2.00	1.00	2.00
.................................................................................................................AGGTCTxCCAAGGTGAACA.................................	18	2	5.00	0.00	0.50	4.50
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.50	4.00
.............................................................................................GACATAGCCTATAAGAGGTT....................................................	20	2	4.50	0.50	0.50	3.50
.............................................................................................GACATAGCCTATAAGAGGTTAG..................................................	22	2	4.50	1.00	0.50	3.00
................................................TAGTCTCTACTAGGCTTTGTCA...............................................................................................	22	2	4.50	0.00	4.50	0.00
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	4.50	0.50	2.50	1.50
................................................TAGCCTCTATTAGGCTTTGTCA...............................................................................................	22	2	4.50	0.00	4.50	0.00
................................................TAGCTTCTACTAGGCTTTGTCA...............................................................................................	22	2	4.50	0.00	4.50	0.00
................................................TTGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	4.00	0.00
................................................TAGCCTCTACTAGACTTTGTCT...............................................................................................	22	2	4.00	0.50	0.50	3.00
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	4.00	1.00	2.00	1.00
................................................TAGCCTCTACTAGGCTTTGTCAA..............................................................................................	23	2	4.00	0.00	3.50	0.50
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	4.00	0.00	4.00	0.00
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	4.00	0.00	2.50	1.50
................................................TAGCCTCTACAAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	2.50	1.50
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	4.00	0.00	1.50	2.50
......................................................................GTGCA--TTCGAA-AGCCGATCAG.......................................................................	21	2	3.50	2.00	1.00	0.50
................................................TAGCCTCTACTAGGCTTTGACT...............................................................................................	22	2	3.50	0.00	1.50	2.00
................................................TAGCCTCTACTAGGCTTTGTTT...............................................................................................	22	2	3.50	0.00	3.00	0.50
................................................TAGTCTCTACTAGGCTTTGT.................................................................................................	20	2	3.50	0.00	3.00	0.50
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	3.50	0.00	1.50	2.00
................................................TAGCCTCAACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	1.00	2.00
................................................TCGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	2.00	1.00
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	2.00	1.00
................................................TAGCCTTTACTAGGCTTTGTCA...............................................................................................	22	2	3.00	0.50	2.50	0.00
................................................TAGCCTCTxCTAGGCTTTGTCT...............................................................................................	21	2	3.00	0.00	2.00	1.00
................................................TAGCCTCTACTAGGCTTTTTCA...............................................................................................	22	2	3.00	0.00	3.00	0.00
..................................................GCCTCTACTAGGCTTTGTCT...............................................................................................	20	2	3.00	0.00	2.50	0.50
..............................................................................................ACATAGCTTATAAGAGGTTAGG.................................................	22	2	3.00	0.00	3.00	0.00
................................................TAGCCTCTACTGGGCTTTGTCA...............................................................................................	22	2	3.00	0.00	2.50	0.50
..............................................................................................ACATAGCCTATAAGAGGTTA...................................................	20	2	2.50	0.00	1.00	1.50
................................................TAGCCTCTACTAGGCTTTGTAA...............................................................................................	22	2	2.50	0.00	2.50	0.00
................................................TAGCCTCTACTAGGTTTTGTCA...............................................................................................	22	2	2.50	0.00	2.50	0.00
................................................TAGCCTCTACTAGGCATTGTCT...............................................................................................	22	2	2.50	0.00	2.50	0.00
................................................TAGCCTCTACTAGGCxTTGTCA...............................................................................................	21	2	2.50	0.00	2.50	0.00
..............................................................................................ACATAGTCTATAAGAGGTTAGG.................................................	22	2	2.50	0.00	2.00	0.50
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	2.50	0.00	1.50	1.00
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	2.00	0.00	1.00	1.00
..............................................TCTAGCCTCTACTAGGCTTTGTCT...............................................................................................	24	2	2.00	0.00	1.00	1.00
................................................TAGCCTCTACTTGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	2.00	0.00
................................................TGGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	2.00	0.00	2.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGG.................................................	22	2	2.00	0.50	0.00	1.50
.................................................AGCCTCTACTAGGCTTTGTCA...............................................................................................	21	2	2.00	0.00	2.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGTT...............................................	24	2	2.00	0.00	0.00	2.00
..............................................................................................ACATATCCTATAAGAGGTTAGG.................................................	22	2	2.00	0.50	0.00	1.50
................................................TAGACTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.50
...............................................CTAGCCTCTACTAGGCTTTGTCA...............................................................................................	23	2	1.50	0.00	1.50	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAG..................................................	21	2	1.50	0.00	0.00	1.50
................................................TTGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	1.50	0.00	1.50	0.00
................................................TAGCCACTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	1.50
................................................TAGCCTCTACCAGGCTTTGTCA...............................................................................................	22	2	1.50	0.00	1.50	0.00

droYak2

TCGTTCTATATCCGTTATA-----------TCAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TACGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAAAAATCAGC------------------GAAAACGGA	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2663.50	1273.00	488.50	127.50	755.00	19.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	614.00	603.50	3.50	3.00	4.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	195.00	104.50	14.50	32.50	42.50	1.00
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	97.00	17.50	28.50	11.50	38.50	1.00
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	41.00	14.00	6.00	0.00	21.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAG..................................................	21	2	32.00	3.00	3.50	9.50	15.00	1.00
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	27.00	2.00	16.50	0.00	8.50	0.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	20.50	2.00	3.00	8.50	7.00	0.00
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	16.00	3.00	6.00	0.50	6.50	0.00
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	15.00	1.50	1.00	0.00	1.50	11.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGT................................................	23	2	11.00	4.50	1.00	1.50	3.00	1.00
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	10.50	5.00	1.50	0.00	4.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGT.................................................	22	2	10.00	2.50	1.00	5.00	1.50	0.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	7.50	1.50	0.50	1.00	4.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	7.00	2.00	0.00	0.00	1.50	3.50
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	6.00	2.00	1.00	0.00	3.00	0.00
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	6.00	2.50	1.00	0.00	2.50	0.00
................................................TAGCCTCTACTCGGCTTTGTCA...............................................................................................	22	2	5.50	5.50	0.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	5.50	4.50	0.50	0.00	0.00	0.50
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	5.50	3.50	1.00	0.00	1.00	0.00
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	5.50	3.50	0.50	0.00	1.50	0.00
................................................TAGCCTCGACTAGGCTTTGTCT...............................................................................................	22	2	5.00	0.50	0.50	0.00	4.00	0.00
................................................TAGCCTCTACGAGGCTTTGTCT...............................................................................................	22	2	4.50	0.50	1.50	0.00	2.50	0.00
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	4.50	2.00	0.00	0.00	2.00	0.50
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	4.50	1.50	1.00	0.50	1.50	0.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	4.50	2.50	0.50	0.00	1.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	4.00	1.00	1.00	1.00	1.00	0.00
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	4.00	3.00	0.50	0.50	0.00	0.00
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	4.00	3.50	0.00	0.00	0.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	4.00	3.00	0.50	0.00	0.50	0.00
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	3.50	0.50	1.50	0.00	1.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	3.50	1.00	1.00	0.50	1.00	0.00
................................................TAGCCTCTACTTGGCTTTGTCT...............................................................................................	22	2	3.50	2.00	0.00	0.00	1.50	0.00
................................................TAGCCTCTATTAGGCTTTGTCT...............................................................................................	22	2	3.50	1.50	0.50	0.50	1.00	0.00
.............................................................................................GACATAGCCTATAAGAGGTTAG..................................................	22	2	3.50	0.00	0.00	2.00	1.50	0.00
................................................TAGCCTCTTCTAGGCTTTGTCT...............................................................................................	22	2	3.50	2.00	0.00	0.00	1.50	0.00
................................................TAGCCGCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	1.00	0.00	2.50	0.00
.............................................................................................GACATAGCCTATAAGAGGTTAGG.................................................	23	2	3.00	0.00	0.00	0.50	2.50	0.00
................................................TAGCATCTACTAGGCTTTGTCA...............................................................................................	22	2	3.00	2.50	0.00	0.00	0.50	0.00
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	1.00	1.00	0.00	1.00	0.00
................................................TAGCCTCTACTAGGCGTTGTCT...............................................................................................	22	2	3.00	0.50	1.00	0.00	1.00	0.50
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	3.00	1.50	1.00	0.00	0.50	0.00
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	3.00	1.00	0.00	0.00	2.00	0.00
................................................TAGTCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	1.00	0.50	0.00	1.00	0.00
................................................TAGACTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.50	0.50	0.00	1.50	0.00
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	2.50	1.00	0.00	0.00	0.50	1.00
..............................................................................................ACATAGCCTATAAGAGGTT....................................................	19	2	2.50	0.00	0.50	0.00	2.00	0.00
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	2.50	2.50	0.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGTCTTTTTCT...............................................................................................	22	2	2.50	0.00	1.50	0.00	1.00	0.00
......................................................................GTGCA--TACGAA-AGCCGATCAG.......................................................................	21	2	2.50	0.50	0.50	0.50	0.50	0.50
.................................................AGCCTCTACTAGGCTTTGTCA...............................................................................................	21	2	2.00	2.00	0.00	0.00	0.00	0.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.50	0.00	0.00	0.50	1.00
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	2.00	0.50	0.50	0.00	1.00	0.00
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	2.00	1.00	0.00	0.00	1.00	0.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	2.00	1.00	0.50	0.00	0.50	0.00
..................................................GCCTCTACTAGGCTTTGTCT...............................................................................................	20	2	2.00	0.50	1.00	0.00	0.00	0.50
..............................................................................................ACATAGCCTATAAGAGGTTA...................................................	20	2	2.00	0.00	0.00	1.00	1.00	0.00
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	2.00	1.00	0.00	0.00	1.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTAA.............................................................................................	24	2	2.00	1.00	0.00	0.00	1.00	0.00
................................................TAGCCTCTACTAGGCTTTGTGT...............................................................................................	22	2	2.00	0.50	1.00	0.00	0.50	0.00
................................................TAGCCTCTACTAGGCTGTGTCT...............................................................................................	22	2	2.00	0.50	0.00	0.00	1.50	0.00
.................................................AGCCTCTACTAGGCTTTGTCTGT.............................................................................................	23	2	2.00	0.50	0.50	0.00	0.00	1.00
................................................TAGCCTCTTCTAGGCTTTGTCA...............................................................................................	22	2	2.00	2.00	0.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	2.00	1.00	0.50	0.00	0.50	0.00
................................................TAGCCTCTACTAGGCTTTTTCA...............................................................................................	22	2	2.00	2.00	0.00	0.00	0.00	0.00
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	2.00	0.50	0.50	0.00	1.00	0.00
................................................TAGCCTCTACTAGGATTTGTCA...............................................................................................	22	2	2.00	2.00	0.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	1.50	1.00	0.00	0.00	0.50	0.00
................................................TAGCATATACTAGGCTTTGTCT...............................................................................................	22	2	1.50	1.00	0.00	0.00	0.50	0.00
..............................................................................................ACATAGCCTATAAGCGGTTAGG.................................................	22	2	1.50	1.00	0.00	0.00	0.50	0.00
................................................TAGGCTCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.50	0.50	0.00	0.50	0.00
................................................TAGCCTCTACTAGGCTTTTTC................................................................................................	21	2	1.50	0.00	1.00	0.00	0.50	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGA................................................	23	2	1.50	0.00	0.00	1.00	0.50	0.00
................................................GAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.50	0.00	1.00	0.00
................................................TAGCCTCTACCCGGCTTTGTCT...............................................................................................	22	2	1.50	0.50	1.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTGT.............................................................................................	24	2	1.50	0.00	0.00	0.00	0.50	1.00
................................................TAGCCTCTACTAGGCTTTGTTT...............................................................................................	22	2	1.50	0.00	0.00	0.00	1.50	0.00
.................................................AGCCTCTACTAGGCTTTGTCTG..............................................................................................	22	2	1.50	1.00	0.50	0.00	0.00	0.00
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	1.00	0.00	0.00	0.50	0.00
................................................TAGCCTCTACTCGGCTTTGTCC...............................................................................................	22	2	1.50	1.00	0.00	0.00	0.50	0.00

droEre2

TCGTTCTA------TCA-C----------CACAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCAAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAAGCAGC------------------GAAAACGGA	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4057.50	130.50	1795.50	73.50	2058.00
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	429.00	26.00	57.50	0.00	345.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	156.00	80.50	9.50	51.50	14.50
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	107.00	2.00	23.00	10.50	71.50
..............................................................................................ACATAGCCTATAAGAGGTTAG..................................................	21	2	65.00	1.00	11.50	0.00	52.50
..............................................................................................ACATAGCCTATGAGAGGTTAGG.................................................	22	2	49.50	1.50	0.50	46.50	1.00
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	39.50	5.00	25.50	3.00	6.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	37.50	0.00	11.00	0.00	26.50
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	32.50	0.50	30.00	1.00	1.00
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	30.50	2.00	9.00	0.00	19.50
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	28.50	0.00	1.50	1.00	26.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	22.50	1.00	0.50	0.00	21.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGT................................................	23	2	21.50	0.00	3.50	0.00	18.00
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	21.50	0.00	4.00	0.50	17.00
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	17.50	1.50	2.50	0.00	13.50
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	15.50	0.00	2.00	0.00	13.50
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	14.50	2.00	4.00	0.00	8.50
..............................................................................................ACATAGCCTATAAGAGGTTAGT.................................................	22	2	13.50	0.00	1.50	0.00	12.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	13.00	0.00	2.50	0.50	10.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	13.00	0.50	1.50	1.00	10.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	12.50	0.00	8.50	1.50	2.50
................................................TAGACTCTACTAGGCTTTGTCT...............................................................................................	22	2	12.50	0.00	0.50	0.00	12.00
...................................................CCTCTACTAGGCTTTGTCT...............................................................................................	19	2	10.00	0.00	0.00	0.50	9.50
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	10.00	0.50	4.50	0.00	5.00
..............................................................................................ACATAGCCTATGAGAGGTTAG..................................................	21	2	8.00	0.00	0.50	7.50	0.00
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	8.00	0.50	0.00	0.00	7.50
..............................................................................................ACATAGCCTATAAGAGGTTA...................................................	20	2	7.00	0.00	1.50	0.00	5.50
..............................................................................................ACATAGCCTATAAGAGGTT....................................................	19	2	7.00	0.00	0.50	0.00	6.50
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	7.00	0.00	3.50	0.00	3.50
.............................................................................................GACATAGCCTATAAGAGGTTAGG.................................................	23	2	6.50	1.50	0.00	0.00	5.00
.............................................................................................GACATAGCCTATAAGAGGTTAG..................................................	22	2	6.50	0.00	1.00	0.00	5.50
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	6.50	0.00	4.00	0.00	2.50
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	6.00	0.50	3.50	0.00	2.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	6.00	0.50	2.50	2.00	1.00
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	6.00	0.50	0.50	5.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGT................................................	23	2	5.50	0.00	0.00	5.50	0.00
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	5.50	0.00	2.50	0.00	3.00
................................................TAGCCGCTACTAGGCTTTGTCT...............................................................................................	22	2	5.00	0.00	4.50	0.50	0.00
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	5.00	0.50	2.50	0.00	2.00
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	5.00	0.00	3.50	0.00	1.50
................................................TAGCCTTTACTAGGCTTTGTCT...............................................................................................	22	2	5.00	1.00	2.00	0.00	2.00
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	5.00	1.00	3.00	0.00	1.00
................................................TAACCTCTACTAGGCTTTGTCT...............................................................................................	22	2	5.00	0.50	1.00	0.00	3.50
..............................................................................................ACATATCCTATAAGAGGTTAGG.................................................	22	2	5.00	0.50	0.00	0.00	4.50
................................................TAGCCTCTACGAGGCTTTGTCT...............................................................................................	22	2	4.50	0.50	3.50	0.50	0.00
.............................................................................................GACATAGCCTATAAGAGGTT....................................................	20	2	4.50	0.00	1.00	0.00	3.50
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	4.50	1.00	2.50	0.00	1.00
................................................TAGCTTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	3.00	0.00	1.50
................................................TAGCCTCTACTATGCTTTGTCA...............................................................................................	22	2	4.00	3.00	0.50	0.00	0.50
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	4.00	0.50	1.50	0.50	1.50
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.00	0.50	3.50
................................................TAGTCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	1.00	0.00	3.00
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	4.00	0.00	2.50	0.00	1.50
..............................................................................................ACATAGCCTATAAGAGGTTATG.................................................	22	2	4.00	0.50	0.50	0.00	3.00
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	3.50	1.00	0.50	1.50	0.50
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	3.50	0.00	2.00	0.00	1.50
................................................TAGCCTCTACTTGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	2.00	0.00	1.50
................................................TAGCxxCTACTAGGCTTTGTCT...............................................................................................	20	2	3.50	0.00	1.50	0.00	2.00
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	3.50	0.00	0.50	0.50	2.50
..............................................................................................ACATAGCCTATAATAGGTTAGG.................................................	22	2	3.50	0.00	0.00	0.00	3.50
................................................TAGGCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	0.50	0.00	3.00
..............................................................................................ACATAGCCTATAAGATGTTAGG.................................................	22	2	3.50	1.00	0.50	0.00	2.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	3.00	0.50	1.00	0.00	1.50
................................................TAGCCTCTACTAGACTTTGTCT...............................................................................................	22	2	3.00	0.00	2.00	0.50	0.50
................................................................................................ATAGCCTATAAGAGGTTAGG.................................................	20	2	3.00	0.50	0.00	0.00	2.50
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	1.50	0.00	1.50
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	1.50	0.50	1.00
................................................TAGCCTCTCCTCGGCTTTGTCT...............................................................................................	22	2	3.00	1.00	2.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTTTCA...............................................................................................	22	2	3.00	2.00	0.00	0.00	1.00
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	3.00	0.50	1.00	0.00	1.50
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	1.00	0.50	1.00
................................................TAGCCTCCACTAGGCTTTGTCT...............................................................................................	22	2	2.50	1.50	0.00	0.00	1.00
................................................TAGCCTCTACTAGGCTTTGTTT...............................................................................................	22	2	2.50	0.00	1.00	0.00	1.50
................................................TAGCCTCTACTAGGCTTTGTCAA..............................................................................................	23	2	2.50	0.00	0.00	2.50	0.00
..............................................................................................ACATAGCATATAAGAGGTTAGG.................................................	22	2	2.50	0.00	0.50	0.00	2.00
................................................TAGCCTCTATTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	1.50	0.50	0.50
..................................................GCCTCTACTAGGCTTTGTCT...............................................................................................	20	2	2.50	0.50	2.00	0.00	0.00
..............................................................................................ACATAGACTATAAGAGGTTAGG.................................................	22	2	2.50	0.00	0.00	0.00	2.50
................................................TAGCCTCTACTAGGTTTTGTCT...............................................................................................	22	2	2.00	0.00	1.50	0.00	0.50
..............................................................................................ACATAGCCTATCAGAGGTTAGG.................................................	22	2	2.00	0.50	1.00	0.00	0.50
................................................TCGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	0.50	1.00
................................................TAGCCTCTACTAGGCGTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.00	0.50
..............................................................................................ACATAGCCTATAAGAGGTTAGGA................................................	23	2	2.00	0.00	0.00	0.00	2.00
..............................................TCTAGCCTCTACTAGGCTTTGTCT...............................................................................................	24	2	2.00	0.00	0.50	0.00	1.50
..............................................................................................ACATAGCCTATAAGATGTTAG..................................................	21	2	2.00	0.00	0.00	0.00	2.00
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	2.00	1.00	0.50	0.00	0.50
.................................................TACCTCTACTAGGCTTTGTCT...............................................................................................	21	2	2.00	0.00	0.00	0.00	2.00
................................................AAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	1.50	0.00	0.50
................................................TAGxCTCTACTAGGCTTTGTCT...............................................................................................	21	2	2.00	0.00	0.00	0.00	2.00
..............................................................................................ACATAGCCTATAAGAGGT.....................................................	18	2	2.00	0.00	0.00	0.00	2.00
................................................TAGCCGCTACGAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	1.50	0.00	0.00
................................................TAGCCTCTACTAGGATTTGTC................................................................................................	21	2	1.50	0.00	0.00	0.00	1.50
................................................TAGCCTCTACTAGGxTTTGTCT...............................................................................................	21	2	1.50	0.00	0.00	0.00	1.50
................................................TAGCCTCTACTAGGGTTTGTCT...............................................................................................	22	2	1.50	0.50	0.00	0.00	1.00
..............................................................................................ACATAGCCTATGAGAGGTTAGT.................................................	22	2	1.50	0.00	0.00	1.50	0.00
................................................TATCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	1.50	0.50	0.00	0.50	0.50
..............................................................................................ACATAGCCTATAAGAGGTTAGA.................................................	22	2	1.50	0.00	0.00	0.00	1.50
................................................TAGCCTCTACTCGGCTTTGTC................................................................................................	21	2	1.50	0.00	1.50	0.00	0.00
.............................................................................................GACATAGCCTATGAGAGGTTAGG.................................................	23	2	1.50	0.00	0.00	1.50	0.00
................................................TAGCCTCGACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	1.00	0.00	0.50
................................................TAGCCTCTACTAGGCTTTCTCA...............................................................................................	22	2	1.50	1.50	0.00	0.00	0.00

droAna3

CCGTTCTA-ATTCG-AAAATC--------GAAAATTTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGTCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGACAAGACATC----------------ACAAAAACGGA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	5235.50	588.50	654.50	3368.00	624.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	1484.50	4.50	4.00	21.50	1454.50
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	829.50	84.50	356.00	185.00	204.00
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	320.50	76.50	10.00	223.00	11.00
..............................................................................................ACATAGCCTATAAGAGGTTAG..................................................	21	2	149.50	45.50	33.50	56.50	14.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	84.50	49.50	7.00	27.00	1.00
..............................................................................................ACATAGCCTATAAGAGGTTAGT.................................................	22	2	73.50	21.50	33.00	14.00	5.00
................................................TAGCCTCTACTAGGCTTTTTCA...............................................................................................	22	2	56.50	0.00	0.00	0.00	56.50
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	47.00	1.00	2.00	18.00	26.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	36.50	4.00	27.00	2.00	3.50
..............................................................................................ACATAGCCTATAAGAGGTTAGGT................................................	23	2	36.50	5.50	19.50	8.50	3.00
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	34.50	1.50	0.50	23.50	9.00
................................................TAGCCTCTACTATGCTTTGTCA...............................................................................................	22	2	33.50	0.00	0.00	0.50	33.00
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	32.00	2.00	1.00	18.00	11.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	32.00	0.00	0.00	7.50	24.50
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	27.50	0.50	2.00	23.50	1.50
..............................................................................................ACATAGCCTATAAGAGGTT....................................................	19	2	24.50	0.00	15.00	8.50	1.00
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	24.50	3.00	0.00	17.00	4.50
................................................TAGCCGCTACTAGGCTTTGTCT...............................................................................................	22	2	22.50	0.00	0.00	21.00	1.50
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	22.50	2.00	0.00	3.50	17.00
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	19.00	6.50	5.00	7.00	0.50
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	18.50	2.50	5.00	10.50	0.50
..............................................................................................ACATAGCCTATAAGAGGTTA...................................................	20	2	18.50	1.00	11.00	3.50	3.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	17.50	3.00	6.50	6.50	1.50
..............................................................................................ACATAGCCTATAAGAGGTTATG.................................................	22	2	17.00	2.50	3.00	1.00	10.50
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	16.50	0.00	0.50	12.50	3.50
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	16.50	2.50	3.50	7.00	3.50
................................................TAGACTCTACTAGGCTTTGTCT...............................................................................................	22	2	16.00	0.50	0.50	14.50	0.50
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	15.50	0.50	0.50	10.50	4.00
................................................TAGCCTCTACTCGGCTTTGTCA...............................................................................................	22	2	15.50	0.00	0.00	0.00	15.50
................................................TAGCCTCGACTAGGCTTTGTCT...............................................................................................	22	2	15.00	0.00	0.00	14.50	0.50
................................................TAGCCTCTACGAGGCTTTGTCT...............................................................................................	22	2	15.00	2.00	0.50	12.00	0.50
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	14.00	1.50	2.50	9.50	0.50
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	14.00	1.50	0.50	11.00	1.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	14.00	3.00	4.50	6.00	0.50
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	13.50	0.00	0.00	12.50	1.00
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	12.00	0.00	2.00	9.00	1.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	11.00	0.00	0.50	10.50	0.00
................................................TAGCCTCTACTAGTCTTTGTCA...............................................................................................	22	2	10.00	0.00	0.00	0.00	10.00
.............................................................................................GACATAGCCTATAAGAGGTTAGG.................................................	23	2	10.00	2.00	6.00	1.50	0.50
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	9.50	0.50	1.50	6.50	1.00
................................................GAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	9.50	0.00	0.00	8.50	1.00
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	9.00	3.00	0.00	4.50	1.50
................................................TAGCCTCTACTTGGCTTTGTCT...............................................................................................	22	2	9.00	2.00	0.00	5.50	1.50
................................................TAGCCTCTACTAGACTTTGTCT...............................................................................................	22	2	9.00	2.00	0.50	4.50	2.00
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	8.50	0.00	0.00	6.00	2.50
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	8.50	0.00	0.50	8.00	0.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	8.00	0.00	0.00	6.50	1.50
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	8.00	0.00	0.00	6.50	1.50
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	8.00	1.50	0.50	5.50	0.50
................................................TAGCCTCTACTAGGCTTTGTTT...............................................................................................	22	2	8.00	1.50	1.00	4.00	1.50
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	7.50	0.50	0.50	0.00	6.50
................................................TAGCCTCTACTAGGCTTTCTCA...............................................................................................	22	2	7.50	0.00	0.00	0.00	7.50
................................................TAGTCTCTACTAGGCTTTGTCT...............................................................................................	22	2	7.50	1.00	3.00	2.00	1.50
..............................................................................................ACATATCCTATAAGAGGTTAGG.................................................	22	2	7.00	1.50	4.00	0.00	1.50
................................................TAGCCGCTACGAGGCTTTGTCT...............................................................................................	22	2	7.00	0.00	0.00	7.00	0.00
................................................TCGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	7.00	1.50	0.00	4.50	1.00
................................................TAACCTCTACTAGGCTTTGTCT...............................................................................................	22	2	7.00	1.00	0.00	4.00	2.00
.............................................................................................GACATAGCCTATAAGAGGTTAG..................................................	22	2	7.00	1.00	5.50	0.00	0.50
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	6.50	0.00	0.50	5.00	1.00
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	6.50	0.00	0.00	5.00	1.50
................................................AAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	6.50	0.00	0.00	6.50	0.00
................................................TAGCCTCTACTAGGCGTTGTCT...............................................................................................	22	2	6.50	2.00	0.00	4.00	0.50
................................................TAGCCTCTACTAGGCTTTGTGT...............................................................................................	22	2	6.50	2.00	1.50	1.50	1.50
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	6.00	0.00	0.50	3.50	2.00
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	6.00	0.00	1.50	4.00	0.50
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	6.00	0.00	1.00	4.50	0.50
................................................TAGCCTCTACTAGGCTGTGTCT...............................................................................................	22	2	6.00	0.00	0.00	6.00	0.00
................................................TAGCGTCTACTAGGCTTTGTCT...............................................................................................	22	2	5.50	0.00	0.00	5.00	0.50
................................................TAGCCTCTACTAGCCTTTGTCA...............................................................................................	22	2	5.50	0.00	0.00	0.00	5.50
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	5.00	0.00	0.00	3.50	1.50
......................................................................GTGCA--TTCGAA-AGTCGATCAG.......................................................................	21	2	5.00	2.00	2.00	0.00	1.00
................................................TAGCCTTTACTAGGCTTTGTCT...............................................................................................	22	2	5.00	0.00	0.50	4.00	0.50
................................................TAGCCTCTACTAGGCTTTGTCAA..............................................................................................	23	2	5.00	0.00	0.00	0.50	4.50
................................................TAGCCTCTTCTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.00	4.00	0.50
................................................TAGCCTCTACTGGGCTTTGTCA...............................................................................................	22	2	4.50	0.00	0.00	0.00	4.50
.................................................AGCCTCTACTAGGCTTTGTCTGT.............................................................................................	23	2	4.50	0.00	3.00	1.00	0.50
................................................TAGCCTCCACTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.00	4.00	0.50
................................................TAGCCTCTACTACGCTTTGTCA...............................................................................................	22	2	4.00	0.00	0.00	0.00	4.00
..............................................................................................ACATAGCCTATAAGATGTTAGG.................................................	22	2	4.00	1.00	1.00	0.50	1.50
................................................TAGCCTCGACGAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.00	4.00	0.00
................................................TAGCCTCTACTAGGCTTCGTCA...............................................................................................	22	2	4.00	0.00	0.00	0.50	3.50
..............................................................................................ACATAGCCTATAAGAGGTTACG.................................................	22	2	4.00	0.50	0.50	1.50	1.50
................................................TAGCCTCTATTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.50	3.00	0.50
..............................................................................................ACATAGCCTATAAGAGGGTAGG.................................................	22	2	3.50	0.00	0.00	1.50	2.00
................................................TAGCCTCTCCTAGGCTTTGTCA...............................................................................................	22	2	3.50	0.00	0.00	0.00	3.50
................................................TAGCATCTACTGGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	0.00	3.50	0.00
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.50	0.50	1.00	1.50
.............................................................................................GACATAGCCTATAAGAGGTT....................................................	20	2	3.50	1.00	2.00	0.50	0.00
................................................TAGCCGCTACTAGGCTTTGTCA...............................................................................................	22	2	3.50	0.00	0.00	0.00	3.50
................................................TAGCCTCTACTAGGATTTGTCA...............................................................................................	22	2	3.50	0.00	0.00	0.50	3.00
................................................TATCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	3.50	0.50	2.00	1.00	0.00
................................................TAGCCTGTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	1.00	0.00	2.50	0.00
................................................TAGCCTCTAGTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	0.00	3.50	0.00
................................................TAGCCGCTACTGGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	0.00	3.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTGT.............................................................................................	24	2	3.00	1.00	1.00	1.00	0.00
................................................TAGCCTCTACTAGGTTTTGTCT...............................................................................................	22	2	3.00	0.50	0.50	1.00	1.00
..............................................................................................ACATAGCCTATAATAGGTTAGG.................................................	22	2	3.00	0.00	2.00	0.00	1.00
................................................TAGCCTCTACTAGGCTTTGCCA...............................................................................................	22	2	3.00	0.00	0.00	0.00	3.00
................................................TAGCCCCTACTAGGCTTTGTCA...............................................................................................	22	2	3.00	0.00	0.00	0.00	3.00

dp4

-----------------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATC------------------AAAAGCGGA	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4382.50	145.00	786.50	3431.50	19.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	391.50	1.50	365.50	24.50	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	255.00	47.50	56.50	151.00	0.00
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	138.00	10.00	8.00	120.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAG..................................................	21	2	55.50	16.50	1.00	38.00	0.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	35.50	4.00	1.50	30.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGT................................................	23	2	25.50	6.50	3.00	16.00	0.00
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	21.50	0.00	7.50	14.00	0.00
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	18.50	0.00	2.00	16.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	15.50	0.00	3.00	11.00	1.50
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	14.50	0.00	6.50	8.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGT.................................................	22	2	14.50	7.50	1.00	6.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	13.50	1.50	0.50	11.50	0.00
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	11.00	0.00	5.50	5.50	0.00
................................................TAACCTCTACTAGGCTTTGTCT...............................................................................................	22	2	10.50	0.50	2.00	8.00	0.00
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	10.00	0.00	5.50	4.50	0.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	9.50	1.00	1.50	7.00	0.00
................................................TAGCCGCTACTAGGCTTTGTCT...............................................................................................	22	2	9.00	0.00	3.00	6.00	0.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	8.50	0.00	3.00	5.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	8.00	0.00	2.50	5.00	0.50
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	7.50	0.00	1.00	6.50	0.00
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	7.50	0.00	1.00	6.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	7.50	0.00	5.00	2.50	0.00
................................................TAGCCTCTACTTGGCTTTGTCT...............................................................................................	22	2	7.50	0.00	4.00	3.50	0.00
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	7.00	0.50	1.00	5.50	0.00
..............................................................................................ACATAGCCTATAAGAGGTT....................................................	19	2	7.00	0.00	1.50	5.50	0.00
................................................TAGCCTCTACGAGGCTTTGTCT...............................................................................................	22	2	7.00	0.00	1.50	5.50	0.00
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	7.00	0.50	1.00	5.50	0.00
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	7.00	0.00	2.00	5.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGG.................................................	22	2	6.50	0.00	6.00	0.50	0.00
.............................................................................................GACATAGCCTATAAGAGGTTAG..................................................	22	2	6.00	2.00	2.00	2.00	0.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	6.00	0.00	0.00	6.00	0.00
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	6.00	0.00	0.50	5.50	0.00
................................................TAGACTCTACTAGGCTTTGTCT...............................................................................................	22	2	6.00	0.00	1.50	4.50	0.00
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	5.50	0.00	0.50	5.00	0.00
................................................TAGCCTCGACTAGGCTTTGTCT...............................................................................................	22	2	5.50	0.00	1.00	4.50	0.00
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	5.50	0.00	1.00	4.50	0.00
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	5.00	0.00	2.00	3.00	0.00
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	5.00	0.00	4.50	0.50	0.00
................................................TAGCCTCTACTAGACTTTGTCT...............................................................................................	22	2	5.00	0.00	0.50	4.50	0.00
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	5.00	0.00	0.50	4.50	0.00
................................................TAGCCTCTACTCGGCTTTGTCA...............................................................................................	22	2	5.00	0.00	5.00	0.00	0.00
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	4.50	0.00	1.50	3.00	0.00
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.50	1.00	3.00	0.00
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.50	4.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTA...................................................	20	2	4.50	1.50	0.00	3.00	0.00
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.00	4.00	0.00
.............................................................................................GACATAGCCTATAAGAGGTTAGG.................................................	23	2	4.00	0.00	2.50	1.50	0.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.00	3.50	0.50
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	4.00	1.00	1.00	2.00	0.00
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.50	3.50	0.00
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	4.00	0.00	2.00	2.00	0.00
................................................TAGCCTCTATTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	1.00	2.50	0.00
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	0.50	3.00	0.00
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	2.50	1.00	0.00
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	3.00	0.00	1.00	2.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTGT.............................................................................................	24	2	3.00	0.50	0.00	2.00	0.50
................................................TAGCCTCTACTAGGCTTTGTTT...............................................................................................	22	2	3.00	0.50	0.00	2.50	0.00
................................................TAGTCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	0.00	3.00	0.00
................................................TAGCCTCTTCTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	1.50	1.00	0.00
.................................................AGCCTCTACTAGGCTTTGTCTG..............................................................................................	22	2	2.50	0.00	1.50	1.00	0.00
................................................TAGCCTCTACTAGGATTTGTCA...............................................................................................	22	2	2.50	0.00	2.00	0.50	0.00
................................................TAGCCTCTACTAGGCTTTGACT...............................................................................................	22	2	2.50	0.00	0.50	2.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTC..............................................................................................	23	2	2.00	0.00	1.00	1.00	0.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.50	0.00
................................................TAGCCTCCACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.50	0.00	1.50	0.00
................................................TAGCCTCTACTAGGCTGTGTCT...............................................................................................	22	2	2.00	0.00	1.00	1.00	0.00
................................................TAGCCGCTACGAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.00	2.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	2.00	0.00	1.50	0.50	0.00
................................................TAGCCTCTTCTTGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.50	0.00
................................................AAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.00	2.00	0.00
................................................GAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.00	2.00	0.00
................................................TAGCCTCTACTAGGCCTTGTCA...............................................................................................	22	2	1.50	0.00	1.50	0.00	0.00
..............................................................................................ACATAGACTATAAGAGGTTAGG.................................................	22	2	1.50	0.00	1.00	0.50	0.00
................................................TAGCCTCGACGAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.50	1.00	0.00
................................................TAGCCTCGACTGGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	1.50	0.00
................................................TAGCCTCTAATGGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.50	1.00	0.00
................................................TAGCCTCTACTAGGTTTTGTCT...............................................................................................	22	2	1.50	0.50	0.50	0.50	0.00
................................................TAGCCTCTACTAGGGTTTGTCT...............................................................................................	22	2	1.50	0.00	1.00	0.50	0.00
................................................TAGCATCTACTTGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	1.50	0.00	0.00
................................................TAGCATCTACTGGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	1.00	0.50	0.00
................................................TAGCCACTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	1.00	0.50	0.00
................................................TAGCCTCTACTCGGCTTTTTCT...............................................................................................	22	2	1.50	0.00	0.00	1.50	0.00
................................................TAGCCTCTACTCTGCTTTGTCT...............................................................................................	22	2	1.50	0.00	1.00	0.50	0.00
................................................TAGCCTCTACTATTCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.50	1.00	0.00
................................................TAGCCTCTACTTGGCTTTTTCT...............................................................................................	22	2	1.50	0.00	0.50	1.00	0.00
................................................TAGCCTTTACTAGGCTTTGTCA...............................................................................................	22	2	1.50	0.00	1.50	0.00	0.00

droPer1

-----------------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATC------------------AAAAGCGGA	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2729.00	113.00	465.00	1747.00	390.50	13.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	456.50	0.50	447.50	5.00	3.50	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	230.50	19.50	26.50	92.00	92.50	0.00
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	128.00	7.00	7.00	73.00	40.00	1.00
..............................................................................................ACATAGCCTATAAGAGGTTAG..................................................	21	2	73.50	10.00	1.00	25.00	37.50	0.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	25.00	5.50	2.00	14.50	3.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGT.................................................	22	2	18.00	8.00	0.00	2.50	7.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	15.00	1.00	0.00	8.50	5.50	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGGT................................................	23	2	14.50	1.00	0.00	6.00	7.50	0.00
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	11.50	1.00	1.00	0.50	0.50	8.50
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	10.00	0.00	5.00	4.00	1.00	0.00
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	10.00	0.00	3.00	3.00	4.00	0.00
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	8.50	0.00	1.00	5.50	2.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	8.00	0.00	4.00	2.00	0.50	1.50
..............................................................................................ACATAGCCTATAAGAGGTT....................................................	19	2	7.50	1.00	0.50	2.00	4.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	7.50	0.50	1.00	5.00	1.00	0.00
.............................................................................................GACATAGCCTATAAGAGGTTAG..................................................	22	2	7.50	0.50	0.00	4.50	2.50	0.00
................................................TAGCCGCTACTAGGCTTTGTCT...............................................................................................	22	2	7.00	0.00	0.00	5.50	1.50	0.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	7.00	0.50	1.00	4.50	0.50	0.50
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	6.50	0.00	1.00	4.00	1.50	0.00
................................................TAGCCTCTACTCGGCTTTGTCA...............................................................................................	22	2	6.50	0.00	6.50	0.00	0.00	0.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	6.00	0.00	1.50	2.50	2.00	0.00
.............................................................................................GACATAGCCTATAAGAGGTTAGG.................................................	23	2	5.50	0.50	1.00	1.50	2.50	0.00
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	5.50	0.00	0.50	2.50	2.50	0.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	5.00	0.00	1.00	2.50	1.50	0.00
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	5.00	0.00	1.50	3.50	0.00	0.00
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	5.00	0.00	0.50	3.50	1.00	0.00
................................................TAGCCTCTACGAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.00	1.50	3.00	0.00
................................................TAGCCACTACTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.00	4.50	0.00	0.00
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	1.50	2.50	0.50	0.00
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	4.00	0.00	1.00	2.50	0.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	4.00	0.00	2.00	1.50	0.50	0.00
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.50	2.00	1.50	0.00
..............................................................................................ACATAGCCTATAAGAGGTTA...................................................	20	2	4.00	0.00	0.00	2.50	1.50	0.00
................................................TAGCTTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.50	0.50	1.50	1.00	0.00
................................................TAGCCTCTACTAGGCTTTGTTA...............................................................................................	22	2	3.50	0.00	3.50	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	3.50	0.00	1.50	1.50	0.00	0.50
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	0.50	2.50	0.50	0.00
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	0.00	2.50	0.00	0.50
..............................................................................................ACATAGCCTATAAGCGGTTAGG.................................................	22	2	3.00	0.00	0.00	1.00	2.00	0.00
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	1.50	0.50	1.00	0.00
..............................................................................................ACATAGCCTATAAGAGGGTAGG.................................................	22	2	3.00	0.00	0.00	0.00	3.00	0.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	3.00	0.00	1.00	1.50	0.50	0.00
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	1.00	1.00	1.00	0.00
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	3.00	0.00	0.00	1.50	1.50	0.00
................................................TAGACTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	1.50	1.00	0.50	0.00
................................................TAGCCTCTACTTGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	0.00	2.50	0.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTGT.............................................................................................	24	2	2.50	0.00	0.00	1.50	1.00	0.00
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	0.50	1.50	0.50	0.00
................................................TAACCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	0.00	2.50	0.00	0.00
..................................................GCCTCTACTAGGCTTTGTCT...............................................................................................	20	2	2.50	0.00	1.50	1.00	0.00	0.00
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	2.00	0.00	1.50	0.50	0.00	0.00
................................................TAGCCTCTACTGGGCTTTGTCA...............................................................................................	22	2	2.00	0.00	1.50	0.50	0.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTATG.................................................	22	2	2.00	0.00	0.50	0.50	1.00	0.00
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.00	0.50	0.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.00	2.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTGT...............................................................................................	22	2	2.00	0.00	0.00	2.00	0.00	0.00
................................................TAGCCTCTTCTAGGCTTTGTCA...............................................................................................	22	2	2.00	0.00	2.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTAA...............................................................................................	22	2	2.00	0.50	1.50	0.00	0.00	0.00
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.50	0.00	0.00
......................................................................GTGCA--TTTGAAAACCCGATCAG.......................................................................	22	2	2.00	1.50	0.00	0.00	0.50	0.00
...............................................CTAGCCTCTACTAGGCTTTGTCA...............................................................................................	23	2	2.00	0.00	2.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTGTGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.00	0.50	0.00
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	1.00	0.50	0.00
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.00	1.50	0.50	0.00
................................................TAGCCTCGACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	0.50	1.00	0.00
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.50	0.50	1.00	0.00
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	2.00	0.00	1.00	1.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	1.50	0.50	0.00	1.00	0.00	0.00
................................................TAGCCTCTTCTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.50	0.00	1.00	0.00
...................................................CCTCTACTAGGCTTTGTCT...............................................................................................	19	2	1.50	1.00	0.00	0.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTGGTCT...............................................................................................	22	2	1.50	0.00	0.00	0.00	1.50	0.00
................................................TAGGCTCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	1.00	0.50	0.00
................................................TAGCCTCTACTAGCCTTTGTC................................................................................................	21	2	1.50	0.00	0.00	0.50	1.00	0.00
................................................TAGCATATACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.50	0.50	0.50	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGC.................................................	22	2	1.50	0.00	0.00	1.00	0.50	0.00
................................................TAGCCTCTACTAGGCTTTGTA................................................................................................	21	2	1.50	0.00	0.00	0.50	1.00	0.00
................................................TAGCCTCTACTAGGATTTGTCA...............................................................................................	22	2	1.50	0.00	1.50	0.00	0.00	0.00
..............................................................................................AAATAGCCTATAAGAGGTTAG..................................................	21	2	1.50	0.00	0.00	0.50	1.00	0.00
................................................TAGCCTCTACTCGGCTTTGCCT...............................................................................................	22	2	1.50	0.00	0.50	0.50	0.50	0.00
................................................TAGCCTCTACTAGGCTTTGTTT...............................................................................................	22	2	1.50	0.00	0.00	1.50	0.00	0.00
................................................TAGCAGCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	1.00	0.50	0.00
................................................TAGCCTCTCCTAGCCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	1.50	0.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTACG.................................................	22	2	1.50	0.00	0.00	1.00	0.50	0.00
................................................TAGCATCTACTGGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	1.00	0.50	0.00
................................................TAGCCTCTACTAGGCGTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	0.50	1.00	0.00
................................................TAGCATCTACTAGGCTTTGTCA...............................................................................................	22	2	1.50	0.00	1.50	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTTTC................................................................................................	21	2	1.50	0.00	0.00	0.00	1.50	0.00
................................................TAGCCTCTACTAGGCTTTCTC................................................................................................	21	2	1.50	0.00	0.00	0.50	1.00	0.00
................................................AAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.00	1.50	0.00	0.00
..............................................................................................ACATAGCCTATAAGTGGTTAGG.................................................	22	2	1.50	0.00	0.00	0.50	1.00	0.00
..............................................................................................ACATAGCCTATATGAGGTTAGG.................................................	22	2	1.50	0.00	0.00	0.00	1.50	0.00

droWil1

CCTTTATG------TAA-T----------ATTAATATCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGGA------TTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGAGAAAATACAAC------------------A--------	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	6052.00	116.50	5287.00	486.50	162.00
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	5193.50	2.00	5180.50	11.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGG.................................................	22	2	658.50	25.50	378.50	249.50	5.00
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	267.50	6.00	242.00	16.50	3.00
..............................................................................................ACATAGCCTATGAGAGGTTAG..................................................	21	2	163.50	20.50	83.50	55.50	4.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	124.50	5.00	112.50	6.00	1.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	32.50	0.00	11.00	2.00	19.50
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	28.50	0.00	28.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	25.50	0.00	24.50	0.00	1.00
..............................................................................................ACATAGCCTATGAGAGGTTA...................................................	20	2	22.00	1.00	12.50	8.50	0.00
..............................................................................................ACATAGCCTATGAGAGGTT....................................................	19	2	20.00	2.50	5.00	12.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	19.50	1.00	10.50	5.00	3.00
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	18.50	3.50	2.00	3.00	10.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGT................................................	23	2	18.50	2.00	12.00	4.50	0.00
................................................TAGCCTCTACTAGGCTTTGTCAA..............................................................................................	23	2	18.00	0.00	18.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGT.................................................	22	2	16.50	4.00	3.00	9.50	0.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	15.50	0.00	9.50	2.50	3.50
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	14.00	0.00	12.00	2.00	0.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	13.50	0.50	11.00	2.00	0.00
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	12.00	0.00	11.00	0.50	0.50
................................................TATCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	11.50	0.00	11.50	0.00	0.00
................................................TAGCATCTACTAGGCTTTGTCA...............................................................................................	22	2	11.00	0.00	11.00	0.00	0.00
................................................TAGACTCTACTAGGCTTTGTCT...............................................................................................	22	2	11.00	0.00	9.50	1.50	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGA.................................................	22	2	10.50	0.00	6.50	4.00	0.00
.............................................................................................GACATAGCCTATGAGAGGTTAGG.................................................	23	2	10.00	0.50	5.50	4.00	0.00
................................................TAGACTCTACTAGGCTTTGTCA...............................................................................................	22	2	9.50	0.00	9.50	0.00	0.00
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	9.50	0.00	8.50	1.00	0.00
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	9.50	0.00	6.50	3.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTAA.............................................................................................	24	2	9.50	0.00	9.50	0.00	0.00
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	9.00	0.00	6.50	0.50	2.00
...................................................CCTCTACTAGGCTTTGTCT...............................................................................................	19	2	9.00	0.50	0.50	3.50	4.50
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	8.50	0.00	8.50	0.00	0.00
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	8.50	0.00	6.50	1.00	1.00
...............................................CTAGCCTCTACTAGGCTTTGTCA...............................................................................................	23	2	8.00	0.00	8.00	0.00	0.00
................................................TAGCCTCTACTAGGATTTGTCA...............................................................................................	22	2	8.00	0.00	8.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTAA...............................................................................................	22	2	7.50	0.00	7.50	0.00	0.00
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	7.50	0.00	7.00	0.50	0.00
................................................TAGCCTCTACTAGGCTTTTTCA...............................................................................................	22	2	7.50	0.00	7.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	7.50	0.50	5.50	1.00	0.50
.............................................................................................GACATAGCCTATGAGAGGTTAG..................................................	22	2	7.50	1.00	5.00	1.50	0.00
................................................TAGCCCCTACTAGGCTTTGTCA...............................................................................................	22	2	7.00	0.00	7.00	0.00	0.00
................................................TAGCCTCTACTAGGCCTTGTCA...............................................................................................	22	2	7.00	0.00	7.00	0.00	0.00
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	6.50	0.00	5.50	1.00	0.00
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	6.50	0.00	6.00	0.50	0.00
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	6.00	0.00	5.00	0.50	0.50
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	6.00	0.50	4.50	0.50	0.50
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	6.00	0.00	5.00	0.50	0.50
................................................TAGCCTCTACTAGTCTTTGTCA...............................................................................................	22	2	6.00	0.00	6.00	0.00	0.00
................................................TAGCCTCTACTATGCTTTGTCA...............................................................................................	22	2	5.50	0.00	5.50	0.00	0.00
................................................TAGCCTCCACTAGGCTTTGTCT...............................................................................................	22	2	5.50	0.00	4.00	1.50	0.00
................................................TAGCxxCTACTAGGCTTTGTCT...............................................................................................	20	2	5.50	0.00	5.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGCCA...............................................................................................	22	2	5.50	0.00	5.00	0.50	0.00
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	5.50	0.00	4.00	1.50	0.00
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	5.00	0.00	5.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTATCT...............................................................................................	22	2	5.00	0.00	4.00	1.00	0.00
................................................TCGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	5.00	0.00	5.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	5.00	0.00	3.50	1.50	0.00
................................................TAGCCTCTACCAGGCTTTGTCA...............................................................................................	22	2	4.50	0.00	4.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCAT..............................................................................................	23	2	4.50	0.00	4.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	4.50	0.50	2.00	0.50	1.50
................................................TAGCCTTTACTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	4.50	0.00	0.00
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	3.50	1.00	0.00
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	4.50	0.00	3.00	1.50	0.00
................................................TAGCTTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	3.50	1.00	0.00
................................................CAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	4.00	0.00	4.00	0.00	0.00
................................................TAGCCTCTACTAGGCTCTGTCA...............................................................................................	22	2	4.00	0.00	4.00	0.00	0.00
................................................TAGCCTCCACTAGGCTTTGTCA...............................................................................................	22	2	4.00	0.00	4.00	0.00	0.00
................................................TAGCCTCTACTAxGCTTTGTCT...............................................................................................	21	2	4.00	0.00	0.50	2.50	1.00
................................................TAGTCTCTACTAGGCTTTGTCA...............................................................................................	22	2	4.00	0.00	4.00	0.00	0.00
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	4.00	0.00	0.00
................................................TAGCCTATACTAGGCTTTGTCA...............................................................................................	22	2	4.00	0.00	4.00	0.00	0.00
................................................TAACCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	2.00	1.50	0.50
................................................TAGCCTCTACTAGGCTTTATCA...............................................................................................	22	2	4.00	0.00	4.00	0.00	0.00
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	2.50	1.00	0.00
................................................TAGCCTCTACTAGGTTTTGTCT...............................................................................................	22	2	3.50	0.00	2.50	1.00	0.00
................................................TAGCCTCTACTAGACTTTGTCT...............................................................................................	22	2	3.50	0.00	3.00	0.50	0.00
................................................TAGTCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	2.00	1.50	0.00
................................................TAGCCTCTACTAGGCTTTCTCA...............................................................................................	22	2	3.50	0.00	3.50	0.00	0.00
................................................TAGxCTCTACTAGGCTTTGTCT...............................................................................................	21	2	3.50	0.00	0.50	3.00	0.00
................................................TAGCCTCTAATAGGCTTTGTCA...............................................................................................	22	2	3.50	0.00	3.50	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGAA...............................................	24	2	3.00	0.00	3.00	0.00	0.00
................................................TCGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	3.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	3.00	0.00	2.50	0.00	0.50
................................................TAGCCTCTACTAGGCTTCGTCA...............................................................................................	22	2	3.00	0.00	3.00	0.00	0.00
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	3.00	0.00	2.50	0.50	0.00
.................................................AGCCTCTACTAGGCTTTGTCA...............................................................................................	21	2	3.00	0.00	3.00	0.00	0.00
................................................TAGCCTCTATTAGGCTTTGTCA...............................................................................................	22	2	3.00	0.00	3.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTTA...............................................................................................	22	2	3.00	0.00	3.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGTTTAGG.................................................	22	2	3.00	0.00	0.00	3.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTCGG.................................................	22	2	2.50	0.00	2.00	0.50	0.00
..............................................................................................ACATAGCCTATGAGCGGTTAGG.................................................	22	2	2.50	0.00	1.00	1.50	0.00
..............................................................................................ACATAGCCTATGAGAGGTCAGG.................................................	22	2	2.50	0.00	2.00	0.50	0.00
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	2.50	0.00	2.50	0.00	0.00
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	2.50	0.00	1.00	1.50	0.00
.............................................................................................GACATAGCCTATGAGAGGTT....................................................	20	2	2.50	0.00	0.50	2.00	0.00
................................................TAGCCTCTACTAGGCxTTGTCA...............................................................................................	21	2	2.50	0.00	2.50	0.00	0.00
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	1.50	1.00	0.00
................................................AAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	2.50	0.00	0.00
................................................TAGCTTCTACTAGGCTTTGTCA...............................................................................................	22	2	2.50	0.00	2.50	0.00	0.00
................................................TAGCCTCTACTGGGCTTTGTCA...............................................................................................	22	2	2.50	0.00	2.50	0.00	0.00
....................................................CTCTACTxGGCTTTGGCTGT.............................................................................................	19	2	2.50	0.00	2.50	0.00	0.00

droVir3

TTTTTTTC------AAGGGGCGGCGTCCGACAAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAT-ATACGGTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGGG-ACAAGCAGC------------------GAGGGCG--	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	641.00	113.50	328.00	73.50	76.00	50.00
..............................................................................................ACATAGCCTATGAGAGGTTAGG.................................................	22	2	622.00	230.00	342.50	46.50	2.50	0.50
..............................................................................................ACATAGCCTATGAGAGGTTAG..................................................	21	2	154.00	73.00	71.00	7.50	2.00	0.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	56.00	1.50	2.50	51.50	0.00	0.50
..............................................................................................ACATAGCCTATGAGAGGTTAGGT................................................	23	2	39.00	17.50	16.00	5.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	26.00	1.50	1.50	2.00	10.50	10.50
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	24.00	2.00	4.50	10.50	5.00	2.00
..............................................................................................ACATAGCCTATGAGAGGTTA...................................................	20	2	16.50	2.50	13.50	0.50	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGT.................................................	22	2	16.50	13.00	2.00	1.50	0.00	0.00
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	13.50	0.00	0.00	1.00	5.50	7.00
......................................................................GTGCA--TTCGAT-ATACGGTCAG.......................................................................	21	2	12.00	0.50	0.50	1.50	4.50	5.00
..............................................................................................ACATAGCCTATGAGAGGTT....................................................	19	2	11.50	4.00	7.00	0.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTCC.............................................................................................	24	2	9.50	1.00	0.00	0.00	7.50	1.00
.............................................................................................GACATAGCCTATGAGAGGTTAGG.................................................	23	2	8.50	3.00	4.00	1.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	8.50	1.50	5.50	1.00	0.00	0.50
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	7.50	0.00	0.00	1.50	4.00	2.00
.............................................................................................GACATAGCCTATGAGAGGTTAG..................................................	22	2	6.00	4.00	2.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	5.50	0.00	0.50	5.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTATG.................................................	22	2	5.50	0.50	5.00	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	4.50	1.00	1.00	1.50	1.00	0.00
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	4.00	0.50	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGA.................................................	22	2	4.50	3.00	1.00	0.50	0.00	0.00
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	2.50	0.50	1.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGC.................................................	22	2	4.00	0.50	3.50	0.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTACG.................................................	22	2	4.00	0.00	3.00	1.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	4.00	0.00	1.00	3.00	0.00	0.00
................................................TAGCCTCTACGAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	2.50	0.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	3.00	1.00	1.50	0.00	0.00	0.50
..............................................................................................ACATAGCCTATGAGAGGTGAGG.................................................	22	2	3.00	0.00	3.00	0.00	0.00	0.00
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	0.50	0.00	1.00	1.50
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	2.50	0.00	2.00	0.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCAA..............................................................................................	23	2	2.50	0.00	0.00	2.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTGT.............................................................................................	24	2	2.50	1.50	0.50	0.50	0.00	0.00
..............................................................................................ACATAGCCTATGAGCGGTTAGG.................................................	22	2	2.50	0.50	1.50	0.50	0.00	0.00
....................................................................................................CCTATGAGAGGTTAGG.................................................	16	2	2.50	0.00	2.50	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	2.00	0.00	2.00	0.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTCAGG.................................................	22	2	2.00	1.00	1.00	0.00	0.00	0.00
..............................................................................................ACATACCCTATGAGAGGTTAGG.................................................	22	2	2.00	0.00	1.50	0.50	0.00	0.00
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	1.00	1.00	0.00	0.00
.....................................................TCTACTAGGCTTTGTCTG..............................................................................................	18	2	2.00	0.00	0.00	0.00	1.50	0.50
..............................................................................................ACATAGCCTATGAGAGGGTAGG.................................................	22	2	2.00	0.50	1.50	0.00	0.00	0.00
..............................................................................................ACATAGCATATGAGAGGTTAGG.................................................	22	2	2.00	0.00	1.50	0.50	0.00	0.00
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	2.00	0.00	2.00	0.00	0.00	0.00
..............................................................................................ACATATCCTATGAGAGGTTAGG.................................................	22	2	2.00	1.00	0.50	0.50	0.00	0.00
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	0.00	0.00	0.50	0.50	1.00
...................................................CCTCTACTAGGCTTTGTCT...............................................................................................	19	2	2.00	0.00	0.50	0.50	0.50	0.50
..............................................................................................ACATAGCCTCTGAGAGGTTAGG.................................................	22	2	1.50	0.00	1.00	0.50	0.00	0.00
..............................................................................................ACATAGCCTATGAGAAGTTAGG.................................................	22	2	1.50	1.50	0.00	0.00	0.00	0.00
................................................TAGCCGCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.50	0.50	0.50	0.00	0.00
................................................TAGCCTCTACTAGGTTTTGTCT...............................................................................................	22	2	1.50	1.50	0.00	0.00	0.00	0.00
................................................GAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	0.50	1.00	0.00	0.00
................................................TAGCCTCTACTAGACTTTGTCT...............................................................................................	22	2	1.50	0.50	0.50	0.50	0.00	0.00
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	1.50	0.00	1.00	0.00	0.50	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGA................................................	23	2	1.50	1.50	0.00	0.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGC................................................	23	2	1.50	0.00	1.50	0.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAAG.................................................	22	2	1.50	0.50	0.00	1.00	0.00	0.00
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	1.50	0.00	1.00	0.50	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGTCTAA.............................................................................................	24	2	1.50	0.00	0.00	1.50	0.00	0.00
..............................................................................................ACATAGCCTATGCGAGGTTAGG.................................................	22	2	1.50	0.00	1.50	0.00	0.00	0.00
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	1.50	0.50	1.00	0.00	0.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGTC...............................................	24	2	1.50	0.50	0.00	1.00	0.00	0.00
.............................................................................................GACATAGCCTATGAGAGGTT....................................................	20	2	1.50	0.50	1.00	0.00	0.00	0.00
..............................................................................................ACATAGCCTATGTGAGGTTAGG.................................................	22	2	1.50	0.00	1.50	0.00	0.00	0.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	1.50	0.00	0.50	0.00	1.00	0.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	1.50	0.00	1.00	0.50	0.00	0.00

droMoj3

attttttt-ttGCG----G----------TG-CATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAT-ATAAGATCAGACATAGCCTATGAGAGGTTAGGTGTAGCAAGGGGT-CAAACAGC------------------AGA----GA	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2979.00	737.50	333.50	422.00	1486.00
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	1733.00	66.00	3.50	5.00	1658.50
..............................................................................................ACATAGCCTATGAGAGGTTAGG.................................................	22	2	1287.00	253.00	396.00	260.50	377.50
..............................................................................................ACATAGCCTATGAGAGGTTAG..................................................	21	2	299.50	101.00	97.50	77.00	24.00
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	144.50	62.50	27.00	31.00	24.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGT................................................	23	2	74.50	30.50	20.50	11.00	12.50
..............................................................................................ACATAGCCTATGAGAGGTT....................................................	19	2	65.50	20.00	25.50	16.50	3.50
..............................................................................................ACATAGCCTATGAGAGGTTA...................................................	20	2	52.50	6.00	22.50	18.00	6.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	44.50	37.50	2.50	1.00	3.50
..............................................................................................ACATAGCCTATGAGAGGTTAGT.................................................	22	2	40.50	30.50	4.00	2.50	3.50
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	38.00	0.00	0.50	14.50	23.00
................................................TAGCCTCTACTAGGCTTTGTCTC..............................................................................................	23	2	36.50	9.50	5.00	4.50	17.50
................................................TAGCCTCTACTCGGCTTTGTCA...............................................................................................	22	2	23.00	0.00	0.00	1.00	22.00
.............................................................................................GACATAGCCTATGAGAGGTTAGG.................................................	23	2	21.50	8.00	3.00	2.00	8.50
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	21.50	2.00	2.00	12.50	5.00
.............................................................................................GACATAGCCTATGAGAGGTTAG..................................................	22	2	20.00	8.50	5.50	2.00	4.00
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	19.50	1.00	0.00	0.50	18.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	13.50	3.50	5.50	3.00	1.50
..............................................................................................ACATAGCCTATGAGCGGTTAGG.................................................	22	2	12.00	0.00	4.00	5.50	2.50
..............................................................................................ACATAGCCTATGAGAGGTTATG.................................................	22	2	10.50	0.00	4.00	6.00	0.50
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	10.00	0.50	0.00	0.00	9.50
................................................TAGCCTCTACTAGGCTTTGTCTA..............................................................................................	23	2	9.50	2.00	1.00	0.50	6.00
................................................TAGCATCTACTAGGCTTTGTCA...............................................................................................	22	2	9.50	0.00	0.00	0.00	9.50
..............................................................................................ACATAGCCTATGAGAGGT.....................................................	18	2	9.50	0.50	6.00	3.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGA................................................	23	2	9.50	1.00	3.50	1.50	3.50
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	9.00	0.00	1.00	0.00	8.00
...............................................................................................CATAGCCTATGAGAGGTTAGG.................................................	21	2	8.50	2.00	4.00	1.50	1.00
..............................................................................................ACATAGCCTATAAGAGGTTAGG.................................................	22	2	7.50	0.00	0.50	3.00	4.00
................................................TAGCCGCTACTAGGCTTTGTCT...............................................................................................	22	2	7.00	0.00	0.50	3.00	3.50
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	7.00	0.50	2.50	2.50	1.50
..............................................................................................ACATAGCCTATGAGAGGTTAGA.................................................	22	2	6.50	1.00	0.00	3.00	2.50
...............................................CTAGCCTCTACTAGGCTTTGTCT...............................................................................................	23	2	6.50	0.50	0.50	0.50	5.00
..............................................................................................ACATAGCCTATGAGAGGTTCGG.................................................	22	2	6.00	0.50	0.50	2.50	2.50
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	6.00	1.50	0.50	0.50	3.50
......................................................................GTGCA--TTTGAT-ATAAGATCAG.......................................................................	21	2	6.00	1.50	0.00	0.50	4.00
.............................................................................................GACATAGCCTATGAGAGGTT....................................................	20	2	5.50	4.00	0.50	1.00	0.00
................................................TAGCCTCTACTGGGCTTTGTCT...............................................................................................	22	2	5.50	0.50	1.00	0.50	3.50
................................................TAGCCTCTACTATGCTTTGTCT...............................................................................................	22	2	5.50	0.00	1.00	3.00	1.50
................................................TAGCCTCTACTAGGCTTTGTAT...............................................................................................	22	2	5.00	0.00	0.00	0.00	5.00
..............................................................................................ACATAGCCTATGTGAGGTTAGG.................................................	22	2	4.50	0.00	2.50	2.00	0.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGC................................................	23	2	4.50	2.50	1.00	1.00	0.00
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.00	0.00	4.50
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	4.50	1.50	1.00	0.00	2.00
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	4.50	1.00	1.00	0.50	2.00
..............................................................................................ACATAGCCTATGAGGGGTTAGG.................................................	22	2	4.50	0.50	1.00	1.50	1.50
................................................TAGCCTCTACTAGGCTTTATCA...............................................................................................	22	2	4.50	0.50	0.00	0.00	4.00
..............................................................................................ACATAGCCTATGAGAGGTTACG.................................................	22	2	4.50	0.50	1.50	0.50	2.00
................................................TAGCCTCTACTAGGCGTTGTCT...............................................................................................	22	2	4.50	0.50	1.50	0.00	2.50
................................................TAGCCTCTACTTGGCTTTGTCT...............................................................................................	22	2	4.50	0.00	0.50	1.00	3.00
................................................TAGCCTCTACTAGGCTTTGTCAA..............................................................................................	23	2	4.50	0.00	0.50	0.00	4.00
................................................CAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.00	0.00	0.00	1.00	3.00
..............................................................................................ACATAGCCTATGAGAGGTTAGC.................................................	22	2	4.00	2.00	2.00	0.00	0.00
...............................................CTAGCCTCTACTAGGCTTTGTCA...............................................................................................	23	2	4.00	0.00	0.00	0.00	4.00
..............................................................................................ACATAGCCTATGAGAGGCTAGG.................................................	22	2	4.00	0.00	1.50	0.00	2.50
................................................TAGCCTCTACGAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	1.00	1.00	1.50
................................................TAGCCTCTACTAGGCTTTGTTT...............................................................................................	22	2	3.50	0.00	0.50	1.00	2.00
................................................TAGCCTCTACTAGGCTTTTTCA...............................................................................................	22	2	3.50	0.00	0.00	0.00	3.50
................................................TGGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	0.00	0.50	1.50	1.50
....................................................CTCTACTAGGCTTTGTCT...............................................................................................	18	2	3.50	0.00	0.00	0.00	3.50
................................................TAGCCTCTACTAGGCTTTGTCTT..............................................................................................	23	2	3.50	0.50	0.50	2.00	0.50
..............................................................................................ACATAGCCTATGCGAGGTTAGG.................................................	22	2	3.50	0.00	0.50	2.00	1.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGTT...............................................	24	2	3.50	1.50	1.50	0.50	0.00
....................................................CTCTACTAGGCTTTGTCA...............................................................................................	18	2	3.50	0.00	0.00	0.00	3.50
.................................................AGCCTCTACTAGGCTTTGTCTG..............................................................................................	22	2	3.50	0.50	1.50	1.00	0.50
.................................................AGCCTCTACTAGGCTTTGTCT...............................................................................................	21	2	3.50	0.00	0.00	0.00	3.50
..............................................................................................ACATAGCCTATGAGAGGGTAGG.................................................	22	2	3.50	0.00	1.50	0.50	1.50
................................................TAGCCTCTACTAGGCTTTCTCT...............................................................................................	22	2	3.00	0.50	2.50	0.00	0.00
................................................TAGCCTCTACTAGTCTTTGTCT...............................................................................................	22	2	3.00	1.00	1.00	0.50	0.50
................................................TAGCCTCTACTAGGATTTGTCA...............................................................................................	22	2	3.00	0.00	0.00	0.00	3.00
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	3.00	0.00	1.00	0.00	2.00
................................................TAGCCTCTACTCGGCTTTGTCC...............................................................................................	22	2	3.00	0.00	0.00	0.00	3.00
................................................TAGCCTCTACTAGGCTTTGCCA...............................................................................................	22	2	3.00	0.00	0.00	0.00	3.00
..............................................................................................ACATAGACTATGAGAGGTTAGG.................................................	22	2	3.00	0.00	0.50	0.00	2.50
..............................................................................................ACATAGCCTATGAGAGGTTAGGTC...............................................	24	2	3.00	1.50	1.00	0.50	0.00
..............................................................................................ACATAGCCTCTGAGAGGTTAGG.................................................	22	2	3.00	0.00	1.00	1.50	0.50
..................................................GCCTCTACTAGGCTTTGTCA...............................................................................................	20	2	3.00	0.00	0.00	0.00	3.00
................................................TAGCCTCTACTAGGCTTTGTCTCC.............................................................................................	24	2	3.00	2.50	0.50	0.00	0.00
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	3.00	0.00	0.50	1.00	1.50
................................................TAGCCTCTACTAGGCTTTGTTA...............................................................................................	22	2	3.00	0.50	0.00	0.00	2.50
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	3.00	0.00	0.00	0.00	3.00
................................................TAGCCTCTGCTAGGCTTTGTCA...............................................................................................	22	2	3.00	0.00	0.00	0.00	3.00
.............................................................................................GACATAGCCTATGAGAGGTTA...................................................	21	2	3.00	0.00	0.00	0.50	2.50
.............................................................................................GACATAGCCTATGAGAGGTTAGGT................................................	24	2	2.50	1.00	0.00	0.00	1.50
..............................................................................................ACATAGCATATGAGAGGTTAGG.................................................	22	2	2.50	1.00	0.50	0.00	1.00
................................................TAGCCTCTACTAGGCTTCGTCA...............................................................................................	22	2	2.50	0.00	0.00	0.00	2.50
..............................................................................................ACATAGCCTATGAGTGGTTAGG.................................................	22	2	2.50	0.00	1.00	0.50	1.00
................................................TAGCCTCTACTAGGCTTTGGCT...............................................................................................	22	2	2.50	0.00	0.00	0.50	2.00
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	2.50	0.00	0.50	1.00	1.00
..............................................................................................ACATAGCCTATGAGAGGTTAAG.................................................	22	2	2.50	0.00	0.00	1.00	1.50
................................................TAACCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	0.00	0.50	2.00
................................................TAGCCTCTACTAGGCTTTGTCTCT.............................................................................................	24	2	2.50	1.50	0.00	0.00	1.00
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	2.50	0.00	0.50	1.00	1.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	2.50	1.00	0.50	0.00	1.00
..............................................................................................ACATAGCCTATGGGAGGTTAGG.................................................	22	2	2.50	0.00	1.50	0.50	0.50
..............................................................................................ACATAGCCTATGAGAGGTTGGG.................................................	22	2	2.50	0.00	1.00	1.50	0.00
..............................................................................................ACAGAGCCTATGAGAGGTTAGG.................................................	22	2	2.50	0.00	2.00	0.00	0.50
................................................TAGCCTCTATTAGGCTTTGTCT...............................................................................................	22	2	2.50	0.00	0.50	0.00	2.00
................................................TAGCCTCTACTAAGCTTTGTCT...............................................................................................	22	2	2.50	0.00	0.50	1.00	1.00
................................................TAGCCTCTACTAGGCCTTGTCA...............................................................................................	22	2	2.00	0.50	0.00	0.00	1.50
..........................................................................................TCAGACATAGCCTATGAGAGGT.....................................................	22	2	2.00	1.50	0.00	0.00	0.50
................................................TAGCCCCTACTAGGCTTTGTCA...............................................................................................	22	2	2.00	0.00	0.00	0.00	2.00

droGri2

TCT------------CAAA----------TG-GAATTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCACTTTTTCA-ATTCAATCAGACATAGCCTATGAGAGGTTAGGTGTACAAATGGATCAAAGCAACAAGGCTGCTGTCGGGGACTAAAAATGA	Size	Hit Count	Total Norm	V109 Male body
................................................TAGCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	1741.00	1741.00
..............................................................................................ACATAGCCTATGAGAGGTTAGG.................................................	22	2	238.50	238.50
................................................TAGCCTCTACTAGGCTTTGTC................................................................................................	21	2	198.00	198.00
................................................TAGCCTCTACTAGGCTTTGT.................................................................................................	20	2	135.00	135.00
..............................................................................................ACATAGCCTATGAGAGGTTAG..................................................	21	2	110.00	110.00
..............................................................................................ACATAGCCTATGAGAGGTT....................................................	19	2	31.00	31.00
................................................TAGCCTCTACTAGGCTTCGTCT...............................................................................................	22	2	20.50	20.50
................................................TAGCCTCTACTAGGCTTAGTCT...............................................................................................	22	2	16.00	16.00
..............................................................................................ACATAGCCTATGAGAGGTTAGGT................................................	23	2	13.50	13.50
................................................TAGCCTCTACTAGGCTTGGTCT...............................................................................................	22	2	11.50	11.50
................................................TAGCCTATACTAGGCTTTGTCT...............................................................................................	22	2	10.00	10.00
..............................................................................................ACATAGCCTATGAGAGGTTA...................................................	20	2	9.50	9.50
..............................................................................................ACATAGCCTATGAGAGGTTAGT.................................................	22	2	7.50	7.50
................................................TAGCCTCTACTAGGCTTTGTCA...............................................................................................	22	2	7.50	7.50
................................................TAACCTCTACTAGGCTTTGTCT...............................................................................................	22	2	6.00	6.00
................................................TAGCCTCTCCTAGGCTTTGTCT...............................................................................................	22	2	5.50	5.50
................................................TACCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	4.50	4.50
.............................................................................................GACATAGCCTATGAGAGGTTAGG.................................................	23	2	4.00	4.00
................................................TAGCCTCTTCTAGGCTTTGTCT...............................................................................................	22	2	4.00	4.00
................................................TAGCCTCTACTAGGCCTTGTCT...............................................................................................	22	2	3.50	3.50
................................................TAGCCCCTACTAGGCTTTGTCT...............................................................................................	22	2	3.50	3.50
................................................TAGCCTCTACTAGGCTTTGTCG...............................................................................................	22	2	3.50	3.50
..............................................................................................ACATAGCCTATGAGAGGGTAGG.................................................	22	2	3.00	3.00
..............................................................................................ACATAGCCTATGAGAGGCTAGG.................................................	22	2	3.00	3.00
................................................TAGCCTCTACCAGGCTTTGTCT...............................................................................................	22	2	2.50	2.50
................................................TAGCCACTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	2.50
................................................TATCCTCTACTAGGCTTTGTCT...............................................................................................	22	2	2.50	2.50
................................................TAGCCTCTACTAGGCTTTGCCT...............................................................................................	22	2	2.50	2.50
.............................................................................................GACATAGCCTATGAGAGGTTAG..................................................	22	2	2.50	2.50
................................................TAGCCTCCACTAGGCTTTGTCT...............................................................................................	22	2	2.50	2.50
................................................TAGCCTCTACTAGGCTCTGTCT...............................................................................................	22	2	2.00	2.00
................................................TAGCCTCTACTCGGCTTTGTCT...............................................................................................	22	2	2.00	2.00
................................................TAGCCTCTACTAGGTTTTGTCT...............................................................................................	22	2	2.00	2.00
................................................TAGCCTCTGCTAGGCTTTGTCT...............................................................................................	22	2	2.00	2.00
................................................TAGCCTTTACTAGGCTTTGTCT...............................................................................................	22	2	2.00	2.00
................................................TAGCCTCTACTAGGCTTTGTCTG..............................................................................................	23	2	2.00	2.00
..............................................................................................ACATAGCCTATGAGAGGCTAG..................................................	21	2	2.00	2.00
................................................TAGCCTCTACTAGGATTTGTCT...............................................................................................	22	2	2.00	2.00
..............................................................................................ACATAGCCTATGAGAGGGTAG..................................................	21	2	1.50	1.50
................................................TAGCCTCTACTAGGCxTTGTCT...............................................................................................	21	2	1.50	1.50
................................................TAGCCTCTACTAGGCTTAGT.................................................................................................	20	2	1.50	1.50
................................................TAGCGTCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	1.50
................................................TAGCCTCTACTAGGCTTTGTCC...............................................................................................	22	2	1.50	1.50
................................................TAGCCTCTAATAGGCTTTGT.................................................................................................	20	2	1.50	1.50
..............................................................................................ACATAGCCTATGAGAGGAT....................................................	19	2	1.50	1.50
................................................TAGCCTCTAATAGGCTTTGTCT...............................................................................................	22	2	1.50	1.50
................................................TAGCCTCTACTAGGCTTGGT.................................................................................................	20	2	1.50	1.50
..............................................................................................ACATAGCCCATGAGAGGTTAG..................................................	21	2	1.50	1.50
................................................TAGCCTCTACTACGCTTTGTCT...............................................................................................	22	2	1.50	1.50
................................................TAGCCTCTACTAGGCTTTTTCT...............................................................................................	22	2	1.50	1.50
................................................TAGCCTCTACTAGCCTTTGTCT...............................................................................................	22	2	1.50	1.50
................................................TAGCCTCTACTAGGCTTAGTC................................................................................................	21	2	1.50	1.50
................................................TAGCATCTACTAGGCTTTGTCT...............................................................................................	22	2	1.50	1.50
................................................TAGCCTATACTAGGCTTTGTC................................................................................................	21	2	1.50	1.50

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image