Possible Orthologs for dme-mir-280

droSim1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
7	chrX:11649338-11649479 +	35.8	C------------TGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATA-------------TGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CGTAGGATGGGATGGAGGGGGGTTTGTCAACTCGAACGTGCCTCGCATGCCAATGGAATGCTTATCAAAGTATATAAAATTCATAGAAATTATGACGCGAGCGCAGAAAGTTGCAAGAAAAAGACGTTT--------GACGTTGACACAA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .....................CTTCGTCAACTCGAACGT............................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 ..................................................................................................................AAGAAAATGACxTTT--------GACGT........ 19 1 1.00 0.00 0.00 1.00 0.00
4	chr3R_random:642623-642715 +	33.0	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCG-CCTCGA CTGTCA-GTCCGTGCATGTGTTTGTGTGTGTGTGTTCTAT---------------------ACAGTTTTTTTTAT-----------TGCGCATCATGGTGTGCAATAGCGCGCGTTCTGACCTCTC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo ...............ATGTGTCTGTGTGTGAGT............................................................................................. 18 3 0.67 0.00 0.00 0.67 0.00 ..................TGTTTGTGTGTGTGGGTG.......................................................................................... 18 5 0.40 0.00 0.40 0.00 0.00 .............GCCTGTGTGTGTGTGTGTGT............................................................................................. 20 1 1.00 1.00 0.00 0.00 0.00 ................TGTGTGTGTGTGTGTGTGT........................................................................................... 19 34 0.03 0.03 0.00 0.00 0.00 ..................TGTGTGTGTGTGTGTGTG.......................................................................................... 18 40 0.03 0.03 0.00 0.00 0.00 ..................TTTTTGTGTGTGTGTGTTG......................................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 ................TGTGTGTGTGTGTGTGTGG........................................................................................... 19 19 0.05 0.05 0.00 0.00 0.00 ...................GTTTTTGTGTGTGTGTGC......................................................................................... 18 2 0.50 0.50 0.00 0.00 0.00 ................TGTCTGTGTGTGTGTGTGT........................................................................................... 19 14 0.07 0.07 0.00 0.00 0.00 ................TGTGTGTGTGTGTGTGTG............................................................................................ 18 40 0.03 0.03 0.00 0.00 0.00 .................GTTTTTGTGTGTGTGTGC........................................................................................... 18 2 0.50 0.50 0.00 0.00 0.00 ................TGTGTATCTGTGTGTGTG............................................................................................ 18 10 0.10 0.10 0.00 0.00 0.00 ............TGCGTGTGTCTGTGTGTGTG.............................................................................................. 20 2 0.50 0.50 0.00 0.00 0.00 ............TGCGTGTGTCTGTGTGTGTGT............................................................................................. 21 1 1.00 1.00 0.00 0.00 0.00 ..................TGTGTGTGTGTGTGTGGT.......................................................................................... 18 10 0.10 0.10 0.00 0.00 0.00 ............TGCGTGTGTCTGTGTGTGT............................................................................................... 19 3 0.33 0.33 0.00 0.00 0.00
6	chrX:7413174-7413216 +	17.87	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTC---CTCCACACTGCACTCGCCGCCTCGA AT-----------------------------------------------------------------------------------AGGAAAACGGAGGGTGTTACCCCTATTTCCCTTTC--CCCTTA Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo

droSec1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_1:1832273-1832397 +	96.83	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CTGACGTGTGTGTGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTGCACACTGCACTCGCCGCCTCGA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head
5	super_0:10334002-10334094 -	33.6	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCG-CCTCGA CTGTCA-GTCCGTGCATGTGTTTATGTGTGTGTGTTCTAT---------------------ACAGTTTTTTTTAT-----------TGCGCATCATGGTGTGCAATAGCGCGCGTTCTGACCTCTC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ................TGTGTGTGTGTGTGTGTG............................................................................................ 18 27 0.30 0.00 0.00 0.30 .................GTGTGTGTGTGTGTGTGT........................................................................................... 18 26 0.27 0.12 0.00 0.15 ................TGTGTGTGTGTGTGTGTGT........................................................................................... 19 19 0.21 0.11 0.00 0.11 ............................................................................................TCATGGxGTGCATTAGCGCGC............. 20 1 2.00 0.00 2.00 0.00 ................CGTGTTTGTGTGTGTGTGT........................................................................................... 19 2 0.50 0.50 0.00 0.00 ...................GTTTATGTATGTGTGTTGT........................................................................................ 19 1 1.00 0.00 1.00 0.00 .................GTGTATGTGTGTGTGTGTT.......................................................................................... 19 2 0.50 0.50 0.00 0.00 ......................TATGTGTGTGTGTGCGAT---------------------AC............................................................... 20 1 1.00 1.00 0.00 0.00 ................TGTGTTTATGTAAGTGTG............................................................................................ 18 1 1.00 0.00 1.00 0.00 ........................TGTGTGTGTGTACTAT---------------------ATAGT............................................................ 21 1 1.00 0.00 0.00 1.00 .............GCATGTGTTTATGTGTGTGTG............................................................................................ 21 1 1.00 0.00 0.00 1.00 ................TGTGTTTGTGTGTGTGTG............................................................................................ 18 4 0.25 0.00 0.00 0.25 ................TGTGTGTTTGTGTGTGTGT........................................................................................... 19 3 0.33 0.00 0.33 0.00 ...............ATATGTTTATGTATGTGTGTT.......................................................................................... 21 1 1.00 0.00 1.00 0.00 .................GTGTTTGTGCGTGTGTGTTC......................................................................................... 20 1 1.00 0.00 1.00 0.00 ..................TGTTAATATGTGTGTGTT.......................................................................................... 18 1 1.00 0.00 1.00 0.00 ...............ATGTGTGTGTGTGTGTGTGT........................................................................................... 20 4 0.25 0.00 0.25 0.00 ...............ATATGTTTATGTATGTGT............................................................................................. 18 4 0.25 0.00 0.25 0.00 .............TCATGTGTGTATGTGTGTG.............................................................................................. 19 1 1.00 1.00 0.00 0.00 .............GAATGTGTTTATGTGAGT............................................................................................... 18 1 1.00 0.00 0.00 1.00 ................TGTGTTTATGTGTGTGTGTTC......................................................................................... 21 1 1.00 1.00 0.00 0.00 ......................TATGTGTGTGTGTGCGAT---------------------A................................................................ 19 1 1.00 1.00 0.00 0.00 ...............ATGTGTTTGTGTGTGTGT............................................................................................. 18 1 1.00 0.00 1.00 0.00 .............GCATGTGTGTGTGTGTGTGTGT........................................................................................... 22 2 0.50 0.50 0.00 0.00 .................GTGTTTGTGTGTGTGTGA........................................................................................... 18 2 0.50 0.00 0.00 0.50 ..............CATGCGTGTATGTGTGTGTG............................................................................................ 20 1 1.00 0.00 0.00 1.00 .................GTGTGTATGTGTGTGTGTA.......................................................................................... 19 1 1.00 0.00 0.00 1.00 .................GTGTGTGTGTGTGTGTGTT.......................................................................................... 19 7 0.14 0.00 0.00 0.14 ..............CATGTGTGTGTGTGTGTG.............................................................................................. 18 8 0.13 0.00 0.13 0.00 .................ATGTTTATGTATGTGTGTT.......................................................................................... 19 1 1.00 1.00 0.00 0.00

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr2L:16840791-16840915 +	92.89	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CTGACGTGTGTGTGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAACTTGAGGTCCTGCACACTGCACTCTCCCGCTCGA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..................CTTAAATGTATTTACGTT......................................................................................... 18 2 0.50 0.00 0.50 0.00 0.00 0.00
3	chrX:1033605-1033617 +	7.32	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA C----------------------------------------------------------------------------------------------------------------CCGCCCTCTCGC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head	None	None

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_4929:18446687-18446817 -	86.07	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCC-------TCCACACTGCACTCGCCGCCTCGA CTGACGTGTGTGTGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCAGCACACTGCACACTGCACTTGCC-CCTCGA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .....GTGTGxATGCTGGCTTTTG............................................................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 .........GTGTGCTGGATGTTATGT......................................................................................................... 18 1 1.00 0.00 0.00 0.00 1.00 .........................................................TTATACAGATTATTTTAT......................................................... 18 1 1.00 1.00 0.00 0.00 0.00 .TGCCGTGxGTGTGCTGGCTTT.............................................................................................................. 20 1 1.00 1.00 0.00 0.00 0.00

droFic1 - 6 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000453215:11307-11444 -	70.53	CTGACGTGTGTAT--------------GCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGACGTGTGTTTGTGGCCGTGTGTGAGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTACATGCAGGCCGAGCTTTTGCTTGCTGCAACCGCC-CCTCGA Size Hit Count Total Norm
2	scf7180000454055:908058-908179 +	44.94	CTGACGTGTG-----------TATGCTGGC---------------------TTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGA--GGTCCTCCACACTGCACTCGCCGCCTCGA CTGCCGAATACATAAGATGCGGATGCGGACGGACCAAGGATACGAGAAAAAGTGCATGTGTCTGCGTTA-------------------------------------TTTGCATGTGGCTCGCACTCGACTGATTCTCGGACCAGGATACGAAAACTCAA Size Hit Count Total Norm
4	scf7180000453782:391056-391125 -	26.83	-----CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA---------- AGTTTTTGTTATGTGTG-------------------------------------------------------------------AAATTTGTGCTGGCCGCAATTTTCCCTTTTGC---TGGCGCCTTGCAAAGTCCTTT Size Hit Count Total Norm
5	scf7180000453824:500730-500762 -	15.45	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACA-CTGCACTCGCCGCCTCGA TCGA---------------------------------------------------------------------------------------------GTGCTCCACTTCCGCCCTCTCCTCCTCTT Size Hit Count Total Norm
6	scf7180000453829:460086-460113 -	11.07	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA C----------------------------------------------------------------------------------------AAATAAAAGTCCCCCAATTTGCAGTTG--------- Size Hit Count Total Norm
8	scf7180000454113:2022041-2022059 -	8.09	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA A---------------------------------------------------------------------------------------------------CTCCGCAGTATCCTTTTC------- Size Hit Count Total Norm

droEug1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409275:13517-13673 -	58.38	CTGACGTGTGTATG--------------------------------CTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATATGTGTGTGCCTGTGTTTGTGTAGATATGTGTGTGTGTGAACTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCGCACTGCAATCGCCTCCTCAA Size Hit Count Total Norm
1	scf7180000409548:778523-778664 +	44.22	CTGACGTGTGTATGCTGGCTTTTATGTAT--TTACGTTGCATATGAAATGATATTTAT----AGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACT------------CGCCGCCTCGA TTTTCTCAATTAT-TTGATTTTTAGGTACTTTTATGTTAAAAAAAAAATATATATTAAATTAGATAAAAATAATAACTTGTGTGAATATGTTTCTTAATTGGACTGTTCTTGGCTTCACAATTTTTAATATATTCGCATTCGA Size Hit Count Total Norm

droBia1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000302291:2050742-2050880 +	71.94	CTGA--------------CGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATGTGAGTTCGAGCTCGTGTGCGAGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTGCTCGCTGCATCCGACCCCTGGA Size Hit Count Total Norm
1	scf7180000302126:2911067-2911128 +	29.27	CTG-------ACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCAC--TCGCCGCCTCGA TTTCAATTGCACGTG------------------------------------------------------------------------CCGAAATGCAGGTGGATGTCTGTCAGGTGGCATTTCCGTTGCCACGC Size Hit Count Total Norm
4	scf7180000302126:3649157-3649179 -	8.94	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CA-ATTCGTTTGCCTTTGCTTTTT----------------------------------------------------------------------------------------------------- Size Hit Count Total Norm		None

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000415627:54525-54663 +	74.48	CTGACGTGTGTAT--------------GCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATGTGTGTTTGAGCTCTTGTGTGAGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTGCACACTGCAATCGTCCCCTGGA Size Hit Count Total Norm

droEle1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000491240:998892-999030 +	73.21	CTGACGTGTG--------------TATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATGTGTGTTTGTGCTCGTGTGTGAGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTGCATACTGCAATATCCCCCTGGA Size Hit Count Total Norm
1	scf7180000491023:712797-712916 +	33.69	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAG------------------------------------TCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CCAAAGCCCCAAACCCAATGCCCAAACAC------------------------------------ACCA-----TTTCTCCCCCCTGGCAAGACAAATTTTTAGTGCTGCCGTCAAAGTAATGACTTTTTAACGTCTCGCATGCGCGATCCCCTGTCTAGT Size Hit Count Total Norm
7	scf7180000491249:1225472-1225624 -	32.26	CTGACGTGTGTATGCTG--GCTTTT----------------------------------------AT--------------GTATTTACGT-TGCATATGA-------AATGATATTTATAGTAAACAGAT--TATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTG-CATGTGTACGTTGCGGTGTTCGGCCATTTTGTGAATGCATTTATCTCACACACACACACACATGTATCTATATCGCTGTATCTGTGTTTGTATATCATTACTTATCAGATACTTATTATGAGCACACGATATCGTATATTTTGGCATGC-------------------------------------- Size Hit Count Total Norm
10	scf7180000491273:1278202-1278225 -	11.38	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA T-----------------------------------------------------------------------------------------------------CTCCATTGCTGTCTCTCCCCGGA Size Hit Count Total Norm		None

droRho1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000770177:298029-298165 +	73.63	CTGACGTGTGTAT--------------GCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATGTGTGTTTGTGCCAGTGTGTGAGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAA-TCGAGGTCCTGTACACTGCAGCCGTC-CCTGGA Size Hit Count Total Norm
3	scf7180000779151:10125-10275 +	39.1	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGT------------------------------------------TGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTAT--ATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA -TGACAGGAATTTTGTTGATTTTCCGTATTTATTTAAATGCTAGCCAACGAATTTCTGCTTAAATTCAGATACAATTTCAATATTAAA------------------TTTCGGTTTATTTGCTTGTACAAATTGGATTCCATCTCTTCAGGATGGCACGCAGCAAATGAA Size Hit Count Total Norm

droKik1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302277:32197-32350 +	48.49	CTGACGTGTGTA-------------------------------------------TGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATGTGTGTGCGTGTGAGTGTGCTGGTGTTTGTGTTTGTGCTCGTGTGTGAGCTGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTACATGCA--------------GCACTGCAATCGGCTCCTTGA Size Hit Count Total Norm
5	scf7180000302586:173465-173593 -	40.11	CTGACGT----GTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTAT----------------ATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA GTGCTGTTGTTGTGTGTTGTGACTTTCACG-------GCTGAAGTTCCCATGGTTTTTGTCATA------TTCTCTTGGACATAACTCTTCGATCCGATCCAATAATGCCAATAGTGCTCACTTCAACTGTGCTAGCTTTTT--- Size Hit Count Total Norm
3	scf7180000302408:315169-315216 +	18.7	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCC-------GCCTCGA TGT------------------------------------------------------------------------------------GCTAAGCCACGCACGTCCTGCCGCACTCCTCGTCCTTTCCCCTGA Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13266:1806990-1807233 -	20.87	CTGACGT--GTGTAT-----------------------------------------------------------------------------------------------------------------GCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAG------------TCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGAAATGTGTGTATGTGGGTGGGTGGGTGTGTGTGCACTTTCTGCCATCCAGACTGCCAGCCAGCCATCTAGCCAGCCTGCCTGACTGCTTTCCTTGCCACTTGTGTGTATGTGTGTGTGTGTATGAGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGCCTGAACAACTTTGGA--------ACACTGCAATCGCCTTCTGGA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ...............GTGGGTGGTTGGGTGGGT........................................................................................................................................................................................................................... 18 1 3099.00 142.00 2940.00 17.00 0.00 ...............GTGGGTGGATGGGTGGGT........................................................................................................................................................................................................................... 18 1 658.00 14.00 639.00 5.00 0.00 ...............GTGGGTGGGTGGTTGGGT........................................................................................................................................................................................................................... 18 1 374.00 8.00 364.00 2.00 0.00 ...............GTGGGTGGGTGGATGGGT........................................................................................................................................................................................................................... 18 1 162.00 4.00 158.00 0.00 0.00 ...............GTGGGTGGGTGGGTGGTT........................................................................................................................................................................................................................... 18 1 136.00 8.00 128.00 0.00 0.00 ...............GTGGGTGGGTGGTTGGGTG.......................................................................................................................................................................................................................... 19 1 72.00 5.00 67.00 0.00 0.00 ...................GTGGGTGGGTGGGTGTCC....................................................................................................................................................................................................................... 18 3 23.00 0.33 22.67 0.00 0.00 ...............GTGGGTGGGTGGGTGTCC........................................................................................................................................................................................................................... 18 3 23.00 0.33 22.67 0.00 0.00 ...............GTGGGTGGATGGGTGGGTGT......................................................................................................................................................................................................................... 20 1 56.00 5.00 50.00 1.00 0.00 ...............GTGGGTGGGTGGGTGGCT........................................................................................................................................................................................................................... 18 1 45.00 0.00 45.00 0.00 0.00 ...............GTGGGTCGGTGGGTGGGT........................................................................................................................................................................................................................... 18 1 45.00 1.00 44.00 0.00 0.00 ...................GTGGGTGGGTGTGTGGCC....................................................................................................................................................................................................................... 18 1 39.00 0.00 39.00 0.00 0.00 ...............GTGGGTGGGTCGGTGGGT........................................................................................................................................................................................................................... 18 1 27.00 0.00 27.00 0.00 0.00 ...............GTGGGTGGATGGGTGGGTG.......................................................................................................................................................................................................................... 19 1 26.00 1.00 25.00 0.00 0.00 ...................GTGGGTGGGTGxGTGGGCA...................................................................................................................................................................................................................... 18 1 25.00 0.00 25.00 0.00 0.00 ...........GTGTGTGGTTGGGTGGGT............................................................................................................................................................................................................................... 18 1 20.00 0.00 20.00 0.00 0.00 ................TGGGTGGGTGGGTGGTTG.......................................................................................................................................................................................................................... 18 1 19.00 0.00 19.00 0.00 0.00 ...............GTGGGTGGGTGGATGGGTG.......................................................................................................................................................................................................................... 19 1 15.00 0.00 14.00 1.00 0.00 ...............GTGGGTGGGTxGGTGGGTG.......................................................................................................................................................................................................................... 18 5 3.00 0.00 3.00 0.00 0.00 ...............GTGGGTGGGTGGCTGGGT........................................................................................................................................................................................................................... 18 1 13.00 0.00 13.00 0.00 0.00 ..............TGxGGGTGGGTGGGTGTGTGG......................................................................................................................................................................................................................... 20 1 13.00 0.00 12.00 1.00 0.00 ...............GTGGGTGGTTGGGTGGGTGT......................................................................................................................................................................................................................... 20 1 12.00 0.00 12.00 0.00 0.00 ................TGGGTGGGTGGTTGGGTG.......................................................................................................................................................................................................................... 18 1 12.00 1.00 11.00 0.00 0.00 ................TGGGTGGATGGGTGGGTG.......................................................................................................................................................................................................................... 18 1 12.00 0.00 12.00 0.00 0.00 ................TGGGTGGGTGGGTGTTGGT......................................................................................................................................................................................................................... 19 1 11.00 0.00 11.00 0.00 0.00 ...............GTGGGTGGTTGGGTGTGT........................................................................................................................................................................................................................... 18 1 11.00 1.00 10.00 0.00 0.00 .........................................................................................................AGTGTGTGTGTGTGTGTG................................................................................................................................. 18 27 0.41 0.04 0.37 0.00 0.00 .......................................................................................................AGTGTGTGTGTGTGTGTG................................................................................................................................... 18 27 0.41 0.04 0.37 0.00 0.00 ........................................................................................................GTGTGTGTGTGTGTGTGT.................................................................................................................................. 18 20 0.50 0.00 0.50 0.00 0.00 ..........................................................................................................GTGTGTGTGTGTGTGTGT................................................................................................................................ 18 20 0.50 0.00 0.50 0.00 0.00 ...............GTGGGTGGGTGGGTTGGT........................................................................................................................................................................................................................... 18 1 9.00 1.00 8.00 0.00 0.00 ...............GTGGGTGGTTGGGTGGG............................................................................................................................................................................................................................ 17 1 8.00 0.00 0.00 8.00 0.00 .......................................................................................................AGTGTGTGTGTGTGTGTGT.................................................................................................................................. 19 22 0.36 0.00 0.36 0.00 0.00 ...............GTGGGTGGGTGGTTGxGTGTGCA...................................................................................................................................................................................................................... 22 1 8.00 0.00 8.00 0.00 0.00 .........................................................................................................AGTGTGTGTGTGTGTGTGT................................................................................................................................ 19 22 0.36 0.00 0.36 0.00 0.00 ...........GTGTGTGGATGGGTGGGT............................................................................................................................................................................................................................... 18 1 7.00 1.00 6.00 0.00 0.00 ...............GTGGATGGGTGGGTGGGT........................................................................................................................................................................................................................... 18 1 7.00 0.00 7.00 0.00 0.00 .........................................................................................................TGTGTGTGTGTGTGTGTG................................................................................................................................. 18 23 0.30 0.00 0.30 0.00 0.00 .......................................................................................................TGTGTGTGTGTGTGTGTG................................................................................................................................... 18 23 0.30 0.00 0.30 0.00 0.00 ...............GTGGGTGGATGGGTGGG............................................................................................................................................................................................................................ 17 1 6.00 0.00 0.00 6.00 0.00 .......................................................................................................TGTGTGTGTGTGTGTGTGT.................................................................................................................................. 19 19 0.32 0.00 0.32 0.00 0.00 ...............GTGGGTGGGTGGCTGTGG........................................................................................................................................................................................................................... 18 1 6.00 0.00 6.00 0.00 0.00 ................TGGGTGGTTGGGTGGGTG.......................................................................................................................................................................................................................... 18 1 6.00 0.00 6.00 0.00 0.00 ...............GTGGGTGAGTGGGTGGGTG.......................................................................................................................................................................................................................... 19 1 6.00 0.00 6.00 0.00 0.00 .........................................................................................................TGTGTGTGTGTGTGTGTGT................................................................................................................................ 19 19 0.32 0.00 0.32 0.00 0.00 ...............GTGGTTGGGTGGGTGGGT........................................................................................................................................................................................................................... 18 1 6.00 0.00 6.00 0.00 0.00 ...............GTGGGTGGGTGGGTGTCG........................................................................................................................................................................................................................... 18 1 6.00 0.00 6.00 0.00 0.00 ................TGGGTGGGTGGGTGTTGG.......................................................................................................................................................................................................................... 18 1 5.00 0.00 5.00 0.00 0.00 ...............GTGGGTGGGTxGGTGGGT........................................................................................................................................................................................................................... 17 3 1.67 0.00 0.00 1.67 0.00 ...............GAGGGTGGGTxGGTGTGTGTG........................................................................................................................................................................................................................ 20 2 2.50 1.50 1.00 0.00 0.00 .......................................................................................................TGTGTGTGTGTGTGTGTGTG................................................................................................................................. 20 15 0.33 0.00 0.33 0.00 0.00 ...............GTGGGTGAGTGGGTGGGT........................................................................................................................................................................................................................... 18 1 5.00 0.00 5.00 0.00 0.00 .........GTGGATGTGGATGGGTGGGT............................................................................................................................................................................................................................... 20 1 5.00 0.00 4.00 1.00 0.00 ..........TGTGTGTGGGTGGGTGGGC............................................................................................................................................................................................................................... 19 1 5.00 0.00 5.00 0.00 0.00 ...............GTGGGTGGGTGGTGGTGTG.......................................................................................................................................................................................................................... 19 1 5.00 0.00 5.00 0.00 0.00 ................TGGGTCGGTGGGTGGGTG.......................................................................................................................................................................................................................... 18 1 5.00 0.00 5.00 0.00 0.00 ..............TGTGGGTGGGTGGGTGTCC........................................................................................................................................................................................................................... 19 1 4.00 0.00 4.00 0.00 0.00 ...................GTGGGTGGGTGTGTGGGT....................................................................................................................................................................................................................... 18 2 2.00 0.00 2.00 0.00 0.00 ...................GTGGGTGGGTGTGTGTCC....................................................................................................................................................................................................................... 18 1 4.00 0.00 4.00 0.00 0.00 ................GGGGTGGGTGGGTGTGTGG......................................................................................................................................................................................................................... 19 1 4.00 0.00 4.00 0.00 0.00 ...............GTGGGTGGGTGTGTGGGT........................................................................................................................................................................................................................... 18 2 2.00 0.00 2.00 0.00 0.00 ...........GTTGGTGGGTGGGTGGGT............................................................................................................................................................................................................................... 18 2 2.00 0.00 2.00 0.00 0.00 ...............GTGGGTGGCTGGGTGGGT........................................................................................................................................................................................................................... 18 1 4.00 0.00 3.00 1.00 0.00 ...............GTGGGTGGTTGGGTGAGT........................................................................................................................................................................................................................... 18 1 4.00 1.00 3.00 0.00 0.00 ...............GTTGGTGGGTGGGTGGGT........................................................................................................................................................................................................................... 18 2 2.00 0.00 2.00 0.00 0.00 ...............GTGGGTGTGTGGGTGTGGGT......................................................................................................................................................................................................................... 20 2 1.50 0.00 1.50 0.00 0.00 ........TGTGTGTGTGTGTGGGTG.................................................................................................................................................................................................................................. 18 32 0.09 0.00 0.09 0.00 0.00 ...............ATGGGTGGGTGGGTGTGA........................................................................................................................................................................................................................... 18 1 3.00 0.00 3.00 0.00 0.00 ...............GTGGGTCGGTGGGTGGGTG.......................................................................................................................................................................................................................... 19 1 3.00 0.00 3.00 0.00 0.00 .........................................................................................................GGTGTGTGTGTGTGTGTGT................................................................................................................................ 19 21 0.14 0.05 0.10 0.00 0.00 ...........GTGTGTGGGTGGTTGGGT............................................................................................................................................................................................................................... 18 2 1.50 0.00 1.50 0.00 0.00 .......................................................................................................GGTGTGTGTGTGTGTGTGT.................................................................................................................................. 19 21 0.14 0.05 0.10 0.00 0.00 ...............GTGGGTGTGTGGGTGTGT........................................................................................................................................................................................................................... 18 7 0.43 0.14 0.29 0.00 0.00 ...............GTGGCTGGGTGGGTGGGT........................................................................................................................................................................................................................... 18 1 3.00 0.00 3.00 0.00 0.00 .........................................................................................................TGTGTGTGTGTGTGGGTG................................................................................................................................. 18 32 0.09 0.00 0.09 0.00 0.00 .......................................................................................................TGTGTGTGTGTGTGGGTG................................................................................................................................... 18 32 0.09 0.00 0.09 0.00 0.00 .......................................................................................................TGTGTGTGTGTGTGTGTGTGT................................................................................................................................ 21 10 0.30 0.00 0.20 0.10 0.00 ................TTGGTGGGTGGGTGGGTG.......................................................................................................................................................................................................................... 18 2 1.50 0.00 1.50 0.00 0.00 ................TGGGTGGATGGGTGGGTGT......................................................................................................................................................................................................................... 19 1 3.00 0.00 3.00 0.00 0.00 ................TGGGTGGATGGGTGGGT........................................................................................................................................................................................................................... 17 1 3.00 0.00 0.00 3.00 0.00 ............TTGGTGGGTGGGTGGGTG.............................................................................................................................................................................................................................. 18 2 1.50 0.00 1.50 0.00 0.00 ..............TGTGGGTGGGTGGGTGGC............................................................................................................................................................................................................................ 18 1 3.00 0.00 3.00 0.00 0.00 ...............GTGGGTGGGTGGGTGTATGG......................................................................................................................................................................................................................... 20 1 3.00 1.00 2.00 0.00 0.00 ................TGGTTGGGTGGGTGGGTG.......................................................................................................................................................................................................................... 18 1 3.00 0.00 3.00 0.00 0.00 ........................................................................................................GTGTGTGTGTGTGTGTGTGT................................................................................................................................ 20 10 0.30 0.00 0.30 0.00 0.00

droBip1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396006:13808-13931 +	52.6	CTGACGTGTGTATGCT-GGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAG-TCGAGGTCCTCCACACTGCACT-----CGCCGCCTCGA TTAAAGTTTAGGTTTTCGATTTAAATGTGTTTCAATTATATTTTAGAC---TTTAATAAATCATATATTATTTTATGAG---CTATATAAAAAATAAATG--TCCCACAGTGCCTTGCAGCTGAGTTGCCGT Size Hit Count Total Norm
3	scf7180000396730:2797214-2797452 -	21.75	CTGACGTGTGTAT--------------------------------------------------------------------------------------------------------------GCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAG------------TCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATATGTGTGTGGGTGTAGCTGGGAATGTGTGCACTTTCTGCCATCCAGACTTCCAGCCAGCTAGCCAGCCAGCCTGCCTGCCATCTAGCCTTCCTGCCTGTGTGTGTGTGTGTGTATGGAGATGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGCCTGAACAACTTTGGA--------ACACTGCAATCGCTTTCTGGA Size Hit Count Total Norm
2	scf7180000394769:12526-12530 -	2.44	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CTCTT------------------------------------------------------------------------------------------------------------------------ Size Hit Count Total Norm	None	None

dp4 - 14 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	chr2:30061606-30061728 +	48.82	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CTGCCGTTTGCATGCATT-AAATATTAATCTGTGCTGCC-GTGCAATTTCTGCTCTCGGAAATTAGTTACAGAAATTATAATTAAATTCCATTTTTGGTAGGATGCACCTCCCCCTCCCCCCTGC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body
10	chrXR_group8:5275319-5275439 +	46.21	CTGACGTGT--GTATGCTGGCTTTTATGTATTTACGTTGCATATG-AAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTC----GA TGTGCTGGTATTTATTTTGTCTGCC------TTGGTGTGCATAACAATGCAATGGCTGCAATAAATAAATAAGCA-AAACGTGA--ATGTG-AATTCAATGCC--TGGCGCTGCCCCCTCTTTCTCTCTATA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ........TATTTATTTCGTTTGCC------TT................................................................................................... 19 1 1.00 0.00 1.00 0.00 0.00 ..TTCTGGTATTTATTTTGTCTA............................................................................................................. 21 1 1.00 1.00 0.00 0.00 0.00
8	chrXR_group6:1133326-1133451 +	45.51	CTGACGTGTGTATGCTGGCTTTTATGTAT----TTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAG-------------TCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CTCTGCC-TCTGCTGTGGCTCTCTGCCTTTTTTTTTCG-TGCTTTTGTTTTGAG-----TTTCGAGCAGATT---------CGAGCTTCGCTTTGGTCGTTTTCTTCTTTTGTTGCCGTTGGGGCCGCCGCCGCCGCCGCCA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body
9	chrXR_group6:11946352-11946468 +	38.95	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATT----------------------------TATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TGTTCTGGGATATTTT------GAATTATTTTCCGGGTGGGGGAGGGGGGAGGGAGGGATTCGTCGTTGGATGGAGTTTTGGGGATTAAACA--------------------------TTTCG----GTGCCACACT-CTCTGGCCTCTGCGG Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ...................................GGGGGGGGAGAGGGGAGGG................................................................................................... 19 1 2.00 2.00 0.00 0.00 0.00 ...................................AGGGGGGGAGGGGGGAGGG................................................................................................... 19 1 2.00 2.00 0.00 0.00 0.00 ......................................GGGGGAGGGGGGCTGGAGGG............................................................................................... 20 1 2.00 1.00 0.00 1.00 0.00 .......................................TGGGAGGGGGGAGGGGGG................................................................................................ 18 1 1.00 1.00 0.00 0.00 0.00 ......................................GGGGGTGGGGGGAGGGGG................................................................................................. 18 1 1.00 1.00 0.00 0.00 0.00 ......................................AGGGGAGGGGGGAAGGAGGG............................................................................................... 20 1 1.00 1.00 0.00 0.00 0.00 ..................................GAGGGGGGGAGGGGGGAG..................................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 ....................................ATGGGGGAGGAGGGAGGG................................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 ......................................AGGGGAGGGGGGAxGGAGGGA.............................................................................................. 20 1 1.00 1.00 0.00 0.00 0.00 .................................GGGGAGGGGGAGGGGGGA...................................................................................................... 18 4 0.25 0.00 0.25 0.00 0.00 .........................................GAGGGGGGGAGGGAGGGA.............................................................................................. 18 5 0.20 0.00 0.00 0.20 0.00 ......................................GAGGGAGGAGGGAGGGAG................................................................................................. 18 2 0.50 0.00 0.00 0.50 0.00 TGTTCTGGGxTATTTT------GAG................................................................................................................................ 18 1 1.00 0.00 1.00 0.00 0.00 ................................CGGGGAGGGGGAGGGGGGA...................................................................................................... 19 2 0.50 0.50 0.00 0.00 0.00 ...................................TGTGGGGGAGGGGGGCGG.................................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 ......................................GGGGGAGGGGGGCTGGAGGGA.............................................................................................. 21 1 1.00 0.00 1.00 0.00 0.00 ..................................GGGTTGGGGAGGGGGGAG..................................................................................................... 18 2 0.50 0.00 0.00 0.50 0.00 ....................................TTGGGGGAGGGGGGAGGTAG................................................................................................. 20 1 1.00 0.00 0.00 1.00 0.00 ..........................................GAGGGAGGAGGGAGGGAG............................................................................................. 18 2 0.50 0.00 0.00 0.50 0.00 ....................................GTGGGAGAGGAGGGAGGG................................................................................................... 18 1 1.00 1.00 0.00 0.00 0.00 ........................................GGGGGGGGGGAGGGGGGG............................................................................................... 18 4 0.25 0.00 0.00 0.25 0.00 ..........................................GAGGGTGGAGGGAGGGAG............................................................................................. 18 1 1.00 1.00 0.00 0.00 0.00 ..........................................GAGGGTGGAGGGAGGGAA............................................................................................. 18 1 1.00 1.00 0.00 0.00 0.00 ....................................GTGGTGGAGGGGGGAGGGC.................................................................................................. 19 1 1.00 1.00 0.00 0.00 0.00 ................................GGGGGTGGGGGAGGGGGGA...................................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ..................................TGGGGGGGGAGGGGGGAG..................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ...................................GGGGGGGCAGGGGGGAGGG................................................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 ..................................GGGGGGGGGAGGGCGGAGG.................................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ................................CTGGGTGGGGGAGGAGGGA...................................................................................................... 19 1 1.00 1.00 0.00 0.00 0.00 .......................................AGGGAGGGGGGAxGGAGGG............................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 .....................................TGGGGGAGAGAGGAGGGAGG................................................................................................ 20 1 1.00 1.00 0.00 0.00 0.00 ..................................GGGGGGGGGAGGGGGGATG.................................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ..................................GAGxGGTGGAGGGGGGAGGG................................................................................................... 19 1 1.00 0.00 0.00 1.00 0.00 ......................................GGGGGTGGGGGGGGGGAGG................................................................................................ 19 1 1.00 1.00 0.00 0.00 0.00
13	chr2:28441269-28441409 -	38.36	CTGACGTGTGTATGCTGGCTTTT-ATGTATTTACGTTGCATATGAAATGATATTTATAGT---------------AAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CTGGTGTGTGGTGCATGGCTTTTGAAAGATTTATGTGGCAGAGGGGAAAGCACTGGCAGCTGGGGAGGGGAAGGAAAGGGAAGGGTCGCCAATGCCAATGGCCGCGTATCGATAAGCACAATGGGGCACTGGACACCACAC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body GTGGxGTGTGGTGCATGGC.......................................................................................................................... 18 2 5.50 5.50 0.00 0.00 0.00 GTGGxGTGTGGTGCATGGCT......................................................................................................................... 19 1 5.00 5.00 0.00 0.00 0.00 .TTGTGGGTGGTGCATGGC.......................................................................................................................... 18 1 2.00 2.00 0.00 0.00 0.00 ...GTGGGTGGTGCATGGCTG........................................................................................................................ 18 1 1.00 1.00 0.00 0.00 0.00 ...........................GATTTCTGTGGxAGAGGGG............................................................................................... 18 1 1.00 1.00 0.00 0.00 0.00 ..GGTGxGTGGTGCATGGCTGT....................................................................................................................... 19 2 0.50 0.50 0.00 0.00 0.00 .................................................................AAGGGAAGGGAAGGGAAGGG........................................................ 20 1 1.00 1.00 0.00 0.00 0.00 ............................................................TTGGGAGGGGAAGGAAGGGGA............................................................ 21 1 1.00 1.00 0.00 0.00 0.00 ............................................................TGGGGAGGGAAAGGAAGGGGA............................................................ 21 1 1.00 1.00 0.00 0.00 0.00 .......................................................GCAGCTGGAGxGGGGAAGG................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ................................................................GAGGGGAGGGAAAGGGAGG.......................................................... 19 1 1.00 1.00 0.00 0.00 0.00 .TGGGTTGTGGTGCATGGC.......................................................................................................................... 18 1 1.00 1.00 0.00 0.00 0.00 ..............................................................GAGAGGGGAGGGAAAGGGA............................................................ 19 1 1.00 1.00 0.00 0.00 0.00 ..TGGGTGTGGTGCATGGCT......................................................................................................................... 18 1 1.00 1.00 0.00 0.00 0.00
4	chr3:2170016-2170202 +	35.85	CTGACG--------------------------------------------------------------TGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TTGATGCCTGTGTGTGTGTGTGTGTGTGTGTCCAGTCGGTGTCATGAGGCGTATGCCGTGTGTGTGTGTGTGTGAGACGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATGTGCAGCTGAAGAGCCTGTCCATTGCACAATCCCCACCCC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ........TGTGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................... 24 35 0.71 0.11 0.00 0.60 0.00 .......GTGTGTGTGTGTGTGTGTGTGTG............................................................................................................................................................. 23 41 0.15 0.00 0.00 0.15 0.00 .........GTGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................... 23 41 0.15 0.00 0.00 0.15 0.00 ...........GTACGTGTGTGTGTGTGTG............................................................................................................................................................. 19 46 0.11 0.04 0.04 0.02 0.00 .........GTACGTGTGTGTGTGTGTG............................................................................................................................................................... 19 46 0.11 0.04 0.04 0.02 0.00 ........TGTGTGTGTGTGTGTGTGTGTGTT........................................................................................................................................................... 24 17 0.24 0.00 0.06 0.18 0.00 ..........TGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................... 22 49 0.08 0.00 0.00 0.08 0.00 ........TGTGTGTGTGTGTGTGTGTGTG............................................................................................................................................................. 22 49 0.08 0.00 0.00 0.08 0.00 ........TGTGTGTGTGTGTGTGTGT................................................................................................................................................................ 19 35 0.09 0.03 0.00 0.06 0.00 ............TTTGTGTGTGTGTGTGTG............................................................................................................................................................. 18 49 0.06 0.02 0.02 0.02 0.00 ........TTTGTGTGTGTGTGTGTG................................................................................................................................................................. 18 49 0.06 0.02 0.02 0.02 0.00 ............TGTGTGTGTGTGTGTGTGT............................................................................................................................................................ 19 35 0.09 0.03 0.00 0.06 0.00 ..........TTTGTGTGTGTGTGTGTG............................................................................................................................................................... 18 49 0.06 0.02 0.02 0.02 0.00 ..........TGTGTGTGTGTGTGTGTGT.............................................................................................................................................................. 19 35 0.09 0.03 0.00 0.06 0.00
6	chrXL_group3a:1181652-1181747 +	33.45	CTGACGTG-----------------------TGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CCATCGTGTAACAGCTAGTACTGCCCTCCTATATGTAGTATATTTTTTCTATCTGCATAGTGTATGAGTGTGTGTGTTGTGTGTGCACATTCTATA---------------------------------------------------- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ...................................................................GTGTGTGTGTTGTGAGGG............................................................... 18 1 3.00 3.00 0.00 0.00 0.00 ....................................................................TGTGTGTGTTCTGTGTCCA............................................................. 19 1 1.00 1.00 0.00 0.00 0.00 ...................................................................GTTTGTGTGTTGTTTGTGC.............................................................. 19 1 1.00 1.00 0.00 0.00 0.00
12	chrXR_group8:6270433-6270495 +	27.74	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TAG-----------------------------------------------------AGTAATCAGAACGCTCTACAAATAGCAACAAGCCA-------TCTTCCATCC-TCAATCTCTGCCCC-A Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body
20	chr4_group3:5983361-5983409 -	22.76	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA CAGGCAGGAGCAGGAC----------------------------------------------------------------------------CAGAGGTATCCCCCCCTCCCCCTCCCCTCTAGA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ...GCAGGAGCAGCAC----------------------------------------------------------------------------CAGTGG........................... 19 27 0.04 0.00 0.04 0.00 0.00
18	chr4_group5:314922-314966 -	17.89	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA GGTGTATGCGTTCGTTAAC--------------------------------------------------------------------------------TGTCTACACAAGCCTTTGCGCCCCCA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body
23	chrXL_group1a:7586530-7586566 -	16.62	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA ---------------------------------------------------------------------------------------GCTACTCGTCGTCCTTGGCCCCCATTTCGCCACCCAG- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body
28	chrXR_group8:1539504-1539528 -	12.04	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA T--------------------------------------------------------------------------------------------------CTTTCGCTCCACTCTCGCTGCATC-- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body		None
1	chr2:10306186-10306193 +	4.88	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA C---------------------------------------------------------------------------------------------------------------------GCCTCTC Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body	None	None
5	chrXL_group1e:9077872-9077875 +	1.63	CTGACGTGTGTATGCTGGCTTTTATGTATTTACGTTGCATATGAAATGATATTTATAGTAAACAGATTATTTTATATGCAGGTATATGCAAGTCGAGGTCCTCCACACTGCACTCGCCGCCTCGA TCTT------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body	None	None