Possible Orthologs for dme-mir-279

droSim1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 chr3R:24712183-24712312 + 97.7
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ACTGGAGCTGGAATTGGAATTCATACTGCTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.................................................................................TGACTAGATCCACACTCATT.............................20115721.001375.0010458.002634.001254.00
.................................................................................TGACTAGATCCACACTCATTAA...........................2217388.00871.003195.00528.002794.00
.................................................................................TGACTAGATCCACACTCATTA............................2115755.001032.002790.00511.001422.00
.................................................................................TGACTAGATCCACACTCAT..............................1912951.00256.002284.00257.00154.00
.................................................................................TGACTAGATCCACACTCATTAAA..........................2312442.00396.00561.0083.001402.00
.................................................................................TGACTAGATCCACACTCATTAC...........................221599.0025.00377.0063.00134.00
.................................................................................TGACTAGATCCACACTCA...............................181377.001.00311.0052.0013.00
.................................................................................TGACTAGATCCACACTCATC.............................201252.001.00190.0044.0017.00
.................................................................................TGACTAGATCCACACTCATTAAAA.........................241204.0032.0019.003.00150.00
....................................AGTGGGTGGGGGTCCAGTGTTTCACA....................................................................261181.00179.001.000.001.00
.................................................................................TGACTAGATCCACACTCATTT............................211135.0016.00102.0014.003.00
.................................................................................TGACTAGATCCACACTCATTAT...........................22191.0031.0038.009.0013.00
.................................................................................TGACTAGATCCACACTCATTAAC..........................23180.001.0027.001.0051.00
.....................................GTGGGTGGGGGTCCAGTGTTTCACA....................................................................25170.0070.000.000.000.00
.................................................................................TGACTAGATCCACACTCATA.............................20164.004.0051.009.000.00
.................................................................................TGACTAGATCCCCACTCATTAA...........................22164.0064.000.000.000.00
.................................................................................TGACTAGATCCACACTCCTTA............................21151.0033.0018.000.000.00
.................................................................................TGACTAGATCCACACTCAC..............................19141.000.0037.003.001.00
.................................................................................TGACTAGATCCACACTCT...............................18137.000.0033.004.000.00
.................................................................................TGACTAGATCCACACTCATTAAT..........................23136.0011.0015.001.009.00
.................................................................................TGACTAGATCCACACTCATTAAAAA........................25130.009.002.000.0019.00
.................................................................................TGACTAGATCCACACTCATTACA..........................23124.009.003.000.0012.00
.................................................................................TGACTAGATCCACACTCATG.............................20122.000.0017.003.002.00
.................................................................................TGACTAGATCCACACTCCTT.............................20121.0017.004.000.000.00
.................................................................................TGGCTAGATCCACACTCATT.............................20119.004.0012.001.002.00
.................................................................................TGACTAGATCCACACTCATTAG...........................22118.002.006.002.008.00
....................................AGTGGGTGGGGGTCCAGTGTTTCA......................................................................24117.0017.000.000.000.00
.................................................................................TGACTAGATCCACCCTCATTA............................21115.0015.000.000.000.00
.................................................................................TGACTAGATCCACACCCATT.............................20115.005.006.001.003.00
....................................AGTGGGTGGGGGTCCAGTGTTTCAC.....................................................................25114.0014.000.000.000.00
.................................................................................TGACTAGATCCACGCTCATT.............................20114.003.008.003.000.00
.................................................................................TGACTAGATCCACACTCATTTT...........................22113.000.0013.000.000.00
.................................................................................TGACTAGATCCACACTCAA..............................19112.000.007.002.003.00
.................................................................................TGACTAGATCCACACTCATTACC..........................23112.000.0011.000.001.00
.................................................................................TGACTAGATCCACACTCATTAAAT.........................24112.002.004.000.006.00
.................................................................................TGACTATATCCACACTCATT.............................20112.000.006.004.002.00
.................................................................................TGACTAGATCCGCACTCATT.............................20111.005.003.003.000.00
.................................................................................TGACTAGATCCCCACTCATTAAA..........................23111.0011.000.000.000.00
.................................................................................TGACTAGATCCACACTCATTATT..........................23111.000.0010.000.001.00
.................................................................................TGACTAGATCCACACTCATAA............................21111.000.008.000.003.00
.................................................................................TGACTAGGTCCACACTCATTAA...........................22111.004.002.000.005.00
.................................................................................CGACTAGATCCACACTCATT.............................20111.003.007.000.001.00
.................................................................................TGACTAGATCCACACTCATTACT..........................23110.001.006.002.001.00
.................................................................................TGACTAGATCCACACTCATTG............................2119.000.006.001.002.00
.................................................................................TGACTAGATCCACACTCATTATA..........................2319.006.000.000.003.00
.................................................................................TGACTAGATCCACACTCG...............................1819.000.007.002.000.00
.................................................................................TGACTAGATCCACACTCATTAAG..........................2318.002.004.000.002.00
.................................................................................TGACTAGATCCATACTCATTA............................2118.003.004.000.001.00
.................................................................................TGACTAGATCCACGCTCATTAA...........................2218.000.003.000.005.00
.................................................................................TGGCTAGATCCACACTCATTA............................2118.004.003.001.000.00
.................................................................................TGACTAGATCCACACTCAG..............................1918.000.007.001.000.00
.................................................................................TGGCTAGATCCACACTCATTAA...........................2218.000.005.000.003.00
.................................................................................TGACTAGATCCACACTCATTCA...........................2218.005.002.000.001.00
.....................................GTGGGTGGGGGTCCAGTGTTTCA......................................................................2318.008.000.000.000.00
.................................................................................TGACTACATCCACACTCATT.............................2018.000.003.001.004.00
..................................................................................GACTAGATCCACACTCATT.............................1918.004.003.001.000.00
.................................................................................TGACTAGATACACACTCATT.............................2017.004.002.000.001.00
.................................................................................TGACTAGATCCGCACTCATTAA...........................2217.004.001.001.001.00
.....................................GTGGGTGGGGGTCCAGTGTTTCAC.....................................................................2417.007.000.000.000.00
.................................................................................TGACTAGACCCACACTCATT.............................2017.000.004.003.000.00
.................................................................................TTACTAGATCCACACTCATTAA...........................2217.000.003.000.004.00
.................................................................................TGACTAGAGCCACACTCATT.............................2017.002.004.001.000.00
.................................................................................TGACTAGGTCCACACTCATT.............................2016.001.004.000.001.00
.................................................................................TGACTAGATCCACACTCGTT.............................2016.004.000.002.000.00
.................................................................................TGAATAGATCCACACTCATT.............................2016.004.001.001.000.00
.................................................................................TGACTAGATCCTCACTCATTAA...........................2216.006.000.000.000.00
.................................................................................TGACTAGATCCACACCCATTA............................2116.001.004.000.001.00
.................................................................................TGACTAGATCCACACTCATTAAAAC........................2515.000.000.000.005.00
.................................................................................TGACTAGATCCACACTCATTGA...........................2215.004.000.000.001.00
.................................................................................TGACTAGATCCACTCTCATT.............................2015.002.003.000.000.00
................................................................................CTGACTAGATCCACACTC................................1815.000.003.002.000.00
.................................................................................TGACTAGAACCACACTCATT.............................2015.001.004.000.000.00
.................................................................................TGACTGGATCCACACTCATTAA...........................2215.000.001.001.003.00
.................................................................................TGACTAGAGCCACACTCATTAA...........................2215.002.001.000.002.00
.................................................................................TGACTAGATCCACACTCGT..............................1915.001.003.001.000.00
.................................................................................TGACTATATCCACACTCAT..............................1915.000.003.002.000.00
.................................................................................TGGCTAGATCCACACTCAT..............................1915.001.001.001.002.00
.................................................................................GGACTAGATCCACACTCATT.............................2015.004.001.000.000.00
.................................................................................AGACTAGATCCACACTCATT.............................2015.001.003.001.000.00
................................................................................CTGACTAGATCCACACTCATT.............................2115.001.002.002.000.00
.................................................................................TGACTAGATCCACACCCATTAA...........................2215.000.004.000.001.00
.................................................................................TTACTAGATCCACACTCATT.............................2015.000.002.001.002.00
.................................................................................AGACTAGATCCACACTCATTAA...........................2215.004.001.000.000.00
.................................................................................TGACTAGATCTACACTCATT.............................2015.002.002.000.001.00
.................................................................................TGACTAGATCCACCCTCATTAA...........................2215.003.001.000.001.00
.................................................................................TGACTAGATCCACACTCATTAAAAAA.......................2614.000.002.000.002.00
.................................................................................TGACTAGCTCCACACTCATT.............................2014.000.002.001.001.00
.................................................................................TGACCAGATCCACACTCATT.............................2014.002.000.002.000.00
.................................................................................TGACTAGATCCACAATCATTAAA..........................2314.003.000.000.001.00
.................................................................................TGACTGGATCCACACTCATT.............................2014.001.002.001.000.00
....................................AGTGGGTGGGGGTCCAGTGGTTCACA....................................................................2614.004.000.000.000.00
.................................................................................TGACTAGACCCACACTCATTAA...........................2214.002.000.000.002.00
.................................................................................TGCCTAGATCCACACTCATTAAA..........................2314.003.000.000.001.00
.................................................................................TGTCTAGATCCACACTCATTAA...........................2214.003.001.000.000.00
.....................................GTGGGTGGGGGTCCAGTGTTTCACC....................................................................2514.004.000.000.000.00
.................................................................................TGACTAGATCCACACTTATT.............................2014.000.001.002.001.00
.................................................................................TGACTAGATCCACGCTCATTA............................2114.001.003.000.000.00
.................................................................................CGACTAGATCCACACTCATTA............................2114.002.002.000.000.00
.................................................................................TGACTAAATCCACACTCATTAAA..........................2314.002.000.000.002.00
.................................................................................TGACTAGATCAACACTCATT.............................2014.002.001.000.001.00
.................................................................................TGACTAGACCCACACTCATTA............................2114.001.002.000.001.00


droSec1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 super_4:3904072-3904201 + 97.7
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ACTGGAGCTGGAATTGGAATTCATACTGCTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
.................................................................................TGACTAGATCCACACTCATT.............................2017439.00656.001744.005039.00
.................................................................................TGACTAGATCCACACTCAT..............................1915220.003.00305.004912.00
.................................................................................TGACTAGATCCACACTCATTA............................2113150.00455.001757.00938.00
.................................................................................TGACTAGATCCACACTCATTAA...........................2212105.00184.001430.00491.00
....................................AGTGGGTGGGGGTCCAGTGTTTCACA....................................................................2611161.00100.00969.0092.00
.....................................GTGGGTGGGGGTCCAGTGTTTCACA....................................................................251437.0032.00357.0048.00
.................................................................................TGACTAGATCCACACTCATTAAA..........................231403.0027.00278.0098.00
.................................................................................TGACTAGATCCACACTCATTAC...........................221130.0014.0072.0044.00
....................................AGTGGGTGGGGGTCCAGTGTTTCA......................................................................24179.0011.0054.0014.00
....................................AGTGGGTGGGGGTCCAGTGTTTCAC.....................................................................25176.007.0064.005.00
.................................................................................TGACTAGATCCACACTCATTT............................21165.0015.005.0045.00
.....................................GTGGGTGGGGGTCCAGTGTTTCA......................................................................23164.0010.0044.0010.00
.................................................................................TGACTAGATCCACACTCATTAT...........................22150.009.0012.0029.00
.....................................GTGGGTGGGGGTCCAGTGTTTCAC.....................................................................24140.005.0031.004.00
.................................................................................TGACTAGATCCACACTCATTAAAA.........................24129.000.0023.006.00
.................................................................................TGACTAGATCCACACTCATTAAT..........................23122.000.008.0014.00
.................................................................................TGACTAGATCCACACTCA...............................18119.001.005.0013.00
.................................................................................TGACTAGATCCACACTCATA.............................20117.001.001.0015.00
.................................................................................TGACTAGATCCACACTCATTACA..........................23117.000.0013.004.00
.................................................................................TTACTAGATCCACACTCATT.............................20115.001.003.0011.00
.................................................................................TGACTAGATCCACACTCAAT.............................20114.005.000.009.00
.................................................................................CGACTAGATCCACACTCATT.............................20114.002.002.0010.00
....................................AGTGGGTGGGGGTCCAGTGTTTC.......................................................................23114.004.009.001.00
.................................................................................TGACTAAATCCACACTCAT..............................19112.000.000.0012.00
.................................................................................TGACTAGATCCACACTCAA..............................19111.000.001.0010.00
.................................................................................TGGCTAGATCCACACTCATT.............................20111.001.000.0010.00
.................................................................................TGACTAAATCCACACTCATT.............................20111.000.001.0010.00
.................................................................................TGACTAGATCCACACTCACT.............................20111.008.001.002.00
.................................................................................TGACTAGATCCACGCTCATT.............................20110.001.003.006.00
.....................................GTGGGTGGGGGTCCAGTGTTTC.......................................................................22110.002.008.000.00
.................................................................................TCACTAGATCCACACTCAT..............................1919.000.000.009.00
.................................................................................TGACTAGATCCACACTCATC.............................2019.000.004.005.00
....................................AGTGGGTGGGGGTCCAGTGTT.........................................................................2119.005.002.002.00
.................................................................................TGACTAGATCCACATTCATT.............................2019.002.004.003.00
.................................................................................TGAATAGATCCACACTCAT..............................1919.000.000.009.00
.................................................................................TGACTATATCCACACTCATT.............................2019.000.001.008.00
.................................................................................TGACTAGATCCACACTCATTAAG..........................2318.001.004.003.00
....................................AGTGGGTGGGGGTCCAGTGTTT........................................................................2218.002.006.000.00
.................................................................................TGACTAGATCCACACTCAATA............................2118.004.001.003.00
.................................................................................TGACTAGATCAACACTCATT.............................2018.000.001.007.00
.................................................................................TGACTAGATTCACACTCATT.............................2018.000.005.003.00
.................................................................................TGACTAGATCCATACTCATT.............................2018.000.006.002.00
.................................................................................TGACTAGATCxxCACTCATT.............................1818.001.004.003.00
.................................................................................TGACTAGGTCCACACTCATT.............................2017.000.004.003.00
.................................................................................TGACTGGATCCACACTCATT.............................2017.001.000.006.00
.................................................................................TGACTAGAACCACACTCATT.............................2017.000.002.005.00
.................................................................................TGACTAGATCCACACTTATT.............................2017.000.003.004.00
...........................................GGGGGTCCAGTGTTTCAC.....................................................................1817.000.006.001.00
.................................................................................TGAATAGATCCACACTCATT.............................2017.001.000.006.00
.................................................................................TGACTAGATCxxCACTCATTA............................1917.000.007.000.00
.................................................................................TGACTAGATCCACACTCACTA............................2117.004.001.002.00
.................................................................................TGGCTAGATCCACACTCAT..............................1917.000.001.006.00
.................................................................................TGACTAGATCCACACTCATTC............................2117.003.002.002.00
..................................................................................GACTAGATCCACACTCATT.............................1917.000.000.007.00
.................................................................................TGACTAGATCTACACTCATT.............................2017.001.005.001.00
.................................................................................TGACTAGATCCGCACTCATT.............................2016.000.003.003.00
.................................................................................TGACTAGATACACACTCATT.............................2016.000.001.005.00
.................................................................................TGACTAGATCAACACTCAT..............................1916.000.000.006.00
.................................................................................TGACTACATCCACACTCAT..............................1916.000.000.006.00
.................................................................................TGACTAGATACACACTCAT..............................1916.000.000.006.00
.................................................................................TGACTAGATCCACACTCATTAG...........................2216.000.004.002.00
.................................................................................TGACTATATCCACACTCAT..............................1916.000.000.006.00
.................................................................................TGACTAGATCCACACTCATTTT...........................2216.000.000.006.00
.................................................................................TAACTAGATCCACACTCATT.............................2016.001.001.004.00
.................................................................................TGATTAGATCCACACTCATT.............................2016.000.004.002.00
....................................AGTGGGTGGGGGTCCAGTGTTTCACAA...................................................................2716.000.006.000.00
.................................................................................TGACTAGATCCACACTTAT..............................1916.000.002.004.00
.................................................................................TGACTAGATCCTCACTCATT.............................2015.000.003.002.00
.................................................................................TGACTAGATCCATACTCATTA............................2115.000.005.000.00
.................................................................................CGACTAGATCCACACTCAT..............................1915.000.000.005.00
....................................AGTGGGCGGGGGTCCAGTGTTTCACA....................................................................2615.000.005.000.00
.................................................................................TGACTxxATCCACACTCATTA............................1915.000.003.002.00
.................................................................................TGACTAGATCCACACTCATTAAAAA........................2515.000.005.000.00
.................................................................................TGACTAGATCCACACTCAC..............................1915.000.001.004.00
.................................................................................AGACTAGATCCACACTCATT.............................2015.001.001.003.00
.................................................................................TGACTAGATCCACACTCATTAAC..........................2315.000.004.001.00
.................................................................................TGACTAGATCCACACCCAT..............................1915.000.000.005.00
.................................................................................TGACAAGATCCACACTCATT.............................2015.000.002.003.00
.................................................................................TGACTAGATCCACATTCATTA............................2115.000.005.000.00
..................................................................................GACTAGATCCACACTCATTA............................2015.000.001.004.00
.................................................................................TGACCAGATCCACACTCATT.............................2014.000.001.003.00
.................................................................................TGACCAGATCCACACTCATTA............................2114.001.002.001.00
.................................................................................TGACTAGATCCGCACTCATTA............................2114.000.001.003.00
.................................................................................TGACAAGATCCACACTCAT..............................1914.000.000.004.00
.................................................................................TGACTGGATCCACACTCATTAA...........................2214.000.004.000.00
.................................................................................TGACTGGATCCACACTCAT..............................1914.000.001.003.00
.................................................................................TGACTAGATCCACGCTCATTA............................2114.000.003.001.00
.................................................................................TGACTAGATCCACAATCATT.............................2014.000.001.003.00
....................................AGTGGGTGGGGGTCCAGTGTTTTACA....................................................................2614.000.004.000.00
.................................................................................TGACTAGATCCACCCTCATT.............................2014.001.001.002.00
..............................................................TTGATTTTCTTAGTATTTG.................................................1914.000.004.000.00
....................................AGTGGGTGGGGTTCCAGTGTTTCACA....................................................................2614.000.003.001.00
.................................................................................TGACTAGATCCACACCCATT.............................2014.002.001.001.00
.................................................................................TGACTACATCCACACTCATT.............................2014.002.001.001.00
....................................ACTGGGTGGGGGTCCAGTGTTTCACA....................................................................2614.000.004.000.00
.................................................................................GGACTAGATCCACACTCATT.............................2014.001.000.003.00
.................................................................................TGACTAGGTCCACACTCATTAA...........................2214.000.003.001.00
.................................................................................TGACTAGATCCATACTCATTAA...........................2214.000.004.000.00
.................................................................................TGACTAGATCCACACCCATTAA...........................2214.000.003.001.00
....................................AGTGGGTGGGGGTCTAGTGTTTCACA....................................................................2614.000.004.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACA....................................................................2514.000.000.004.00


droYak2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr3R:21456037-21456166 - 94.67
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ACTGGAACTAGAATTGAAATTCATACTACTGTTTTTAGTGGGTGAGGGTCCAGTGCTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
.................................................................................TGACTAGATCCACACTCATT.............................2016776.001125.001253.00331.001802.002265.00
.................................................................................TGACTAGATCCACACTCATTA............................2112875.001421.00305.00141.00414.00594.00
.................................................................................TGACTAGATCCACACTCAT..............................1911966.00114.00646.000.00921.00285.00
.................................................................................TGACTAGATCCACACTCATTAA...........................2211579.00736.0086.0056.00151.00550.00
....................................AGTGGGTGAGGGTCCAGTGCTTCACA....................................................................261604.00537.007.0048.0012.000.00
.................................................................................TGACTAGATCCACACTCATTAAA..........................231318.00195.0012.0013.0013.0085.00
.....................................GTGGGTGAGGGTCCAGTGCTTCACA....................................................................251277.00244.002.0029.002.000.00
.................................................................................TGACTAGATCCACACTCATTAC...........................221145.0040.007.009.008.0081.00
.................................................................................TGACTAGATCCACACTCATTT............................211120.0017.0026.002.0035.0040.00
.....................................GTGGGTGAGGGTCCAGTGCTTCAC.....................................................................24185.0079.000.004.002.000.00
.................................................................................TGACTAGATCCACACTCATTAT...........................22176.0037.009.004.0014.0012.00
....................................AGTGGGTGAGGGTCCAGTGCTTCAC.....................................................................25172.0069.000.003.000.000.00
.................................................................................TGACTAGATCCCCACTCATTAA...........................22165.0053.002.000.005.005.00
.................................................................................TGACTAGATCCACACTCCTTA............................21163.0039.007.000.0013.004.00
.................................................................................TGACTAGATCCACACTCATC.............................20157.002.002.001.003.0049.00
.................................................................................TGACTAGATCCACACTCCTT.............................20151.0016.0014.000.0021.000.00
.................................................................................TGACTAGATCCACACTCA...............................18135.002.002.000.004.0027.00
.................................................................................TGACTAGATCCCCACTCATT.............................20131.001.004.000.0014.0012.00
.................................................................................TGACTAGATCCACACTCGTT.............................20128.007.006.000.0015.000.00
.................................................................................TGACTAGATCCACCCTCATTA............................21127.0014.001.000.0012.000.00
.....................................GTGGGTGAGGGTCCAGTGCTTCA......................................................................23123.0015.001.005.002.000.00
.................................................................................TGACTAGATCCACACTCATTAAAA.........................24120.0011.000.000.000.009.00
....................................AGTGGGTGAGGGTCCAGTGCTTCA......................................................................24119.0012.001.004.002.000.00
.................................................................................TGACTAGATCCACACTCCT..............................19119.001.007.000.0011.000.00
.....................................GTGGGTGAGGGTCCAGTGCTT........................................................................21118.001.001.0010.006.000.00
.................................................................................TGACTAGATCCACACTCATTACA..........................23117.0014.002.000.001.000.00
.................................................................................TGACTAGATCCACCCTCATT.............................20116.003.002.001.0010.000.00
.................................................................................TGACTAGATCCACACTCGT..............................19114.001.004.000.009.000.00
.................................................................................TGACTAGAGCCACACTCATT.............................20113.001.001.000.0010.001.00
.................................................................................TGACTAGATCCACACTCATTAAT..........................23112.005.000.000.001.006.00
.................................................................................TGACTAGATCCCCACTCATTA............................21112.003.001.000.003.005.00
.................................................................................TGACTAGATCCATACTCATT.............................20112.001.003.000.007.001.00
.................................................................................TGGCTAGATCCACACTCATT.............................20111.001.002.000.005.003.00
.................................................................................TGACTAGATCCACACTCATTC............................21111.000.002.000.008.001.00
.................................................................................CGACTAGATCCACACTCATT.............................20111.003.004.000.003.001.00
.................................................................................TGACTATATCCACACTCATT.............................20111.002.005.000.003.001.00
.................................................................................TGACTAGATACACACTCATT.............................20110.004.001.000.002.003.00
.................................................................................TGACTAGCTCCACACTCATTA............................21110.007.000.000.003.000.00
.................................................................................TGACTACATCCACACTCATT.............................20110.000.001.001.008.000.00
.................................................................................TGACTAGATCCACACTCATTAAC..........................23110.001.000.001.000.008.00
.................................................................................TGACTAGATCAACACTCATT.............................2019.002.000.001.006.000.00
.................................................................................TGACTAGATCCACACCCATT.............................2019.002.004.000.001.002.00
.................................................................................TGACTAGATCCACACTCATTTT...........................2219.000.000.000.004.005.00
.................................................................................GGACTAGATCCACACTCATT.............................2019.005.001.000.003.000.00
.................................................................................TAACTAGATCCACACTCATT.............................2019.000.002.000.005.002.00
.................................................................................TGACTAGATCCACACTCAC..............................1919.000.000.000.005.004.00
.................................................................................TGACTAGGTCCACACTCATT.............................2018.003.001.000.001.003.00
.................................................................................TGACTAGATCCCCACTCAT..............................1918.000.006.000.002.000.00
.................................................................................AGACTAGATCCACACTCAT..............................1918.000.003.000.005.000.00
....................................AGTGGGTGAGGGTCCAGTGC..........................................................................2018.005.000.002.001.000.00
.................................................................................TGACTAGATCCACACTCATG.............................2018.001.000.000.004.003.00
.................................................................................TGACTAGATCCCCACTCATTAAA..........................2318.006.000.000.001.001.00
.....................................GTGGGTGAGGGTCCAGTGCT.........................................................................2018.000.002.006.000.000.00
.................................................................................TGACTGGATCCACACTCATT.............................2018.001.001.000.006.000.00
.................................................................................TGGCTAGATCCACACTCATTA............................2118.004.000.001.001.002.00
..............................................................TTGATTTTCTTAGTATTTG.................................................1918.008.000.000.000.000.00
.................................................................................TGACTAGGTCCACACTCAT..............................1918.000.000.000.008.000.00
.................................................................................TGACTAGATCCACACTCACT.............................2018.001.003.000.002.002.00
.................................................................................TGACTAGAGCCACACTCATTA............................2118.003.002.000.003.000.00
....................................AGTGGGTGAGGGTCCAGTGCT.........................................................................2118.001.001.006.000.000.00
.................................................................................TGACTAGATCCGCACTCAT..............................1918.000.004.000.003.001.00
.................................................................................TGACTAGATCCACACTCAGT.............................2017.001.002.000.004.000.00
.................................................................................TGACTAGATCAACACTCAT..............................1917.000.001.000.006.000.00
.................................................................................TGACTAGAGCCACACTCAT..............................1917.000.001.000.006.000.00
.................................................................................TGACTAGATCCACGCTCATTAA...........................2217.005.000.000.000.002.00
.....................................GTGGGTGAGGGTCCAGTGCTTCACC....................................................................2517.007.000.000.000.000.00
....................................AGTGGGTGAGGGTCCAGTGCTTC.......................................................................2317.003.000.003.001.000.00
.................................................................................TGACTAAATCCACACTCATT.............................2017.001.003.000.003.000.00
.................................................................................TGACTAGATCCACACTC................................1716.000.000.000.006.000.00
.................................................................................TGACCAGATCCACACTCATT.............................2016.000.002.000.004.000.00
.....................................GTGGGTGAGGGTCCAGTGCTTC.......................................................................2216.002.000.004.000.000.00
....................................AGTGGGTGAGGGTCCAGTGCTT........................................................................2216.001.001.003.001.000.00
.................................................................................TGACTAGATCCACACTCATTCA...........................2216.002.000.000.003.001.00
.................................................................................TGACTAGATCCACCCTCAT..............................1916.000.001.000.005.000.00
.................................................................................TTACTAGATCCACACTCATTA............................2116.000.002.001.003.000.00
.................................................................................AGACTAGATCCACACTCATT.............................2016.002.000.000.004.000.00
.................................................................................TTACTAGATCCACACTCATT.............................2016.000.000.000.005.001.00
..................................................................................GACTAGATCCACACTCATT.............................1916.002.002.000.002.000.00
.................................................................................TGACTAGATCCGCACTCATT.............................2015.000.002.000.003.000.00
.....................................GTGGGTGAGGGTCCAGTGC..........................................................................1915.001.000.003.001.000.00
.................................................................................TGACGAGATCCACACTCATT.............................2015.001.001.001.002.000.00
.................................................................................TGACTAGATCCACTCTCATT.............................2015.000.000.000.005.000.00
.................................................................................TGACTAGATCCACACTCATTAAG..........................2315.003.002.000.000.000.00
.................................................................................TGACTAGATCCACACTAATT.............................2015.001.002.000.001.001.00
.................................................................................TGACTAGATCCACACTCATTAG...........................2215.002.001.001.001.000.00
.................................................................................TGACTAGATCCACAATCATT.............................2015.001.001.000.003.000.00
.................................................................................TGACTAGATCCACACTCCTTAA...........................2215.004.001.000.000.000.00
.................................................................................TGAATAGATCCACACTCATT.............................2015.000.002.000.003.000.00
.................................................................................TGACTAGATCCACGCTCATT.............................2015.002.001.000.002.000.00
.................................................................................TGACTAGATCCACACTCATTTA...........................2215.004.000.000.001.000.00
.................................................................................TGACTAGGTCCACACTCATTA............................2115.002.001.000.002.000.00
.................................................................................GGACTAGATCCACACTCATTA............................2115.004.001.000.000.000.00
.................................................................................TGGCTAGATCCACACTCAGT.............................2015.000.001.000.004.000.00
.................................................................................TGACTAGATCCACACTCATTG............................2115.000.000.000.002.003.00
.................................................................................TGACTAGATCCTCACTCATT.............................2014.001.000.000.003.000.00
.................................................................................TGACTAGATCCACACTCTT..............................1914.000.001.000.003.000.00
.................................................................................TGACTAGCTCCACACTCATT.............................2014.000.001.001.002.000.00
.................................................................................TGACTCGATCCACACTCATT.............................2014.000.001.000.003.000.00
.................................................................................TGACTAGATCCATACTCATTA............................2114.003.000.000.001.000.00
.................................................................................TGACTAGATCCACACTCATTACC..........................2314.001.000.000.000.003.00
.................................................................................TGACTAGATCCGCACTCATTA............................2114.002.000.000.002.000.00


droEre2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_4820:2989050-2989173 - 92.4
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ACTG------GAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
.................................................................................TGACTAGATCCACACTCATT.............................20117122.00798.001687.000.0014637.00
.................................................................................TGACTAGATCCACACTCAT..............................1916390.0055.00276.000.006059.00
.................................................................................TGACTAGATCCACACTCATTA............................2113729.00838.00609.000.002282.00
.................................................................................TGACTAGATCCACACTCATTAA...........................2211458.00365.00165.000.00928.00
....................................AGTGGGTGGGGGTCCAGTGTTTCACA....................................................................261537.0066.0015.000.00456.00
.................................................................................TGACTAGATCCACACTCATTT............................211299.008.0037.000.00254.00
.................................................................................TGACTAGATCCACACTCATTAAA..........................231271.0063.0032.000.00176.00
.....................................GTGGGTGGGGGTCCAGTGTTTCACA....................................................................251196.0045.005.000.00146.00
.................................................................................TGACTAGATCAACACTCATT.............................201140.002.002.000.00136.00
.................................................................................TTACTAGATCCACACTCATT.............................201138.002.001.000.00135.00
.................................................................................TGACTATATCCACACTCATT.............................201124.008.002.000.00114.00
.................................................................................TGACTAGATCCACACTCATTAT...........................221107.0016.005.000.0086.00
.................................................................................TGACTAGATCCACACTAATT.............................201106.000.002.000.00104.00
.................................................................................TGAATAGATCCACACTCATT.............................20167.001.003.000.0063.00
.................................................................................TGACTAGATACACACTCATT.............................20164.003.000.000.0061.00
.................................................................................TGACTAGATCCACACTCATTAC...........................22163.0026.008.000.0029.00
.................................................................................TGACTAGATCAACACTCAT..............................19154.000.000.000.0054.00
.................................................................................TGACTAGATCCACACTAAT..............................19152.000.000.000.0052.00
.................................................................................TTACTAGATCCACACTCAT..............................19151.000.000.000.0051.00
.................................................................................TGACTATATCCACACTCAT..............................19144.000.000.000.0044.00
.................................................................................TGACTAGATCCACACTCATTAAT..........................23135.003.004.000.0028.00
.................................................................................TGACTAGATCCACACTCCTTA............................21135.0021.009.000.005.00
.................................................................................CGACTAGATCCACACTCATT.............................20134.008.004.000.0022.00
....................................AGTGGGTGGGGGTCCAGTGTTTCA......................................................................24134.007.001.000.0026.00
.................................................................................TGGCTAGATCCACACTCATT.............................20133.002.003.000.0028.00
.................................................................................TGACTAGATCCAAACTCATT.............................20133.000.001.000.0032.00
.................................................................................TGACTAGATCCACACTCCTT.............................20132.0010.0013.000.009.00
.................................................................................TTACTAGATCCACACTCATTA............................21131.007.000.000.0024.00
.................................................................................TGACTAGATCCACACTCATTTT...........................22129.000.004.000.0025.00
.................................................................................TGACTAGATCCACAATCATT.............................20129.002.001.000.0026.00
.................................................................................TGAATAGATCCACACTCAT..............................19128.001.000.000.0027.00
.................................................................................TGACTACATCCACACTCATT.............................20128.009.004.000.0015.00
.................................................................................TGACTAGATACACACTCAT..............................19124.000.000.000.0024.00
.................................................................................TGACTAGATCCACACTCA...............................18123.000.001.000.0022.00
.................................................................................TGACTAGATCCACACTAATTA............................21123.000.000.000.0023.00
.................................................................................TGACTAGATCxxCACTCATT.............................18121.000.001.000.0020.00
.................................................................................TGACTAGATCCATACTCATT.............................20121.002.002.000.0017.00
.................................................................................TGACTAGATCAACACTCATTA............................21121.000.000.000.0021.00
.................................................................................TGACTAGATCCACCCTCATT.............................20121.002.005.000.0014.00
.....................................GTGGGTGGGGGTCCAGTGTTTCA......................................................................23120.006.001.000.0013.00
.................................................................................TGACTAGATCCACGCTCATT.............................20119.002.003.000.0014.00
.................................................................................GGACTAGATCCACACTCATT.............................20119.004.002.000.0013.00
.................................................................................TGACTAGATCCCCACTCATT.............................20119.002.0010.000.007.00
.................................................................................TGACTAGACCCACACTCATT.............................20119.000.001.000.0018.00
.................................................................................TGACTAGATCCACACTCATC.............................20119.003.003.000.0013.00
.................................................................................TGACTAGATCCACACCCATT.............................20119.002.000.000.0017.00
.................................................................................TGACTATATCCACACTCATTA............................21118.004.000.000.0014.00
.................................................................................TGACTGGATCCACACTCATT.............................20118.001.002.000.0015.00
.................................................................................TGACCAGATCCACACTCATT.............................20118.000.002.000.0016.00
....................................AGTGGGTGGGGGTCCAGTGTTTCAC.....................................................................25117.004.002.000.0011.00
.................................................................................TGACTAGATCTACACTCATT.............................20117.001.001.000.0015.00
.................................................................................TGACTAGATCCACCCTCATTA............................21117.004.0012.000.001.00
.................................................................................TGACTAGATCCACATTCATT.............................20116.001.002.000.0013.00
.................................................................................TGACTAGATCCAAACTCAT..............................19116.000.000.000.0016.00
.................................................................................TGACTAGATCCACACTCGTT.............................20116.001.006.000.009.00
.................................................................................TGACTAGATCCACACTCACT.............................20115.002.001.000.0012.00
.................................................................................TGAATAGATCCACACTCATTA............................21115.001.001.000.0013.00
..................................................................................GACTAGATCCACACTCATT.............................19115.000.002.000.0013.00
.................................................................................TAACTAGATCCACACTCATT.............................20114.001.000.000.0013.00
.................................................................................TGACTAGATCCACACTCATA.............................20114.001.003.000.0010.00
.................................................................................TGACTAGATTCACACTCATT.............................20114.001.002.000.0011.00
.................................................................................TGCCTAGATCCACACTCAT..............................19113.000.000.000.0013.00
.....................................GTGGGTGGGGGTCCAGTGTTTCAC.....................................................................24113.004.001.000.008.00
.................................................................................TGACTAAATCCACACTCATT.............................20113.000.001.000.0012.00
.................................................................................TGACTAGATACACACTCATTA............................21113.002.001.000.0010.00
.................................................................................TGACTAGGTCCACACTCATT.............................20112.002.000.000.0010.00
.................................................................................TGACTAGATCCACACTCATTC............................21112.002.007.000.003.00
.................................................................................TGCCTAGATCCACACTCATT.............................20112.000.000.000.0012.00
.................................................................................TGACTATATCCACACTCATTAA...........................22112.007.001.000.004.00
.................................................................................CGACTAGATCCACACTCATTA............................21112.009.001.000.002.00
.................................................................................TTACTAGATCCACACTCATTAA...........................22111.002.000.000.009.00
.................................................................................CGACTAGATCCACACTCAT..............................19111.000.001.000.0010.00
.................................................................................TGGCTAGATCCACACTCAT..............................19111.000.000.000.0011.00
.................................................................................TGATTAGATCCACACTCATT.............................20111.001.002.000.008.00
.................................................................................TGACTAGATCCCCACTCATTAA...........................22110.005.004.000.001.00
.................................................................................TGACTAGATCCACACTTATT.............................20110.001.002.000.007.00
.................................................................................TGACTAGATCCACACTCCT..............................19110.003.001.000.006.00
.................................................................................TGACTAGATCCACTCTCATT.............................20110.002.002.000.006.00
.................................................................................TGACTAGATCCGCACTCATT.............................20110.000.002.000.008.00
.................................................................................TGGCTAGATCCACACTCATTA............................21110.002.002.000.006.00
....................................AGTGGGTGGGGGTCCAGTGTTTAACA....................................................................26110.001.000.000.009.00
.....................................GTGGGTGTGGGTCCAGTGTTTCACA....................................................................2519.000.000.000.009.00
....................................AGTGGGTTGGGGTCCAGTGTTTCACA....................................................................2619.000.000.000.009.00
.................................................................................TGTCTAGATCCACACTCATT.............................2019.000.001.000.008.00
.................................................................................TGACTAGATCCACACTCATTAAAA.........................2419.002.000.000.007.00
.................................................................................TGACTAGATxCACACTCATT.............................1919.000.000.000.009.00
.................................................................................AGACTAGATCCACACTCATT.............................2019.003.001.000.005.00
.................................................................................TGACTAGATCCACAATCAT..............................1919.000.000.000.009.00
.................................................................................TGACTAGATCCACACCCAT..............................1919.000.000.000.009.00
.................................................................................TGACTAGATCCACACTCATTCA...........................2219.005.002.000.002.00
.................................................................................TGACTAGGTCCACACTCAT..............................1919.000.002.000.007.00
....................................AGTGGGTGGTGGTCCAGTGTTTCACA....................................................................2618.001.000.000.007.00
.................................................................................TGACTAGATCCACACTCATTAAC..........................2318.001.001.000.006.00
.................................................................................TGACTAGAGCCACACTCATT.............................2018.003.005.000.000.00
.................................................................................TGACTAGATCCACACCCATTA............................2118.001.001.000.006.00
.................................................................................TGACTAGCTCCACACTCATT.............................2018.000.000.000.008.00
.................................................................................TGACTAGATCCTCACTCATT.............................2018.002.002.000.004.00
.................................................................................TGACTAGATCCACACTCATTAG...........................2218.002.002.000.004.00
.................................................................................TGACTAGATCGACACTCATT.............................2017.000.001.000.006.00
.................................................................................TGACTAGATCCACACTCAGT.............................2017.001.006.000.000.00
.................................................................................GGACTAGATCCACACTCAT..............................1917.000.001.000.006.00


droFic1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000453776:337748-337858 + 72.72
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
--------------------TCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
SizeHit CountTotal Norm


droEug1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000409787:532529-532670 - 79.35
A------------CTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ATTTGAATCGGAGCTGGAAATGAAACTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCGAGCACGT
SizeHit CountTotal Norm


droBia1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302136:3097220-3097349 - 96.19
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ACTGGAACTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATCTTCTTAGTAGTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
SizeHit CountTotal Norm


droTak1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000415310:301797-301920 + 87.96
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
-------CTGGAATTTGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCATGAATGT
SizeHit CountTotal Norm


droEle1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000491280:1228865-1228988 + 90.17
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
AATG------GAAATGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAGTCATCAAGCACGT
SizeHit CountTotal Norm


droRho1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scf7180000779659:60155-60277 - 87.96
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
AATG------GAAATGGAATTCATACTTCTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTT-TTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCATGCACGT
SizeHit CountTotal Norm


droKik1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scf7180000302466:432600-432739 - 72.49
ACTGGAGCTGGAAT--------TGGAATTCATACT---ACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATT-GATTTTCT--TAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
GCGGCGGCG---ATATCTCGTGTACTATTCATACTACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTTGATT-TCTTCTGATATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAGTCAGCAAACACGT
SizeHit CountTotal Norm


droAna3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
4 scaffold_13340:14200293-14200422 - 79.95
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAG---CACGT
GGCGGCGATACTAATACTACTACTACTACTGTTTTTAGTGGGTGAGGGTCCAGTGTTTCACATTGATTT---CTGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCAGCAAGGCCCACGT
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.................................................................................TGACTAGATCCACACTCATT................................20113174.00621.009050.002402.001101.00
.................................................................................TGACTAGATCCACACTCAT.................................1915478.008.004004.00817.00649.00
.................................................................................TGACTAGATCCACACTCATTA...............................2111567.00126.00400.00512.00529.00
.................................................................................TGACTAGATCCACACTCATTAA..............................2211123.0057.00252.00201.00613.00
.................................................................................TGACTAGATCCACACTCATTAAA.............................231723.005.0057.0014.00647.00
....................................AGTGGGTGAGGGTCCAGTGTTTCACA.......................................................................261706.0050.00622.0013.0021.00
.....................................GTGGGTGAGGGTCCAGTGTTTCACA.......................................................................251459.0057.00391.003.008.00
.................................................................................TGACTAGATCCACACTCATTT...............................211347.0011.00269.0057.0010.00
.....................................GTGGGTGAGGGTCCAGTGTTTCA.........................................................................231250.0064.00178.007.001.00
.................................................................................TGACTAGATCCACACTCATTAT..............................221130.002.0083.0024.0021.00
....................................AGTGGGTGAGGGTCCAGTGTTTCA.........................................................................24183.0018.0060.002.003.00
.................................................................................TGACTAGATCCACACTCATTAAAA............................24174.000.003.001.0070.00
.....................................GTGGGTGAGGGTCCAGTGTTTCAC........................................................................24173.0014.0058.001.000.00
.................................................................................TGACTATATCCACACTCATT................................20165.002.0038.0011.0014.00
.................................................................................TGACTAGATCCACACTAATT................................20164.002.0057.005.000.00
.................................................................................TGACTAGATCCACACTCATTTT..............................22161.001.0046.0013.001.00
.................................................................................TTACTAGATCCACACTCATT................................20152.002.0041.002.007.00
.................................................................................TGGCTAGATCCACACTCATT................................20148.000.0043.004.001.00
.................................................................................TGACTAGATACACACTCATT................................20148.001.0033.0010.004.00
.................................................................................TGACTAGATCCACACTCATTAAT.............................23145.000.0028.004.0013.00
.................................................................................TGACTAGATCAACACTCATT................................20139.001.0033.004.001.00
....................................AGTGGGTGAGGGTCCAGTGTTTCAC........................................................................25138.008.0026.002.002.00
.................................................................................TGACTAGATCCACACTCCTT................................20132.000.000.0019.0013.00
.................................................................................TGACTATATCCACACTCAT.................................19131.000.0025.001.005.00
.................................................................................TGACTAGATCCACACTAAT.................................19130.000.0029.001.000.00
.................................................................................AGACTAGATCCACACTCATT................................20128.000.001.0024.003.00
.................................................................................CGACTAGATCCACACTCATT................................20127.001.0012.008.006.00
.................................................................................TGACTACATCCACACTCATT................................20127.000.0010.0011.006.00
.................................................................................TGACTAGATCCACGCTCATT................................20126.001.0013.009.003.00
.................................................................................TGACTAGATCCACACTCGTT................................20126.000.0011.0014.001.00
.................................................................................TGAATAGATCCACACTCATT................................20123.001.0011.0011.000.00
.................................................................................TGACTAGGTCCACACTCATT................................20123.000.0019.003.001.00
.................................................................................TGACTAGATCCGCACTCATT................................20123.005.0013.004.001.00
.................................................................................TGACTAGATCCATACTCATT................................20121.004.0010.005.002.00
.................................................................................TGACTAGATCAACACTCAT.................................19121.000.0017.004.000.00
.................................................................................GGACTAGATCCACACTCATT................................20121.000.002.0013.006.00
.................................................................................TGACTAGATCCACACTCCTTA...............................21121.000.001.002.0018.00
.................................................................................TGACTAGATACACACTCAT.................................19120.000.0014.005.001.00
.................................................................................TGACTAGATCCACCCTCATT................................20119.001.001.008.009.00
.................................................................................TGACTAGATCCCCACTCATT................................20118.004.002.0010.002.00
.................................................................................TGACTAGATCCACACCCATT................................20118.000.009.005.004.00
.................................................................................TTACTAGATCCACACTCAT.................................19118.000.0017.000.001.00
.................................................................................TGACCAGATCCACACTCATT................................20117.002.0010.003.002.00
.................................................................................TGACTAGATCCACACTCACT................................20117.000.0010.004.003.00
.................................................................................TGACTAGATCCACACTCATA................................20117.000.001.002.0014.00
.................................................................................TGACTAGATCTACACTCATT................................20116.002.0010.002.002.00
.................................................................................TGACTAGATCCACACTCATC................................20116.000.007.008.001.00
.................................................................................TGACTAGATCCACACTCATTACA.............................23116.000.000.000.0016.00
.................................................................................TGACTAGACCCACACTCATT................................20115.000.007.005.003.00
.................................................................................TGACTGGATCCACACTCATT................................20115.001.007.005.002.00
.................................................................................TGACTAGATCCACACTCATTAAAAA...........................25115.000.000.000.0015.00
.....................................GTGGGTGAGGGTCCAGTGTTT...........................................................................21115.007.003.003.002.00
.................................................................................TGACTAGATCCACACTCATTAC..............................22114.001.001.003.009.00
.................................................................................TGACTAGATCCACACTCATTTTT.............................23114.000.008.005.001.00
.................................................................................TGACTAGATCCACTCTCATT................................20113.001.002.006.004.00
.................................................................................TCACTAGATCCACACTCATT................................20113.001.007.002.003.00
.................................................................................TGGCTAGATCCACACTCAT.................................19113.001.0011.001.000.00
.................................................................................TGACTAGATCCACACTCCT.................................19113.000.001.002.0010.00
.................................................................................TGACTAGATCCACACTCTTT................................20113.001.003.008.001.00
....................................AGTGGGTGAGGGTCCAGTGTTTC..........................................................................23113.001.0012.000.000.00
.................................................................................CGACTAGATCCACACTCAT.................................19113.000.007.004.002.00
.................................................................................TGACTAGATCCACACTCATTCA..............................22112.000.002.000.0010.00
.................................................................................TGACTAGATCCCCACTCATTAA..............................22112.000.000.003.009.00
.................................................................................TGACTAGATCCAAACTCATT................................20112.003.006.003.000.00
.................................................................................TGACGAGATCCACACTCATT................................20112.000.000.0011.001.00
.................................................................................TGACTAGATCCACATTCATT................................20112.000.009.003.000.00
.................................................................................TAACTAGATCCACACTCATT................................20112.001.004.005.002.00
.................................................................................TGACTAGACCCACACTCAT.................................19112.000.0010.000.002.00
.....................................GTTGGTGAGGGTCCAGTGTTTCACA.......................................................................25112.000.0012.000.000.00
....................................AGGGGGTGAGGGTCCAGTGTTTCACA.......................................................................26112.001.0010.001.000.00
.................................................................................TGACTAAATCCACACTCATT................................20111.002.006.001.002.00
.................................................................................TGACTAGATCCATACTCAT.................................19111.000.0010.000.001.00
.................................................................................TGATTAGATCCACACTCATT................................20111.000.006.002.003.00
.................................................................................TGACTATATCCACACTCATTA...............................21111.000.002.000.009.00
.................................................................................TGACTAGATCCACACTCATG................................20111.000.001.009.001.00
.....................................GTGGGTGAGGGTCCAGTGTTTC..........................................................................22110.004.004.002.000.00
.................................................................................TGACTCGATCCACACTCATT................................20110.000.002.007.001.00
.................................................................................TGACTAGATCCACACTTATT................................20110.000.007.002.001.00
.................................................................................TGACTAGAGCCACACTCATT................................20110.000.000.0010.000.00
.................................................................................AGACTAGATCCACACTCAT.................................19110.000.000.006.004.00
.................................................................................GGACTAGATCCACACTCAT.................................19110.000.002.007.001.00
.................................................................................TGACTAGATCCCCACTCATTAAA.............................23110.000.000.000.0010.00
.................................................................................TGACTAGATCCACACTCAGT................................2019.000.000.007.002.00
.................................................................................TGACTAGATCCACACTCATTAG..............................2219.000.000.000.009.00
.................................................................................TGACTAGATCCACACTCCTTAA..............................2219.000.000.000.009.00
.................................................................................TGACTGGATCCACACTCAT.................................1919.000.004.004.001.00
.................................................................................TGACTAGATCCCCACTCAT.................................1919.000.003.002.004.00
.................................................................................TGACTAGATCCACAATCATT................................2019.000.008.001.000.00
.................................................................................TGACTAGATCCTCACTCATT................................2019.002.002.002.003.00
..................................................................................GACTAGATCCACACTCATT................................1919.000.007.001.001.00
.................................................................................TGACTAGATTCACACTCATT................................2019.000.009.000.000.00
.................................................................................TGAATAGATCCACACTCAT.................................1918.000.003.003.002.00
.................................................................................TGACTAGATCGACACTCATT................................2018.003.003.002.000.00
....................................AGTGGGTGAGGGTCCAGTGTTT...........................................................................2218.004.001.002.001.00
.................................................................................TGACTAGATCCACACTCGT.................................1918.000.003.004.001.00
.................................................................................TGACTAGATCCGCACTCAT.................................1918.000.005.003.000.00
.................................................................................TGCCTAGATCCACACTCATT................................2018.000.005.003.000.00
.................................................................................TGACTAGGTCCACACTCAT.................................1918.000.006.002.000.00
....................................AGTGGGTGAGGGTCCAGTGT.............................................................................2018.004.001.003.000.00
.................................................................................TGACTAGATCxxCACTCATT................................1817.000.007.000.000.00
.................................................................................TGACTAGATCCACACTCATTC...............................2117.002.002.002.001.00


droBip1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000395971:963485-963602 + 64.92
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAG---CACGT---------
ACT---------------------ACTACTGTTTTTAGTGGGTGAGGGTCCAGTGTTTCACATTGATT-TCT--GTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCAGCAAGGCCCACGTGCTCCCCAT
SizeHit CountTotal Norm


dp4 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr2:1881900-1882031 + 83.85
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAA---GCACGT
AGTGGTT-TTAAGTTCGCGATCATACTACTGTTTTTAGTGAGTGAGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCAACAGAATGCACGT
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
.................................................................................TGACTAGATCCACACTCATT................................2013381.00627.001142.001332.00280.00
.................................................................................TGACTAGATCCACACTCATTA...............................2112242.00265.001611.00344.0022.00
.................................................................................TGACTAGATCCACACTCATTAA..............................2211880.00157.001511.00203.009.00
.................................................................................TGACTAGATCCACACTCAT.................................191453.003.00216.00219.0015.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACA.......................................................................261429.00107.00302.0020.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCA.........................................................................231393.00348.0024.0021.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACA.......................................................................251307.00218.0080.009.000.00
.................................................................................TGACTAGATCCACACTCATTAAA.............................231240.008.00212.0019.001.00
.....................................GTGAGTGAGGGTCCAGTGTTTCAC........................................................................241169.00144.0020.005.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCA.........................................................................241119.0099.0018.002.000.00
.................................................................................TGACTAGATCCCCACTCATTAA..............................221114.000.00114.000.000.00
....................................AGTGAGTGAGGGTCCAGTG..............................................................................19187.0065.001.0021.000.00
.................................................................................TGACTAGATCCACACTCCTTA...............................21172.000.0070.002.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCAC........................................................................25162.0036.0026.000.000.00
.................................................................................TGACTAGATCCACACTCATTT...............................21160.0022.008.0030.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTC..........................................................................22158.0049.003.006.000.00
....................................AGTGAGTGAGGGTCCAGTGT.............................................................................20152.0042.001.009.000.00
.....................................GTGAGTGAGGGTCCAGTGTT............................................................................20146.0034.001.0011.000.00
.....................................GTGAGTGAGGGTCCAGTGTTT...........................................................................21140.0035.001.004.000.00
....................................AGTGAGTGAGGGTCCAGTGTT............................................................................21138.0033.000.005.000.00
.................................................................................TGACTAGATCCACCCTCATTA...............................21126.000.0026.000.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTC..........................................................................23125.0016.008.001.000.00
.................................................................................TGACTAGATCCACACTCATTAT..............................22123.007.0012.004.000.00
....................................AGTGAGTGAGGGTCCAGTGTTT...........................................................................22117.009.007.001.000.00
.................................................................................TGACTAGATCCACACTCCTT................................20114.001.009.004.000.00
.................................................................................TGACTAGATCCACACTCATTAAT.............................23112.002.0010.000.000.00
.................................................................................TGACTAGCTCCACACTCATTA...............................21111.000.0010.001.000.00
.................................................................................TGACTAGATCCGCACTCATTAA..............................22110.001.008.001.000.00
.................................................................................TGACTAGATCCACACTCATTAAAA............................24110.000.0010.000.000.00
.................................................................................TGACTAGATCCACACTCGTT................................2019.000.004.005.000.00
.................................................................................TGACTGGATCCACACTCATT................................2019.000.002.007.000.00
.................................................................................TGACTAGATCCACACTCATTAC..............................2219.002.003.003.001.00
.................................................................................TGACTAGATACACACTCATTAA..............................2219.000.008.001.000.00
.................................................................................TGACTAGATCCACTCTCATTAA..............................2218.000.008.000.000.00
.................................................................................CGACTAGATCCACACTCATTA...............................2118.001.006.001.000.00
.................................................................................TGACTAGATCCACACTCATTCA..............................2218.000.006.002.000.00
....................................AGTGAGTGAGGGTCCAGTT..............................................................................1918.005.000.003.000.00
.................................................................................TGACTAGATCCACACTCATTAAG.............................2318.000.008.000.000.00
.................................................................................TGACGAGATCCACACTCATTA...............................2117.000.007.000.000.00
.....................................GTGAGTGAGGGTCCAGTGT.............................................................................1917.007.000.000.000.00
.................................................................................TGACTAGATCCACCCTCCTTA...............................2117.000.007.000.000.00
.................................................................................TGGCTAGATCCACACTCATTA...............................2117.001.006.000.000.00
.................................................................................TGACTAGATCCACACTCATTAAAAA...........................2516.000.006.000.000.00
.................................................................................TGACTAGATCCATACTCATT................................2016.000.001.005.000.00
.................................................................................TGACTAGATCCCCACTCATTCA..............................2216.000.006.000.000.00
.................................................................................TGGCTAGATCCACACTCATT................................2016.000.003.003.000.00
.................................................................................TGACTAGATCCACACTCAGTAA..............................2216.000.004.002.000.00
.................................................................................TGACTAGATCCACTCTCATTA...............................2116.000.006.000.000.00
.................................................................................TGACTAGATTCACACTCATT................................2016.000.004.002.000.00
.................................................................................TGACTAGAGCCACACTCATTA...............................2116.000.004.002.000.00
.................................................................................TGACTAGATCCACACTCATTGA..............................2216.000.006.000.000.00
.....................................GTGAGTGAGGGTCCAGTG..............................................................................1816.004.000.002.000.00
.................................................................................TGACTAGATCCACACTCACTAA..............................2216.000.006.000.000.00
.................................................................................TGACTAGATCCACACTCATTAG..............................2216.000.005.001.000.00
.................................................................................TGACTAGATCCACACTAATTAA..............................2216.000.006.000.000.00
.................................................................................TGACTAGGTCCACACTCATT................................2016.001.002.003.000.00
.................................................................................TGACTAGATCCACACTCATTTT..............................2216.002.000.004.000.00
.................................................................................TGACTAGATCCACACTCATTTA..............................2216.000.006.000.000.00
.................................................................................TGACTAGATCCACACTCATTC...............................2116.004.002.000.000.00
.................................................................................TCACTAGATCCACACTCATTAA..............................2215.000.005.000.000.00
.................................................................................TGACTAGAACCACACTCATTA...............................2115.000.005.000.000.00
.................................................................................TGACTAGATCTACACTCATTA...............................2115.000.004.001.000.00
.................................................................................GGACTAGATCCACACTCATT................................2015.000.001.004.000.00
.................................................................................TGACTAGATACACACTCATTA...............................2115.000.005.000.000.00
.................................................................................GGACTAGATCCACACTCATTA...............................2115.000.005.000.000.00
.................................................................................TGACTAGATCCCCACTCATT................................2015.000.004.001.000.00
.................................................................................TGACTAGATCCACACTCAGT................................2015.000.003.002.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACC.......................................................................2615.000.003.002.000.00
.................................................................................CGACTAGATCCACACTCATT................................2015.001.002.002.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACAA......................................................................2715.003.002.000.000.00
.................................................................................TGACTAGGTCCACACTCATTAA..............................2215.000.005.000.000.00
.................................................................................TGACTAGATCCACAATCATTA...............................2115.000.005.000.000.00
.................................................................................TGACTAGATCCACACCCATTAA..............................2215.003.002.000.000.00
.................................................................................TGAATAGATCCACACTCATT................................2015.000.003.002.000.00
.................................................................................TGACTAGATCCACCCTCATTAA..............................2215.000.004.001.000.00
.................................................................................TGACTAGATCCACACTCCTTAA..............................2215.000.005.000.000.00
....................................AGCGAGTGAGGGTCCAGTGTTTCACA.......................................................................2615.001.004.000.000.00
.................................................................................TGACTAGATCCACCCTCATT................................2015.000.004.001.000.00
.................................................................................TGACTAGATTCACACTCATTAA..............................2214.000.004.000.000.00
.................................................................................TGACTAGATCCACACTCATG................................2014.000.002.002.000.00
.................................................................................TGACTAGATCCAAACTCATT................................2014.001.001.002.000.00
.................................................................................TGAATAGATCCACACTCATTA...............................2114.000.003.001.000.00
.................................................................................TAACTAGATCCACACTCATTAA..............................2214.000.003.000.001.00
.................................................................................TGACTAGATCCACACTCTTTAA..............................2214.001.002.001.000.00
.................................................................................TGACTAGATACACACTCATT................................2014.000.002.001.001.00
.................................................................................TGTCTAGATCCACACTCATTAA..............................2214.000.004.000.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACAT......................................................................2614.002.002.000.000.00
.................................................................................TGACTAGATCCACACTTATTA...............................2114.000.004.000.000.00
.................................................................................TGACTAGATCCACAATCATT................................2014.000.002.002.000.00
.................................................................................TGACTAGATCAACACTCATTAA..............................2214.000.004.000.000.00
.................................................................................TGACTAGATCCACACTAATTA...............................2114.000.002.002.000.00
.................................................................................TGACTAGATCCACACCCATT................................2014.002.000.002.000.00
.................................................................................TGACTAGATCCCCACTCATTAAA.............................2314.000.004.000.000.00
....................................AGTGAGTGAGGGTCCAGTTT.............................................................................2014.002.000.002.000.00
.................................................................................TGACTAGATCCACATTCATT................................2014.002.002.000.000.00
.................................................................................TGACTAGAGCCACACTCATT................................2014.000.001.003.000.00
.................................................................................TTACTAGATCCACACTCATT................................2014.000.001.002.001.00
.................................................................................TGACTAGATCCACACTCATC................................2014.003.000.001.000.00
.................................................................................TGACTAGATCCACGCTCATTAA..............................2214.000.004.000.000.00
.................................................................................TGACTAGATCCCCTCTCATTAA..............................2214.000.003.001.000.00
.................................................................................TGACTAGATCCTCACTCATTAA..............................2214.000.004.000.000.00


droPer1 - 2 hits found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 super_7:2045298-2045429 + 83.85
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAA---GCACGT
AGTGGTT-TTAAGTTCGCGATCATACTACTGTTTTTAGTGAGTGAGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCAACAGAATGCACGT
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
.................................................................................TGACTAGATCCACACTCATT................................2014638.00210.00371.001468.002319.00270.00
.................................................................................TGACTAGATCCACACTCATTA...............................2111519.0051.00436.00352.00380.00300.00
.................................................................................TGACTAGATCCACACTCATTAA..............................2211332.0033.00291.00221.00275.00512.00
.................................................................................TGACTAGATCCACACTCAT.................................1911096.001.00158.00244.00662.0031.00
.....................................GTGAGTGAGGGTCCAGTGTTTCA.........................................................................231369.00324.005.005.0035.000.00
.................................................................................TGACTAGATCCACACTCATTAAA.............................231261.002.0052.0027.0024.00156.00
.....................................GTGAGTGAGGGTCCAGTGTTTC..........................................................................221211.00194.002.002.0013.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACA.......................................................................261206.0063.0069.0021.0053.000.00
.....................................GTGAGTGAGGGTCCAGTGTTT...........................................................................211199.00178.000.004.0017.000.00
.....................................GTGAGTGAGGGTCCAGTGTT............................................................................201165.00142.000.003.0020.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACA.......................................................................251147.00103.0010.0011.0023.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCAC........................................................................241138.00114.003.007.0014.000.00
.................................................................................TGACTAGATCCACACTCATTT...............................21199.0010.003.0034.0049.003.00
....................................AGTGAGTGAGGGTCCAGTGT.............................................................................20155.0031.000.005.0019.000.00
.................................................................................TGACTAGATCCCCACTCATTAA..............................22143.000.0034.004.005.000.00
....................................AGTGAGTGAGGGTCCAGTG..............................................................................19142.0020.002.004.0016.000.00
.................................................................................TGACTAGATCCACACTCATTAAAA............................24141.000.008.001.002.0030.00
.....................................GTGAGTGAGGGTCCAGTGT.............................................................................19132.0026.000.001.005.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCA.........................................................................24131.0014.007.002.008.000.00
.................................................................................TGACTAGATCCACACTCCTTA...............................21124.000.0015.001.008.000.00
.................................................................................TGACTAGATCCACACTCATTAT..............................22123.000.003.007.0012.001.00
....................................AGTGAGTGAGGGTCCAGTGTTT...........................................................................22122.0012.000.002.008.000.00
.................................................................................TGACTAGATCCACACTCCTT................................20122.000.002.007.0013.000.00
.................................................................................TGACTAGAGCCACACTCATT................................20122.000.001.005.0016.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCAC........................................................................25120.005.005.003.007.000.00
....................................AGTGAGTGAGGGTCCAGTGTT............................................................................21120.0012.000.000.008.000.00
.................................................................................TGACTAGATCCACACTCGTT................................20118.000.002.008.008.000.00
.................................................................................TGACTAGATCCATACTCATT................................20116.000.000.002.0014.000.00
.................................................................................TGACTAGATCCACACTCATTAC..............................22116.001.004.002.003.006.00
.................................................................................CGACTAGATCCACACTCATT................................20114.000.001.006.007.000.00
.................................................................................GGACTAGATCCACACTCATT................................20112.000.001.005.006.000.00
.................................................................................TGACTAGATCCACACTCAGT................................20112.000.000.003.009.000.00
.................................................................................TGACTAGATCCACACCCATT................................20111.000.001.001.009.000.00
.................................................................................TGACTAGATCCCCACTCATT................................20111.000.000.002.009.000.00
.................................................................................AGACTAGATCCACACTCATT................................20111.000.000.001.0010.000.00
.................................................................................TGACTAGATCCACGCTCATT................................20111.000.001.000.009.001.00
.................................................................................TGACTCGATCCACACTCATT................................20111.000.001.009.001.000.00
.................................................................................TGACTAGATCCACTCTCATT................................20111.000.001.001.009.000.00
.................................................................................TGACTAGATCCACACTCATTC...............................21111.001.004.002.004.000.00
.................................................................................TGACTAGATCCACACTCATTAAAAA...........................25110.000.005.000.000.005.00
.....................................GTGAGTGAGGGTCCAGTG..............................................................................18110.006.000.000.004.000.00
.................................................................................TGACGAGATCCACACTCATT................................2019.000.001.000.008.000.00
.................................................................................TGACTAGATACACACTCATT................................2019.000.001.001.007.000.00
.................................................................................TGACTAGATCCACAATCATT................................2019.000.001.003.005.000.00
.................................................................................TGACTAGATCCACACTAATT................................2019.000.000.002.007.000.00
.................................................................................TGAATAGATCCACACTCATT................................2019.000.000.002.007.000.00
.................................................................................TGACTAGATCCACACTCATG................................2018.000.001.000.006.001.00
.................................................................................TGACTAGATCCACACTCA..................................1818.000.001.001.002.004.00
.................................................................................TGACTATATCCACACTCATT................................2018.001.000.003.004.000.00
.................................................................................TGACGAGAGCCACACTCATT................................2018.000.000.000.008.000.00
....................................AGTGAGTGAGGGTCCAGTT..............................................................................1918.001.000.004.003.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTT..........................................................................2217.007.000.000.000.000.00
.................................................................................TGACAAGATCCACACTCATT................................2017.000.000.000.007.000.00
.................................................................................TGACTAGGTCCACACTCATT................................2017.000.000.002.003.002.00
.................................................................................TGACTAGAGCCACACTCAT.................................1917.000.000.000.007.000.00
.................................................................................TGACTAGATCCACCCTCATTA...............................2116.000.003.001.002.000.00
.................................................................................TGACTAGCTCCACACTCATTA...............................2116.000.004.001.001.000.00
.................................................................................TGACTGGATCCACACTCATT................................2016.000.000.003.003.000.00
.................................................................................TGACTAGATCGACACTCATT................................2016.000.001.000.005.000.00
.................................................................................TGACTAGATCCACACTCATTAAC.............................2316.000.000.000.000.006.00
.................................................................................TGACTAGATCCACACGCATT................................2016.000.000.000.006.000.00
.................................................................................TGACTAGATCCACTCTCATTA...............................2116.000.003.001.002.000.00
.................................................................................CGACTAGATCCACACTCAT.................................1916.000.000.002.004.000.00
.................................................................................TAACTAGATCCACACTCATT................................2016.000.000.001.005.000.00
.................................................................................TGACTAGATCCACACTCATC................................2016.000.000.001.003.002.00
.................................................................................TGACTAGATCCGCACTCATT................................2016.000.000.001.005.000.00
.................................................................................TGGCTAGATCCACACTCATTAA..............................2215.000.001.001.003.000.00
.................................................................................TCACTAGATCCACACTCATT................................2015.000.000.001.004.000.00
.................................................................................AGACTAGATCCACACTCATTA...............................2115.000.000.000.005.000.00
.................................................................................TGACTAGATCCACACTCTTTAA..............................2215.000.000.002.003.000.00
.................................................................................TGACTAGATCCACCCTCAT.................................1915.000.000.001.004.000.00
.................................................................................TGAGTAGATCCACACTCATT................................2015.000.000.000.005.000.00
.................................................................................TGACTAAATCCACACTCATT................................2015.000.000.000.004.001.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACT.......................................................................2515.001.000.001.003.000.00
.................................................................................TAACTAGATCCACACTCATTA...............................2115.000.000.000.003.002.00
.................................................................................TGACTAGATCTACACTCATT................................2015.000.000.003.002.000.00
.................................................................................TGACTAGATCCACACTCGTTA...............................2115.000.002.001.002.000.00
.................................................................................CGACTAGATCCACACTCATTA...............................2115.000.002.000.002.001.00
.................................................................................TGACTAGATCCACACTCATTCA..............................2215.000.002.001.002.000.00
.................................................................................TGACTAGATCCACAATCATTA...............................2115.000.003.001.000.001.00
.................................................................................TGACTAGATCCACACTCATTTT..............................2215.000.000.002.003.000.00
.....................................GTGAGTGAGGGTCCAGGGTTTCA.........................................................................2314.003.000.000.001.000.00
.................................................................................TGACTAGATCCACACTCAG.................................1914.000.000.000.004.000.00
.................................................................................TGACTAGATCCACACGCATTA...............................2114.000.001.001.002.000.00
.................................................................................TGACTAGATCTACACTCATTA...............................2114.000.000.004.000.000.00
.................................................................................TGTCTAGATCCACACTCATT................................2014.000.000.000.004.000.00
.................................................................................TGGCTAGATCCACACTCATT................................2014.000.000.000.004.000.00
.................................................................................TGACTAGATCCAAACTCATTAA..............................2214.000.000.000.001.003.00
.................................................................................TGACTAGATCCACACTCACT................................2014.000.000.001.003.000.00
.................................................................................TGACTAGATACACACTCAT.................................1914.000.001.000.003.000.00
.................................................................................TGACTAGATCCACACTCACTAA..............................2214.000.002.000.002.000.00
.................................................................................TGACTAGATCCACACTCATTAG..............................2214.000.002.001.001.000.00
.................................................................................TTACTAGATCCACACTCATTA...............................2114.000.001.001.002.000.00
.................................................................................TGAATAGATCCACACTCAT.................................1914.000.000.002.002.000.00
.................................................................................TGACTGGATCCACACTCATTA...............................2114.000.001.002.000.001.00
.................................................................................TGACGAGATCCACACTCATG................................2014.000.000.001.003.000.00
.................................................................................TGACTAGATCCACACTCATTAAT.............................2314.000.003.001.000.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCT.........................................................................2314.004.000.000.000.000.00
.................................................................................TGAGTAGATCCACACTCAT.................................1914.000.000.000.004.000.00
.................................................................................TGACTGGATCCATACTCATT................................2013.000.000.000.003.000.00
.................................................................................TGACTAGATCAACACTCATT................................2013.000.000.000.002.001.00
2 super_33:530931-531012 + 24.64
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ACTTTTCCCCGAATTTCCTTCCA-----------------TTTGGCGTTCAAGTTTTCCCC---CGTTTTCTCCGTGTGTGTTT----------------------------TCGTATAATGAGATGCGA
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo


droWil1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_181108:1734340-1734482 + 68.38
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATC--------------AAGCACGT
ACTACTACTACGACTAGAACAACTACTACTGTTTTTAGTGAGTGAGGGTCCAGTGTTTCACATTAAATAT-TTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCGAAAATAAAAAAAGAAACACGT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.................................................................................TGACTAGATCCACACTCATT...........................................20124432.00193.008003.009331.006905.00
.................................................................................TGACTAGATCCACACTCAT............................................19115275.005.005425.008141.001704.00
.................................................................................TGACTAGATCCACACTCATTA..........................................2118043.0088.005423.00743.001789.00
.................................................................................TGACTAGATCCACACTCATTAA.........................................2217875.0043.005626.00525.001681.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACA..................................................................................2613480.0074.002267.001139.000.00
.................................................................................TGACTAGATCCACACTCATTAAA........................................2313020.002.002707.0096.00215.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACA..................................................................................2511886.00122.001184.00580.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCA....................................................................................231797.00112.00125.00560.000.00
.................................................................................TGACTAGATCCACACTCATTAAAA.......................................241381.001.00369.002.009.00
....................................AGTGAGTGAGGGTCCAGTGTTTCA....................................................................................241339.0019.00154.00166.000.00
.................................................................................TGACTAGATCCACACTCATTT..........................................211322.002.0051.00146.00123.00
....................................AGTGAGTGAGGGTCCAGTGTTTCAC...................................................................................251320.0012.00224.0084.000.00
.................................................................................TGACTAGATCCACACTCATTAC.........................................221263.004.0095.0018.00146.00
.................................................................................TGACTAGATCCACACTCATTAT.........................................221263.002.00136.0070.0055.00
.....................................GTGAGTGAGGGTCCAGTGTTTCAC...................................................................................241251.0033.00157.0061.000.00
.................................................................................TGACTAGATCCACACTCA.............................................181180.000.0016.001.00163.00
.................................................................................TGACTAGATCCACACTCATTAAT........................................231138.000.0096.0021.0021.00
.................................................................................TGACTAGATCCACACTCATC...........................................201104.000.008.009.0087.00
.....................................GTGAGTGAGGGTCCAGTGTTTC.....................................................................................22199.007.0047.0044.001.00
.................................................................................TGACTAGATCCACACTCATTAAAAA......................................25186.000.0083.000.003.00
.....................................GTGAGTGAGGGTCCAGTGTTT......................................................................................21172.0014.0042.0016.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTC.....................................................................................23166.003.0049.0014.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACAA.................................................................................27166.000.0061.005.000.00
.................................................................................CGACTAGATCCACACTCATT...........................................20156.000.0015.0033.008.00
.................................................................................TGACTAGATCCAAACTCATT...........................................20152.000.002.0036.0014.00
.................................................................................TGACTAGATCCACACTCATA...........................................20151.000.0032.006.0013.00
....................................AGTGAGTGAGGGTCCAGTGTTT......................................................................................22150.008.0034.008.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACAA.................................................................................26149.000.0043.006.000.00
.................................................................................TGACTAGATCCACACTCATTACA........................................23144.000.0041.002.001.00
.................................................................................TGACTAGATCCACACTCATTTT.........................................22144.000.0011.0017.0016.00
.................................................................................TGACTAGATCCACACTCATTAAC........................................23143.000.0027.003.0013.00
.................................................................................CGACTAGATCCACACTCAT............................................19141.000.005.0036.000.00
.................................................................................TGACTAGATCCACAATCATT...........................................20138.000.005.0033.000.00
.................................................................................TGACTAGATCCACACTAATT...........................................20136.000.008.0028.000.00
.................................................................................TGACTAGATCAACACTCATT...........................................20135.000.007.0027.001.00
.................................................................................TGACTAGATACACACTCATT...........................................20135.000.0010.0024.001.00
.................................................................................TGACTAGATCCAAACTCAT............................................19135.000.004.0028.003.00
.................................................................................TGACTATATCCACACTCATT...........................................20135.000.0014.0014.007.00
.................................................................................TGACTAGATCCACACTCATTAG.........................................22135.000.0026.006.003.00
.................................................................................TGACTAGATCCACACTCAC............................................19134.000.003.004.0027.00
.................................................................................TGACTAGATCCACAATCAT............................................19134.000.001.0033.000.00
.................................................................................TGACTAGATACACACTCAT............................................19134.000.003.0030.001.00
.................................................................................TGACTAGATCCACACTAAT............................................19132.000.009.0023.000.00
.................................................................................TGACTAGATCCATACTCATT...........................................20131.000.0011.0013.007.00
.................................................................................TGACTAGATCAACACTCAT............................................19130.000.009.0021.000.00
.................................................................................TGACTAGATCCACGCTCATT...........................................20128.001.0010.0012.005.00
.................................................................................AGACTAGATCCACACTCATT...........................................20126.000.004.0022.000.00
.................................................................................TGACTAGGTCCACACTCATT...........................................20125.000.004.0014.007.00
.................................................................................TTACTAGATCCACACTCATT...........................................20122.000.008.0011.003.00
.................................................................................TGACTAGATCCACACTCATTAAG........................................23122.000.0016.004.002.00
.................................................................................TGACTATATCCACACTCAT............................................19121.000.0013.005.003.00
.................................................................................TGACTAGATCCGCACTCATT...........................................20121.000.008.0010.003.00
.................................................................................TGAATAGATCCACACTCATT...........................................20121.000.005.0016.000.00
.................................................................................TGACTAGATCCGCACTCAT............................................19119.000.006.0011.002.00
.................................................................................GGACTAGATCCACACTCATT...........................................20119.000.004.0014.001.00
.................................................................................CGACTAGATCCACACTCATTA..........................................21119.000.0015.004.000.00
.................................................................................TGACTAGACCCACACTCATT...........................................20119.001.006.009.003.00
.................................................................................TGACTAGATCCACACCCATT...........................................20119.000.006.0011.002.00
.................................................................................TGACTAGATCCAGACTCATT...........................................20119.000.000.000.0019.00
.................................................................................TGACCAGATCCACACTCATT...........................................20119.000.005.0011.003.00
.................................................................................TGACTAGATCCACACTCAA............................................19118.000.0014.002.002.00
.................................................................................GGACTAGATCCACACTCAT............................................19118.000.001.0017.000.00
.................................................................................TGACTAGATCCACACTCATTAAAT.......................................24118.000.0017.001.000.00
.................................................................................TGAATAGATCCACACTCAT............................................19118.000.002.0016.000.00
.................................................................................TGACTAGATCCATACTCAT............................................19117.000.003.0012.002.00
....................................AGTGAGTGAGGGTCCAGTGTTTCCCA..................................................................................26117.000.001.0016.000.00
.................................................................................TGACTAGGTCCACACTCAT............................................19117.000.007.0010.000.00
.................................................................................TGACTAGATCCACACTCT.............................................18116.000.000.000.0016.00
.....................................GTGAGTGAGGGTCCAGTGTTTCAA...................................................................................24116.002.0010.004.000.00
.................................................................................AGACTAGATCCACACTCAT............................................19116.000.001.0015.000.00
.................................................................................TGACTAGATCCACACTCACT...........................................20116.002.004.007.003.00
.................................................................................TGACTAGATCCACATTCATT...........................................20116.000.001.0012.003.00
.................................................................................TGACTAGATCCACACCCAT............................................19116.000.004.0010.002.00
..................................................................................GACTAGATCCACACTCATT...........................................19115.000.001.008.006.00
.................................................................................TGACTAGATCCACACTCATTATT........................................23115.001.004.000.0010.00
.................................................................................TTACTAGATCCACACTCATTAA.........................................22115.000.0014.001.000.00
.................................................................................TGCCTAGATCCACACTCATT...........................................20115.000.004.009.002.00
.................................................................................TCACTAGATCCACACTCATT...........................................20114.000.007.007.000.00
.................................................................................TGACTAGATCCACACTCCTT...........................................20114.000.001.0013.000.00
.................................................................................TGGCTAGATCCACACTCAT............................................19114.000.006.007.001.00
.................................................................................TGACCAGATCCACACTCAT............................................19114.000.005.008.001.00
.................................................................................TGACTAGATCCACACTCATTACT........................................23114.000.005.002.007.00
.................................................................................TAACTAGATCCACACTCATT...........................................20114.000.002.0011.001.00
.................................................................................TGACTAGATCCACACTCGT............................................19114.000.005.007.002.00
.................................................................................TGACTAGATCCACACTCATTG..........................................21114.000.009.003.002.00
.................................................................................TTACTAGATCCACACTCAT............................................19114.000.0011.003.000.00
.................................................................................TGGCTAGATCCACACTCATT...........................................20114.000.005.004.005.00
.................................................................................TGACTAGATCTACACTCATT...........................................20114.000.004.009.001.00
.................................................................................TGACTAGATCCACACTAATTA..........................................21113.000.0011.002.000.00
.................................................................................TGACTAGATCCACGCTCAT............................................19113.000.003.0010.000.00
.................................................................................TGACTAGATCAACACTCATTAA.........................................22113.000.0011.001.001.00
.................................................................................TGATTAGATCCACACTCAT............................................19113.000.005.008.000.00
.................................................................................TGACTAGATCCACACTCGTT...........................................20112.000.002.006.004.00
.................................................................................TGACTAGATCCAAACTCATTAA.........................................22112.000.004.004.004.00
.................................................................................TGACTAGCTCCACACTCAT............................................19112.000.002.0010.000.00
.................................................................................TGACTAGATCAACACTCATTA..........................................21112.000.009.003.000.00
.................................................................................TGACTAGATCCTCACTCATT...........................................20112.000.008.004.000.00
.................................................................................TGATTAGATCCACACTCATT...........................................20112.000.003.008.001.00
.................................................................................TGACTATATCCACACTCATTA..........................................21111.001.004.002.004.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACC..................................................................................25111.000.000.0011.000.00
.................................................................................TGACTAGATCCACACTTAT............................................19111.000.001.0010.000.00


droVir3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_12822:2330907-2331031 + 79.35
ACTGGAGCTGGAATTGGAATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTT-AGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ACGAG---TGGATCGAATATGCGTACTACTGTTTTTAGTGAGTGAGGGTCCAGTGTTTCACATTCGTTTTTTCAAGTATTTGTGACTAGATCCACACTCATTAACAACGGTAGTTCAATCAGCAAATA---
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
..................................................................................TGACTAGATCCACACTCATT.............................2015887.00617.001748.00338.001499.001685.00
..................................................................................TGACTAGATCCACACTCAT..............................1911748.0016.00873.00240.00148.00471.00
..................................................................................TGACTAGATCCACACTCATTA............................2111546.00324.00406.00238.00215.00363.00
..................................................................................TGACTAGATCCACACTCATTAA...........................2211501.00190.00273.00227.00337.00474.00
..................................................................................TGACTAGATCCACACTCATC.............................201475.0038.0038.003.00267.00129.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACA.....................................................................261382.00209.0010.00163.000.000.00
..................................................................................TGACTAGATCCACACTCATTAAA..........................231305.0024.0028.00126.0057.0070.00
.....................................GTGAGTGAGGGTCCAGTGTTTCA.......................................................................231132.00116.008.008.000.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCA.......................................................................241131.00114.003.0014.000.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCACA.....................................................................251116.0091.004.0021.000.000.00
..................................................................................TGACTAGATCCACACTCA...............................18185.002.002.002.0025.0054.00
..................................................................................TGACTAGATCCACACTCATTAACC.........................24170.001.000.000.0061.008.00
..................................................................................TGACTAGATCCACACTCATTT............................21164.007.0022.005.005.0025.00
....................................AGTGAGTGAGGGTCCAGTGTTTCAC......................................................................25150.0037.005.008.000.000.00
..................................................................................TGACTAGATCCACACTCATTACC..........................23147.004.000.000.0026.0017.00
..................................................................................TGACTAGATCCACACTCATTAC...........................22144.004.005.001.0013.0021.00
..................................................................................TGACTAGATCCACACTCATTAAAA.........................24138.000.001.0028.005.004.00
..................................................................................TGACTAGATCCACACTCATTAT...........................22136.006.0015.007.002.006.00
..................................................................................TGACTAGATCCACACTCATTC............................21134.005.007.003.0013.006.00
....................................AGTGAGTGAGGGTCCAGTGTTTC........................................................................23129.0024.004.001.000.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCAC......................................................................24123.0016.005.002.000.000.00
..................................................................................TGACTAGATCCACACTCATTAAT..........................23118.000.002.006.002.008.00
..................................................................................TGACTAGATCCACACTCATTAACCC........................25117.000.000.000.0016.001.00
....................................AGTGAGTGAGGGTCCAGTGTTT.........................................................................22117.0012.005.000.000.000.00
..................................................................................TGACTAGATCCACACTCATTAAC..........................23115.001.000.004.003.007.00
..................................................................................CGACTAGATCCACACTCATT.............................20114.002.008.001.002.001.00
..................................................................................TGACTAGATCCACACTCCTT.............................20114.000.009.005.000.000.00
..................................................................................TGACTAGATCCCCACTCATT.............................20114.000.003.001.006.004.00
.....................................GTGAGTGAGGGTCCAGTGTTTC........................................................................22114.0011.002.001.000.000.00
..................................................................................TGACTAGATCCACACTCATA.............................20113.001.004.001.003.004.00
..................................................................................TGACTAGATCCACACTCATTAAAAA........................25113.000.000.0012.001.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCAA......................................................................25111.0011.000.000.000.000.00
.....................................GTGAGTGAGGGTCCAGTGTTT.........................................................................21111.007.003.001.000.000.00
..................................................................................TGACTAGATCCACACTCCTTA............................21111.000.006.005.000.000.00
..................................................................................TGACTAGATCCACACTCATTATCC.........................24111.000.000.000.0011.000.00
..................................................................................TGGCTAGATCCACACTCATT.............................20110.000.004.002.003.001.00
..................................................................................TGACTAGATCCACACTCAGT.............................20110.000.0010.000.000.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACAA....................................................................27110.007.000.002.001.000.00
..................................................................................TGACTACATCCACACTCATT.............................2019.001.005.001.000.002.00
....................................AGTGAGTGAGGGTCCAGTGTT..........................................................................2119.007.002.000.000.000.00
..................................................................................TGACTAGATCCACACTCATCT............................2119.001.002.000.003.003.00
..................................................................................TGACTAGATCCACCCTCATT.............................2019.000.007.001.000.001.00
....................................AGTGAGTGAGGGTCCAGTGT...........................................................................2019.007.002.000.000.000.00
..................................................................................TGACTAGATCCACACTCATTTT...........................2219.000.003.003.002.001.00
..................................................................................TGACTAGATCCACACTCATTACCC.........................2418.000.000.000.005.003.00
..................................................................................TGACTAGATACACACTCATT.............................2018.001.003.001.000.003.00
..................................................................................TGACTAGATCCACACTCATTAAG..........................2318.000.000.007.001.000.00
..................................................................................TGACTAGATCCACACTCCT..............................1918.000.003.005.000.000.00
..................................................................................CGACTAGATCCACACTCATTA............................2118.003.005.000.000.000.00
..................................................................................TGACTAGATCCACGCTCATT.............................2018.000.003.000.003.002.00
..................................................................................TGACTAGATCCACACTCAC..............................1917.000.000.000.002.005.00
..................................................................................TGACTATATCCACACTCATT.............................2017.001.003.003.000.000.00
..................................................................................TGACTAAATCCACACTCATT.............................2017.000.005.001.001.000.00
..................................................................................TGACTAGACCCACACTCATT.............................2017.000.005.000.002.000.00
....................................AGTGAGTGAGGGTCCAGTG............................................................................1917.003.004.000.000.000.00
..................................................................................TGACTGGATCCACACTCATT.............................2017.001.003.000.000.003.00
..................................................................................TGACTAGATCCACACTCATTCC...........................2217.000.001.000.005.001.00
..................................................................................TGACTAGATCCACACTCATTATC..........................2317.000.000.000.004.003.00
..................................................................................TGACTAGATCCACACTCGTT.............................2017.000.005.001.000.001.00
..................................................................................TGACTGGATCCACACTCAT..............................1917.000.004.002.000.001.00
..................................................................................TGACTAGATCCACACTCGT..............................1917.000.005.002.000.000.00
..................................................................................TGACTAGATCCACACTCATCAA...........................2216.001.000.003.002.000.00
..................................................................................TGACTAGATCCGCACTCAT..............................1916.000.002.002.000.002.00
..................................................................................TGACTAGATCCCCACTCATTA............................2116.001.001.002.002.000.00
.....................................GTGAGTGAGGGTCCAGTGTTTCAA......................................................................2416.006.000.000.000.000.00
..................................................................................TGACTCGATCCACACTCATT.............................2016.000.006.000.000.000.00
..................................................................................TGACTAGATCCACACTCACT.............................2016.000.001.002.000.003.00
..................................................................................TGACTAGATCCACACTAATT.............................2016.003.002.000.001.000.00
..................................................................................TGACTAGATCCCCACTCAT..............................1916.000.004.001.001.000.00
..................................................................................TGACTAGATCCACACTCAG..............................1916.000.002.000.001.003.00
..................................................................................TGACTAGATCAACACTCATT.............................2016.001.005.000.000.000.00
..................................................................................TGACTAGATCCACACTCATG.............................2016.000.003.000.001.002.00
....................................AGTGAGTGAGGGTCCAGTGTTTCACC.....................................................................2616.002.000.004.000.000.00
..................................................................................TGACTAGATCCACACTCATTACA..........................2315.001.000.004.000.000.00
..................................................................................TGACTAGATCCACCCTCATTA............................2115.000.003.002.000.000.00
..................................................................................TGACTAGATCCACCCTCAT..............................1915.000.004.001.000.000.00
..................................................................................TGACTAGACCCACACTCATTAA...........................2215.001.003.001.000.000.00
..................................................................................TGACTAGATCCACACTCATTAATC.........................2415.000.000.001.003.001.00
..................................................................................TGACTAGATCCACACTCTTT.............................2015.000.004.000.001.000.00
..................................................................................TGACTAGATGCACACTCATT.............................2015.000.005.000.000.000.00
....................................AGTGAGTGAGGGTCCAGTGTTTCC.......................................................................2415.004.001.000.000.000.00
..................................................................................TGACTAGATCCACATTCATT.............................2015.000.003.000.000.002.00
..................................................................................TGACTAGACCCACACTCAT..............................1915.000.004.001.000.000.00
..................................................................................TGACTAGATCCATACTCATT.............................2015.000.004.000.001.000.00
....................................AGTGAGTGAGGGTCCAGTGTTC.........................................................................2215.005.000.000.000.000.00
.....................................GTGAGTGAGGGTCCAGTGTT..........................................................................2015.005.000.000.000.000.00
..................................................................................TGACTAGAGCCACACTCATTA............................2114.000.002.002.000.000.00
..................................................................................TGACCAGATCCACACTCATT.............................2014.000.001.003.000.000.00
..................................................................................TGACTAGATCCTCACTCATT.............................2014.000.004.000.000.000.00
....................................AGTGAGTGAGGGTCCAGT.............................................................................1814.002.001.001.000.000.00
..................................................................................TGACTAGGTCCACACTCATT.............................2014.001.000.002.000.001.00
..................................................................................TGACTAGATCCACTCTCAT..............................1914.000.004.000.000.000.00
..................................................................................TGACTAGATCCACTCTCATT.............................2014.001.002.000.001.000.00
..................................................................................TGACTATATCCACACTCATTAA...........................2214.000.000.004.000.000.00
..................................................................................TGACTAGATCCACACTCCTTAA...........................2214.000.000.003.000.001.00
..................................................................................TGTCTAGATCCACACTCAT..............................1914.000.003.000.000.001.00
..................................................................................TGACTAGATACACACTCATTA............................2114.000.001.001.000.002.00
..................................................................................TGACTAGATCCACACTCGTTA............................2114.001.003.000.000.000.00
..................................................................................TGACTAGATCCGCACTCATT.............................2014.000.003.001.000.000.00
..................................................................................TGAATAGATCCACACTCATT.............................2014.000.004.000.000.000.00
..................................................................................TGACTAGATCCACACTCATCC............................2114.001.000.000.002.001.00


droMoj3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_6540:26447118-26447234 + 75.28
ACTGGAGCTGGAATTGGA-ATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTT-AGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
AC-GGTTCTG--ATCGGAAATACGTACTACTGTTTTTAGTGAGTGAGGGTCCAGTGTTTCACATTG-TTTGCTTAAGTATTTGTGACTAGATCCACACTCATTAAAAACGGTAGTTCAATC-----------
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
...................................................................................TGACTAGATCCACACTCATT.............................2016596.001064.002614.002200.00718.00
...................................................................................TGACTAGATCCACACTCAT..............................1913667.0039.001858.001358.00412.00
...................................................................................TGACTAGATCCACACTCATTA............................2112218.00465.00379.00296.001078.00
...................................................................................TGACTAGATCCACACTCATTAA...........................2211920.00246.00296.00147.001231.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCACA.....................................................................2611880.00709.0070.0039.001062.00
......................................GTGAGTGAGGGTCCAGTGTTTCACA.....................................................................2511253.00986.0056.0030.00181.00
...................................................................................TGACTAGATCCACACTCATTAAA..........................231457.0029.0033.0022.00373.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCA.......................................................................241440.00344.0046.0017.0033.00
......................................GTGAGTGAGGGTCCAGTGTTTCA.......................................................................231336.00299.0014.007.0016.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCAC......................................................................251315.00170.0068.0023.0054.00
...................................................................................TGACTAGATCCACACTCATTC............................211185.0087.0059.0037.002.00
...................................................................................TGACTAGATCCACACTCATC.............................201184.0059.0061.0062.002.00
...................................................................................TGACTAGATCCCCACTCATTAA...........................221176.000.004.008.00164.00
......................................GTGAGTGAGGGTCCAGTGTTTCAC......................................................................241163.00119.0015.0010.0019.00
...................................................................................TGACTAGATCCACACTCATTAT...........................221129.0020.0040.0022.0047.00
...................................................................................TGACTAGATCCACACTCATTT............................211122.0013.0049.0046.0014.00
.....................................AGTGAGTGAGGGTCCAGTGTTTC........................................................................23198.0058.0021.009.0010.00
...................................................................................TGACTAGATCCACACTCCTT.............................20165.000.005.0053.007.00
...................................................................................TGACTAGATCCACACTCCTTA............................21150.000.003.009.0038.00
...................................................................................TGACTAGATCCACACTCCT..............................19147.000.008.0030.009.00
...................................................................................TGACTAGATCCACACTCATTAAAA.........................24146.006.001.002.0037.00
......................................GTGAGTGAGGGTCCAGTGTTTC........................................................................22141.0036.003.001.001.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCACC.....................................................................26139.0023.001.000.0015.00
...............................................................TTG-TTTGCTTAAGTATTTG.................................................19138.001.000.000.0037.00
...................................................................................TGACTAGATCCACCCTCATTA............................21137.000.002.002.0033.00
...................................................................................TGACTAGATCCACACTCATTAAAAA........................25134.007.002.000.0025.00
...................................................................................TGACTAGATCCACACTCATTAAT..........................23133.006.001.001.0025.00
.....................................AGTGAGTGAGGGTCCAGTGTTT.........................................................................22129.0014.008.003.004.00
......................................GTGAGTGAGGGTCCAGTGTTTCACC.....................................................................25129.0019.002.005.003.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCACAA....................................................................27128.0023.000.002.003.00
...................................................................................TGACTAGATCCACACTCGTT.............................20126.000.0011.0013.002.00
...................................................................................TGACTAGATCCACACTCAGT.............................20125.000.0012.0013.000.00
...................................................................................TGACTAGATCCATACTCATT.............................20122.000.008.0013.001.00
...................................................................................TGACTAGATCCCCACTCATT.............................20121.000.002.0016.003.00
......................................GTGAGTGAGGGTCCAGTGTTT.........................................................................21121.0016.004.001.000.00
......................................GTGAGTGAGGGTCCAGTGTTTCACAA....................................................................26120.0015.003.000.002.00
...................................................................................TGACTAGATCCACACTCATTAC...........................22117.002.004.003.008.00
...................................................................................TGACTAGATCCCCACTCATTAAA..........................23117.000.000.000.0017.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCAA......................................................................25117.0014.001.001.001.00
...................................................................................TGACTAGATCCACACTCGT..............................19117.000.008.008.001.00
...................................................................................TGACTACATCCACACTCATT.............................20116.000.009.007.000.00
...................................................................................TGACTAGATCCACCCTCATT.............................20116.000.005.0011.000.00
...................................................................................CGACTAGATCCACACTCATT.............................20115.004.005.005.001.00
...................................................................................TGACTAGATCCACACTCATTCA...........................22115.001.002.004.008.00
...................................................................................TGACTAGATCCACACTCATTTT...........................22114.002.004.007.001.00
...................................................................................TGACTGGATCCACACTCATT.............................20114.001.006.006.001.00
...................................................................................TGAATAGATCCACACTCATT.............................20114.001.008.005.000.00
...................................................................................TGACTAGATCCATACTCAT..............................19114.000.005.009.000.00
...................................................................................TGACTAGGTCCACACTCAT..............................19113.000.005.006.002.00
...................................................................................TGACTAGATCCACACTCATTAAAT.........................24113.000.000.000.0013.00
...................................................................................TGGCTAGATCCACACTCATT.............................20113.000.006.006.001.00
...................................................................................TGACTAGATCCACACTCATTACA..........................23112.001.001.001.009.00
...................................................................................TGACTAGACCCACACTCATT.............................20112.002.008.002.000.00
.......................................TGAGTGAGGGTCCAGTGTTTCACA.....................................................................24111.005.001.001.004.00
.....................................AGTGAGTGAGGGTCCAGTGGTTCACA.....................................................................26111.000.000.000.0011.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCACT.....................................................................26111.004.001.001.005.00
...................................................................................CGACTAGATCCACACTCAT..............................19111.000.007.003.001.00
...................................................................................TGACTAGGTCCACACTCATT.............................20111.000.004.006.001.00
...................................................................................TGACTATATCCACACTCATT.............................20111.001.003.007.000.00
...................................................................................TGACTAGATCCCCACTCAT..............................19111.000.004.006.001.00
...................................................................................TGACTAGATCCACGCTCATT.............................20111.001.009.000.001.00
...................................................................................TGACTAGATCCACACTCATTTA...........................22110.000.000.004.006.00
...................................................................................TGACTAGATCCGCACTCATT.............................20110.001.002.001.006.00
.....................................AGTGAGTGAGGGTCCAGTGT...........................................................................20110.007.003.000.000.00
...................................................................................TGGCTAGATCCACACTCAT..............................19110.000.003.006.001.00
...................................................................................TGACTAGATCCACACTCATA.............................20110.000.002.000.008.00
...................................................................................CGACTAGATCCACACTCATTA............................21110.000.002.003.005.00
...................................................................................TAACTAGATCCACACTCATT.............................20110.001.002.006.001.00
...................................................................................TGACTAGAGCCACACTCAT..............................1919.000.005.004.000.00
...................................................................................TGACTAGATCCAAACTCATT.............................2019.000.004.004.001.00
...................................................................................AGACTAGATCCACACTCATT.............................2019.001.001.006.001.00
...................................................................................TGACTAGATCCACACTCAG..............................1919.000.007.001.001.00
.....................................AGTGAGTGAGGGTCCAGTGTTTCCCA.....................................................................2619.000.000.000.009.00
...................................................................................TGACTAGATCCACAATCATT.............................2019.000.005.002.002.00
...................................................................................TGATTAGATCCACACTCATT.............................2019.000.007.001.001.00
...................................................................................TGACTAGATCCCCACTCATTCA...........................2218.000.000.000.008.00
...................................................................................TGACTAGATCCATACTCATTA............................2118.002.003.001.002.00
...................................................................................TGACTCGATCCACACTCAT..............................1918.000.004.004.000.00
...................................................................................AGACTAGATCCACACTCAT..............................1918.000.005.002.001.00
...................................................................................TGACTAGATCCACACTCATTAG...........................2218.000.002.001.005.00
...................................................................................TGACTAGATCTACACTCAT..............................1918.000.003.005.000.00
...................................................................................TGACTAGATCCACACTCATG.............................2018.000.007.001.000.00
...................................................................................TGACTAGATCCCCACTCATTA............................2118.000.001.003.004.00
...................................................................................TGACTAGATCTACACTCATT.............................2018.001.003.002.002.00
.....................................AGTGAGTGAGGGTCCAGTGTT..........................................................................2118.004.003.000.001.00
...................................................................................TGACTCGATCCACACTCATT.............................2018.000.001.007.000.00
...................................................................................TGACTAGATCCACACTCACT.............................2018.001.003.003.001.00
...................................................................................TAACTAGATCCACACTCAT..............................1918.000.004.003.001.00
...................................................................................TGACTAGATCCACCCTCAT..............................1918.000.003.005.000.00
.....................................AGTGAGTGAGGGTCCAGCGTTTCACA.....................................................................2618.002.002.000.004.00
...................................................................................TGACTAGAGCCACACTCATT.............................2018.000.005.003.000.00
...................................................................................GGACTAGATCCACACTCATT.............................2017.003.002.002.000.00
...................................................................................TGACTAGCTCCACACTCATT.............................2017.000.003.004.000.00
...................................................................................TGACTAGATCCACCCTCCTTA............................2117.000.000.000.007.00
...................................................................................TGACTAGATCCACAATCAT..............................1917.000.003.003.001.00
...................................................................................TGACTAGATCCACACTCAC..............................1917.000.006.001.000.00
...................................................................................TGACTAGATCCACACTAATT.............................2017.000.004.003.000.00
...................................................................................TGACTAGATCCACACTCCTTAA...........................2217.000.000.000.007.00
...................................................................................AGACTAGATCCACACTCATTAA...........................2217.000.002.000.005.00
...................................................................................TGACTAGATCCACACTCTTT.............................2017.000.005.002.000.00
...................................................................................TGACTAGATCCACACCCATT.............................2017.000.002.004.001.00


droGri2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_14624:3249724-3249850 + 77.01
ACTGGAGCTGGAATT---GGA-ATTCATACTACTGTTTTTAGTGGGTGGGGGTCCAGTGTTTCACATTGATTTTCTTAGTATTTGTGACTAGATCCACACTCATTAATAACGGTAGTTCAATCATCAAGCACGT
ATAAGGGAAGTGATTTATGGATAACCGTATTACTGTTTTTAGTGGGTGAGGGTCCAGTGTTTCACATTG--TTTATTTGTATTTGTGACTAGATCCACACTCATTAAAAACGGTAGTTCAATCAACA-----GT
SizeHit CountTotal NormV109
Male body
.....................................................................................TGACTAGATCCACACTCATT.............................201383.00383.00
........................................AGTGGGTGAGGGTCCAGTGTTTCACA....................................................................261113.00113.00
.....................................................................................TGACTAGATCCACACTCATTA............................21190.0090.00
.....................................................................................TGACTAGATCCACACTCATTAA...........................22149.0049.00
........................................AGTGGGTGAGGGTCCAGTGTTTCA......................................................................24118.0018.00
.....................................................................................TGACTAGATCCACACTCCTT.............................2019.009.00
.....................................................................................TGACTAGATCCACACTCAT..............................1917.007.00
........................................AGTGGGTGAGGGTCCAGTGTTTCAC.....................................................................2515.005.00
.........................................GTGGGTGAGGGTCCAGTGTTTCACA....................................................................2515.005.00
.....................................................................................TGCCTAGATCCACACTCATT.............................2014.004.00
........................................AGTGGGTGAGGGTCCAGAGTTTCACA....................................................................2614.004.00
.....................................................................................TGACTAGACCCACACTCATT.............................2013.003.00
.....................................................................................TGACTAGAACCACACTCATTA............................2113.003.00
.....................................................................................TGACTAGATCCACACTCGTT.............................2013.003.00
........................................AGTGGGTGAGGGTCCAGTGTTT........................................................................2213.003.00
........................................AGTGGGTGAGGGTCCAGTGTTTCACAA...................................................................2713.003.00
.....................................................................................TGACTAGATCCACACTCTTT.............................2013.003.00
.....................................................................................TGTCTAGATCCACACTCATT.............................2013.003.00
........................................AGAGGGTGAGGGTCCAGTGTTTCACA....................................................................2612.002.00
........................................AGTGGGTGAGGGTCCAGTGTTTGACA....................................................................2612.002.00
........................................AGTGGGTGAGGGTCCAGTGTTTCACAT...................................................................2712.002.00
.....................................................................................TGACTACATCCACACTCATT.............................2012.002.00
.....................................................................................TGACTAGATCCACACTCGTTA............................2112.002.00
.....................................................................................TGACTAGAACCACACTCATT.............................2012.002.00
.....................................................................................TGGCTAGATCCACACTCATT.............................2012.002.00
.....................................................................................TGACTGGATCCACACTCATT.............................2012.002.00
........................................AGTGGGTGAGGGTCCAGTGT..........................................................................2012.002.00
.....................................................................................TGACTAAATCCACACTCATT.............................2012.002.00
.....................................................................................TGACTAGATCCACACTCATTAAAA.........................2411.001.00
.....................................................................................TGACTAGATCCACACTCATTAC...........................2211.001.00
........................................AGTGGGTGAGGGTCCAGCGTTTCAC.....................................................................2511.001.00
........................................AGTGGGCGAGGGTCCAGTGCTTCACA....................................................................2611.001.00
.....................................................................................TGACTAGATCxxCACTCATTA............................1911.001.00
........................................AGTGGGTGAGGGTCCAGTGTTTGA......................................................................2411.001.00
.....................................................................................TGACTAGATCCGCACTCATTT............................2111.001.00
.....................................................................................TGACTCGATCCACACTCATTA............................2111.001.00
.....................................................................................TGACTATATCCACACTCATT.............................2011.001.00
.....................................................................................TGTCTAGATCCACACTCATTA............................2111.001.00
.....................................................................................TGCCTAGATCCACACTCATTAA...........................2211.001.00
........................................AGTGGGTGAGGGTCCAGTGCTTCA......................................................................2411.001.00
.........................................GTGGGTGAGGGTCCAGTGTTTCACT....................................................................2511.001.00
........................................ACTGGGTGAGGGTCCAGTGTTTCACA....................................................................2611.001.00
.....................................................................................TGACTAGCTCCACACTCATT.............................2011.001.00
.....................................................................................CGACTAGATCCACACTCATT.............................2011.001.00
........................................AGTGGGTGAGGGTCCACTGTTTCACA....................................................................2611.001.00
.....................................................................................TGACTAGATCCACACTCCTTAA...........................2211.001.00
.....................................................................................TGACTAGATCCACACTCATTAAA..........................2311.001.00
........................................AGTGGGTGAGGGTCCAGTGTTTC.......................................................................2311.001.00
........................................AGTGAGTGAGGGTCCAGTGTTTCAC.....................................................................2511.001.00
........................................AGTGGGTGAGGGTCCAGTG...........................................................................1911.001.00
.....................................................................................TGACTAGATCCACACTCATTTA...........................2211.001.00
.........................................GTGAGTGAGGGTCCAGTGTTTCACA....................................................................2511.001.00
.........................................GTGAGTGAGGGTCCAGTGTTTCAC.....................................................................2411.001.00
.....................................................................................TGACTAGAGCCACACTCATTAA...........................2211.001.00
.....................................................................................TGACTAGATCCAAACTCATT.............................2011.001.00
.....................................................................................TGACTAGATCCACACTCATTT............................2111.001.00
.........................................GTGGGTGAGGGTCCAGTATTTCACA....................................................................2511.001.00
.........................................GTGGGTGAGGGTCCAGTGTTTCA......................................................................2311.001.00
........................................AGTGGGTGGGGGTCCAGTGTTTCACA....................................................................2611.001.00
.....................................................................................TGACTAGATCCACACTCATTAT...........................2211.001.00
.....................................................................................TGACTAGATACACACTCATT.............................2011.001.00
........................................AGTGGGTGAGGGTCCAGCGTTTCACA....................................................................2611.001.00
........................................ACTGGGTGAGGGTCCAGTGT..........................................................................2011.001.00
.....................................................................................TGACTAGATCCACACTATT..............................1911.001.00
........................................AGTGGGTGAGGGTCCAGGGTTTCACA....................................................................2611.001.00
........................................AGTGGGTGAGGGTCCAGTCTTTCACA....................................................................2611.001.00
.....................................................................................TGACTAGATCCACACTCATTAAT..........................2311.001.00
.....................................................................................TGACTGGATCCACACTCATTAA...........................2211.001.00
........................................AGTGGGTGAGGGTCCAGAGTTTCA......................................................................2411.001.00
........................................CGTGGGTGTGGGTCCAGTGTTTCACA....................................................................2611.001.00
.....................................................................................TGACTAGATCCACACTCATTC............................2111.001.00
.....................................................................................TGACTAGATCCACACTCA...............................1811.001.00
........................................AGTGGGTGACGGTCCAGTGTTTCACA....................................................................2611.001.00
........................................AGTGGGTGAGGGTCCAGTGTTTTACA....................................................................2611.001.00
.....................................................................................TGACTAGATCCACCCTCATT.............................2011.001.00
.....................................................................................TGACTACATCCACACTCATTA............................2111.001.00
........................................AGTGGGTGCGGGTCCAGTGTTTCAC.....................................................................2511.001.00
.....................................................................................TGACTAGACCCACACTCATTAA...........................2211.001.00
........................................AGTGGGTGAGGGTCCAGTA...........................................................................1911.001.00
.....................................................................................TGAATAGATCCACACTCATT.............................2011.001.00
........................................AGTGAGTGAGGGTCCAGAGTTTCA......................................................................2411.001.00
........................................AGTGGGTGAGGGTCCAGTGTTTTT......................................................................2411.001.00


Generated: 04/20/2012 at 05:16:34 EDT