Possible Orthologs for dme-mir-276b-as

droSim1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:9702897-9703022 -	94.6	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTCAACTATATGATGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAAT--AGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTT-TTTCGGTCGATGGTC Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .......................................................................TAGGAACTTCATACCTCG........................................ 18 12 0.17 0.00 0.17 0.00 0.00 ..............................................................................................................GTT-TTTCGGTCGATCGTC 18 2 0.50 0.00 0.50 0.00 0.00 .......................................................................TAAGAACTCTATACCTAG........................................ 18 8 0.13 0.00 0.13 0.00 0.00
3	chr3L:9748000-9748088 -	58.4	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC ------------GTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V044 Embryo M023 Head M024 Male body M025 Embryo .......................................................................TAGGAACTTCATACCTCG........................................ 18 12 0.17 0.00 0.17 0.00 0.00 ...............GTTTTTTGGTCTTTCGAG................................................................................................ 18 4 0.25 0.00 0.00 0.00 0.25 .......................................................................TAAGAACTCTATACCTAG........................................ 18 8 0.13 0.00 0.13 0.00 0.00

droSec1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:2526747-2526871 -	93.85	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTCAACTATATGATGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAA--TAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTT-TTTCGTTCG-TGGTC Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .................................AGCGCGGTATAAAGTTCCTACG.......................................................................... 22 16 0.31 0.19 0.00 0.13 .............................................................................CTCTATACCTCGCTGATGGCA............................... 21 8 0.13 0.00 0.00 0.13 .................................AGCGCGGTATTGAGTTCCTACG.......................................................................... 22 12 0.08 0.00 0.00 0.08 .................................AGCGCGGTATCAAGTTCCTACG.......................................................................... 22 8 0.13 0.00 0.00 0.13 .................................AGCGAGGTATTAAGTTCCT............................................................................. 19 12 0.08 0.00 0.00 0.08 .................................AGCAAGGTATAAAGTTCCTACG.......................................................................... 22 16 0.06 0.00 0.00 0.06 .................................AGCACGGTATAGAGTTCCTACG.......................................................................... 22 16 0.06 0.00 0.00 0.06
2	super_0:2571171-2571259 -	58.4	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC ------------GTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head .................................AGCGCGGTATAAAGTTCCTACG.......................................................................... 22 16 0.31 0.19 0.00 0.13 .................................AGCGCGGTATGGAGTTCCTACG.......................................................................... 22 12 0.17 0.00 0.08 0.08 .................................AGCAAGGTATAAAGTTCCTACG.......................................................................... 22 16 0.06 0.00 0.00 0.06 .............................................................................CTCTATACCTCGCTGATGGCA............................... 21 8 0.13 0.00 0.00 0.13 .................................AGCAAGGTATGGAGTTCCTACG.......................................................................... 22 12 0.08 0.00 0.00 0.08 .................................AGCACGGTATAGAGTTCCTACG.......................................................................... 22 16 0.06 0.00 0.00 0.06 .................................AGCGCGGTATCAAGTTCCTACG.......................................................................... 22 8 0.13 0.00 0.00 0.13

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:10302128-10302256 -	90.93	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTT--TTCGTTCGATGGTC TTTTAACTTTATGATGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAA--TAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTGTTCTTTCTGTTGTC Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .................................AGCGCGGTATAAAGTTCCTACG............................................................................ 22 16 0.25 0.19 0.00 0.00 0.06 0.00 .......................................................................TAGGAACTTCATACCTCGCT........................................ 20 12 0.08 0.00 0.00 0.00 0.08 0.00 .......................................................................TAGGAACTTCATACCTCG.......................................... 18 12 0.08 0.00 0.00 0.00 0.08 0.00 .......................................................................TAGGAACTTTATACCGCGCT........................................ 20 16 0.06 0.00 0.00 0.00 0.06 0.00 .................................AGCGCGGTATTGAGTTCCTACG............................................................................ 22 12 0.08 0.08 0.00 0.00 0.00 0.00 .................................AGCGCGGTATTAAGTTCCTACG............................................................................ 22 8 0.13 0.00 0.00 0.00 0.13 0.00 .................................AGCAAGGTATAAAGTTCCTACG............................................................................ 22 16 0.06 0.00 0.00 0.00 0.06 0.00 .................................AGCACGGTATAGAGTTCCTACG............................................................................ 22 16 0.06 0.00 0.00 0.00 0.06 0.00 .......................................................................TAGGAACTGTATACCGCGCT........................................ 20 8 0.13 0.00 0.13 0.00 0.00 0.00
2	chr3L:10348891-10348979 -	58.4	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC ------------GTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head .................................AGCGCGGTATAAAGTTCCTACG.......................................................................... 22 16 0.25 0.19 0.00 0.00 0.06 0.00 .................................AGCGCGGTATGGAGTTCCTACG.......................................................................... 22 12 0.25 0.08 0.00 0.00 0.17 0.00 .......................................................................TAGGAACTTCATACCTCG........................................ 18 12 0.08 0.00 0.00 0.00 0.08 0.00 .................................AGCAAGGTATAAAGTTCCTACG.......................................................................... 22 16 0.06 0.00 0.00 0.00 0.06 0.00 .................................AGCAAGGTATGGAGTTCCTACG.......................................................................... 22 12 0.08 0.00 0.00 0.00 0.08 0.00 .................................AGCACGGTATAGAGTTCCTACG.......................................................................... 22 16 0.06 0.00 0.00 0.00 0.06 0.00 .......................................................................TAGGAACTTTATACCGCGCT...................................... 20 16 0.06 0.00 0.00 0.00 0.06 0.00 .................................AGCGAGGTATGAAGTTCCTACG.......................................................................... 22 12 0.08 0.00 0.00 0.00 0.08 0.00 .................................AGCGCGGTATGCAGTTCCTACG.......................................................................... 22 4 0.25 0.25 0.00 0.00 0.00 0.00 .......................................................................TAGGAACTTCATACCTCGCT...................................... 20 12 0.08 0.00 0.00 0.00 0.08 0.00 .................................AGCGCGGTATTAAGTTCCTACG.......................................................................... 22 8 0.13 0.00 0.00 0.00 0.13 0.00 .......................................................................TAGGAACTGTATACCGCGCT...................................... 20 8 0.13 0.00 0.13 0.00 0.00 0.00

droEre2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4784:10306167-10306292 -	92.29	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTCAACTTTATGATGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAA--TAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTA-TTCGGTTGTC Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .......................................................................TAGGAACTTTATACCTCGCTCA.................................... 22 8 0.13 0.00 0.13 0.00 0.00 .................................AGCACGGTATAAAGTTCCTCCG.......................................................................... 22 8 0.13 0.13 0.00 0.00 0.00 .................................AGCGCGGTATCAAGTTCCTACG.......................................................................... 22 8 0.13 0.13 0.00 0.00 0.00 .......................................................................TAGGAACTTCATACCTCGCTG..................................... 21 8 0.13 0.00 0.13 0.00 0.00
2	scaffold_4784:10353141-10353229 -	58.4	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC ------------GTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head .................................AGCACGGTATAAAGTTCCTCCG.......................................................................... 22 8 0.13 0.13 0.00 0.00 0.00 .................................AGCGCGGTATCAAGTTCCTACG.......................................................................... 22 8 0.13 0.13 0.00 0.00 0.00 .......................................................................TAGGAACTTCATACCTCGCTG..................................... 21 8 0.13 0.00 0.13 0.00 0.00 .......................................................................TAGGAACTTTATACCTCGCTCA.................................... 22 8 0.13 0.00 0.13 0.00 0.00

droFic1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000453841:740991-741120 +	82.15	TTT--TAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTT----TTTCGTTCGATGGTC TTTAGTTTTTATTTGATGGACGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATTT--GAACGTAGGAACTCTATACCTCGCTTATGGTAAAAAGGCTTCGGATTTGGGGTTTC---TGATGGTC Size Hit Count Total Norm
1	scf7180000453841:693852-693964 +	65.56	TTTT--------------AACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTTGGGATTTTAGCATTTACT--TTGTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm

droEug1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000409711:2174289-2174430 -	71.43	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTT---------------TCGTTCGATGGTC TTTAAACTTTACGATGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTAAA--TAGAAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGGCTTCGGTATTTTCTTTGTTTTTCTTGGCCCTTCGATGGAC Size Hit Count Total Norm
3	scf7180000409711:2221473-2221574 -	63.94	TTTTAACTA-TATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTGCATTTAGTTTGTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm

droBia1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000302428:7436352-7436478 +	89.92	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTCAAGTTTTGGATGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAAT--AGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTGTATTCGACGGTC Size Hit Count Total Norm
2	scf7180000302428:7389641-7389742 +	63.94	TTTTAACTAT-ATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTGCATTTACTTTGTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm

droTak1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000415209:361628-361756 -	90.18	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTT--TTTTTCGTTCGATGGTC TTTCAACTTTATGATGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACGGAA--TAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGGCTTCGGTTATTTCTTCGTTCGATGGTC Size Hit Count Total Norm
1	scf7180000415515:147716-147805 +	59.18	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC T-----------GTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm

droEle1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scf7180000490564:1145980-1146108 -	86.43	TTTTAA--CTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TGTTAATTCTTTATGTTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGATTAAA--TGGGAACGTAGGAACTCTATACCTCGCTGATGGTATAAAGACTTCGGTTTTCTGCTTTGAATGGTC Size Hit Count Total Norm
2	scf7180000490048:90-218 -	86.43	TTTTAA--CTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TGTTAATTCTTTATGTTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGATTAAA--TGGGAACGTAGGAACTCTATACCTCGCTGATGGTATAAAGACTTCGGTTTTCTGCTTTGAATGGTC Size Hit Count Total Norm
5	scf7180000490564:1195780-1195862 -	48.05	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTT------------------GGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm

droRho1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000780105:56692-56817 +	89.21	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TGTAAACTTTATGTTGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAA--TAGGAACGTAGGAACTCTATACCTCGCTGATGGTAA-AAGACTTCGGATTTTTGGTTTCAATGGTC Size Hit Count Total Norm
4	scf7180000778277:12913-13016 -	63.95	TTTTA--ACTAT-ATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTTGCATTTACTTCGTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATA-ATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm
1	scf7180000780105:56249-56382 +	44.68	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGA-----ATATAGGAACGTAGGAACTCTATACCTCGCT--GATGGTAAAAAG----ACTTCGGTTTTTTTCGTTCGATGGTC TCTCAAATATACATATTTTTTAAATTCTTCATGACAATATTAATAT------ACGGCTTATAGCCATTAAGTTGAGCATGAATTCTTTAATTAATCCAAATAGCAAAGGGTTGATTTTTGAAAACTTTAATTTAATGTTA Size Hit Count Total Norm

droKik1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	scf7180000302334:94650-94789 +	71.41	TTTTA--------ACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCG----TTCGATGGTC CTCTATAATAAACACTTTATGTTGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACT-ATTTGAGGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAAGGCTTCGTTTGTTTTTGGCTTTTCAGTCTTC Size Hit Count Total Norm
2	scf7180000302334:37016-37181 +	41.53	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAAT-ATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAA------------AAGACTTCGG------------------TTTTTTTCGTTC---------------GATGGTC TT---------TGTTGTTTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATAATGTGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAACCAGGTAAAAAATATCTCGGCAGCGGGTTTGCCTTATTTTTTTTTCTTTTTCACAAAACTTGAACAACAACC Size Hit Count Total Norm

droAna3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scaffold_13337:15233368-15233487 -	70.69	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATA---GGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC CTTT-----CATGATGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTA-GTTTAAGTGGCACGTAGGAACTCTATACCTCGCTGATGGCAAATAGGCTTCGGTTTCTTCAGA--AAT---- Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .................................AGCGCGGTATAAAGTTCCTACG............................................................................. 22 16 0.25 0.00 0.00 0.25 0.00 .....................................................................................................ATTAGGCTTCGGTTTGTT............. 18 2 1.00 0.00 0.00 1.00 0.00 .................................AGCACGGTATAGAGTTCCTACG............................................................................. 22 16 0.13 0.00 0.06 0.06 0.00 .................................AGCGCGGTATTGAGTTCCTACG............................................................................. 22 12 0.17 0.08 0.00 0.08 0.00 ..........................................................................TAGGAACTCCATACCTCGCTC..................................... 21 8 0.13 0.00 0.00 0.13 0.00 .....................................................................................................ATTAGACTTCGGTTTCTT............. 18 2 0.50 0.00 0.00 0.00 0.50 .................................AGCACGGTATACAGTTCCTACG............................................................................. 22 8 0.13 0.00 0.00 0.13 0.00 .................................AGCATGGTATAAAGTTCCTACG............................................................................. 22 8 0.13 0.00 0.00 0.13 0.00 .................................AGCACGGTATAAAGTTCCTACG............................................................................. 22 8 0.13 0.00 0.00 0.13 0.00 ..........................................................................TAGGAACTTAATACCTCGCT...................................... 20 12 0.08 0.00 0.00 0.08 0.00 ..........................................................................TAGGAACTTTATACCGCGCT...................................... 20 16 0.06 0.00 0.00 0.06 0.00
4	scaffold_13337:15274258-15274364 -	62.99	TTTTAACTATATGCTGGTCGAC----AGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATA-TAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TCCGCTTTATGTTTTCGTTGATTTTAGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATAATGTTAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo .....................................AGCGCGGTATAAAGTTCCTACG........................................................................... 22 16 0.25 0.00 0.00 0.25 0.00 .....................................AGCGAGGTATGAAGTTCCTACG........................................................................... 22 12 0.17 0.00 0.17 0.00 0.00 .....................................AGCACGGTATAGAGTTCCTACG........................................................................... 22 16 0.13 0.00 0.06 0.06 0.00 ............................................................................TAGGAACTTAATACCTCGCT...................................... 20 12 0.08 0.00 0.00 0.08 0.00 .....................................AGCACGGTATAAAGTTCCTACG........................................................................... 22 8 0.13 0.00 0.00 0.13 0.00 .....................................AGCATGGTATAAAGTTCCTACG........................................................................... 22 8 0.13 0.00 0.00 0.13 0.00 ............................................................................TAGGAACTCCATACCTCGCTC..................................... 21 8 0.13 0.00 0.00 0.13 0.00 .....................................AGCGTGGTATGAAGTTCCTACG........................................................................... 22 4 0.25 0.00 0.00 0.25 0.00 .....................................AGCGCGGTATGGAGTTCCTACG........................................................................... 22 12 0.08 0.00 0.00 0.08 0.00 ............................................................................TAGGAACTTTATACCGCGCT...................................... 20 16 0.06 0.00 0.00 0.06 0.00 .....................................AGCACGGTATACAGTTCCTACG........................................................................... 22 8 0.13 0.00 0.00 0.13 0.00

droBip1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000395933:88091-88219 -	76.82	TTTTAACTATAT-GCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATA--GGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC GAAAGACTTTCTCGATGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTAGTTAAAGTGGCACGTAGGAACTCTATACCTCGCTGATGGTAAATAGGCTTCGGTTTCTTA---TAGAATCTT Size Hit Count Total Norm
4	scf7180000395933:129294-129391 -	62.2	TTTTAACTATATGCTGGTCGAC----AGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATA-TAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC T---------ATGTTCGTTGATTTTAGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATAATGTTAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm

dp4 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chrXR_group6:8706030-8706135 -	65.07	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACT--GAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC ------------GTTGATGGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTTTGGATAC-GGCACGTAGGAACTCTATACCTCGCTGATGGTAAAGAGGCTTCGCTTT--------AGAT---- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .........................................................................TTGAAACTCTATACCTCGCTGA.................................... 22 8 0.13 0.00 0.13 0.00 0.00
4	chrXR_group6:8756413-8756518 -	64.57	TTTTAACTATAT---GCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAAT-ATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTTGTTTGTTTTTCGTTGTCTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATAATATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body .......................................................ACGAGTTTATTATATAAAC........................................................... 19 4 0.25 0.00 0.00 0.25 0.00 ...........................................................................TTGAAACTCTATACCTCGCTGA.................................... 22 8 0.13 0.00 0.13 0.00 0.00

droPer1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
4	super_27:1146105-1146210 -	65.07	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACT--GAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC ------------GTTGATGGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTTTGGATAC-GGCACGTAGGAACTCTATACCTCGCTGATGGTAAAGAGGCTTCGCTTT--------AGAT---- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo .................................AGCACGGTATAGAGTTCCTACG............................................................................ 22 16 0.19 0.00 0.00 0.00 0.19 0.00 .................................AGCGCGGTATTGAGTTCCTACG............................................................................ 22 12 0.17 0.00 0.00 0.00 0.17 0.00 .................................AGCGCGGTATAAAGTTCCTACG............................................................................ 22 16 0.13 0.00 0.00 0.00 0.13 0.00 .................................AGCACGGTATAGAGTTCCT............................................................................... 19 16 0.06 0.00 0.00 0.00 0.06 0.00 .........................................................................TAGGAACTATATACCGCGCTG..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00 .........................................................................TAGGAACTCCATACCTCGCTC..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00 .........................................................................AAGGAGCTCTATACCTCGCTG..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00 .........................................................................TAGGAACTTCATACCTCGCT...................................... 20 12 0.08 0.00 0.00 0.00 0.08 0.00 .................................AGCACGGTATAAAGTTCCT............................................................................... 19 8 0.13 0.00 0.00 0.00 0.13 0.00 .................................AGCACGGTxTTAACTTCCTA.............................................................................. 19 4 0.25 0.00 0.00 0.00 0.25 0.00 .........................................................................TAGGAACTTTATACCTCGCTC..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00 .................................AGCACGGTATCGAGTTCCTACG............................................................................ 22 8 0.13 0.00 0.00 0.00 0.13 0.00 .........................................................................TAGGAACTTTAGACCTCGCTGA.................................... 22 8 0.13 0.00 0.00 0.13 0.00 0.00
6	super_27:1191225-1191330 -	64.57	TTTTAACTATATGCTGGTCGA-------CAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAAT-ATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC TTTT----GTATGTTTTTCGTTGTCTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTTTATAATATGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo ........................................AGCACGGTATAGAGTTCCTACG........................................................................... 22 16 0.19 0.00 0.00 0.00 0.19 0.00 ........................................AGCGCGGTATAAAGTTCCTACG........................................................................... 22 16 0.13 0.00 0.00 0.00 0.13 0.00 ...............................................................................TAGGAACTTCATACCTCGCT...................................... 20 12 0.08 0.00 0.00 0.00 0.08 0.00 ...............................................................................TAGGAACTATATACCGCGCTG..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00 ........................................AGCACGGTATCGAGTTCCTACG........................................................................... 22 8 0.13 0.00 0.00 0.00 0.13 0.00 ...............................................................................TAGGAACTTTAGACCTCGCTGA.................................... 22 8 0.13 0.00 0.00 0.13 0.00 0.00 ...............................................................................AAGGAGCTCTATACCTCGCTG..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00 ...............................................................................TAGGAACTCCATACCTCGCTC..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00 ........................................AGCGCGGTATGGAGTTCCTACG........................................................................... 22 12 0.08 0.00 0.00 0.08 0.00 0.00 ........................................AGCGAGGTATGAAGTTCCTACG........................................................................... 22 12 0.08 0.00 0.00 0.00 0.08 0.00 ........................................AGCACGGTATAGAGTTCCT.............................................................................. 19 16 0.06 0.00 0.00 0.00 0.06 0.00 ........................................AGCACGGTATAAAGTTCCT.............................................................................. 19 8 0.13 0.00 0.00 0.00 0.13 0.00 ...............................................................................TAGGAACTTTATACCTCGCTC..................................... 21 8 0.13 0.00 0.00 0.00 0.13 0.00

droWil1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_181024:290397-290516 +	67.24	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACT---GAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGA--TGGTC TT---------TGTTGTTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGATTATTGCA-ATTTGCACGTAGGAACTCTATACCTCGCTTATGGTAAATAGGCTTCGTTTATT-----TCAAATTTGTT Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head .................................AGCGCGGTATAAAGTTCCTACG............................................................................... 22 12 0.83 0.00 0.08 0.75 0.00 .................................AGCACGGTATAGAGTTCCTACG............................................................................... 22 12 0.42 0.00 0.00 0.42 0.00 .................................AGCAAGGTATAAAGTTCCTACG............................................................................... 22 12 0.17 0.00 0.00 0.17 0.00 .................................AGCGCGGTATTGAGTTCCTACG............................................................................... 22 10 0.10 0.00 0.00 0.10 0.00 ..........................................................................TAGGAACTTAATACCTCG.......................................... 18 10 0.10 0.00 0.00 0.00 0.10

droVir3 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13049:16093198-16093326 -	76.82	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAA--TATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCG-ATGGTC TCTTTTCT---TGCTGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGATTATTGCAATTTGCACGTAGGAACTCTATACCTCGCTGATGGTATATAGACTTCGGTATCTTTAAATCTTAAGATA Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head .................................AGCGCGGTATTGAGTTCCTACG............................................................................. 22 12 0.17 0.00 0.17 0.00 0.00 0.00 .................................AGCACGGTATAGAGTTCCTACG............................................................................. 22 16 0.06 0.00 0.06 0.00 0.00 0.00 .................................AGCGCGGTATAAAGTTCCTACG............................................................................. 22 16 0.06 0.00 0.06 0.00 0.00 0.00 .........................................................................TAGGAACTTTATACCTxGCTGAT.................................... 22 8 0.13 0.00 0.13 0.00 0.00 0.00
4	scaffold_13049:16143991-16144086 -	57.24	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATA-GGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC ACTTCGTTGTTTTTT-------GGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTATATAAATTGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head .................................AGCGCGGTATAAAGTTCCTACG........................................................................... 22 16 0.06 0.00 0.06 0.00 0.00 0.00 .................................AGCACGGTATAGAGTTCCTACG........................................................................... 22 16 0.06 0.00 0.06 0.00 0.00 0.00 ........................................................................TAGGAACTTTATACCTxGCTGAT................................... 22 8 0.13 0.00 0.13 0.00 0.00 0.00

droMoj3 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	scaffold_6680:20678203-20678343 +	67.71	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGA---ATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTT-CGTTCG---------ATGGTC TTTATTCGTTTTGTTGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGACTATTGCA-ATTTGCACGTAGGAACTCTATACCTCGCTGATGGTATATAGACTTCGTTATCTTTACAATCTCTGTTTCACTTGGTC Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo .................................AGCGCGGTATAAAGTTCCTACG....................................................................................... 22 16 0.31 0.00 0.19 0.13 0.00 ..........................................................................TAGGAACTTCATACCTCGCT................................................ 20 12 0.17 0.00 0.17 0.00 0.00 ..........................................................................TAGGAACTCCATACCGCGCTG............................................... 21 8 0.13 0.00 0.00 0.13 0.00 .................................AGCAAGGTATAAAGTTCCT.......................................................................................... 19 16 0.06 0.00 0.06 0.00 0.00 ........TTTTGTTGGACGCCAGCC.................................................................................................................... 18 4 0.25 0.25 0.00 0.00 0.00 .................................AGCACGGTTTAAAGTTCCT.......................................................................................... 19 8 0.13 0.00 0.00 0.00 0.13
1	scaffold_6680:20621820-20621922 +	61.42	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATA-GGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCGTTCGATGGTC GTTTTTGTTTGAGTTGTGTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTACGAGTATTTAAATTGAACGTAGGAACTCTATACCTCGCTGATGGCAAAAA--------------------------- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo .................................AGCGCGGTATAAAGTTCCTACG........................................................................... 22 16 0.31 0.00 0.19 0.13 0.00 ........................................................................TAGGAACTTCATACCTCGCT...................................... 20 12 0.17 0.00 0.17 0.00 0.00 ..........GAGTTGTGTTTTGGCATT...................................................................................................... 18 4 0.25 0.00 0.25 0.00 0.00 ........................................................................TAGGAACTCCATACCGCGCTG..................................... 21 8 0.13 0.00 0.00 0.13 0.00 ...TTTGTTTxAGTTGTGTTTTGC.......................................................................................................... 20 4 0.25 0.25 0.00 0.00 0.00 .................................AGCGCGGTATGGAGTTCCTACG........................................................................... 22 12 0.08 0.00 0.00 0.08 0.00 .................................AGCAAGGTATAAAGTTCCT.............................................................................. 19 16 0.06 0.00 0.06 0.00 0.00 .................................AGCGAGGTATGAAGTTCCTAC............................................................................ 21 12 0.08 0.00 0.00 0.08 0.00 ..................................GCGCGGTATGGAGTTCCTACG........................................................................... 21 12 0.08 0.00 0.00 0.08 0.00 .................................AGCACGGTTTAAAGTTCCT.............................................................................. 19 8 0.13 0.00 0.00 0.00 0.13
8	scaffold_6540:9289835-9289963 -	45.84	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGA-CTTCGGTTTTTTTCGTTCGATGGTC TAATAATTATAAAATTTTAAAAACCTC-TTAAAAGTAAGTCAAAAACTTAAGCAAACTTGATGTTAAATTTTAAAAACCATATAATTAAATTCTGATAAAATGTTAATTAAATTAATTAAATACATACAT Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ............................................AACTTAAGCAAACTTGGTC................................................................... 19 2 0.50 0.50 0.00 0.00 0.00

droGri2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
3	scaffold_15110:12572308-12572448 +	67.71	TTTTAACTAT--------ATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACT---GAATATAGGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAAGACTTCGGTTTTTTTCG--TTCGATGGTC ACTTAATTGTTTTGATCAATGCTGGTCGACAGCCCTCCAAGAGCACGGTATTAAGTTCCTACGATTATTGCA-ATTTGCACGTAGGAACTCTATACCTCGCTAATGGTAAATAGACTTCGTTATCTTTCGGTTTTGAGATTT Size Hit Count Total Norm V109 Male body
1	scaffold_15110:12521927-12522060 +	59.15	TTTTAACTATATGCTGGTCGACAGTCCTCCAAGAGCACGGTATTAAGTTCCTACGACTGAATATA-GGAACGTAGGAACTCTATACCTCGCTGATGGTAAAAA----------GACTTCGGTTTTTTTCGT-TCGATGGTC TTTC-----TTTGTTGTGTTTTGGTCTTCCAAGAGCACGGTATGAAGTTCCTATGAGTATTTAAATTTAACGTAGGAACTCTATACCTCGCTGATGGCAAAAACCAGGTAGCATATTTTTGAATTCTTCTTTTTGA--GCA Size Hit Count Total Norm V109 Male body

Generated: 04/20/2012 at 05:18:04 EDT