Possible Orthologs for dme-mir-274

droSim1 - 1 hit found

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	super_0:3837012-3837141 +	90.13	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG AGTTTTAGTGACAAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGATCACCAGGATTACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAACGCAACAAATATA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..................................TTTGTGACCGACACTAACGGGT.......................................................................... 22 1 133987.00 11661.00 141.00 122185.00 ..................................TTTGTGACCGACACTAACGGGTA......................................................................... 23 1 12655.00 666.00 22.00 11967.00 ..................................TTTGTGACCGACACTAACGGGA.......................................................................... 22 1 1724.00 152.00 0.00 1572.00 ..................................TTTGTGACCGACACTAACGGGTAT........................................................................ 24 1 1616.00 210.00 3.00 1403.00 ..................................TTTGTGACCGACACTAACGGGTAA........................................................................ 24 1 1481.00 75.00 5.00 1401.00 ..................................TTTGTGACCGACACTAACGGG........................................................................... 21 1 846.00 34.00 3.00 809.00 ..................................TTTGTGACCGACACTAACGGGC.......................................................................... 22 1 653.00 52.00 0.00 601.00 ..................................TTTGTGACCGACACTAACGG............................................................................ 20 1 589.00 25.00 1.00 563.00 ..................................TTTGTGACCGACACTAACG............................................................................. 19 1 423.00 0.00 0.00 423.00 ...................................TTGTGACCGACACTAACGGGT.......................................................................... 21 1 418.00 23.00 0.00 395.00 ..................................TTTGTGACCGACACTAACTGGT.......................................................................... 22 1 320.00 65.00 1.00 254.00 ..................................TTTGTGACCGACACTAACGGGTT......................................................................... 23 1 297.00 26.00 0.00 271.00 ..................................TTTGTGACCGACACTAACGGT........................................................................... 21 1 265.00 6.00 1.00 258.00 ..................................TTTGTGACCGACACTAACAGGT.......................................................................... 22 1 264.00 84.00 0.00 180.00 ..................................TTTGTGACCGACACTAACGGGG.......................................................................... 22 1 262.00 19.00 0.00 243.00 ..................................TTTGTGACCTACACTAACGGGT.......................................................................... 22 1 244.00 9.00 0.00 235.00 ..................................TTTGTTACCGACACTAACGGGT.......................................................................... 22 1 228.00 13.00 0.00 215.00 ..................................TTTGTGACCAACACTAACGGGT.......................................................................... 22 1 221.00 10.00 0.00 211.00 ..................................TTTGTGACCGACACTAACCGGT.......................................................................... 22 1 188.00 97.00 0.00 91.00 ..................................CTTGTGACCGACACTAACGGGT.......................................................................... 22 1 179.00 9.00 0.00 170.00 ..................................TTTTTGACCGACACTAACGGGT.......................................................................... 22 1 166.00 8.00 0.00 158.00 ..................................TTTGTGAACGACACTAACGGGT.......................................................................... 22 1 165.00 1.00 0.00 164.00 .................................CTTTGTGACCGACACTAACGGGT.......................................................................... 23 1 155.00 5.00 0.00 150.00 ..................................TTTGTGACAGACACTAACGGGT.......................................................................... 22 1 143.00 3.00 0.00 140.00 ..................................TTTGTGACTGACACTAACGGGT.......................................................................... 22 1 138.00 10.00 0.00 128.00 ..................................TTTGTGGCCGACACTAACGGGT.......................................................................... 22 1 135.00 11.00 0.00 124.00 ..................................TTTGTGACCGACACTAACGAGT.......................................................................... 22 1 130.00 9.00 0.00 121.00 ..................................TTTGTGACCCACACTAACGGGT.......................................................................... 22 1 128.00 9.00 0.00 119.00 ..................................TTTGTAACCGACACTAACGGGT.......................................................................... 22 1 127.00 7.00 0.00 120.00 ..................................TTTGTGACCGACACTAAAGGGT.......................................................................... 22 1 121.00 4.00 0.00 117.00 ..................................TTTGCGACCGACACTAACGGGT.......................................................................... 22 1 118.00 13.00 0.00 105.00 ..................................TTTGTGACCGACACTAACGTGT.......................................................................... 22 1 112.00 7.00 0.00 105.00 ..................................TTTGTCACCGACACTAACGGGT.......................................................................... 22 1 110.00 9.00 0.00 101.00 ..................................TTTGTGACCGACACTAACGCGT.......................................................................... 22 1 108.00 10.00 0.00 98.00 ..................................TTCGTGACCGACACTAACGGGT.......................................................................... 22 1 104.00 9.00 0.00 95.00 ....................................TTTGACCGACACTAACGGGT.......................................................................... 20 1 104.00 9.00 0.00 95.00 ..................................TTTGTGACCGACACTAACGGGTTT........................................................................ 24 1 101.00 20.00 0.00 81.00 ..................................TTTGTGACCGACACTAATGGGT.......................................................................... 22 1 101.00 9.00 0.00 92.00 ..................................TTTATGACCGACACTAACGGGT.......................................................................... 22 1 100.00 5.00 0.00 95.00 ..................................TTTGTGACCGACGCTAACGGGT.......................................................................... 22 1 100.00 9.00 0.00 91.00 ..................................TTTGTGACCGCCACTAACGGGT.......................................................................... 22 1 99.00 5.00 0.00 94.00 ..................................TTTGTGACCxACACTAACGGGT.......................................................................... 21 1 97.00 1.00 0.00 96.00 ..................................TTTGTGACCGACACTAGCGGGT.......................................................................... 22 1 95.00 6.00 1.00 88.00 ..................................TTTGTGACCGGCACTAACGGGT.......................................................................... 22 1 94.00 7.00 0.00 87.00 ..................................TTTGTGACCGACACTACCGGGT.......................................................................... 22 1 93.00 5.00 0.00 88.00 ..................................ATTGTGACCGACACTAACGGGT.......................................................................... 22 1 90.00 0.00 0.00 90.00 ..................................TTTCTGACCGACACTAACGGGT.......................................................................... 22 1 90.00 11.00 0.00 79.00 ..................................TCTGTGACCGACACTAACGGGT.......................................................................... 22 1 87.00 17.00 0.00 70.00 ..............................................................................CTCGTTTTTGCGATCACAAATC.............................. 22 1 79.00 1.00 0.00 78.00 ..................................TTTGTGATCGACACTAACGGGT.......................................................................... 22 1 78.00 15.00 0.00 63.00 ..................................TATGTGACCGACACTAACGGGT.......................................................................... 22 1 74.00 1.00 0.00 73.00 ..................................TTTGTGACCGACACTAACGGAT.......................................................................... 22 1 70.00 1.00 0.00 69.00 ....................................TGTGACCGACACTAACGGGT.......................................................................... 20 1 67.00 4.00 0.00 63.00 ..................................TTTGTGACCGACACTAACGT............................................................................ 20 1 66.00 10.00 0.00 56.00 ...................................TTTTGACCGACACTAACGGGT.......................................................................... 21 1 65.00 5.00 0.00 60.00 ..................................TTTGTGACCGACACTAACGGCT.......................................................................... 22 1 65.00 6.00 0.00 59.00 ..................................TTTGTGACCGATACTAACGGGT.......................................................................... 22 1 63.00 7.00 0.00 56.00 ..................................TTTGTGACCGACACCAACGGGT.......................................................................... 22 1 60.00 11.00 0.00 49.00 ..................................TTTGTGACCGACAATAACGGGT.......................................................................... 22 1 57.00 2.00 0.00 55.00 ..................................GTTGTGACCGACACTAACGGGT.......................................................................... 22 1 57.00 1.00 0.00 56.00 ..................................TTTGTGACCGACACTGACGGGT.......................................................................... 22 1 54.00 4.00 0.00 50.00 ..................................TTTGTGACCGACACTAACGGTT.......................................................................... 22 1 53.00 3.00 0.00 50.00 ..............................................................................CTCGTTTTTGCGATCACAAATCA............................. 23 1 52.00 0.00 1.00 51.00 ..................................TTTGTGACCGACCCTAACGGGT.......................................................................... 22 1 51.00 5.00 0.00 46.00 ..................................TTTGTGACCGACACTAACGGGTATT....................................................................... 25 1 50.00 6.00 0.00 44.00 ..................................TTTGTGACCGACATTAACGGGT.......................................................................... 22 1 47.00 4.00 0.00 43.00 ..................................TTTGAGACCGACACTAACGGGT.......................................................................... 22 1 47.00 1.00 0.00 46.00 ..................................TTTGTGACCGACACTAACGGGAA......................................................................... 23 1 45.00 3.00 0.00 42.00 ..................................TTTGTGACCGAAACTAACGGGT.......................................................................... 22 1 43.00 1.00 0.00 42.00 ..................................TTTGTGACCTACACTAACGGGTA......................................................................... 23 1 42.00 0.00 0.00 42.00 ..................................TTTGTGACCGACACTCACGGGT.......................................................................... 22 1 40.00 5.00 0.00 35.00 ..................................TTTGTGCCCGACACTAACGGGT.......................................................................... 22 1 39.00 4.00 0.00 35.00 ..................................TTTGTGACCGxxACTAACGGGT.......................................................................... 20 1 39.00 8.00 0.00 31.00 ...................................TTGTGACCGACACTAACGGGTA......................................................................... 22 1 38.00 0.00 0.00 38.00 ..................................TTTGTGACCGACACTATCGGGT.......................................................................... 22 1 35.00 1.00 0.00 34.00 ..................................TTTGTGACCGACACTAACGGGTAAA....................................................................... 25 1 34.00 3.00 0.00 31.00 ..................................TTTGTTACCGACACTAACGGGTA......................................................................... 23 1 33.00 0.00 0.00 33.00 ..................................TTTGTxACCGACACTAACGGGT.......................................................................... 21 1 31.00 0.00 0.00 31.00 ..................................TTTGTGACCGACACTAACGGGCA......................................................................... 23 1 31.00 1.00 0.00 30.00 ..................................TTTGTGACAAACACTAACGGGT.......................................................................... 22 1 29.00 0.00 0.00 29.00 ..................................TTTGTGACCGACACTAACGGGTAC........................................................................ 24 1 29.00 1.00 0.00 28.00 ..................................TTTGTGACCGACACTAACGTGTA......................................................................... 23 1 28.00 1.00 0.00 27.00 ..................................TTTGTGACCGTCACTAACGGGT.......................................................................... 22 1 28.00 4.00 0.00 24.00 ..................................TTTGTGACCGAGACTAACGGGT.......................................................................... 22 1 28.00 4.00 0.00 24.00 ..................................TTTGTGACCGACACTAAGGGGT.......................................................................... 22 1 28.00 1.00 0.00 27.00 ..................................TTTGTGACCGACACTAACTGGTA......................................................................... 23 1 28.00 2.00 0.00 26.00 ..................................TTTGTGACCGACACTAAAAGGT.......................................................................... 22 1 28.00 0.00 0.00 28.00 .....................................TTGACCGACACTAACGGGT.......................................................................... 19 1 26.00 1.00 0.00 25.00 ..................................TTTGTGACCxACACTAACGGGTA......................................................................... 22 1 24.00 0.00 0.00 24.00 ..................................TTAGTGACCGACACTAACGGGT.......................................................................... 22 1 24.00 0.00 0.00 24.00 ..................................TTTGTGACCCACACTAACGGGTA......................................................................... 23 1 24.00 0.00 0.00 24.00 ..................................TTTGTGACCAACACTAACGGGTA......................................................................... 23 1 24.00 0.00 0.00 24.00 ..................................TTTGCGACCGACACTAACGGGTA......................................................................... 23 1 23.00 3.00 0.00 20.00 .........................................................ATTGTTTGATCACCAGGATTA.................................................... 21 1 23.00 5.00 0.00 18.00 ..................................TTTGTGTCCGACACTAACGGGT.......................................................................... 22 1 22.00 1.00 0.00 21.00 ..................................TTTGTGACTGACACTAACGGGTA......................................................................... 23 1 22.00 1.00 0.00 21.00 ..................................TTTGTGACCGACACTxACGGGT.......................................................................... 21 1 22.00 4.00 0.00 18.00 ..................................TTTGTGACCGACACTAACGGGTC......................................................................... 23 1 21.00 1.00 0.00 20.00 ..................................TTTGTGAACGACACTAACGGGTA......................................................................... 23 1 20.00 0.00 0.00 20.00 .........................................................ATTGTTTGATCACCAGGATT..................................................... 20 1 20.00 2.00 0.00 18.00 ..................................TTTGTGAGCGACACTAACGGGT.......................................................................... 22 1 20.00 1.00 0.00 19.00

droYak2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	chr3L:11678621-11678750 +	90.13	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG TGATTTTATGCCGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGTCGCCAGGATTACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAACGCAACAAAGTCG Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head ..................................TTTGTGACCGACACTAACGGGT.......................................................................... 22 1 108772.00 0.00 38010.00 1284.00 58968.00 10510.00 ..................................TTTGTGACCGACACTAACGGGTA......................................................................... 23 1 12757.00 1.00 4346.00 103.00 6507.00 1800.00 ..................................TTTGTGACCGACACTAACGGGTAT........................................................................ 24 1 2800.00 0.00 1055.00 18.00 1637.00 90.00 ..................................TTTGTGACCGACACTAACGGGC.......................................................................... 22 1 2713.00 0.00 209.00 10.00 1061.00 1433.00 ..................................TTTGTGACCGACACTAACGGG........................................................................... 21 1 2197.00 0.00 467.00 10.00 657.00 1063.00 ..................................TTTGTGACCGACACTAACGGGTAA........................................................................ 24 1 1653.00 0.00 614.00 6.00 1002.00 31.00 ..................................TTTGTGACCGACACTAACGGGA.......................................................................... 22 1 1292.00 0.00 451.00 11.00 772.00 58.00 ..................................TTTGTGACCGACACTAACGGGG.......................................................................... 22 1 1210.00 0.00 178.00 1.00 406.00 625.00 ..................................TTTGTGACCGACACTACCGGGT.......................................................................... 22 1 1090.00 0.00 120.00 0.00 967.00 3.00 ..................................TTTGTGACCGACACTCACGGGT.......................................................................... 22 1 1002.00 0.00 185.00 0.00 817.00 0.00 ..................................TTTGTGACCGACACTAACG............................................................................. 19 1 741.00 0.00 293.00 0.00 376.00 72.00 ..................................TTTGTGACCGCCACTAACGGGT.......................................................................... 22 1 603.00 0.00 85.00 0.00 515.00 3.00 ..................................TTTGTGACCGACACTAACGTGT.......................................................................... 22 1 456.00 0.00 120.00 0.00 326.00 10.00 ..................................TTTGTGACCGACACTAACGG............................................................................ 20 1 453.00 0.00 92.00 7.00 159.00 195.00 ..................................TTTGTGACCGACACTAACGGTT.......................................................................... 22 1 366.00 0.00 45.00 1.00 320.00 0.00 ..................................TTTGTGACCGACACTAACGGGTT......................................................................... 23 1 349.00 0.00 65.00 2.00 185.00 97.00 ..................................TTTGTGACCGACCCTAACGGGT.......................................................................... 22 1 319.00 0.00 56.00 0.00 263.00 0.00 ..................................TTTGGGACCGACACTAACGGGT.......................................................................... 22 1 299.00 0.00 50.00 1.00 242.00 6.00 ..................................TTTGTGACCGACTCTAACGGGT.......................................................................... 22 1 290.00 0.00 61.00 0.00 229.00 0.00 ..................................TTTGTGACCGACACTAACAGGT.......................................................................... 22 1 275.00 0.00 194.00 1.00 78.00 2.00 ..................................TTTGTGACCGGCACTAACGGGT.......................................................................... 22 1 268.00 0.00 61.00 0.00 195.00 12.00 ..................................TTTGTGACCGACACTAACTGGT.......................................................................... 22 1 261.00 0.00 112.00 0.00 148.00 1.00 ...................................TTGTGACCGACACTAACGGGT.......................................................................... 21 1 231.00 0.00 67.00 4.00 138.00 22.00 ..................................TTTGTGACCGACACTAACGGGTC......................................................................... 23 1 222.00 0.00 32.00 1.00 187.00 2.00 ..................................TTTGTGACCGACGCTAACGGGT.......................................................................... 22 1 199.00 0.00 46.00 2.00 137.00 14.00 ..................................TTTGTGACCTACACTAACGGGT.......................................................................... 22 1 197.00 0.00 56.00 1.00 129.00 11.00 ..................................TTTGTGACCGACACTAACGGCT.......................................................................... 22 1 184.00 0.00 45.00 0.00 139.00 0.00 ..................................CTTGTGACCGACACTAACGGGT.......................................................................... 22 1 182.00 0.00 61.00 1.00 112.00 8.00 ..................................TTTGTGGCCGACACTAACGGGT.......................................................................... 22 1 170.00 0.00 56.00 1.00 99.00 14.00 ..................................TTTGTGACTGACACTAACGGGT.......................................................................... 22 1 163.00 0.00 56.00 1.00 88.00 18.00 ..................................TTTGTGACCGACAATAACGGGT.......................................................................... 22 1 160.00 0.00 65.00 0.00 95.00 0.00 ..................................TTTGCGACCGACACTAACGGGT.......................................................................... 22 1 159.00 0.00 54.00 1.00 96.00 8.00 ..................................TGTGTGACCGACACTAACGGGT.......................................................................... 22 1 156.00 0.00 39.00 0.00 117.00 0.00 ..................................TTTGTGACCGACACTAACGCGT.......................................................................... 22 1 155.00 0.00 34.00 0.00 118.00 3.00 ..................................TTGGTGACCGACACTAACGGGT.......................................................................... 22 1 152.00 0.00 52.00 0.00 100.00 0.00 ..................................TTTGTGACCGTCACTAACGGGT.......................................................................... 22 1 151.00 0.00 20.00 0.00 131.00 0.00 ..................................TTTGTGACCGACACTAGCGGGT.......................................................................... 22 1 148.00 0.00 44.00 1.00 98.00 5.00 ..................................TTTGTGACCGACACTAACGGGTAG........................................................................ 24 1 143.00 0.00 38.00 0.00 62.00 43.00 ..................................TTTGTGACCGACACTGACGGGT.......................................................................... 22 1 135.00 0.00 36.00 1.00 97.00 1.00 ..................................TTTGTGACCGACACTAACGGGCA......................................................................... 23 1 121.00 0.00 29.00 1.00 86.00 5.00 ..................................TTTGTGACCGACACTAACGGGTAC........................................................................ 24 1 116.00 0.00 32.00 0.00 62.00 22.00 ..................................TTTGTGACCGACACTACCGGGTA......................................................................... 23 1 110.00 0.00 6.00 0.00 103.00 1.00 ..................................TTTGTTACCGACACTAACGGGT.......................................................................... 22 1 109.00 0.00 45.00 3.00 60.00 1.00 ..................................TTTGTGACCGACACTAACCGGT.......................................................................... 22 1 105.00 0.00 26.00 0.00 79.00 0.00 ..................................TTTGTGACCGACACTAACGAGT.......................................................................... 22 1 104.00 0.00 69.00 1.00 33.00 1.00 ..................................TTTGTGACCAACACTAACGGGT.......................................................................... 22 1 100.00 0.00 49.00 0.00 45.00 6.00 ..................................TTTGAGACCGACACTAACGGGT.......................................................................... 22 1 99.00 0.00 12.00 0.00 84.00 3.00 ..................................TTTGTGACAGACACTAACGGGT.......................................................................... 22 1 97.00 0.00 33.00 0.00 60.00 4.00 ..................................TTTGTGACCCACACTAACGGGT.......................................................................... 22 1 92.00 0.00 27.00 0.00 65.00 0.00 ..................................TTTGTGACCGACACTCACGGGTA......................................................................... 23 1 86.00 0.00 23.00 0.00 63.00 0.00 ..................................TTTGTGAACGACACTAACGGGT.......................................................................... 22 1 85.00 0.00 21.00 0.00 61.00 3.00 ..................................TTTATGACCGACACTAACGGGT.......................................................................... 22 1 85.00 0.00 40.00 0.00 37.00 8.00 ..................................TTTGTGACCGACACCAACGGGT.......................................................................... 22 1 85.00 0.00 35.00 0.00 49.00 1.00 ..................................TTTGTGACCGACACTAAAGGGT.......................................................................... 22 1 83.00 0.00 30.00 2.00 49.00 2.00 .................................CTTTGTGACCGACACTAACGGGT.......................................................................... 23 1 83.00 0.00 26.00 2.00 55.00 0.00 ..................................TTTGTAACCGACACTAACGGGT.......................................................................... 22 1 80.00 0.00 34.00 0.00 42.00 4.00 ..................................TTTGTGACCGACACTATCGGGT.......................................................................... 22 1 80.00 0.00 10.00 0.00 69.00 1.00 ..................................TTTGTGACCGACACTAACGGGTATT....................................................................... 25 1 78.00 0.00 29.00 0.00 40.00 9.00 ..................................TTCGTGACCGACACTAACGGGT.......................................................................... 22 1 76.00 0.00 23.00 1.00 51.00 1.00 ..................................TTTGTGACCGACACTAACGGT........................................................................... 21 1 74.00 0.00 20.00 3.00 40.00 11.00 ..................................TTTCTGACCGACACTAACGGGT.......................................................................... 22 1 73.00 0.00 25.00 0.00 47.00 1.00 ..................................TTTGTGACCGACACTAATGGGT.......................................................................... 22 1 72.00 0.00 21.00 0.00 41.00 10.00 ..................................TTTGTGATCGACACTAACGGGT.......................................................................... 22 1 72.00 0.00 21.00 0.00 38.00 13.00 ..................................TTTGTCACCGACACTAACGGGT.......................................................................... 22 1 71.00 0.00 20.00 2.00 47.00 2.00 ..................................TCTGTGACCGACACTAACGGGT.......................................................................... 22 1 69.00 0.00 30.00 2.00 37.00 0.00 ..................................TTTGTGACCGACACTTACGGGT.......................................................................... 22 1 65.00 0.00 15.00 0.00 50.00 0.00 ..................................TTTGTGACCGACACTAACGT............................................................................ 20 1 65.00 0.00 19.00 2.00 39.00 5.00 ..................................TTTGTGACCGCCACTACCGGGT.......................................................................... 22 1 64.00 0.00 2.00 0.00 62.00 0.00 ..................................TTTGTGACCGACACTAACGGGTTT........................................................................ 24 1 64.00 0.00 22.00 1.00 38.00 3.00 ..................................TTTGTGACCGACACTAACGGGGA......................................................................... 23 1 64.00 0.00 19.00 0.00 38.00 7.00 ..................................TTTGTGACCGATACTAACGGGT.......................................................................... 22 1 63.00 0.00 24.00 0.00 36.00 3.00 ..................................TTTGTGTCCGACACTAACGGGT.......................................................................... 22 1 61.00 0.00 9.00 1.00 48.00 3.00 ..................................TTTGTGACCGCCACTCACGGGT.......................................................................... 22 1 61.00 0.00 3.00 0.00 58.00 0.00 ..................................TTTGTGCCCGACACTAACGGGT.......................................................................... 22 1 59.00 0.00 10.00 0.00 44.00 5.00 ..................................TTTGTGACCGACACTCACGGGC.......................................................................... 22 1 58.00 0.00 6.00 0.00 52.00 0.00 ..................................TTTGTGACCGACACTAACGGGTAAA....................................................................... 25 1 57.00 0.00 16.00 0.00 40.00 1.00 ..................................TTTGTGACCGACACTAACGGAT.......................................................................... 22 1 57.00 0.00 33.00 1.00 22.00 1.00 ..................................TTTGTGACCGACACTACCGGGC.......................................................................... 22 1 56.00 0.00 5.00 0.00 50.00 1.00 ..................................TTTGTGACCGGCTCTAACGGGT.......................................................................... 22 1 55.00 0.00 11.00 0.00 44.00 0.00 ..................................TTTGTGACCGACACGAACGGGT.......................................................................... 22 1 54.00 0.00 9.00 0.00 45.00 0.00 ..................................TTTGTGACCGCCACTAACGGGTA......................................................................... 23 1 53.00 0.00 10.00 1.00 42.00 0.00 ..................................TTTGTGACCGAAACTAACGGGT.......................................................................... 22 1 52.00 0.00 12.00 0.00 33.00 7.00 ..................................TTTGTGACCGACATTAACGGGT.......................................................................... 22 1 52.00 0.00 14.00 0.00 38.00 0.00 ..................................TTTGTGACCGACTCTAACGGGC.......................................................................... 22 1 52.00 0.00 8.00 0.00 44.00 0.00 ..................................TTTGTGAGCGACACTAACGGGT.......................................................................... 22 1 51.00 0.00 16.00 0.00 34.00 1.00 ..................................TTTGTGACCGACACTCCCGGGT.......................................................................... 22 1 50.00 0.00 4.00 0.00 46.00 0.00 ..................................TTTGTGACCGACACTAACGGGTG......................................................................... 23 1 50.00 0.00 13.00 0.00 23.00 14.00 ..................................ATTGTGACCGACACTAACGGGT.......................................................................... 22 1 49.00 0.00 12.00 0.00 37.00 0.00 ..................................TTTGTGACCGACACTAACGGGTCT........................................................................ 24 1 48.00 0.00 7.00 0.00 41.00 0.00 ..................................TTTTTGACCGACACTAACGGGT.......................................................................... 22 1 45.00 0.00 9.00 1.00 33.00 2.00 ..................................TTTGTGACCGACACTAACGGGAA......................................................................... 23 1 42.00 0.00 5.00 0.00 26.00 11.00 ..................................TTTGGGACCGACACTAACGGGC.......................................................................... 22 1 42.00 0.00 8.00 0.00 33.00 1.00 ..................................TTTGTGACCGACACTAACGCGC.......................................................................... 22 1 36.00 0.00 9.00 0.00 27.00 0.00 ..................................TTTGTGACCGACCCTCACGGGT.......................................................................... 22 1 35.00 0.00 3.00 0.00 32.00 0.00 ..................................TTTGTGACCGCCACTAACGGGC.......................................................................... 22 1 35.00 0.00 2.00 0.00 33.00 0.00 ..................................TTGGGGACCGACACTAACGGGT.......................................................................... 22 1 35.00 0.00 8.00 0.00 27.00 0.00 ..................................TTTGGGACCGGCACTAACGGGT.......................................................................... 22 1 34.00 0.00 7.00 0.00 27.00 0.00 ..................................TTTGTGACCGACACTAACGGTC.......................................................................... 22 1 34.00 0.00 4.00 0.00 30.00 0.00 ..................................TTTGTGACCGACACTAACGTGTA......................................................................... 23 1 33.00 0.00 9.00 0.00 24.00 0.00 ..................................TTTGGGACCGACACTAACGGGTA......................................................................... 23 1 33.00 0.00 8.00 0.00 23.00 2.00 ..................................TTTGTGACCGACCCTACCGGGT.......................................................................... 22 1 33.00 0.00 2.00 0.00 31.00 0.00

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_4784:11632283-11632412 +	90.89	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG TGATTTTATGGCCAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAACGCAACGAAGTCG Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ..................................TTTGTGACCGACACTAACGGGT.......................................................................... 22 1 194738.00 4.00 54131.00 0.00 140603.00 ..................................TTTGTGACCGACACTAACGGGTA......................................................................... 23 1 33740.00 0.00 12598.00 0.00 21142.00 ..................................TTTGTGACCGACACTAACGGGTAA........................................................................ 24 1 6154.00 1.00 2696.00 0.00 3457.00 ..................................TTTGTGACCGACACTAACTGGT.......................................................................... 22 1 4744.00 1.00 153.00 0.00 4590.00 ..................................TTTGTGACCGACACTAACGGGTAT........................................................................ 24 1 3338.00 0.00 1364.00 0.00 1974.00 ..................................TTTGTGACCGACACTAACGGG........................................................................... 21 1 2278.00 0.00 597.00 0.00 1681.00 ..................................TTTGTGACCGACACTAACGGGA.......................................................................... 22 1 1663.00 0.00 494.00 0.00 1169.00 ..................................TTTGTTACCGACACTAACGGGT.......................................................................... 22 1 1622.00 0.00 55.00 0.00 1567.00 ..................................TTTGTGACCTACACTAACGGGT.......................................................................... 22 1 1448.00 0.00 84.00 0.00 1364.00 ..................................TTTGTGACCGACACTAACGGGC.......................................................................... 22 1 1367.00 0.00 536.00 0.00 831.00 ..................................TTTGTGACCGACACTAACGTGT.......................................................................... 22 1 1360.00 1.00 238.00 0.00 1121.00 ..................................TTTGTGACCGACACTAACGG............................................................................ 20 1 1035.00 0.00 109.00 0.00 926.00 ..................................TTTGTGACAGACACTAACGGGT.......................................................................... 22 1 980.00 0.00 41.00 0.00 939.00 ..................................TTTGTGACCGACACTAACG............................................................................. 19 1 847.00 0.00 130.00 0.00 717.00 ..................................TTTGTGACCGACACTACCGGGT.......................................................................... 22 1 749.00 0.00 650.00 0.00 99.00 ..................................TTTGTGACCGACACTAACGGGG.......................................................................... 22 1 734.00 0.00 232.00 0.00 502.00 ...................................TTGTGACCGACACTAACGGGT.......................................................................... 21 1 701.00 0.00 137.00 0.00 564.00 ..................................TTTGTGACCGACACTAACTGGTA......................................................................... 23 1 627.00 0.00 28.00 0.00 599.00 ..................................TTTGTGACCGACACTAACAGGT.......................................................................... 22 1 562.00 0.00 412.00 0.00 150.00 ..................................TTTGTGACCGACACTAACGGGTT......................................................................... 23 1 560.00 0.00 204.00 0.00 356.00 ..................................TTTTTGACCGACACTAACGGGT.......................................................................... 22 1 481.00 0.00 21.00 0.00 460.00 ..................................TTTGTGACCGACAATAACGGGT.......................................................................... 22 1 431.00 0.00 60.00 0.00 371.00 ..................................TTTGTGACCGACACTAAAGGGT.......................................................................... 22 1 419.00 0.00 58.00 0.00 361.00 ..................................TTTGTGACCGACACTAACGGTT.......................................................................... 22 1 418.00 0.00 217.00 0.00 201.00 ..................................TTTGTGACCGACACTAACGGGTC......................................................................... 23 1 416.00 0.00 159.00 0.00 257.00 ..................................TTTGTGACCGACACTCACGGGT.......................................................................... 22 1 377.00 1.00 299.00 0.00 77.00 ..................................TTTGTGACTGACACTAACGGGT.......................................................................... 22 1 354.00 0.00 120.00 0.00 234.00 ..................................TTTGTGACCGCCACTAACGGGT.......................................................................... 22 1 330.00 0.00 184.00 0.00 146.00 ..................................TTTGTGAACGACACTAACGGGT.......................................................................... 22 1 316.00 0.00 25.00 0.00 291.00 ..................................TTTGTGACCGAAACTAACGGGT.......................................................................... 22 1 312.00 0.00 16.00 0.00 296.00 ..................................TTTGTGACCGACACTAACGGT........................................................................... 21 1 307.00 0.00 17.00 0.00 290.00 ..................................TTCGTGACCGACACTAACGGGT.......................................................................... 22 1 279.00 0.00 35.00 0.00 244.00 ..................................TTTGTTACCGACACTAACGGGTA......................................................................... 23 1 272.00 0.00 16.00 0.00 256.00 ..................................CTTGTGACCGACACTAACGGGT.......................................................................... 22 1 265.00 0.00 55.00 0.00 210.00 ..................................TTTGTGACCTACACTAACGGGTA......................................................................... 23 1 257.00 0.00 26.00 0.00 231.00 ..................................TTTGTGACCGACACTAACGTGTA......................................................................... 23 1 250.00 0.00 36.00 0.00 214.00 ..................................TTTGCGACCGACACTAACGGGT.......................................................................... 22 1 236.00 0.00 55.00 0.00 181.00 ..................................TTTGTGGCCGACACTAACGGGT.......................................................................... 22 1 235.00 0.00 65.00 0.00 170.00 ..................................TTTGTGACCGACCCTAACGGGT.......................................................................... 22 1 227.00 0.00 139.00 0.00 88.00 .................................CTTTGTGACCGACACTAACGGGT.......................................................................... 23 1 215.00 0.00 46.00 0.00 169.00 ..................................TTTGTGACCAACACTAACGGGT.......................................................................... 22 1 214.00 0.00 56.00 0.00 158.00 ..................................TTTGTGACCGACGCTAACGGGT.......................................................................... 22 1 205.00 0.00 73.00 0.00 132.00 ..................................TTTGTGACCGGCACTAACGGGT.......................................................................... 22 1 204.00 0.00 100.00 0.00 104.00 ..................................TTTGTGACCGACACTAACGAGT.......................................................................... 22 1 198.00 0.00 123.00 0.00 75.00 ..................................TTTGTGACAGACACTAACGGGTA......................................................................... 23 1 198.00 0.00 7.00 0.00 191.00 ..................................TTTGTGACCGACACTAATGGGT.......................................................................... 22 1 174.00 0.00 30.00 0.00 144.00 ..................................TTTGTGACCGACACTAACGGGTG......................................................................... 23 1 172.00 0.00 27.00 0.00 145.00 ..................................TTTGTGACCGACACTAACGGGTAAA....................................................................... 25 1 168.00 0.00 46.00 0.00 122.00 ..................................TTAGTGACCGACACTAACGGGT.......................................................................... 22 1 164.00 0.00 0.00 0.00 164.00 ..................................TTTGTGACCGACACTAACCGGT.......................................................................... 22 1 163.00 0.00 55.00 0.00 108.00 ..................................TTTGTGATCGACACTAACGGGT.......................................................................... 22 1 163.00 0.00 42.00 0.00 121.00 ..................................TTTGTGACCGATACTAACGGGT.......................................................................... 22 1 161.00 0.00 32.00 0.00 129.00 ..................................TTTGTGACCGACACTAGCGGGT.......................................................................... 22 1 161.00 0.00 58.00 0.00 103.00 ..................................TCTGTGACCGACACTAACGGGT.......................................................................... 22 1 158.00 0.00 34.00 0.00 124.00 ..................................TTGGTGACCGACACTAACGGGT.......................................................................... 22 1 158.00 0.00 45.00 0.00 113.00 ..................................TTTGTAACCGACACTAACGGGT.......................................................................... 22 1 155.00 0.00 35.00 0.00 120.00 ..................................TTTGTGACCGACACTGACGGGT.......................................................................... 22 1 148.00 0.00 63.00 0.00 85.00 ..................................TTTGTGACCGACACTACCGGGTA......................................................................... 23 1 147.00 0.00 132.00 0.00 15.00 ..................................TTTGTGACCGACACTAACGGGTAG........................................................................ 24 1 145.00 0.00 27.00 0.00 118.00 ..................................TTTGTGACCGACACCAACGGGT.......................................................................... 22 1 144.00 0.00 31.00 0.00 113.00 ..................................TTTGTGACCGACACTAACGGGCA......................................................................... 23 1 140.00 0.00 90.00 0.00 50.00 ..................................TTTATGACCGACACTAACGGGT.......................................................................... 22 1 134.00 0.00 27.00 0.00 107.00 ..................................TTTGTGACCGACACTAACGCGT.......................................................................... 22 1 124.00 0.00 66.00 0.00 58.00 ..................................TTTGTGACCCACACTAACGGGT.......................................................................... 22 1 123.00 0.00 21.00 0.00 102.00 ..................................TTTGTGACCGACACTAACGGCT.......................................................................... 22 1 121.00 0.00 45.00 0.00 76.00 ..................................TTTGTGACCGACACTAACTGGTAA........................................................................ 24 1 120.00 0.00 14.00 0.00 106.00 ..................................TTTGTGACCGACACTAACGGAT.......................................................................... 22 1 119.00 0.00 42.00 0.00 77.00 ..................................TTTGTGACCGACACTAACGGGTAC........................................................................ 24 1 116.00 0.00 74.00 0.00 42.00 ..................................TTTGTGACCGACTCTAACGGGT.......................................................................... 22 1 114.00 0.00 96.00 0.00 18.00 ....................................TTTGACCGACACTAACGGGT.......................................................................... 20 1 113.00 0.00 3.00 0.00 110.00 ..................................TTTGTGACCGACATTAACGGGT.......................................................................... 22 1 108.00 0.00 27.00 0.00 81.00 ..................................TTTGTGACCGACACTAACGGTTA......................................................................... 23 1 107.00 0.00 40.00 0.00 67.00 ..................................TTTGTGACCGACACTAACGGGTATT....................................................................... 25 1 107.00 0.00 38.00 0.00 69.00 ...................................TTGTGACCGACACTAACGGGTA......................................................................... 22 1 104.00 0.00 30.00 0.00 74.00 ..................................TTTGTGACCxACACTAACGGGT.......................................................................... 21 1 103.00 0.00 5.00 0.00 98.00 ..................................TTTGTGACCGACACTAACAGGTA......................................................................... 23 1 100.00 0.00 73.00 0.00 27.00 ..................................TTTGTCACCGACACTAACGGGT.......................................................................... 22 1 100.00 0.00 18.00 0.00 82.00 ..................................TTTCTGACCGACACTAACGGGT.......................................................................... 22 1 99.00 0.00 26.00 0.00 73.00 ..................................TTTGTTACCGACACTAACTGGT.......................................................................... 22 1 97.00 0.00 0.00 0.00 97.00 ..................................TTTGTGACTGACACTAACGGGTA......................................................................... 23 1 96.00 0.00 40.00 0.00 56.00 ..................................TTTGTGACCGACACTAACGGGGA......................................................................... 23 1 93.00 0.00 50.00 0.00 43.00 ....................................TGTGACCGACACTAACGGGT.......................................................................... 20 1 90.00 0.00 15.00 0.00 75.00 ..................................TTTGTGACCGACACTAACGT............................................................................ 20 1 87.00 0.00 10.00 0.00 77.00 ..................................TTTGTGACCGACACTAACGGGAA......................................................................... 23 1 85.00 0.00 38.00 0.00 47.00 ..................................TTTGTGACCGxxACTAACGGGT.......................................................................... 20 1 82.00 0.00 2.00 0.00 80.00 ...................................TTTTGACCGACACTAACGGGT.......................................................................... 21 1 79.00 0.00 2.00 0.00 77.00 ..................................TTTGTGAxCGACACTAACGGGT.......................................................................... 21 1 75.00 0.00 4.00 0.00 71.00 ..................................TTTGTGACCGACACTAACGGGTTT........................................................................ 24 1 73.00 0.00 10.00 0.00 63.00 ..................................TTTGTGACCGTCACTAACGGGT.......................................................................... 22 1 71.00 0.00 41.00 0.00 30.00 ..................................TTTGAGACCGACACTAACGGGT.......................................................................... 22 1 71.00 0.00 40.00 0.00 31.00 ..................................TTTGTGACCGACACTAACGGGTAAT....................................................................... 25 1 71.00 1.00 29.00 0.00 41.00 ..................................TTTGTGACCGCCACTAACGGGTA......................................................................... 23 1 68.00 0.00 47.00 0.00 21.00 ..................................TTTGTGACCGACACTAACGGGTCA........................................................................ 24 1 68.00 0.00 28.00 0.00 40.00 ..............................................................................CTCGTTTTTGCGATCACAAATC.............................. 22 1 65.00 0.00 7.00 0.00 58.00 ..................................TTTGCGACCGACACTAACGGGTA......................................................................... 23 1 63.00 0.00 22.00 0.00 41.00 ..................................TGTGTGACCGACACTAACGGGT.......................................................................... 22 1 61.00 0.00 51.00 0.00 10.00 ..................................TTTGTGATCGACACTAACGGGTA......................................................................... 23 1 60.00 0.00 7.00 0.00 53.00 ..................................TTTGTGACCGACACTAACGGGTTA........................................................................ 24 1 59.00 0.00 10.00 0.00 49.00 ..................................TTTGTGCCCGACACTAACGGGT.......................................................................... 22 1 59.00 0.00 11.00 0.00 48.00 ..................................TTTTTGACCGACACTAACGGGTA......................................................................... 23 1 58.00 0.00 3.00 0.00 55.00 ..................................TTTGTGACCGACACTCACGGGTA......................................................................... 23 1 58.00 0.00 45.00 0.00 13.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000454113:3056710-3056847 -	66.71	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCC----------------AGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAA--------ACTCAACGAAATTG AGTTCC-------TATCCTGTGTTGTTGTTTCGTTTTGTGACCGACACTAACGGGTAATTGATCGGCCCCCAAAAGCCGCCCACCGCAGGATTACTCGTTTTTGCGATCACAAATCCTGAAATTTCAGCAAAGAGCAGCAATTCA--------- Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000409711:3524239-3524377 +	71.0	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCC---------------GCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG -------GTTCCAAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTATGGCCTAAAAGGAGCCGCTCACCAGGATTACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAAAGCAGCTAAATCA Size Hit Count Total Norm

droBia1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302334:85647-85777 +	70.43	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCA--------------GGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG A--------------TCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTCCGGCCCCCAGGAGCCGCCCCTCAGGATTACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAGAGCAGCAAAGTCC Size Hit Count Total Norm

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000414445:560331-560474 -	69.75	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCC--------------AGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG AGTTCCGAATCCGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTCGGCCCCCAAAAGCCGCCCCGCAGGATTACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAGAGCAGCAAAATCA Size Hit Count Total Norm

droEle1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000490993:2151295-2151435 -	75.33	AGTTTTGGTGA----------CGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGC-CAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG GCTTCTGGTGATCAAGAGTTCCGAATCCTGTGCTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGATTGGCCCCGCAGGATTACTCGTTTCTGCGATCACAAATCATGAAATTGCAGCCAAAAGCAACAAAATCG Size Hit Count Total Norm
1	scf7180000490993:2151091-2151128 -	16.41	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACT-------CAACGAAATTG T---------------------------------------------------------------------------------------------------GTAAAATTAAAACAAAAATTGAACAAAAACAAATTTT Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000778919:9010-9134 +	84.24	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGC--CGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG AGTTC------CAAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTCGGCTCCG-CAGGATTACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAAAGCAGCAAAATCG Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000302391:1192138-1192294 -	52.45	AGTTTTGGTGACGAATC--------------CTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCC------GCC-------AGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG GGAAATAGTAAAAAGTTCCTATCCTTTTTTAACGTGTTGCTGTTTCGCTTTGTGACCGACACTAACGGGTAATTGTTTGGCCTTCTTAGCCGTTCCGCTGGATTACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCTAAGAGCAGCATTCAAG Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scaffold_13337:5918600-5918728 +	74.61	AGTTTTGGTGACGAATCC--TGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCC-GCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG GCCTTTTTTTAAAAAACAGAAATGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTATTTTACAGGACATACAGGATTACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAAAACAGCAAA---- Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ....................................TTTGTGACCGACACTAACGGGT........................................................................... 22 1 175454.00 3515.00 127525.00 44408.00 6.00 ....................................TTTGTGACCGACACTAACGGGTA.......................................................................... 23 1 11239.00 169.00 7680.00 3390.00 0.00 ....................................TTTGTGACCGACACTAACGG............................................................................. 20 1 2651.00 26.00 2236.00 389.00 0.00 ....................................TTTGTGACCGACACTAACGGGA........................................................................... 22 1 2175.00 47.00 1468.00 660.00 0.00 ....................................TTTGTGACCGACACTAACGGG............................................................................ 21 1 2106.00 41.00 1399.00 666.00 0.00 ....................................TTTGTGACCGACACTAACGGGC........................................................................... 22 1 1567.00 7.00 433.00 1127.00 0.00 ....................................TTTGTGACCGACACTAACGGGTAA......................................................................... 24 1 1381.00 16.00 999.00 366.00 0.00 ....................................TTTGTGACCGACACTAACGGT............................................................................ 21 1 1230.00 4.00 1137.00 89.00 0.00 ....................................TTTGTGACCGACACTAACGGGTAT......................................................................... 24 1 1196.00 30.00 606.00 559.00 1.00 ....................................TTTGTGACCGACACTAACG.............................................................................. 19 1 1125.00 4.00 515.00 606.00 0.00 ....................................TTTGTGACCGACACTAACTGGT........................................................................... 22 1 1124.00 16.00 1028.00 80.00 0.00 ....................................TTGGTGACCGACACTAACGGGT........................................................................... 22 1 988.00 0.00 857.00 131.00 0.00 ....................................TTTGTGACCGACACTAACGGAT........................................................................... 22 1 869.00 42.00 797.00 30.00 0.00 ....................................TTTGTGACCGACACTAACGGGG........................................................................... 22 1 686.00 4.00 270.00 412.00 0.00 ....................................TTTGTGACCGACACTAACGGGTT.......................................................................... 23 1 673.00 7.00 398.00 268.00 0.00 ....................................TTTGTGACCGACACTAACGTGT........................................................................... 22 1 649.00 10.00 518.00 121.00 0.00 ....................................TTTGTTACCGACACTAACGGGT........................................................................... 22 1 610.00 3.00 551.00 56.00 0.00 ....................................TTTGTGACCGACACTAACGGCT........................................................................... 22 1 607.00 23.00 422.00 162.00 0.00 ....................................TTTGTGACCTACACTAACGGGT........................................................................... 22 1 541.00 3.00 462.00 76.00 0.00 ....................................TTTGTGACAGACACTAACGGGT........................................................................... 22 1 508.00 10.00 323.00 175.00 0.00 ....................................TTTGTGACCGACACTAACGT............................................................................. 20 1 428.00 34.00 295.00 99.00 0.00 ....................................TTTGTGACCGACACTAACGGTT........................................................................... 22 1 402.00 22.00 301.00 79.00 0.00 ....................................TTTGTGACCGACACTAACGGGTTT......................................................................... 24 1 375.00 7.00 225.00 143.00 0.00 ....................................TTTGGGACCGACACTAACGGGT........................................................................... 22 1 345.00 1.00 8.00 336.00 0.00 ....................................TTTGTGACTGACACTAACGGGT........................................................................... 22 1 345.00 3.00 228.00 114.00 0.00 ....................................TTTGCGACCGACACTAACGGGT........................................................................... 22 1 290.00 4.00 140.00 146.00 0.00 ....................................TTTGTGACCGACACTACCGGGT........................................................................... 22 1 271.00 2.00 30.00 239.00 0.00 ....................................CTTGTGACCGACACTAACGGGT........................................................................... 22 1 271.00 2.00 186.00 83.00 0.00 ....................................TTTGTGACCGACGCTAACGGGT........................................................................... 22 1 249.00 9.00 128.00 112.00 0.00 ....................................TTTGTGACCGACACTAACAGGT........................................................................... 22 1 236.00 3.00 160.00 73.00 0.00 .................................................................................CTCGTTTTTGCGATCACAAATC.............................. 22 1 230.00 3.00 219.00 8.00 0.00 .....................................TTGTGACCGACACTAACGGGT........................................................................... 21 1 213.00 8.00 105.00 100.00 0.00 ....................................TTTGTGGCCGACACTAACGGGT........................................................................... 22 1 207.00 1.00 147.00 59.00 0.00 ....................................TTTGTGACCGGCACTAACGGGT........................................................................... 22 1 204.00 4.00 105.00 95.00 0.00 ....................................TTTGTGACCGACACTAGCGGGT........................................................................... 22 1 201.00 4.00 117.00 80.00 0.00 ....................................TTTGTGATCGACACTAACGGGT........................................................................... 22 1 197.00 5.00 152.00 40.00 0.00 ....................................TTTGTGACCGACACTAACGCGT........................................................................... 22 1 184.00 1.00 53.00 130.00 0.00 ....................................TTTGTGACCGCCACTAACGGGT........................................................................... 22 1 183.00 6.00 41.00 136.00 0.00 ....................................TTTGTGACCGACACTGACGGGT........................................................................... 22 1 180.00 8.00 103.00 69.00 0.00 ....................................TTTGTGACCGACACTAATGGGT........................................................................... 22 1 179.00 1.00 126.00 52.00 0.00 ....................................TTTGTGACCGACACTCACGGGT........................................................................... 22 1 178.00 7.00 25.00 146.00 0.00 ....................................TTCGTGACCGACACTAACGGGT........................................................................... 22 1 175.00 5.00 132.00 38.00 0.00 ....................................TTTGTGACCGACACTAACGAGT........................................................................... 22 1 173.00 3.00 126.00 44.00 0.00 ....................................TTTGTGACCGACAATAACGGGT........................................................................... 22 1 171.00 5.00 73.00 93.00 0.00 ....................................TTTGTGACCGACACTAACCGGT........................................................................... 22 1 164.00 0.00 46.00 118.00 0.00 ....................................TTTGTGACCGATACTAACGGGT........................................................................... 22 1 161.00 9.00 103.00 49.00 0.00 ....................................TTTGTGAACGACACTAACGGGT........................................................................... 22 1 159.00 2.00 78.00 79.00 0.00 ....................................TTTGTGACCGAAACTAACGGGT........................................................................... 22 1 157.00 12.00 108.00 37.00 0.00 ....................................TGTGTGACCGACACTAACGGGT........................................................................... 22 1 156.00 12.00 5.00 139.00 0.00 ....................................TTTGTGACCAACACTAACGGGT........................................................................... 22 1 153.00 2.00 103.00 48.00 0.00 ....................................TTTGAGACCGACACTAACGGGT........................................................................... 22 1 152.00 1.00 24.00 127.00 0.00 ....................................TCTGTGACCGACACTAACGGGT........................................................................... 22 1 146.00 8.00 96.00 42.00 0.00 ....................................TTTGTGACCGACTCTAACGGGT........................................................................... 22 1 141.00 4.00 16.00 121.00 0.00 ....................................TTTGTGACCGACCCTAACGGGT........................................................................... 22 1 129.00 9.00 21.00 99.00 0.00 ....................................TTTGTGACCGACACCAACGGGT........................................................................... 22 1 129.00 4.00 79.00 46.00 0.00 ....................................TTTGTCACCGACACTAACGGGT........................................................................... 22 1 127.00 1.00 60.00 66.00 0.00 ....................................TTTGTGACCGACACTAAAGGGT........................................................................... 22 1 124.00 3.00 70.00 51.00 0.00 ....................................TTTGTGACCGTCACTAACGGGT........................................................................... 22 1 116.00 2.00 26.00 88.00 0.00 ....................................TTTTTGACCGACACTAACGGGT........................................................................... 22 1 110.00 5.00 80.00 25.00 0.00 ....................................TTTGTAACCGACACTAACGGGT........................................................................... 22 1 106.00 2.00 71.00 33.00 0.00 ....................................TTTATGACCGACACTAACGGGT........................................................................... 22 1 102.00 4.00 65.00 33.00 0.00 ....................................TTTGTGACCCACACTAACGGGT........................................................................... 22 1 101.00 5.00 45.00 51.00 0.00 ....................................TTTGTGACCGACACTATCGGGT........................................................................... 22 1 100.00 0.00 37.00 63.00 0.00 ....................................GTTGTGACCGACACTAACGGGT........................................................................... 22 1 98.00 1.00 15.00 82.00 0.00 ....................................TTTGTGACCGAGACTAACGGGT........................................................................... 22 1 92.00 23.00 35.00 34.00 0.00 ....................................TTTGTGACCGACATTAACGGGT........................................................................... 22 1 88.00 3.00 43.00 42.00 0.00 ...................................CTTTGTGACCGACACTAACGGGT........................................................................... 23 1 82.00 3.00 24.00 55.00 0.00 ....................................TTTGTGACCGACACTAACGGGTATT........................................................................ 25 1 82.00 4.00 50.00 28.00 0.00 ....................................ATTGTGACCGACACTAACGGGT........................................................................... 22 1 82.00 1.00 19.00 62.00 0.00 ....................................TTTGTGACCGACACTAACGGGTC.......................................................................... 23 1 79.00 0.00 21.00 58.00 0.00 ....................................TTGGTGACCGACACTAACGGGTA.......................................................................... 23 1 74.00 0.00 67.00 7.00 0.00 ....................................TTTGTGACCGACACTAACGGA............................................................................ 21 1 70.00 0.00 48.00 22.00 0.00 ....................................TTTGTGACCGACACTAACGGGCA.......................................................................... 23 1 70.00 1.00 21.00 48.00 0.00 ....................................TTTCTGACCGACACTAACGGGT........................................................................... 22 1 70.00 2.00 19.00 49.00 0.00 ....................................TTTGTGACCGxxACTAACGGGT........................................................................... 20 1 69.00 1.00 67.00 1.00 0.00 ....................................TTTGTGAGCGACACTAACGGGT........................................................................... 22 1 69.00 0.00 28.00 41.00 0.00 ....................................TTTGTGACGGACACTAACGGGT........................................................................... 22 1 69.00 1.00 40.00 28.00 0.00 ....................................TTTGTGACCGACACGAACGGGT........................................................................... 22 1 66.00 0.00 8.00 58.00 0.00 ......................................TTTGACCGACACTAACGGGT........................................................................... 20 1 66.00 5.00 61.00 0.00 0.00 ....................................TTTGTGTCCGACACTAACGGGT........................................................................... 22 1 62.00 0.00 37.00 25.00 0.00 ....................................TTTGTGACCGACACTAACGGGTAG......................................................................... 24 1 61.00 0.00 48.00 13.00 0.00 ....................................TTTGTGACCGACACTAAGGGGT........................................................................... 22 1 58.00 1.00 34.00 23.00 0.00 ....................................TTTGTGACCGACACTAACGGATA.......................................................................... 23 1 56.00 2.00 50.00 4.00 0.00 ....................................TTTGTGACCGACACTAACTGGTA.......................................................................... 23 1 55.00 0.00 51.00 4.00 0.00 ....................................TTTGTGACCxACACTAACGGGT........................................................................... 21 1 54.00 2.00 49.00 3.00 0.00 ....................................TTTGTGACCGACACTAACGTGTA.......................................................................... 23 1 50.00 0.00 40.00 10.00 0.00 .................................................................................CTCGTTTTTGCGATCACAAATCCT............................ 24 1 48.00 2.00 36.00 10.00 0.00 .................................................................................CTCGTTTTTGCGATCACAAATCC............................. 23 1 48.00 0.00 41.00 7.00 0.00 ....................................TTTGGGACCGACACTAACGGGC........................................................................... 22 1 47.00 0.00 0.00 47.00 0.00 ....................................TTTGTGACCGACACTTACGGGT........................................................................... 22 1 44.00 4.00 9.00 31.00 0.00 ....................................TTTGTGACCTACACTAACGGGTA.......................................................................... 23 1 44.00 3.00 36.00 5.00 0.00 ....................................TATGTGACCGACACTAACGGGT........................................................................... 22 1 42.00 6.00 9.00 27.00 0.00 ....................................TTTGTTACCGACACTAACGGGTA.......................................................................... 23 1 42.00 0.00 37.00 5.00 0.00 ....................................TTTGTGACCGACACTAACGGTTA.......................................................................... 23 1 41.00 3.00 29.00 9.00 0.00 ....................................TTTGTGAxCGACACTAACGGGT........................................................................... 21 1 37.00 0.00 35.00 2.00 0.00 ....................................TTTGTGCCCGACACTAACGGGT........................................................................... 22 1 37.00 1.00 16.00 20.00 0.00 ....................................TTTGTGACCGACACTAACGGGAA.......................................................................... 23 1 36.00 0.00 17.00 19.00 0.00 ....................................TTTGTGACCGACACTAACGGCTA.......................................................................... 23 1 35.00 2.00 25.00 8.00 0.00 ....................................TTTGGGACCGACACTAACGGGG........................................................................... 22 1 33.00 0.00 0.00 33.00 0.00 ......................................TGTGACCGACACTAACGGGT........................................................................... 20 1 33.00 0.00 19.00 14.00 0.00 ....................................TTTGTGACCGACACTACCGGGC........................................................................... 22 1 32.00 0.00 0.00 32.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	scf7180000396371:1256524-1256637 +	64.59	AGTTTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTG------TTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG GTTTTTGAAGACAGA----ATGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTATTTTACAGGATTTA-----CAGGATTACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAA------------- Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	chrXR_group6:10040179-10040309 -	75.11	AGT----TTTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG CCTGGCACCTGGAACCTGGTCCCGTGCTGCAGTTTCATTTTGTGACCGACACTAACGGGTAATGG-CTGGCCGC-AGGACTACTCGTTTTTGCGATCACA-ATACTGAAATTGCAGCAACGAGCAGCGAAACTG Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ......................................TTTGTGACCGACACTAACGGGT.......................................................................... 22 1 45012.00 3297.00 8.00 41522.00 185.00 ......................................TTTGTGACCGACACTAACGGGTA......................................................................... 23 1 6009.00 130.00 1.00 5856.00 22.00 ......................................TTTGTGACCGACACTAACGGG........................................................................... 21 1 994.00 40.00 0.00 937.00 17.00 ......................................TTTGTGACCGACACTAACGGGTAA........................................................................ 24 1 700.00 15.00 0.00 685.00 0.00 ......................................TTTGTGACCGACACTAACGGGC.......................................................................... 22 1 666.00 17.00 0.00 641.00 8.00 ......................................TTTGTGACCGACACTAACG............................................................................. 19 1 542.00 0.00 0.00 542.00 0.00 ......................................TTTGTGACCGACACTAACGGGA.......................................................................... 22 1 483.00 20.00 0.00 462.00 1.00 ......................................TTTGTGACCGACACTAACGG............................................................................ 20 1 380.00 19.00 0.00 354.00 7.00 .......................................TTGTGACCGACACTAACGGGT.......................................................................... 21 1 333.00 33.00 0.00 299.00 1.00 ......................................TTTGTGACCGACACTAACGGGTAT........................................................................ 24 1 286.00 18.00 0.00 268.00 0.00 ......................................TTTGTGACCGACACTACCGGGT.......................................................................... 22 1 228.00 1.00 0.00 227.00 0.00 ......................................TTTGTGACCGACACTAACGGGTT......................................................................... 23 1 204.00 1.00 0.00 198.00 5.00 ......................................TTTGTGACCGACACTAACGGGG.......................................................................... 22 1 168.00 1.00 1.00 166.00 0.00 ......................................TTCGTGACCGACACTAACGGGT.......................................................................... 22 1 138.00 6.00 0.00 131.00 1.00 ......................................TTAGTGACCGACACTAACGGGT.......................................................................... 22 1 121.00 0.00 0.00 121.00 0.00 ......................................TTTGTGACCGACACTAACAGGT.......................................................................... 22 1 109.00 2.00 0.00 107.00 0.00 ......................................TTGGTGACCGACACTAACGGGT.......................................................................... 22 1 92.00 1.00 0.00 91.00 0.00 ......................................TTTGGGACCGACACTAACGGGT.......................................................................... 22 1 71.00 1.00 0.00 69.00 1.00 ......................................TTTGTGACTGACACTAACGGGT.......................................................................... 22 1 69.00 2.00 0.00 67.00 0.00 ......................................TTTGCGACCGACACTAACGGGT.......................................................................... 22 1 69.00 4.00 0.00 64.00 1.00 ......................................TTTGTGACCGACACTAACGGGCA......................................................................... 23 1 67.00 0.00 0.00 67.00 0.00 ......................................TTTGTGACCGACACTAACGT............................................................................ 20 1 67.00 9.00 0.00 57.00 1.00 ......................................TTTGTGACCGACACTCACGGGT.......................................................................... 22 1 65.00 0.00 0.00 65.00 0.00 ......................................TTTGTGACCGACACTAACGGCT.......................................................................... 22 1 65.00 0.00 0.00 65.00 0.00 ......................................TGTGTGACCGACACTAACGGGT.......................................................................... 22 1 64.00 0.00 0.00 64.00 0.00 ......................................TTTGTGGCCGACACTAACGGGT.......................................................................... 22 1 63.00 4.00 0.00 59.00 0.00 ......................................TTTGTGACCGACACTAACGGGTC......................................................................... 23 1 62.00 3.00 0.00 57.00 2.00 ......................................TTTGTGACCGACACTAGCGGGT.......................................................................... 22 1 58.00 5.00 0.00 53.00 0.00 ......................................TTTGTGACCGACACTAACGCGT.......................................................................... 22 1 58.00 1.00 0.00 57.00 0.00 ......................................TTTGTGACAGACACTAACGGGT.......................................................................... 22 1 57.00 1.00 0.00 56.00 0.00 ......................................CTTGTGACCGACACTAACGGGT.......................................................................... 22 1 56.00 6.00 0.00 50.00 0.00 ......................................TTTGTGACCGACACTAACGAGT.......................................................................... 22 1 54.00 0.00 0.00 54.00 0.00 ......................................TTTGAGACCGACACTAACGGGT.......................................................................... 22 1 53.00 0.00 0.00 53.00 0.00 ......................................TTTGTGACCGACACTAACGTGT.......................................................................... 22 1 52.00 0.00 0.00 51.00 1.00 ......................................TTTGTGACCGCCACTAACGGGT.......................................................................... 22 1 52.00 1.00 0.00 51.00 0.00 ......................................TTTGTGACCGACAATAACGGGT.......................................................................... 22 1 52.00 0.00 0.00 52.00 0.00 ......................................TTTGTGACCGACCCTAACGGGT.......................................................................... 22 1 48.00 1.00 0.00 47.00 0.00 ......................................TTTGTGACCGACGCTAACGGGT.......................................................................... 22 1 48.00 0.00 0.00 47.00 1.00 .......................................TTGTGACCGACACTAACGGGTA......................................................................... 22 1 47.00 3.00 0.00 44.00 0.00 ..................................................................................CTCGTTTTTGCGATCACA-ATACT............................ 23 1 44.00 2.00 0.00 42.00 0.00 ......................................TTTGTGACCGACACTAACCGGT.......................................................................... 22 1 43.00 0.00 0.00 43.00 0.00 ......................................TTTGTGACCGACACTAAAGGGT.......................................................................... 22 1 43.00 2.00 0.00 41.00 0.00 ......................................TTTGTGACCGACACTAATGGGT.......................................................................... 22 1 40.00 0.00 0.00 40.00 0.00 ......................................TTTGTGACCGACACTAACGGT........................................................................... 21 1 39.00 4.00 0.00 35.00 0.00 ......................................TCTGTGACCGACACTAACGGGT.......................................................................... 22 1 39.00 3.00 0.00 36.00 0.00 ......................................TTTGTGACCGACACTGACGGGT.......................................................................... 22 1 38.00 1.00 0.00 37.00 0.00 ......................................TTTGTGACCGTCACTAACGGGT.......................................................................... 22 1 36.00 2.00 0.00 34.00 0.00 ......................................TTTGTGACCGACACCAACGGGT.......................................................................... 22 1 35.00 1.00 0.00 34.00 0.00 ......................................TTTATGACCGACACTAACGGGT.......................................................................... 22 1 35.00 0.00 0.00 35.00 0.00 ......................................TTTGTGACCGGCACTAACGGGT.......................................................................... 22 1 32.00 3.00 0.00 29.00 0.00 ......................................TTTGTGACCGACTCTAACGGGT.......................................................................... 22 1 32.00 0.00 0.00 32.00 0.00 ......................................TTTGTGACCGACACTAACGGTT.......................................................................... 22 1 31.00 0.00 0.00 31.00 0.00 .....................................CTTTGTGACCGACACTAACGGGT.......................................................................... 23 1 31.00 2.00 0.00 29.00 0.00 ......................................TTTGTGACCGACATTAACGGGT.......................................................................... 22 1 29.00 0.00 0.00 29.00 0.00 ......................................TTTGTAACCGACACTAACGGGT.......................................................................... 22 1 29.00 2.00 0.00 27.00 0.00 ......................................TTTGTGAACGACACTAACGGGT.......................................................................... 22 1 28.00 2.00 0.00 26.00 0.00 ......................................TTTGTGACCAACACTAACGGGT.......................................................................... 22 1 28.00 2.00 0.00 26.00 0.00 ......................................TTTGTGACCGACACTACCGGGTA......................................................................... 23 1 27.00 1.00 0.00 26.00 0.00 ......................................TTTGTGACCTACACTAACGGGT.......................................................................... 22 1 27.00 4.00 0.00 23.00 0.00 ......................................TTTGTGACCGACACTAACTGGT.......................................................................... 22 1 26.00 2.00 0.00 24.00 0.00 ......................................TTTGTTACCGACACTAACGGGT.......................................................................... 22 1 26.00 3.00 0.00 23.00 0.00 ......................................TTTGTGACCGACACTAACGGAT.......................................................................... 22 1 25.00 0.00 0.00 25.00 0.00 ......................................TTTGTGACCGACACTACCGGGC.......................................................................... 22 1 24.00 1.00 0.00 23.00 0.00 ......................................ATTGTGACCGACACTAACGGGT.......................................................................... 22 1 24.00 1.00 0.00 23.00 0.00 ......................................TTTGTGACCGATACTAACGGGT.......................................................................... 22 1 24.00 0.00 0.00 24.00 0.00 ......................................TTTGTGACCGACACTATCGGGT.......................................................................... 22 1 22.00 1.00 0.00 21.00 0.00 ......................................TTTGTCACCGACACTAACGGGT.......................................................................... 22 1 22.00 0.00 0.00 22.00 0.00 ......................................TTAGTGACCGACACTAACGGGTA......................................................................... 23 1 21.00 0.00 0.00 21.00 0.00 ......................................TTTGTGACCCACACTAACGGGT.......................................................................... 22 1 21.00 2.00 0.00 19.00 0.00 ......................................TTTGTGATCGACACTAACGGGT.......................................................................... 22 1 21.00 1.00 0.00 20.00 0.00 ......................................TTTGTGACCGACACTAACGGGTAAA....................................................................... 25 1 20.00 0.00 0.00 20.00 0.00 ......................................TTTGTGACCGACACTAACGGGTTT........................................................................ 24 1 20.00 0.00 0.00 20.00 0.00 ......................................TTTCTGACCGACACTAACGGGT.......................................................................... 22 1 20.00 1.00 0.00 19.00 0.00 ......................................TTTGTGACCGACACTTACGGGT.......................................................................... 22 1 19.00 1.00 0.00 18.00 0.00 ......................................TTTTTGACCGACACTAACGGGT.......................................................................... 22 1 19.00 4.00 0.00 15.00 0.00 ......................................TTTGTGACCGAAACTAACGGGT.......................................................................... 22 1 17.00 2.00 0.00 15.00 0.00 ......................................TTTGTGACCGACACTAACGCGC.......................................................................... 22 1 17.00 0.00 0.00 17.00 0.00 ......................................TTCGTGACCGACACTAACGGGTA......................................................................... 23 1 16.00 0.00 0.00 16.00 0.00 ......................................TTTGTGTCCGACACTAACGGGT.......................................................................... 22 1 16.00 1.00 0.00 15.00 0.00 ......................................TTTGTGACCGACACTAACAGGTA......................................................................... 23 1 16.00 0.00 0.00 16.00 0.00 ......................................TTTGTGACCGACACTACCGGG........................................................................... 21 1 15.00 0.00 0.00 15.00 0.00 ......................................TGGGTGACCGACACTAACGGGT.......................................................................... 22 1 15.00 0.00 0.00 15.00 0.00 ......................................TTTGTGACCGACACTAACGGA........................................................................... 21 1 14.00 0.00 0.00 14.00 0.00 ......................................TTTGTGACCGACACTAACGGGGA......................................................................... 23 1 14.00 0.00 0.00 14.00 0.00 ......................................TTTGTGACCGACACTAAGGGGT.......................................................................... 22 1 14.00 2.00 0.00 12.00 0.00 ........................................TGTGACCGACACTAACGGGT.......................................................................... 20 1 14.00 3.00 0.00 10.00 1.00 ......................................TGTGTGACCGACACTAACGGGC.......................................................................... 22 1 14.00 0.00 0.00 14.00 0.00 ......................................TTGGTGACCGACACTAACGGGC.......................................................................... 22 1 13.00 0.00 0.00 13.00 0.00 ......................................TTTGTGACCGACACTAACGGGAA......................................................................... 23 1 13.00 0.00 0.00 13.00 0.00 ......................................TTTGTGACCGAGACTAACGGGT.......................................................................... 22 1 13.00 1.00 0.00 12.00 0.00 ......................................GTTGTGACCGACACTAACGGGT.......................................................................... 22 1 13.00 0.00 0.00 13.00 0.00 ......................................TTTGTGACTGACACTAACGGGTA......................................................................... 23 1 12.00 0.00 0.00 12.00 0.00 ......................................TTTGTGACCGACACTCACGGGC.......................................................................... 22 1 12.00 0.00 0.00 12.00 0.00 ......................................TTTGAGACCGACACTAACGGGG.......................................................................... 22 1 11.00 0.00 0.00 11.00 0.00 ......................................TTTGTGACCGACACTAAAGGGC.......................................................................... 22 1 11.00 0.00 0.00 11.00 0.00 ......................................TGTGTGACCGACACTAACGGGTA......................................................................... 23 1 11.00 0.00 0.00 11.00 0.00 ......................................TTTGTGACCGACACGAACGGGT.......................................................................... 22 1 11.00 0.00 0.00 11.00 0.00 ......................................TTTGTGACCGACGCTAACGGGTA......................................................................... 23 1 10.00 0.00 0.00 10.00 0.00 ......................................TTTGTGACCGCCACTACCGGGT.......................................................................... 22 1 10.00 0.00 0.00 10.00 0.00 ......................................TTTGTGACCGCCACTAACGGGTA......................................................................... 23 1 10.00 0.00 0.00 10.00 0.00

droPer1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
2	super_61:320241-320372 -	74.7	AGTT-----TTGGTGACGAATCCTGTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGGCCGCCAGGATTACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAACTCAACGAAATTG ACCTGGCACCTGGGACCTGGTCCCGTGCTGCAGTTTCATTTTGTGACCGACACTAACGGGTAATGG-CTGGCCGC-AGGACTACTCGTTTTTGCGATCACA-ATACTGAAATTGCAGCAACGAGCAGCGAAACTG Size Hit Count Total Norm V111 Male body V042 Embryo V050 Head V057 Head M021 Embryo .......................................TTTGTGACCGACACTAACGGGT.......................................................................... 22 1 97037.00 1373.00 2.00 44995.00 50639.00 28.00 .......................................TTTGTGACCGACACTAACGGGTA......................................................................... 23 1 11678.00 75.00 1.00 7636.00 3965.00 1.00 .......................................TTTGTGACCGACACTAACGGGC.......................................................................... 22 1 2038.00 8.00 0.00 691.00 1336.00 3.00 .......................................TTTGTGACCGACACTAACGGG........................................................................... 21 1 1872.00 6.00 0.00 1003.00 855.00 8.00 .......................................TTTGTGACCGACACTAACGGGTAA........................................................................ 24 1 1519.00 8.00 0.00 985.00 526.00 0.00 .......................................TTTGTGACCGACACTAACGGGA.......................................................................... 22 1 1196.00 16.00 0.00 506.00 674.00 0.00 .......................................TTTGTGACCGACACTAACGGGTAT........................................................................ 24 1 837.00 6.00 0.00 422.00 409.00 0.00 .......................................TTTGTGACCGACACTAACG............................................................................. 19 1 597.00 0.00 0.00 307.00 290.00 0.00 .......................................TTTGTGACCGACACTAACGG............................................................................ 20 1 462.00 4.00 0.00 238.00 220.00 0.00 .......................................TTTGTGACCGACACTAACGGGG.......................................................................... 22 1 434.00 3.00 0.00 109.00 321.00 1.00 .......................................TTTGTGACCGACACTACCGGGT.......................................................................... 22 1 413.00 1.00 0.00 155.00 257.00 0.00 .......................................TTTGGGACCGACACTAACGGGT.......................................................................... 22 1 402.00 0.00 0.00 31.00 371.00 0.00 ........................................TTGTGACCGACACTAACGGGT.......................................................................... 21 1 371.00 9.00 1.00 173.00 188.00 0.00 .......................................TTTGTGACCGACACTAACGGGTT......................................................................... 23 1 277.00 2.00 0.00 152.00 123.00 0.00 .......................................TTTGTCACCGACACTAACGGGT.......................................................................... 22 1 249.00 1.00 0.00 163.00 85.00 0.00 .......................................TTGGTGACCGACACTAACGGGT.......................................................................... 22 1 245.00 0.00 0.00 25.00 220.00 0.00 .......................................TTTGTGACCGACACTAACAGGT.......................................................................... 22 1 238.00 2.00 0.00 160.00 76.00 0.00 .......................................TTTGTGACCGACACTAACGCGT.......................................................................... 22 1 214.00 0.00 0.00 79.00 135.00 0.00 .......................................TTTGAGACCGACACTAACGGGT.......................................................................... 22 1 213.00 0.00 0.00 48.00 165.00 0.00 .......................................TTTGTGACCGACTCTAACGGGT.......................................................................... 22 1 200.00 1.00 0.00 21.00 178.00 0.00 .......................................TTTGTGACTGACACTAACGGGT.......................................................................... 22 1 188.00 1.00 0.00 74.00 113.00 0.00 .......................................TTTGTGACCGACACTCACGGGT.......................................................................... 22 1 186.00 0.00 0.00 68.00 118.00 0.00 .......................................TGTGTGACCGACACTAACGGGT.......................................................................... 22 1 178.00 0.00 0.00 22.00 156.00 0.00 .......................................TTTGTGACCGACACTAACGGCT.......................................................................... 22 1 175.00 0.00 0.00 54.00 121.00 0.00 .......................................TTTGTGACCGACGCTAACGGGT.......................................................................... 22 1 174.00 2.00 0.00 60.00 112.00 0.00 .......................................TTTGTGACCGGCACTAACGGGT.......................................................................... 22 1 170.00 0.00 0.00 37.00 133.00 0.00 .......................................TTTGTGACCGACAATAACGGGT.......................................................................... 22 1 166.00 2.00 0.00 54.00 110.00 0.00 .......................................TTTGTAACCGACACTAACGGGT.......................................................................... 22 1 164.00 1.00 0.00 129.00 34.00 0.00 .......................................CTTGTGACCGACACTAACGGGT.......................................................................... 22 1 163.00 3.00 0.00 46.00 114.00 0.00 .......................................TTTGTGACCGACACTAACGTGT.......................................................................... 22 1 161.00 0.00 0.00 47.00 114.00 0.00 .......................................TTTGTGACCGACACTAACGGGCA......................................................................... 23 1 160.00 1.00 0.00 93.00 66.00 0.00 .......................................TTTGTGACCGACACTAACCGGT.......................................................................... 22 1 160.00 1.00 0.00 54.00 105.00 0.00 .......................................TTTGCGACCGACACTAACGGGT.......................................................................... 22 1 155.00 2.00 0.00 60.00 93.00 0.00 .......................................TTTGTGACAGACACTAACGGGT.......................................................................... 22 1 155.00 0.00 0.00 40.00 115.00 0.00 .......................................TTTGTGACCGACACTAACGGTT.......................................................................... 22 1 144.00 1.00 0.00 31.00 112.00 0.00 .......................................TTTGTGGCCGACACTAACGGGT.......................................................................... 22 1 140.00 0.00 0.00 64.00 76.00 0.00 .......................................TTTGTGACCGCCACTAACGGGT.......................................................................... 22 1 138.00 1.00 0.00 45.00 92.00 0.00 .......................................TTTGTGACCGACCCTAACGGGT.......................................................................... 22 1 122.00 0.00 0.00 37.00 85.00 0.00 .......................................TTTGTGACCGACACTAACGGGTC......................................................................... 23 1 122.00 0.00 0.00 43.00 79.00 0.00 .......................................TTTGTGACCGACACTAACGAGT.......................................................................... 22 1 117.00 0.00 0.00 85.00 32.00 0.00 .......................................TTTGTGACCGACACTAGCGGGT.......................................................................... 22 1 107.00 0.00 0.00 45.00 62.00 0.00 .......................................TTTGTGACCGACACTAAAGGGT.......................................................................... 22 1 105.00 0.00 0.00 46.00 59.00 0.00 .......................................TTTGTGACCGACACTGACGGGT.......................................................................... 22 1 105.00 1.00 0.00 32.00 72.00 0.00 .......................................TTTGTGACCAACACTAACGGGT.......................................................................... 22 1 104.00 1.00 0.00 48.00 55.00 0.00 .......................................TTTGTGACCGACACTAACTGGT.......................................................................... 22 1 102.00 1.00 0.00 37.00 64.00 0.00 .......................................TTTGTGAACGACACTAACGGGT.......................................................................... 22 1 100.00 0.00 0.00 33.00 67.00 0.00 .......................................TTTGTGACCGTCACTAACGGGT.......................................................................... 22 1 95.00 0.00 0.00 15.00 80.00 0.00 ......................................CTTTGTGACCGACACTAACGGGT.......................................................................... 23 1 91.00 0.00 0.00 39.00 52.00 0.00 .......................................TTTGTGACCGACACTATCGGGT.......................................................................... 22 1 88.00 0.00 0.00 12.00 76.00 0.00 .......................................TTTGTGACCGACACTAATGGGT.......................................................................... 22 1 88.00 0.00 0.00 30.00 58.00 0.00 .......................................TTTGTTACCGACACTAACGGGT.......................................................................... 22 1 86.00 2.00 0.00 46.00 38.00 0.00 .......................................TTTGTGATCGACACTAACGGGT.......................................................................... 22 1 85.00 2.00 0.00 31.00 52.00 0.00 .......................................TTTGTGACCTACACTAACGGGT.......................................................................... 22 1 80.00 0.00 0.00 24.00 56.00 0.00 .......................................TTTGTGACCGACACTAACGT............................................................................ 20 1 79.00 1.00 0.00 19.00 59.00 0.00 .......................................TTTGTGACCGACACTACCGGGC.......................................................................... 22 1 77.00 0.00 0.00 23.00 54.00 0.00 .......................................TTTGTGACCGACACTAACGGT........................................................................... 21 1 76.00 0.00 0.00 36.00 40.00 0.00 .......................................TTTGTGACCCACACTAACGGGT.......................................................................... 22 1 76.00 0.00 0.00 18.00 58.00 0.00 .......................................TTTGTGACCGACACCAACGGGT.......................................................................... 22 1 75.00 2.00 0.00 33.00 40.00 0.00 .......................................TTTATGACCGACACTAACGGGT.......................................................................... 22 1 74.00 1.00 0.00 38.00 35.00 0.00 .......................................TTTGTGACCGATACTAACGGGT.......................................................................... 22 1 74.00 2.00 0.00 28.00 44.00 0.00 .......................................TTCGTGACCGACACTAACGGGT.......................................................................... 22 1 74.00 0.00 0.00 26.00 48.00 0.00 .......................................TTTGTGACCGACATTAACGGGT.......................................................................... 22 1 71.00 0.00 0.00 22.00 49.00 0.00 .......................................TCTGTGACCGACACTAACGGGT.......................................................................... 22 1 69.00 0.00 0.00 29.00 40.00 0.00 ...................................................................................CTCGTTTTTGCGATCACA-ATACT............................ 23 1 67.00 1.00 0.00 21.00 45.00 0.00 .......................................TTGGGGACCGACACTAACGGGT.......................................................................... 22 1 66.00 0.00 0.00 5.00 61.00 0.00 .......................................TTTGTGACCGACACTAACGGAT.......................................................................... 22 1 63.00 0.00 0.00 40.00 23.00 0.00 .......................................TTTGTGAGCGACACTAACGGGT.......................................................................... 22 1 63.00 1.00 0.00 13.00 49.00 0.00 .......................................TTTCTGACCGACACTAACGGGT.......................................................................... 22 1 62.00 0.00 0.00 15.00 47.00 0.00 .......................................TTTGTGACCGACACTAACGGGTTT........................................................................ 24 1 59.00 0.00 0.00 24.00 35.00 0.00 .......................................GTTGTGACCGACACTAACGGGT.......................................................................... 22 1 58.00 0.00 0.00 15.00 43.00 0.00 .......................................TTTGTGACCGACTCTAACGGGC.......................................................................... 22 1 58.00 0.00 0.00 12.00 46.00 0.00 .......................................TTTGTGACCGACACTAACGCGC.......................................................................... 22 1 55.00 0.00 0.00 27.00 28.00 0.00 .......................................TTTGTGACCGACACGAACGGGT.......................................................................... 22 1 55.00 0.00 0.00 4.00 51.00 0.00 .......................................TTTGTGACCGACACTAACGGGTAC........................................................................ 24 1 53.00 0.00 0.00 29.00 24.00 0.00 .......................................TTTGTGACCGAAACTAACGGGT.......................................................................... 22 1 51.00 0.00 0.00 19.00 32.00 0.00 ........................................TTGTGACCGACACTAACGGGTA......................................................................... 22 1 48.00 0.00 0.00 31.00 17.00 0.00 .......................................TTTGGGACCGACACTAACGGGTA......................................................................... 23 1 47.00 0.00 0.00 11.00 36.00 0.00 .......................................TTAGTGACCGACACTAACGGGT.......................................................................... 22 1 47.00 0.00 0.00 9.00 38.00 0.00 .......................................TTTGTGACCGACACTAACGGGAA......................................................................... 23 1 44.00 1.00 0.00 27.00 16.00 0.00 .......................................TTTGGGACCGACACTAACGGGC.......................................................................... 22 1 43.00 0.00 0.00 5.00 38.00 0.00 .......................................ATTGTGACCGACACTAACGGGT.......................................................................... 22 1 43.00 0.00 0.00 11.00 32.00 0.00 .........................................TGTGACCGACACTAACGGGT.......................................................................... 20 1 43.00 0.00 0.00 27.00 16.00 0.00 .......................................TTTGTGACCGACACTTACGGGT.......................................................................... 22 1 41.00 0.00 0.00 9.00 32.00 0.00 .......................................TGGGTGACCGACACTAACGGGT.......................................................................... 22 1 41.00 0.00 0.00 10.00 31.00 0.00 .......................................TTTGTGTCCGACACTAACGGGT.......................................................................... 22 1 41.00 1.00 0.00 19.00 21.00 0.00 .......................................TTTGCGACCGACACTAACGGGC.......................................................................... 22 1 41.00 0.00 0.00 9.00 32.00 0.00 .......................................TTTGTGACCGACACTAAGGGGT.......................................................................... 22 1 40.00 0.00 0.00 10.00 30.00 0.00 .......................................TGTGTGACCGACACTAACGGGC.......................................................................... 22 1 39.00 0.00 0.00 10.00 29.00 0.00 .......................................TTTGTGACCGACACTACCGGGTA......................................................................... 23 1 38.00 0.00 0.00 16.00 22.00 0.00 .......................................TTTGTGACCGACACTAACGGTC.......................................................................... 22 1 37.00 0.00 0.00 9.00 28.00 0.00 .......................................TTTGTGACAGACACTAACGGGG.......................................................................... 22 1 36.00 0.00 0.00 9.00 27.00 0.00 .......................................TTTTTGACCGACACTAACGGGT.......................................................................... 22 1 35.00 1.00 0.00 14.00 20.00 0.00 .......................................TTGGTGACCGACACTAACGGGC.......................................................................... 22 1 35.00 0.00 0.00 9.00 26.00 0.00 .......................................TTTGTGCCCGACACTAACGGGT.......................................................................... 22 1 32.00 0.00 0.00 7.00 25.00 0.00 .......................................TTTGTGACTGACACTAACGGGTA......................................................................... 23 1 32.00 1.00 0.00 22.00 9.00 0.00 .......................................TATGTGACCGACACTAACGGGT.......................................................................... 22 1 31.00 0.00 0.00 10.00 21.00 0.00 .......................................TTTGTGACGGACACTAACGGGT.......................................................................... 22 1 31.00 0.00 0.00 6.00 25.00 0.00 .......................................TTTGTGACCGACACTAACGGGGA......................................................................... 23 1 30.00 1.00 0.00 15.00 14.00 0.00 .......................................TTTGAGACCGACACTAACGGGC.......................................................................... 22 1 28.00 0.00 0.00 5.00 23.00 0.00 .......................................TTTGTGACCGACACTACCGCGT.......................................................................... 22 1 28.00 0.00 0.00 7.00 21.00 0.00 .......................................TTTGTGACCGACACTAACAGGTA......................................................................... 23 1 27.00 0.00 0.00 20.00 7.00 0.00

droWil1 - 1 hit found