dme-mir-263a- 12- and 20-way alignments

dme-mir-263a	chr2L:11953410-11953503 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 11953463-11953486
   star strand at position 11953424-11953445
   mutations
   read mismatches
   coordinate mismatch (possible incorrect ortholog)

12-way Fast Statistical Aligner re-alignment (From MAFs)

Species	Coordinate	Alignment
dm3	chr2L:11953395-11953518 -	CCATCT---A----ATGG-----------T-ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAA
droSim1	chr2L:11760450-11760573 -	CCATCT---A----ATGG-----------T-ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAA
droSec1	super_16:152684-152807 -	CCTTCT---A----ATGG-----------T-ATATAGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAG--TGAA
droYak2	chr2L:8374818-8374940 -	CCAGCT---G----CTGG-----------T-ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAA---TGAA
droEre2	scaffold_4929:13456433-13456555 +	CCATCT---G----ATGG-----------T-GTATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTGA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCGAA---TGAA
droAna3	scaffold_12943:2289705-2289820 +	-----------------G-----------T-TTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCAAAAAAGTGAA
dp4	chr4_group3:7322788-7322905 +	ACTCAT---A----AGTG-----------T-ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTT-TCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAA
droPer1	super_1:8768281-8768398 +	ACTCAT---A----AGTG-----------T-ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTT-TCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAA
droWil1	scaffold_180708:2657731-2657854 -	GCTTTC---G----ATTG-----------G-TTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCATACAGA---ACAT
droVir3	scaffold_12963:13235085-13235209 +	CA-TCT---GCTTAATGT-------TGCTTGCTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTACAAC-------
droMoj3	scaffold_6500:16780716-16780835 +	AGTT-T---GTT--T----------TCGTTGTTTCGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTCTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTTCAAC-------
droGri2	scaffold_15126:6621360-6621491 -	ATTTTTTTCA----AGTGATTTTTCTTGTTGTTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTGCAGA-------

20-way Fast Statistical Aligner re-alignment (Top LASTZ hits)

Species	Coordinate	Lastz Id	Alignment
dm3	chr2L:11953395-11953518 -	NA	CCA--TCTAA--------T-----------------G-----------------GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAA---------ACATCCAAA--AT----GAA
droSim1	chr2L:11760450-11760573 -	3	CCA--TCTAA--------T-----------------G-----------------GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAA---------ACATCCAAA--AT----GAA
droSec1	super_16:152684-152807 -	1	CCT--TCTAA--------T-----------------G-----------------GTATATAGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAA---------ACATCCAAA--GT----GAA
droYak2	chr2L:8374818-8374940 -	1	CCA--GCTGC--------T-----------------G-----------------GTATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAA---------ACATCCAAA---T----GAA
droEre2	scaffold_4929:13456433-13456555 +	1	CCA--TCTGA--------T-----------------G-----------------GTGTATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTGATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAA---------ACATCCGAA---T----GAA
droEug1	scf7180000409122:345832-345952 -	1	GAA--TCTTG--------T-----------------GAAG-------------TGTTCAATCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAA---------ACATCCA-------------
droBia1	scf7180000302422:1067961-1068074 +	1	CGA--T------------------------------GAA---------------GT-----AATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTGATTT-TATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAACAAA---------ACAACCACA---T----GAA
droTak1	scf7180000415863:297062-297179 +	2	ATT--TTCAA--------T-----------------C--G-------------TGT--A---ATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTATACA-ACCCGTGATCTCTTAGTGGCATTTATGGTGCGGGAATAAA---------ACATCAAAA---------AG
droEle1	scf7180000491028:3219004-3219131 +	2	CTAGTTCTTG--------------------------AAAG-------------TGTAACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTCATACC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAA---------ACATCAAAA---T----CAA
droRho1	scf7180000779410:469683-469808 -	1	CAA--TCTTT--------------------------AAAG-------------TGTTACTACATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTATACC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAA---------ACATCCAAA---T----GAA
droFic1	scf7180000453936:232048-232166 +	1	TAA--TCTTG--------A-----------------CAA---------------GTCACTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAG---------ACATC-------------AA
droKik1	scf7180000301476:605762-605889 +	1	AGA--TCTTG--------C-----------------AGAG-------------TGTTAAACCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTCTAAACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATTGA---------ACATCCAAT--CA----GAA
droAna3	scaffold_12943:2289700-2289819 +	1	ACA--A------------------------------------------------GTTTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAA---------ACATCAAAAAAGT----GA-
droBip1	scf7180000396728:1008481-1008601 -	1	------------------------------------------------------GTTTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAA---------ACATCAAAAGAGTGAATACA
dp4	chr4_group3:7322788-7322905 +	1	ACT--CATAA-----------------------------G-------------TGTATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT-------------CATCTCAA---T----CAA
droPer1	super_1:8768281-8768398 +	1	ACT--CATAA-----------------------------G-------------TGTATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCAATACA-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT-------------CATCTCAA---T----CAA
droWil1	scaffold_180708:2657721-2657853 -	3	CTT--TCGAT--------T-----------------G-----------------GT-TCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACACACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCATACAGAACATCCGAC--AT----CAA
droVir3	scaffold_12963:13235091-13235216 +	1	CTT--AATGT--------T-----------------G-CT-------------TGC-TCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATA--ACACGCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATT---------ACGTACAACAAAT----GAA
droMoj3	scaffold_6500:16780722-16780842 +	3	TTT--TCG-T-------------------------------------------TGTT-TCGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTT-CTA-ACACGCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATT---------ACGTTCAACAACT----GAA
droGri2	scaffold_15126:6621358-6621517 -	2	CTA--CCTGAATTTCTGCTGGGTAAGTTATTTTTTTCAAGTGATTTTTCTTGTTGT-TCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAACAC--GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATT---------ACGTGCAGA---------AA

[View All Possible Orthologs]

Original 12-way multiz alignment with reads super-imposed

Species

Alignment

dm3

CCATCT---A----ATGG-----------T-ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAA

Size

Hit Count

Total Norm

droSim1

CCATCT---A----ATGG-----------T-ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAA--TGAA	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	417000.00	24604.00	130809.00	132054.00	129533.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	119135.00	1977.00	63939.00	42585.00	10634.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	20979.00	1516.00	12884.00	5475.00	1104.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	20806.00	154.00	11636.00	6438.00	2578.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	13285.00	1804.00	8852.00	1897.00	732.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	12164.00	24.00	9501.00	2565.00	74.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	3699.00	150.00	358.00	102.00	3089.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	3558.00	318.00	1709.00	1338.00	193.00
...................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................	25	1	2726.00	3.00	1284.00	953.00	486.00
...................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................	26	1	2067.00	1.00	1146.00	685.00	235.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	1515.00	151.00	1032.00	301.00	31.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	1181.00	2.00	355.00	205.00	619.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	1028.00	4.00	382.00	207.00	435.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	734.00	0.00	220.00	129.00	385.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	679.00	31.00	156.00	37.00	455.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	634.00	27.00	227.00	205.00	175.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	610.00	3.00	182.00	128.00	297.00
.......................................................GCACTGGAAGAATTCACGGG........................................................................	20	1	555.00	3.00	180.00	160.00	212.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	531.00	9.00	232.00	188.00	102.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	525.00	4.00	146.00	95.00	280.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	513.00	19.00	180.00	193.00	121.00
...................................................AATGGCACTGGAAGAATTCACGGGAT......................................................................	26	1	488.00	0.00	293.00	176.00	19.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	430.00	17.00	240.00	138.00	35.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	428.00	20.00	145.00	133.00	130.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	427.00	9.00	213.00	203.00	2.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	401.00	14.00	108.00	90.00	189.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	337.00	48.00	105.00	105.00	79.00
...................................................AATGTCACTGGAAGAATTCAC...........................................................................	21	1	324.00	0.00	259.00	35.00	30.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	315.00	26.00	79.00	111.00	99.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	303.00	20.00	146.00	106.00	31.00
...................................................AATTGCACTGGAAGAATTCACGG.........................................................................	23	1	291.00	0.00	183.00	54.00	54.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	290.00	21.00	76.00	80.00	113.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	284.00	37.00	77.00	93.00	77.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	282.00	3.00	84.00	105.00	90.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	280.00	7.00	83.00	49.00	141.00
...................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................	25	1	276.00	0.00	193.00	76.00	7.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	259.00	230.00	9.00	7.00	13.00
...................................................AATGTCACTGGAAGAATTCACG..........................................................................	22	1	249.00	0.00	197.00	36.00	16.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	235.00	96.00	50.00	36.00	53.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	233.00	207.00	10.00	5.00	11.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	228.00	94.00	42.00	46.00	46.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	223.00	19.00	63.00	75.00	66.00
....................................................ATGGCACTGGAAGAATTCACGG.........................................................................	22	1	221.00	0.00	135.00	83.00	3.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	212.00	32.00	62.00	38.00	80.00
...................................................AATGGCACTGAAAGAATTCACGGG........................................................................	24	1	209.00	7.00	67.00	67.00	68.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	204.00	30.00	55.00	55.00	64.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	203.00	91.00	38.00	13.00	61.00
...................................................AATGGTACTGGAAGAATTCACGGG........................................................................	24	1	203.00	10.00	57.00	51.00	85.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	201.00	61.00	30.00	85.00	25.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	186.00	93.00	28.00	22.00	43.00
...................................................AATTGCACTGGAAGAATTCACG..........................................................................	22	1	185.00	0.00	128.00	37.00	20.00
...................................................AATGGCACTGGAAGAATTTACGGG........................................................................	24	1	175.00	20.00	48.00	65.00	42.00
...................................................AATGACACTGGAAGAATTCACGGG........................................................................	24	1	167.00	13.00	45.00	47.00	62.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	158.00	43.00	41.00	37.00	37.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	157.00	1.00	111.00	44.00	1.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	155.00	18.00	50.00	47.00	40.00
...................................................AATGGCACTxGAAGAATTCACGGG........................................................................	23	1	154.00	3.00	70.00	28.00	53.00
...................................................AATGGCACTGGAxxAATTCACGGG........................................................................	22	1	154.00	0.00	44.00	43.00	67.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	152.00	1.00	106.00	41.00	4.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	149.00	61.00	18.00	52.00	18.00
.......................................................GCACTGGAAGAATTCACGG.........................................................................	19	1	149.00	0.00	73.00	56.00	20.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	148.00	3.00	95.00	49.00	1.00
...................................................AATGGCACTGGAAAAATTCACGGG........................................................................	24	1	146.00	6.00	34.00	53.00	53.00
...................................................AATTGCACTGGAAGAATTCAC...........................................................................	21	1	145.00	0.00	110.00	13.00	22.00
...................................................AATGGCACTCGAAGAATTCACGGG........................................................................	24	1	142.00	13.00	44.00	27.00	58.00
...................................................AATTGCACTGGAAGAATTCACGGGA.......................................................................	25	1	142.00	0.00	68.00	29.00	45.00
....................................................AATGCACTGGAAGAATTCACG..........................................................................	21	1	140.00	0.00	106.00	25.00	9.00
...................................................AATGTCACTGGAAGAATTCACGG.........................................................................	23	1	140.00	1.00	98.00	24.00	17.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	138.00	101.00	12.00	13.00	12.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	138.00	19.00	38.00	41.00	40.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	137.00	4.00	82.00	44.00	7.00
...................................................AATGGCACTGGAAGAATTCATGG.........................................................................	23	1	135.00	2.00	61.00	66.00	6.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	134.00	27.00	29.00	60.00	18.00
........................................................CACTGGAAGAATTCACGGG........................................................................	19	1	134.00	3.00	35.00	48.00	48.00
..............................................................................................CGTGATCTCTTAGTGGCATC.................................	20	1	132.00	1.00	70.00	12.00	49.00
...................................................AATGGCACTGTAAGAATTCACGG.........................................................................	23	1	132.00	0.00	92.00	27.00	13.00
...................................................AATGGCATTGGAAGAATTCACGGG........................................................................	24	1	132.00	16.00	43.00	33.00	40.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	131.00	24.00	44.00	21.00	42.00
...................................................AATGGGACTGGAAGAATTCACGGG........................................................................	24	1	129.00	9.00	54.00	31.00	35.00
...................................................AGTGGCACTGGAAGAATTCACGG.........................................................................	23	1	125.00	5.00	67.00	48.00	5.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	118.00	15.00	35.00	32.00	36.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	115.00	32.00	21.00	34.00	28.00
....................................................AATGCACTGGAAGAATTCACGG.........................................................................	22	1	115.00	0.00	64.00	23.00	28.00
...................................................AATGCCACTGGAAGAATTCAC...........................................................................	21	1	113.00	0.00	87.00	16.00	10.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	109.00	6.00	77.00	22.00	4.00
...................................................AATCGCACTGGAAGAATTCACGG.........................................................................	23	1	108.00	0.00	66.00	27.00	15.00
..................................................CAATGGCACTGGAAGAATTCACGGG........................................................................	25	1	107.00	22.00	24.00	25.00	36.00
...................................................AATxGCACTGGAAGAATTCACGGGA.......................................................................	24	1	104.00	0.00	66.00	20.00	18.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	103.00	51.00	11.00	24.00	17.00
...................................................AATGGCACTGGAAGAACTCACGGG........................................................................	24	1	101.00	21.00	23.00	23.00	34.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	99.00	77.00	8.00	5.00	9.00
...................................................AATGGCACTGGAAGAATTCACGGGAAA.....................................................................	27	1	97.00	0.00	27.00	37.00	33.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	96.00	19.00	25.00	31.00	21.00
...................................................AATGGCACCGGAAGAATTCACGG.........................................................................	23	1	95.00	0.00	54.00	29.00	12.00
........................................................CACTGGAAGAATTCACGG.........................................................................	18	1	94.00	0.00	38.00	43.00	13.00
...................................................AATGGCAATGGAAGAATTCACGGG........................................................................	24	1	94.00	61.00	9.00	20.00	4.00
...................................................AATGGCACTGGAAGAATTCGCGG.........................................................................	23	1	92.00	5.00	45.00	38.00	4.00
...................................................AATGGCGCTGGAAGAATTCACGG.........................................................................	23	1	91.00	2.00	44.00	38.00	7.00
...................................................AATGGCACTGGAAGAATTCACGGGTA......................................................................	26	1	91.00	0.00	53.00	29.00	9.00
...................................................AATGGCACTGGAAGAATTGACGGG........................................................................	24	1	87.00	11.00	15.00	29.00	32.00
...................................................GATGGCACTGGAAGAATTCACGG.........................................................................	23	1	86.00	2.00	49.00	30.00	5.00

droSec1

CCTTCT---A----ATGG-----------T-ATATAGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAAG--TGAA	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	220636.00	81722.00	109279.00	29635.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	82806.00	51851.00	8490.00	22465.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	72929.00	47534.00	11102.00	14293.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	59455.00	32658.00	3468.00	23329.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	25878.00	14597.00	622.00	10659.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	15845.00	10752.00	2011.00	3082.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	7070.00	2516.00	64.00	4490.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	4517.00	2375.00	1043.00	1099.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	2135.00	1493.00	146.00	496.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	1268.00	1011.00	33.00	224.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	1118.00	726.00	9.00	383.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	970.00	81.00	843.00	46.00
...................................................AATGGCACTGGAAGAATTTACGGG........................................................................	24	1	804.00	440.00	348.00	16.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	733.00	650.00	35.00	48.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	690.00	129.00	498.00	63.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	656.00	354.00	20.00	282.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	512.00	58.00	438.00	16.00
...................................................AATGGCATTGGAAGAATTCACGGG........................................................................	24	1	461.00	32.00	414.00	15.00
...................................................AATGGCACTGGAAGAATTAACG..........................................................................	22	1	438.00	398.00	2.00	38.00
...................................................AATGGCACTGGAAGAATTAACGG.........................................................................	23	1	426.00	403.00	4.00	19.00
...................................................AATGGTACTGGAAGAATTCACGGG........................................................................	24	1	418.00	33.00	373.00	12.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	411.00	161.00	196.00	54.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	403.00	96.00	284.00	23.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	387.00	234.00	5.00	148.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	369.00	204.00	95.00	70.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	357.00	207.00	109.00	41.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	356.00	286.00	2.00	68.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	341.00	25.00	12.00	304.00
...................................................AATGGCACTGGAAGAATTTACGG.........................................................................	23	1	333.00	277.00	44.00	12.00
...................................................AATGGCACTGGAAGAATTAAC...........................................................................	21	1	321.00	280.00	1.00	40.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	320.00	297.00	5.00	18.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	301.00	76.00	183.00	42.00
...................................................AATGGCACTGGAAGAATTGACGGG........................................................................	24	1	299.00	277.00	18.00	4.00
...................................................AATGGCACTGGAAGAATTTACG..........................................................................	22	1	291.00	271.00	13.00	7.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	276.00	101.00	133.00	42.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	267.00	72.00	141.00	54.00
...................................................AATGGCACTGGAAGACTTCACGGG........................................................................	24	1	266.00	123.00	113.00	30.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	260.00	69.00	168.00	23.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	233.00	79.00	106.00	48.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	232.00	87.00	121.00	24.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	229.00	98.00	110.00	21.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	229.00	66.00	142.00	21.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	224.00	61.00	145.00	18.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	216.00	54.00	145.00	17.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	215.00	136.00	54.00	25.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	214.00	63.00	131.00	20.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	211.00	56.00	125.00	30.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	209.00	74.00	98.00	37.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	209.00	66.00	108.00	35.00
...................................................AATGGCACTGGAAGAATTT.............................................................................	19	1	208.00	118.00	0.00	90.00
...................................................AATGGCACTxGAAGAATTCACGGG........................................................................	23	1	204.00	46.00	129.00	29.00
...................................................AATGGCACTGGAAGAATTTAC...........................................................................	21	1	202.00	182.00	9.00	11.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	200.00	66.00	114.00	20.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	190.00	57.00	108.00	25.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	189.00	95.00	6.00	88.00
...................................................AATGGCACTGGAAGAATTGACG..........................................................................	22	1	183.00	178.00	1.00	4.00
...................................................AATGGCACTGGAAGAATTGACGG.........................................................................	23	1	182.00	179.00	0.00	3.00
...................................................AATGGCACTCGAAGAATTCACGGG........................................................................	24	1	172.00	59.00	91.00	22.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	171.00	71.00	79.00	21.00
...................................................AATGGCACTGGAAGAATTAA............................................................................	20	1	163.00	135.00	0.00	28.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	157.00	50.00	74.00	33.00
..................................................CAATGGCACTGGAAGAATTCACGGG........................................................................	25	1	154.00	32.00	102.00	20.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	153.00	57.00	51.00	45.00
....................................................ATGGCACTGGAAGAATTCACGG.........................................................................	22	1	153.00	59.00	50.00	44.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	151.00	28.00	104.00	19.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	143.00	29.00	71.00	43.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	142.00	56.00	59.00	27.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	142.00	94.00	33.00	15.00
...................................................AATGGCACTGGAAGAATTCCCGG.........................................................................	23	1	137.00	85.00	21.00	31.00
...................................................ACTGGCACTGGAAGAATTCACGGG........................................................................	24	1	135.00	66.00	57.00	12.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	126.00	51.00	2.00	73.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	120.00	47.00	58.00	15.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	118.00	35.00	54.00	29.00
...................................................AATGGxxCTGGAAGAATTCACGGG........................................................................	22	1	118.00	8.00	106.00	4.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	118.00	28.00	69.00	21.00
...................................................AATGGCACTGGAAGAACTCACGGG........................................................................	24	1	118.00	53.00	51.00	14.00
....................................................ATGGCACTGGAAGAATTCACG..........................................................................	21	1	116.00	43.00	33.00	40.00
...................................................AATGGCACTGAAAGAATTCACGGG........................................................................	24	1	115.00	38.00	60.00	17.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	114.00	83.00	8.00	23.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	113.00	49.00	37.00	27.00
...................................................AATGGCTCTGGAAGAATTCACGGG........................................................................	24	1	112.00	15.00	92.00	5.00
...................................................AATGGCACTGGAAGAATTGAC...........................................................................	21	1	111.00	108.00	0.00	3.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	109.00	69.00	16.00	24.00
...................................................AATGACACTGGAAGAATTCACGGG........................................................................	24	1	108.00	34.00	60.00	14.00
...................................................AATTGCACTGGAAGAATTCACG..........................................................................	22	1	106.00	48.00	11.00	47.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	106.00	24.00	37.00	45.00
...................................................AATGGCACTGGAxxAATTCACGGG........................................................................	22	1	104.00	23.00	63.00	18.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	104.00	80.00	12.00	12.00
...................................................AATGGCACTGGAAGAATTCACGTT........................................................................	24	1	102.00	64.00	1.00	37.00
...................................................AATGGCACTGGAAGACTTCACG..........................................................................	22	1	101.00	77.00	10.00	14.00
...................................................AATGGCAATGGAAGAATTCACGGG........................................................................	24	1	100.00	21.00	37.00	42.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	99.00	44.00	43.00	12.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	96.00	35.00	23.00	38.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	96.00	20.00	41.00	35.00
...................................................AATGGCACTGGAACAATTCACGGG........................................................................	24	1	96.00	40.00	42.00	14.00
...................................................AATGGCACTGGAAGAATTAACGGGT.......................................................................	25	1	93.00	83.00	4.00	6.00
...................................................AATGGCACTGGAGGAATTCACGG.........................................................................	23	1	93.00	48.00	27.00	18.00
...................................................AATGGCACTGGAAAAATTCACGGG........................................................................	24	1	92.00	28.00	51.00	13.00
....................................................AATGCACTGGAAGAATTCACG..........................................................................	21	1	92.00	49.00	9.00	34.00
...................................................AATGGCCCTGGAAGAATTCACGGG........................................................................	24	1	92.00	42.00	39.00	11.00
...................................................AATGGCACTGGAAGAATTCACGGGAT......................................................................	26	1	92.00	60.00	6.00	26.00

droYak2

CCAGCT---G----CTGG-----------T-ATATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCAAA---TGAA	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	63067.00	14022.00	1470.00	17384.00	4935.00	25256.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	26580.00	603.00	2087.00	14271.00	7087.00	2532.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	23463.00	718.00	551.00	10218.00	1734.00	10242.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	18722.00	428.00	1466.00	9886.00	5342.00	1600.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	7834.00	48.00	767.00	4254.00	2622.00	143.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	3208.00	163.00	139.00	2098.00	485.00	323.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	2252.00	62.00	61.00	411.00	144.00	1574.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	2183.00	2.00	139.00	702.00	489.00	851.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	506.00	14.00	25.00	318.00	138.00	11.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	351.00	169.00	9.00	28.00	15.00	130.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	342.00	4.00	33.00	165.00	119.00	21.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	288.00	108.00	17.00	5.00	58.00	100.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	286.00	55.00	11.00	11.00	80.00	129.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	236.00	2.00	19.00	116.00	85.00	14.00
...................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................	25	1	233.00	6.00	1.00	11.00	2.00	213.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	227.00	98.00	13.00	30.00	83.00	3.00
...................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................	26	1	200.00	0.00	1.00	5.00	1.00	193.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	185.00	1.00	17.00	96.00	67.00	4.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	180.00	4.00	4.00	127.00	18.00	27.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	172.00	16.00	10.00	81.00	18.00	47.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	170.00	4.00	22.00	16.00	111.00	17.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	167.00	22.00	23.00	48.00	74.00	0.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	131.00	33.00	10.00	51.00	36.00	1.00
...................................................AATGGCACTGGCAGAATTCAC...........................................................................	21	1	127.00	5.00	16.00	1.00	100.00	5.00
...................................................AATGGCACTGGAAGCATTCAC...........................................................................	21	1	121.00	3.00	11.00	16.00	91.00	0.00
...................................................AATGGCACTGGAAGCATTCACG..........................................................................	22	1	120.00	0.00	13.00	22.00	85.00	0.00
...................................................AATGGCACTGGAAGAATTCCCGG.........................................................................	23	1	108.00	5.00	3.00	19.00	16.00	65.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	104.00	0.00	1.00	11.00	1.00	91.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	104.00	52.00	10.00	28.00	11.00	3.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	94.00	52.00	5.00	15.00	16.00	6.00
...................................................AATGGCACTGGAAGAATTCCC...........................................................................	21	1	92.00	4.00	4.00	8.00	53.00	23.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	91.00	0.00	0.00	4.00	3.00	84.00
...................................................AATGTCACTGGAAGAATTCAC...........................................................................	21	1	90.00	0.00	1.00	10.00	4.00	75.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	88.00	37.00	2.00	13.00	19.00	17.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	87.00	4.00	5.00	38.00	15.00	25.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	86.00	11.00	0.00	19.00	6.00	50.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	84.00	19.00	12.00	16.00	30.00	7.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	82.00	31.00	7.00	14.00	4.00	26.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	81.00	41.00	7.00	11.00	9.00	13.00
...................................................AATGGCACTGGAAGACTTCACG..........................................................................	22	1	81.00	0.00	4.00	8.00	69.00	0.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	80.00	1.00	0.00	28.00	0.00	51.00
...................................................AATGGCACTGGAAGCATTCA............................................................................	20	1	75.00	1.00	10.00	8.00	56.00	0.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	74.00	1.00	2.00	44.00	15.00	12.00
...................................................AATGGCACTGGCAGAATTCACGG.........................................................................	23	1	73.00	8.00	1.00	0.00	24.00	40.00
...................................................AATGTCACTGGAAGAATTCACG..........................................................................	22	1	70.00	2.00	0.00	9.00	1.00	58.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	70.00	0.00	20.00	13.00	35.00	2.00
...................................................AATGGCACTGGACGAATTCACGGG........................................................................	24	1	66.00	26.00	2.00	6.00	31.00	1.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	65.00	3.00	1.00	14.00	0.00	47.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	65.00	34.00	2.00	1.00	26.00	2.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	65.00	0.00	2.00	32.00	26.00	5.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	64.00	3.00	4.00	16.00	2.00	39.00
...................................................AATGGCACTGGCAGAATTCACG..........................................................................	22	1	64.00	1.00	10.00	3.00	38.00	12.00
...................................................AATGGCACTGGAAGACTTCAC...........................................................................	21	1	63.00	0.00	2.00	2.00	59.00	0.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	63.00	23.00	12.00	10.00	7.00	11.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	61.00	18.00	9.00	19.00	11.00	4.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	60.00	27.00	2.00	5.00	8.00	18.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	60.00	0.00	9.00	31.00	11.00	9.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	59.00	0.00	5.00	40.00	11.00	3.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	59.00	13.00	2.00	13.00	15.00	16.00
...................................................AATGGCACTGGAAGACTTCACGGG........................................................................	24	1	58.00	15.00	0.00	6.00	36.00	1.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	55.00	18.00	0.00	6.00	9.00	22.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	55.00	1.00	0.00	35.00	2.00	17.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	55.00	18.00	1.00	21.00	7.00	8.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	54.00	4.00	7.00	14.00	18.00	11.00
...................................................AATGGCACTGGAAGAATTCACGGGAT......................................................................	26	1	52.00	0.00	0.00	6.00	0.00	46.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	51.00	19.00	0.00	13.00	7.00	12.00
...................................................AATGGCACTGGCAGAATTCA............................................................................	20	1	51.00	1.00	7.00	2.00	40.00	1.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	50.00	4.00	0.00	11.00	1.00	34.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	50.00	11.00	0.00	18.00	2.00	19.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	47.00	15.00	1.00	7.00	5.00	19.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	46.00	15.00	3.00	8.00	2.00	18.00
...................................................AATGGCACTGGGAGAATTCACG..........................................................................	22	1	45.00	3.00	4.00	5.00	33.00	0.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	45.00	10.00	2.00	14.00	3.00	16.00
...................................................AATTGCACTGGAAGAATTCACG..........................................................................	22	1	45.00	0.00	0.00	10.00	2.00	33.00
...................................................AATCGCACTGGAAGAATTCACG..........................................................................	22	1	44.00	0.00	4.00	8.00	14.00	18.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	43.00	23.00	1.00	4.00	6.00	9.00
...................................................AATTGCACTGGAAGAATTCACGG.........................................................................	23	1	42.00	0.00	0.00	10.00	2.00	30.00
...................................................AATGGCACTGGAAGCATTCACGG.........................................................................	23	1	42.00	3.00	0.00	14.00	23.00	2.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	42.00	20.00	5.00	9.00	5.00	3.00
...................................................AATGGCACTGGGAGAATTCAC...........................................................................	21	2	20.50	0.50	2.50	3.00	13.50	1.00
...................................................AATTGCACTGGAAGAATTCAC...........................................................................	21	1	41.00	0.00	0.00	7.00	4.00	30.00
...................................................AATGCCACTGGAAGAATTCACG..........................................................................	22	1	41.00	0.00	1.00	14.00	5.00	21.00
...................................................AATGGCAATGGAAGAATTCACGGG........................................................................	24	1	40.00	20.00	2.00	3.00	14.00	1.00
....................................................AATGCACTGGAAGAATTCACG..........................................................................	21	1	40.00	0.00	1.00	18.00	0.00	21.00
...................................................AATGGCACTGGAAGGATTCACG..........................................................................	22	1	40.00	1.00	5.00	15.00	17.00	2.00
.......................................................GCACTGGAAGAATTCACGGG........................................................................	20	1	39.00	0.00	0.00	11.00	0.00	28.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	37.00	16.00	1.00	4.00	10.00	6.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	37.00	13.00	1.00	10.00	0.00	13.00
...................................................AATGGCACTGGACGAATTCAC...........................................................................	21	1	37.00	1.00	2.00	1.00	33.00	0.00
...................................................AATGGCACTGGAAGAATTCACGTT........................................................................	24	1	37.00	2.00	3.00	21.00	9.00	2.00
...................................................AATGGCACTGGAAGAATGCACG..........................................................................	22	1	37.00	1.00	2.00	0.00	33.00	1.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	36.00	3.00	1.00	3.00	3.00	26.00
...................................................AAGGGCACTGGAAGAATTCAC...........................................................................	21	1	36.00	1.00	4.00	1.00	30.00	0.00
...................................................AATGGCACTAGAAGAATTCACG..........................................................................	22	1	36.00	1.00	20.00	7.00	8.00	0.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	35.00	14.00	1.00	13.00	6.00	1.00
...................................................AATGGCACTGGTAGAATTCAC...........................................................................	21	1	35.00	2.00	1.00	0.00	32.00	0.00
...................................................AATGGCCCTGGAAGAATTCACGGG........................................................................	24	1	35.00	6.00	0.00	2.00	8.00	19.00
...................................................AATGGCACTGGAAGAACTCACGGG........................................................................	24	1	35.00	17.00	0.00	7.00	5.00	6.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	34.00	10.00	1.00	9.00	3.00	11.00
....................................................ATGGCACTGGAAGAATTCACGG.........................................................................	22	1	34.00	1.00	2.00	12.00	2.00	17.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	34.00	4.00	1.00	9.00	2.00	18.00

droEre2

CCATCT---G----ATGG-----------T-GTATAGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTGA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCGAA---TGAA	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	63240.00	9651.00	2374.00	5664.00	45551.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	28059.00	853.00	3090.00	243.00	23873.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	27567.00	792.00	1528.00	138.00	25109.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	22862.00	1044.00	1311.00	576.00	19931.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	10355.00	124.00	758.00	30.00	9443.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	4327.00	140.00	166.00	108.00	3913.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	3029.00	12.00	89.00	4.00	2924.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	1635.00	67.00	73.00	70.00	1425.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	1498.00	204.00	11.00	61.00	1222.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	1022.00	257.00	34.00	129.00	602.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	995.00	101.00	70.00	63.00	761.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	752.00	19.00	34.00	6.00	693.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	693.00	153.00	6.00	73.00	461.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	600.00	33.00	1.00	10.00	556.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	554.00	41.00	2.00	24.00	487.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	531.00	321.00	3.00	144.00	63.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	460.00	26.00	4.00	24.00	406.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	409.00	10.00	24.00	1.00	374.00
...................................................AATGGCACTGGAATAATTCACGGG........................................................................	24	1	372.00	34.00	2.00	23.00	313.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	349.00	27.00	1.00	18.00	303.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	317.00	7.00	30.00	1.00	279.00
...................................................AATTGCACTGGAAGAATTCAC...........................................................................	21	1	317.00	2.00	0.00	1.00	314.00
...................................................AATTGCACTGGAAGAATTCACG..........................................................................	22	1	307.00	4.00	0.00	1.00	302.00
...................................................AATGGCACTTGAAGAATTCAC...........................................................................	21	1	303.00	7.00	4.00	1.00	291.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	292.00	39.00	0.00	10.00	243.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	272.00	7.00	3.00	2.00	260.00
...................................................AATGGCACTTGAAGAATTCACG..........................................................................	22	1	264.00	4.00	0.00	1.00	259.00
...................................................AATTGCACTGGAAGAATTCACGG.........................................................................	23	1	260.00	2.00	1.00	2.00	255.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	246.00	93.00	16.00	34.00	103.00
...................................................AATGGCACTGGAAGAATTCACTG.........................................................................	23	1	231.00	18.00	8.00	5.00	200.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	223.00	2.00	6.00	1.00	214.00
...................................................AATGGCACTTGAAGAATTCACGG.........................................................................	23	1	208.00	4.00	0.00	1.00	203.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	204.00	1.00	6.00	0.00	197.00
...................................................AATGGCACTGGAATAATTCACG..........................................................................	22	1	201.00	1.00	1.00	1.00	198.00
...................................................AATGGCACTGGAATAATTCAC...........................................................................	21	1	196.00	2.00	1.00	1.00	192.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	190.00	2.00	2.00	1.00	185.00
...................................................AATGGCACTGTAAGAATTCACG..........................................................................	22	1	189.00	2.00	2.00	2.00	183.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	186.00	4.00	0.00	2.00	180.00
...................................................AATGGCACTGTAAGAATTCAC...........................................................................	21	1	178.00	10.00	1.00	2.00	165.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	174.00	2.00	1.00	3.00	168.00
...................................................AATGGCACTGGAAGAATTAAC...........................................................................	21	1	166.00	0.00	4.00	0.00	162.00
...................................................ATTGGCACTGGGAGAATTCAC...........................................................................	21	2	81.00	0.00	0.50	0.00	80.50
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	162.00	38.00	19.00	38.00	67.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	158.00	51.00	16.00	34.00	57.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	157.00	43.00	16.00	27.00	71.00
...................................................AATGGCACTGGAAGAATTAACG..........................................................................	22	1	154.00	0.00	4.00	1.00	149.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	149.00	17.00	8.00	8.00	116.00
...................................................AATGGCACTGTAAGAATTCACGG.........................................................................	23	1	149.00	7.00	3.00	2.00	137.00
...................................................AATGTCACTGGAAGAATTCACG..........................................................................	22	1	144.00	3.00	1.00	1.00	139.00
...................................................AATGTCACTGGAAGAATTCAC...........................................................................	21	1	140.00	1.00	2.00	0.00	137.00
...................................................AATGGCACTGGAATAATTCACGG.........................................................................	23	1	138.00	1.00	1.00	2.00	134.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	136.00	51.00	18.00	39.00	28.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	136.00	10.00	5.00	4.00	117.00
...................................................AATGGAACTGGAAGAATTCAC...........................................................................	21	1	127.00	0.00	1.00	1.00	125.00
...................................................AATGGCAATGGAAGAATTCACGGG........................................................................	24	1	120.00	7.00	1.00	4.00	108.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	120.00	30.00	8.00	21.00	61.00
...................................................AATGGCACTGGAAGAATTAACGG.........................................................................	23	1	119.00	1.00	1.00	0.00	117.00
...................................................AATGTCACTGGAAGAATTCACGG.........................................................................	23	1	119.00	3.00	0.00	0.00	116.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	117.00	13.00	4.00	9.00	91.00
...................................................AATTGCACTGGAAGAATTCA............................................................................	20	1	117.00	2.00	0.00	0.00	115.00
...................................................AATGGCACTGGAAGAATTCACTGGT.......................................................................	25	1	113.00	1.00	0.00	1.00	111.00
...................................................AATGGCACTTGAAGAATTCA............................................................................	20	1	112.00	1.00	1.00	1.00	109.00
...................................................ATTGGCACTGGGAGAATTCA............................................................................	20	2	53.00	0.00	1.00	0.00	52.00
...................................................AATGGAACTGGAAGAATTCACG..........................................................................	22	1	101.00	2.00	5.00	0.00	94.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	98.00	2.00	9.00	0.00	87.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	94.00	3.00	2.00	6.00	83.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	93.00	11.00	5.00	8.00	69.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	92.00	3.00	34.00	4.00	51.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	91.00	16.00	4.00	10.00	61.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	88.00	27.00	9.00	18.00	34.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	87.00	20.00	2.00	6.00	59.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	85.00	0.00	5.00	0.00	80.00
...................................................AATGGCACTGGAAGACTTCACGGG........................................................................	24	1	85.00	13.00	2.00	6.00	64.00
...................................................AATGGCACTGGAATAATTCA............................................................................	20	1	84.00	0.00	2.00	0.00	82.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	84.00	28.00	6.00	10.00	40.00
...................................................AATGGCACTGGAAGAATTCAAG..........................................................................	22	1	81.00	2.00	5.00	0.00	74.00
...................................................AATGGAACTGGAAGAATTCACGG.........................................................................	23	1	81.00	0.00	2.00	0.00	79.00
...................................................AATGGCACTCGAAGAATTCACGGG........................................................................	24	1	77.00	25.00	1.00	13.00	38.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	75.00	6.00	2.00	4.00	63.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	75.00	15.00	16.00	17.00	27.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	73.00	15.00	2.00	10.00	46.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	71.00	27.00	4.00	15.00	25.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	69.00	7.00	1.00	6.00	55.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	65.00	16.00	1.00	7.00	41.00
...................................................AATGTCACTGGAAGAATTCA............................................................................	20	1	65.00	0.00	1.00	0.00	64.00
...................................................AATGGCAATGGAAGAATTCACG..........................................................................	22	1	64.00	2.00	4.00	1.00	57.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	63.00	15.00	4.00	6.00	38.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	62.00	16.00	1.00	13.00	32.00
...................................................AATGGCACTGGAAGAATTCACGTGT.......................................................................	25	1	61.00	1.00	2.00	1.00	57.00
...................................................AATGGCAATGGAAGAATTCAC...........................................................................	21	1	60.00	0.00	1.00	0.00	59.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	60.00	1.00	0.00	0.00	59.00
...................................................AATGGCACTGGAAGAATTAA............................................................................	20	1	60.00	0.00	1.00	0.00	59.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	58.00	8.00	5.00	9.00	36.00
...................................................AAAGGCACTGGAAGAATTCACGGG........................................................................	24	1	56.00	5.00	0.00	0.00	51.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	56.00	8.00	1.00	4.00	43.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	56.00	22.00	0.00	7.00	27.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	55.00	4.00	0.00	6.00	45.00
...................................................AACGGCACTGGAAGAATTCAC...........................................................................	21	1	53.00	2.00	2.00	1.00	48.00
...................................................AATGGCACTGGAAGAATTCACGTT........................................................................	24	1	53.00	6.00	2.00	3.00	42.00
...................................................AATGGCACTGGAAGAATTCACTGGA.......................................................................	25	1	53.00	1.00	1.00	2.00	49.00
...................................................AATGGCACTGGAGGAATTCAC...........................................................................	21	1	53.00	1.00	1.00	1.00	50.00

droAna3

-----------------G-----------T-TTCTCCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCTA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCAAAAAAGTGAA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	64606.00	15333.00	42484.00	5169.00	1620.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	57429.00	18154.00	30702.00	8349.00	224.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	54393.00	8891.00	40478.00	4812.00	212.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	43907.00	8534.00	31932.00	3031.00	410.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	25772.00	7357.00	15110.00	3243.00	62.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	7556.00	2371.00	4523.00	642.00	20.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	7510.00	1848.00	5206.00	403.00	53.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	2016.00	322.00	1574.00	115.00	5.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	1842.00	507.00	1188.00	132.00	15.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	1329.00	332.00	751.00	140.00	106.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	1194.00	333.00	733.00	124.00	4.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	643.00	171.00	394.00	69.00	9.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	516.00	58.00	327.00	58.00	73.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	497.00	1.00	440.00	53.00	3.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	440.00	84.00	354.00	1.00	1.00
...................................................AATGTCACTGGAAGAATTCAC...........................................................................	21	1	425.00	74.00	346.00	5.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	425.00	113.00	287.00	24.00	1.00
...................................................AAGGGCACTGGAAGAATTCAC...........................................................................	21	1	403.00	2.00	358.00	43.00	0.00
...................................................AATGTCACTGGAAGAATTCACG..........................................................................	22	1	368.00	115.00	240.00	13.00	0.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	359.00	34.00	252.00	33.00	40.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	331.00	107.00	222.00	2.00	0.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	330.00	65.00	238.00	22.00	5.00
...................................................AAGGGCACTGGAAGAATTCACG..........................................................................	22	1	329.00	2.00	265.00	62.00	0.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	314.00	21.00	222.00	69.00	2.00
...................................................AATGGCACTGGAAGAATTCAAG..........................................................................	22	1	313.00	113.00	180.00	20.00	0.00
...................................................AATGGCACTGGAAGAATTCAT...........................................................................	21	1	305.00	107.00	170.00	28.00	0.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	298.00	130.00	157.00	10.00	1.00
...................................................AATGGCACTGGAAGAATTCATG..........................................................................	22	1	292.00	158.00	107.00	27.00	0.00
...................................................AAGGGCACTGGAAGAATTCACGG.........................................................................	23	1	289.00	1.00	272.00	15.00	1.00
...................................................AATGTCACTGGAAGAATTCACGG.........................................................................	23	1	287.00	48.00	236.00	1.00	2.00
...................................................AATGGAACTGGAAGAATTCAC...........................................................................	21	1	286.00	26.00	243.00	17.00	0.00
...................................................AATGGAACTGGAAGAATTCACG..........................................................................	22	1	282.00	66.00	186.00	30.00	0.00
...................................................AATGGCACTGGAAGAATTT.............................................................................	19	1	268.00	98.00	152.00	18.00	0.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	261.00	33.00	219.00	9.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	261.00	61.00	143.00	47.00	10.00
...................................................AATGGAACTGGAAGAATTCACGG.........................................................................	23	1	237.00	29.00	198.00	10.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	235.00	84.00	139.00	12.00	0.00
...................................................AATGGCACTGGAAGAATTCAG...........................................................................	21	1	226.00	92.00	129.00	5.00	0.00
...................................................AATGGCACTGGAATAATTCACGGG........................................................................	24	1	224.00	29.00	187.00	2.00	6.00
...................................................AATGGCACTGGAATAATTCAC...........................................................................	21	1	215.00	26.00	185.00	2.00	2.00
...................................................AATGGCACTGGAAGAATTCAAGG.........................................................................	23	1	215.00	46.00	161.00	7.00	1.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	213.00	27.00	144.00	42.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	208.00	71.00	112.00	19.00	6.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	208.00	52.00	149.00	2.00	5.00
...................................................AATGGCACTGTAAGAATTCAC...........................................................................	21	1	207.00	31.00	167.00	6.00	3.00
...................................................AATGGCACTTGAAGAATTCAC...........................................................................	21	1	203.00	10.00	187.00	4.00	2.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	198.00	18.00	168.00	4.00	8.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	197.00	34.00	160.00	2.00	1.00
...................................................AATGTCACTGGAAGAATTCA............................................................................	20	1	195.00	50.00	142.00	3.00	0.00
...................................................AATTGCACTGGAAGAATTCACG..........................................................................	22	1	179.00	42.00	133.00	3.00	1.00
...................................................AATGGCACTGGAAGAATTCATGG.........................................................................	23	1	179.00	69.00	105.00	5.00	0.00
...................................................AATGGCACTGGAATAATTCACG..........................................................................	22	1	174.00	65.00	102.00	7.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	174.00	27.00	120.00	24.00	3.00
...................................................AATTGCACTGGAAGAATTCAC...........................................................................	21	1	171.00	28.00	142.00	0.00	1.00
...................................................AATGGCACTGGAAGAATTCACTG.........................................................................	23	1	156.00	14.00	120.00	13.00	9.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	154.00	10.00	48.00	57.00	39.00
...................................................AAGGGCACTGGAAGAATTCA............................................................................	20	1	153.00	1.00	129.00	23.00	0.00
...................................................AATGGCACTGGAAGAATTCT............................................................................	20	1	150.00	50.00	80.00	20.00	0.00
...................................................AATGGCACTGTAAGAATTCACG..........................................................................	22	1	148.00	47.00	94.00	7.00	0.00
...................................................AATGGCACTGTAAGAATTCACGG.........................................................................	23	1	144.00	21.00	121.00	0.00	2.00
...................................................AATTGCACTGGAAGAATTCACGG.........................................................................	23	1	143.00	15.00	123.00	2.00	3.00
...................................................AATGGCACTGGAATAATTCACGG.........................................................................	23	1	142.00	22.00	116.00	3.00	1.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	137.00	20.00	103.00	7.00	7.00
...................................................AATGGCACTGGAAGAATTCAGG..........................................................................	22	1	137.00	83.00	45.00	9.00	0.00
...................................................AATGGCACTGGAAGAATTAAC...........................................................................	21	1	137.00	8.00	117.00	12.00	0.00
...................................................AATGGCACTTGAAGAATTCACG..........................................................................	22	1	134.00	19.00	106.00	8.00	1.00
...................................................AATGGCACTGGAAGAATTCACGTT........................................................................	24	1	132.00	45.00	78.00	8.00	1.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	131.00	23.00	90.00	16.00	2.00
...................................................AATGGCACTGGAAGAATTCAGGGG........................................................................	24	1	130.00	70.00	59.00	1.00	0.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	130.00	22.00	100.00	8.00	0.00
...................................................AATGGCACTGGAAGAATTAACG..........................................................................	22	1	129.00	20.00	88.00	21.00	0.00
...................................................AATGGCACTTGAAGAATTCACGG.........................................................................	23	1	127.00	10.00	111.00	1.00	5.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	124.00	12.00	19.00	43.00	50.00
...................................................AATGGCACTGGGAGAATTCACG..........................................................................	22	1	122.00	58.00	39.00	24.00	1.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	120.00	35.00	76.00	6.00	3.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	119.00	46.00	21.00	41.00	11.00
...................................................GATGGCACTGGAAGAATTCACG..........................................................................	22	1	118.00	39.00	63.00	15.00	1.00
...................................................ATTGGCACTGGGAGAATTCAC...........................................................................	21	2	59.00	0.00	54.50	4.50	0.00
...................................................AATGGCACTGGCAGAATTCACG..........................................................................	22	1	117.00	72.00	10.00	29.00	6.00
...................................................AATGGAACTGGAAGAATTCA............................................................................	20	1	114.00	25.00	81.00	8.00	0.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	111.00	31.00	72.00	7.00	1.00
...................................................AATGGCACTGGAAGAATTAACGG.........................................................................	23	1	110.00	19.00	87.00	4.00	0.00
...................................................AATGGCACTGGAGGAATTCACG..........................................................................	22	1	108.00	43.00	49.00	15.00	1.00
...................................................AATGGCACTGGAGGAATTCAC...........................................................................	21	1	108.00	22.00	77.00	9.00	0.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	107.00	24.00	60.00	14.00	9.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	106.00	34.00	70.00	2.00	0.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	97.00	25.00	46.00	6.00	20.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	95.00	42.00	40.00	10.00	3.00
...................................................GATGGCACTGGAAGAATTCAC...........................................................................	21	1	94.00	11.00	77.00	5.00	1.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	94.00	24.00	57.00	10.00	3.00
...................................................AATGGCACTGTAAGAATTCA............................................................................	20	1	92.00	22.00	67.00	2.00	1.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	92.00	16.00	23.00	49.00	4.00
...................................................AATGGCACTGGGAGAATTCAC...........................................................................	21	2	45.00	12.00	18.00	14.50	0.50
...................................................AATGGCACTGGAAGACTTCACG..........................................................................	22	1	89.00	52.00	14.00	22.00	1.00
...................................................AATGGCACTGAAAGAATTCACG..........................................................................	22	1	89.00	56.00	27.00	6.00	0.00
...................................................AATGGCACTGGAAGAGTTCACG..........................................................................	22	1	88.00	40.00	31.00	17.00	0.00
...................................................AATGGCACTTGAAGAATTCA............................................................................	20	1	88.00	16.00	69.00	3.00	0.00
...................................................AATGGCACTGGAATAATTCA............................................................................	20	1	88.00	15.00	69.00	4.00	0.00
...................................................AATTGCACTGGAAGAATTCA............................................................................	20	1	86.00	17.00	66.00	3.00	0.00
...................................................GATGGCACTGGAAGAATTCACGG.........................................................................	23	1	86.00	16.00	66.00	3.00	1.00
...................................................AGTGGCACTGGAAGAATTCACG..........................................................................	22	1	86.00	41.00	28.00	17.00	0.00

dp4

ACTCAT---A----AGTG-----------T-ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTT-TCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAA	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	52962.00	31805.00	14926.00	3248.00	2983.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	20887.00	15723.00	1463.00	3596.00	105.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	19788.00	15541.00	1578.00	1423.00	1246.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	18114.00	12772.00	1322.00	3824.00	196.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	9969.00	7251.00	218.00	2480.00	20.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	6626.00	5932.00	380.00	249.00	65.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	1782.00	1202.00	13.00	452.00	115.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	929.00	814.00	39.00	75.00	1.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	776.00	521.00	72.00	55.00	128.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	637.00	541.00	9.00	83.00	4.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	490.00	462.00	9.00	10.00	9.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	306.00	20.00	266.00	14.00	6.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	254.00	246.00	0.00	8.00	0.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	236.00	159.00	4.00	73.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	210.00	204.00	0.00	1.00	5.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	164.00	14.00	135.00	15.00	0.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	146.00	122.00	4.00	19.00	1.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	131.00	10.00	109.00	10.00	2.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	131.00	17.00	85.00	29.00	0.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	131.00	83.00	22.00	12.00	14.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	106.00	23.00	76.00	6.00	1.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	105.00	32.00	64.00	9.00	0.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	102.00	55.00	39.00	7.00	1.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	91.00	22.00	58.00	6.00	5.00
...................................................AATGGCACTGGAAGTATTCACGGG........................................................................	24	1	84.00	1.00	80.00	3.00	0.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	82.00	42.00	11.00	29.00	0.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	81.00	14.00	59.00	7.00	1.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	78.00	2.00	62.00	14.00	0.00
...................................................AATGGCACTGGAAGAATTT.............................................................................	19	1	77.00	67.00	0.00	9.00	1.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	75.00	21.00	45.00	7.00	2.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	74.00	18.00	45.00	11.00	0.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	67.00	25.00	30.00	10.00	2.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	67.00	13.00	46.00	5.00	3.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	66.00	31.00	21.00	12.00	2.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	63.00	51.00	4.00	6.00	2.00
..................................................CAATGGCACTGGAAGAATTCACGGG........................................................................	25	1	62.00	47.00	10.00	4.00	1.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	59.00	29.00	26.00	3.00	1.00
....................................................ATGGCACTGGAAGAATTCACGG.........................................................................	22	1	59.00	47.00	1.00	4.00	7.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	58.00	29.00	21.00	4.00	4.00
...................................................AATGGCACTGGAAGAATTCACGTT........................................................................	24	1	57.00	52.00	0.00	5.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	54.00	30.00	14.00	5.00	5.00
...................................................AATGGCAATGGAAGAATTCACGGG........................................................................	24	1	53.00	5.00	42.00	5.00	1.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	51.00	16.00	33.00	2.00	0.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	50.00	37.00	1.00	2.00	10.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	48.00	28.00	17.00	2.00	1.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	48.00	16.00	25.00	6.00	1.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	46.00	32.00	11.00	2.00	1.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	46.00	22.00	20.00	3.00	1.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	46.00	23.00	2.00	19.00	2.00
...................................................AATGGCACTGGAAGAACTCACGGG........................................................................	24	1	45.00	17.00	24.00	3.00	1.00
...................................................AATGGTACTGGAAGAATTCACGGG........................................................................	24	1	44.00	18.00	20.00	4.00	2.00
...................................................AATGGCACTGGTAGAATTCACGGG........................................................................	24	1	44.00	3.00	37.00	4.00	0.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	43.00	21.00	17.00	1.00	4.00
...................................................AATGGCACTGGAAGCATTCAC...........................................................................	21	1	43.00	7.00	9.00	26.00	1.00
...................................................AATGGCACTGGACGAATTCACGGG........................................................................	24	1	42.00	8.00	30.00	4.00	0.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	42.00	18.00	20.00	4.00	0.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	42.00	12.00	27.00	2.00	1.00
...................................................AATGGCACTGGAAGACTTCACGGG........................................................................	24	1	42.00	12.00	27.00	3.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGTTT......................................................................	26	1	41.00	39.00	0.00	1.00	1.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	41.00	21.00	15.00	4.00	1.00
...................................................AAAGGCACTGGAAGAATTCACGGG........................................................................	24	1	40.00	3.00	22.00	15.00	0.00
....................................................ATGGCACTGGAAGAATTCACG..........................................................................	21	1	40.00	30.00	0.00	10.00	0.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	40.00	13.00	22.00	3.00	2.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	39.00	8.00	28.00	3.00	0.00
...................................................AATGGCACTCGAAGAATTCACGGG........................................................................	24	1	38.00	17.00	21.00	0.00	0.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	38.00	24.00	13.00	1.00	0.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	38.00	29.00	0.00	0.00	9.00
...................................................AATGGCACTGGAAGAATTTACGGG........................................................................	24	1	38.00	20.00	16.00	2.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGTTTT....................................................................	28	1	37.00	37.00	0.00	0.00	0.00
...................................................AATGGCACTGGCAGAATTCAC...........................................................................	21	1	37.00	5.00	10.00	22.00	0.00
...................................................AATGGCACTGGAAGAATTCCCGG.........................................................................	23	1	37.00	23.00	7.00	6.00	1.00
...................................................AATGGCACTGGATGAATTCACGGG........................................................................	24	1	36.00	4.00	27.00	2.00	3.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	35.00	23.00	4.00	8.00	0.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	34.00	28.00	2.00	2.00	2.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	33.00	10.00	18.00	5.00	0.00
...................................................AATGGCACTGGAAGGATTCAC...........................................................................	21	1	33.00	12.00	15.00	6.00	0.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	33.00	26.00	4.00	1.00	2.00
...................................................AATGGCACTGGAAGAATTCCC...........................................................................	21	1	33.00	17.00	7.00	9.00	0.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	32.00	19.00	9.00	4.00	0.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	30.00	21.00	2.00	7.00	0.00
...................................................AATGGCACTGGAAGAAGTCACGGG........................................................................	24	1	30.00	0.00	25.00	5.00	0.00
...................................................AATGACACTGGAAGAATTCACGGG........................................................................	24	1	29.00	16.00	9.00	3.00	1.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	29.00	19.00	3.00	7.00	0.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	29.00	13.00	11.00	2.00	3.00
...................................................AATGGCACTGGAAGCATTCA............................................................................	20	1	28.00	5.00	3.00	20.00	0.00
...................................................AATGGCACTGGAAGAATTCT............................................................................	20	1	28.00	19.00	0.00	9.00	0.00
...................................................AATGGCATTGGAAGAATTCACGGG........................................................................	24	1	28.00	13.00	12.00	2.00	1.00
...................................................AACGGCACTGGAAGAATTCAC...........................................................................	21	1	27.00	14.00	3.00	10.00	0.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	27.00	15.00	2.00	0.00	10.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	27.00	20.00	1.00	5.00	1.00
....................................................ATGGCACTGGAAGAATTCAC...........................................................................	20	1	26.00	21.00	1.00	4.00	0.00
...................................................AATGGCACTGGAGGAATTCACG..........................................................................	22	1	25.00	15.00	3.00	7.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................	25	1	25.00	12.00	8.00	2.00	3.00
...................................................AATGGCACTGGAAGAACTCAC...........................................................................	21	1	25.00	15.00	2.00	8.00	0.00
...................................................AATGGCACCGGAAGAATTCACGG.........................................................................	23	1	25.00	22.00	1.00	1.00	1.00
...................................................AATGGCACTGGAAGAATGCACGGG........................................................................	24	1	25.00	0.00	21.00	4.00	0.00
...................................................AAAGGCACTGGAAGAATTCAC...........................................................................	21	1	24.00	1.00	2.00	21.00	0.00
...................................................AATGGCACTGGAAGAATTCAT...........................................................................	21	1	24.00	15.00	5.00	4.00	0.00
...................................................AAGGGCACTGGAAGAATTCAC...........................................................................	21	1	24.00	3.00	7.00	14.00	0.00
....................................................ATGGCACTGGAAGAATTCACGGGT.......................................................................	24	1	24.00	21.00	0.00	2.00	1.00
...................................................AAGGGCACTGGAAGAATTCACG..........................................................................	22	1	23.00	4.00	6.00	12.00	1.00

droPer1

ACTCAT---A----AGTG-----------T-ATCCACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTT-TCAA--TACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACT----CATCTCAA---TCAA	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	56930.00	10722.00	2285.00	1883.00	6915.00	35125.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	22612.00	3062.00	162.00	4308.00	14760.00	320.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	16590.00	5739.00	304.00	864.00	3870.00	5813.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	15479.00	2654.00	349.00	2938.00	8932.00	606.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	11985.00	1479.00	73.00	2476.00	7933.00	24.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	2755.00	1714.00	61.00	112.00	710.00	158.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	2500.00	415.00	8.00	403.00	1647.00	27.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	1414.00	213.00	33.00	43.00	173.00	952.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	514.00	247.00	5.00	53.00	202.00	7.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	481.00	11.00	46.00	10.00	50.00	364.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	395.00	110.00	1.00	62.00	219.00	3.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	327.00	22.00	3.00	63.00	238.00	1.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	243.00	11.00	0.00	0.00	1.00	231.00
...................................................AAGGGCACTGGAAGAATTCAC...........................................................................	21	1	235.00	0.00	1.00	8.00	226.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	188.00	151.00	0.00	1.00	33.00	3.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	164.00	11.00	0.00	0.00	0.00	153.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	137.00	15.00	2.00	20.00	98.00	2.00
...................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................	25	1	135.00	6.00	0.00	0.00	5.00	124.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	131.00	25.00	1.00	9.00	24.00	72.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	128.00	9.00	0.00	0.00	2.00	117.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	127.00	1.00	2.00	27.00	97.00	0.00
...................................................AATGGCACTGGAAGCATTCAC...........................................................................	21	1	117.00	0.00	3.00	18.00	96.00	0.00
...................................................AATGGCACTGGCAGAATTCAC...........................................................................	21	1	117.00	2.00	2.00	18.00	95.00	0.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	117.00	5.00	1.00	18.00	91.00	2.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	117.00	6.00	2.00	1.00	16.00	92.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	114.00	24.00	1.00	8.00	49.00	32.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	113.00	13.00	4.00	10.00	84.00	2.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	111.00	5.00	4.00	18.00	79.00	5.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	109.00	15.00	0.00	0.00	4.00	90.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	107.00	3.00	6.00	2.00	18.00	78.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	101.00	11.00	0.00	0.00	12.00	78.00
...................................................AAGGGCACTGGAAGAATTCACG..........................................................................	22	1	92.00	0.00	1.00	5.00	86.00	0.00
...................................................AATGGCACTGGGAGAATTCAC...........................................................................	21	2	43.50	1.00	0.00	6.00	36.50	0.00
...................................................AATGGCACTGGCAGAATTCA............................................................................	20	1	86.00	0.00	4.00	11.00	71.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	82.00	67.00	0.00	0.00	13.00	2.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	82.00	2.00	3.00	3.00	71.00	3.00
...................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................	26	1	81.00	1.00	0.00	0.00	4.00	76.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	77.00	24.00	1.00	9.00	14.00	29.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	75.00	5.00	1.00	1.00	10.00	58.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	74.00	17.00	2.00	6.00	29.00	20.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	72.00	5.00	6.00	9.00	49.00	3.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	70.00	2.00	1.00	14.00	53.00	0.00
...................................................AATGGCACTGGAAGCATTCA............................................................................	20	1	70.00	1.00	1.00	10.00	58.00	0.00
...................................................AATGGCACTGGAAGGATTCAC...........................................................................	21	1	70.00	0.00	2.00	7.00	61.00	0.00
...................................................AAGGGCACTGGAAGAATTCA............................................................................	20	1	69.00	0.00	0.00	0.00	69.00	0.00
...................................................AATGGCAATGGAAGAATTCAC...........................................................................	21	1	68.00	3.00	1.00	4.00	60.00	0.00
...................................................AAAGGCACTGGAAGAATTCAC...........................................................................	21	1	68.00	0.00	0.00	5.00	63.00	0.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	68.00	2.00	16.00	7.00	40.00	3.00
...................................................AATGGCACTGGGAGAATTCA............................................................................	20	2	33.00	0.50	0.50	2.00	30.00	0.00
...................................................AATGGCACTGGAAGAATTCAT...........................................................................	21	1	66.00	2.00	2.00	5.00	57.00	0.00
...................................................AATGGCACTGGAAGACTTCAC...........................................................................	21	1	60.00	0.00	1.00	5.00	54.00	0.00
.......................................................GCACTGGAAGAATTCACGGG........................................................................	20	1	60.00	5.00	0.00	2.00	0.00	53.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	59.00	8.00	1.00	1.00	5.00	44.00
...................................................AATGGCACTGGTAGAATTCAC...........................................................................	21	1	58.00	0.00	1.00	0.00	56.00	1.00
...................................................AATGGCACTGGAAGCATTCACG..........................................................................	22	1	57.00	0.00	4.00	10.00	43.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	56.00	36.00	0.00	2.00	18.00	0.00
...................................................AATGGCACTGGAAGAATTCCC...........................................................................	21	1	56.00	1.00	1.00	15.00	39.00	0.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	56.00	5.00	9.00	5.00	29.00	8.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	56.00	21.00	4.00	3.00	16.00	12.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	55.00	4.00	1.00	0.00	12.00	38.00
...................................................AATGGCAATGGAAGAATTCACG..........................................................................	22	1	55.00	0.00	0.00	1.00	54.00	0.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	54.00	8.00	1.00	2.00	8.00	35.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	53.00	10.00	7.00	8.00	14.00	14.00
...................................................AATGGCACTGGAAGAATTCTC...........................................................................	21	1	52.00	0.00	1.00	1.00	50.00	0.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	51.00	9.00	1.00	2.00	21.00	18.00
...................................................ATTGGCACTGGGAGAATTCA............................................................................	20	2	25.00	0.50	0.00	1.50	23.00	0.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	50.00	19.00	1.00	0.00	9.00	21.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	49.00	1.00	18.00	2.00	26.00	2.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	48.00	8.00	4.00	2.00	21.00	13.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	47.00	1.00	3.00	0.00	15.00	28.00
...................................................AATGGCACTGGAAGAACTCAC...........................................................................	21	1	47.00	0.00	0.00	7.00	40.00	0.00
...................................................AATGGAACTGGAAGAATTCAC...........................................................................	21	1	46.00	2.00	0.00	16.00	28.00	0.00
...................................................AATGGCACTGGACGAATTCACGGG........................................................................	24	1	46.00	0.00	4.00	0.00	14.00	28.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	45.00	1.00	6.00	4.00	9.00	25.00
...................................................AATGGCACTGGAAGAATGCAC...........................................................................	21	1	45.00	0.00	0.00	3.00	42.00	0.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	45.00	1.00	0.00	3.00	36.00	5.00
...................................................AATGGCACTGGAAGAATTCTCG..........................................................................	22	1	44.00	0.00	1.00	4.00	39.00	0.00
...................................................AATGGCACTGGAAGAATGCACG..........................................................................	22	1	44.00	0.00	0.00	4.00	40.00	0.00
...................................................AATGGCACTGGAAGAATTCT............................................................................	20	1	42.00	2.00	0.00	4.00	36.00	0.00
....................................................ATGGCACTGGAAGAATTCACGG.........................................................................	22	1	41.00	14.00	0.00	3.00	15.00	9.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	40.00	7.00	4.00	0.00	11.00	18.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	40.00	3.00	8.00	3.00	17.00	9.00
...................................................ATTGGCACTGGGAGAATTCAC...........................................................................	21	2	20.00	1.00	0.00	1.50	17.50	0.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	40.00	0.00	2.00	8.00	29.00	1.00
...................................................AATGGCACTGGATGAATTCA............................................................................	20	1	39.00	0.00	0.00	2.00	37.00	0.00
...................................................AATGACACTGGAAGAATTCAC...........................................................................	21	1	39.00	2.00	0.00	3.00	34.00	0.00
....................................................ATGGCACTGGAAGAATTCACG..........................................................................	21	1	39.00	4.00	1.00	10.00	24.00	0.00
...................................................AATGGCACTGGAAGAATTT.............................................................................	19	1	39.00	13.00	0.00	1.00	25.00	0.00
...................................................AATGGCACCGGAAGAATTCAC...........................................................................	21	1	38.00	1.00	0.00	4.00	33.00	0.00
...................................................AATGGCACGGGAAGAATTCAC...........................................................................	21	1	38.00	1.00	0.00	1.00	36.00	0.00
...................................................AATTGCACTGGAAGAATTCACGG.........................................................................	23	1	37.00	9.00	0.00	0.00	2.00	26.00
...................................................AATGGCACTGGAAGAATCCAC...........................................................................	21	1	37.00	5.00	0.00	2.00	29.00	1.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	37.00	5.00	0.00	9.00	22.00	1.00
...................................................AATGGCACTGGAAGAAGTCAC...........................................................................	21	1	37.00	0.00	1.00	2.00	34.00	0.00
...................................................AATCGCACTGGAAGAATTCACG..........................................................................	22	1	37.00	0.00	1.00	2.00	29.00	5.00
...................................................AATGGCACTGGAGGAATTCA............................................................................	20	1	37.00	1.00	0.00	8.00	28.00	0.00
...................................................AATGTCACTGGAAGAATTCAC...........................................................................	21	1	37.00	8.00	1.00	3.00	8.00	17.00
...................................................AATGGCACTGCAAGAATTCAC...........................................................................	21	1	37.00	1.00	0.00	3.00	33.00	0.00
...................................................AATGGCGCTGGAAGAATTCAC...........................................................................	21	1	36.00	0.00	0.00	5.00	30.00	1.00
...................................................AATAGCACTGGAAGAATTCAC...........................................................................	21	1	36.00	5.00	0.00	11.00	20.00	0.00
...................................................AATGGCACTGGAAGAATTAAC...........................................................................	21	1	36.00	0.00	2.00	6.00	28.00	0.00

droWil1

GCTTTC---G----ATTG-----------G-TTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCATACAGA---ACAT	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	376078.00	32869.00	217800.00	52999.00	72410.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	150318.00	15433.00	13244.00	116246.00	5395.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	102393.00	24527.00	17768.00	33197.00	26901.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	62511.00	20012.00	6651.00	30515.00	5333.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	37725.00	6635.00	1270.00	29197.00	623.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	23358.00	1456.00	95.00	18484.00	3323.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	14179.00	5636.00	2495.00	5427.00	621.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	8147.00	936.00	1831.00	1018.00	4362.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	1720.00	269.00	29.00	1378.00	44.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	1692.00	574.00	479.00	592.00	47.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	1627.00	33.00	1099.00	69.00	426.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	1418.00	236.00	91.00	1032.00	59.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	1093.00	335.00	53.00	663.00	42.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	1072.00	30.00	544.00	90.00	408.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	852.00	17.00	743.00	73.00	19.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	670.00	33.00	395.00	66.00	176.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	608.00	11.00	360.00	35.00	202.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	604.00	104.00	282.00	110.00	108.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	602.00	38.00	283.00	69.00	212.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	584.00	19.00	12.00	535.00	18.00
...................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................	25	1	573.00	24.00	22.00	35.00	492.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	571.00	5.00	372.00	177.00	17.00
...................................................AATGGCACTGGAAGAATTAAC...........................................................................	21	1	567.00	5.00	12.00	546.00	4.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	561.00	31.00	249.00	79.00	202.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	555.00	15.00	455.00	38.00	47.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	544.00	3.00	289.00	240.00	12.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	530.00	330.00	38.00	130.00	32.00
...................................................CATGGCACTGGAAGAATTCAC...........................................................................	21	2	264.50	3.50	1.50	259.50	0.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	508.00	22.00	256.00	203.00	27.00
...................................................AATGGCAATGGAAGAATTCAC...........................................................................	21	1	508.00	5.00	5.00	498.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	479.00	75.00	151.00	187.00	66.00
...................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................	26	1	476.00	12.00	20.00	9.00	435.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	471.00	37.00	357.00	68.00	9.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	462.00	48.00	11.00	389.00	14.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	458.00	45.00	308.00	75.00	30.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	449.00	29.00	206.00	71.00	143.00
...................................................AATGGAACTGGAAGAATTCAC...........................................................................	21	1	430.00	4.00	36.00	386.00	4.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	428.00	10.00	142.00	253.00	23.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	388.00	28.00	11.00	328.00	21.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	385.00	33.00	220.00	67.00	65.00
...................................................AATGTCACTGGAAGAATTCAC...........................................................................	21	1	382.00	9.00	22.00	136.00	215.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	382.00	32.00	201.00	116.00	33.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	381.00	36.00	234.00	67.00	44.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	365.00	70.00	225.00	63.00	7.00
...................................................AATTGCACTGGAAGAATTCAC...........................................................................	21	1	363.00	22.00	27.00	195.00	119.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	326.00	24.00	185.00	61.00	56.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	322.00	30.00	165.00	89.00	38.00
...................................................AATGGCACTGGAATAATTCACGGG........................................................................	24	1	322.00	4.00	275.00	25.00	18.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	321.00	22.00	198.00	45.00	56.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	313.00	30.00	189.00	59.00	35.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	310.00	24.00	130.00	146.00	10.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	309.00	28.00	195.00	46.00	40.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	305.00	26.00	194.00	77.00	8.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	305.00	20.00	166.00	83.00	36.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	303.00	253.00	8.00	12.00	30.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	300.00	44.00	100.00	93.00	63.00
...................................................AATGGCACTGGAAGAATTT.............................................................................	19	1	295.00	24.00	1.00	265.00	5.00
...................................................TATGGCACTGGAAGAATTCAC...........................................................................	21	1	294.00	1.00	1.00	292.00	0.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	287.00	10.00	152.00	52.00	73.00
...................................................AATGGCAATGGAAGAATTCACGGG........................................................................	24	1	282.00	5.00	68.00	206.00	3.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	272.00	43.00	178.00	41.00	10.00
...................................................AATGGCACTCGAAGAATTCACGGG........................................................................	24	1	268.00	22.00	175.00	51.00	20.00
...................................................AATGGCACTGGAAGACTTCACGGG........................................................................	24	1	268.00	18.00	190.00	59.00	1.00
...................................................CATGGCACTGGAAGAATTCACGGG........................................................................	24	1	267.00	9.00	44.00	208.00	6.00
...................................................AATGGCACTxGAAGAATTCACGGG........................................................................	23	1	266.00	16.00	166.00	50.00	34.00
...................................................AATGACACTGGAAGAATTCACGGG........................................................................	24	1	266.00	25.00	127.00	76.00	38.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	263.00	18.00	131.00	90.00	24.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	262.00	31.00	162.00	55.00	14.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	256.00	17.00	135.00	98.00	6.00
...................................................AATGGTACTGGAAGAATTCACGGG........................................................................	24	1	256.00	15.00	131.00	69.00	41.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	250.00	30.00	146.00	56.00	18.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	250.00	25.00	157.00	46.00	22.00
...................................................AATGGCACTGAAAGAATTCACGGG........................................................................	24	1	246.00	11.00	106.00	84.00	45.00
....................................................AATGCACTGGAAGAATTCAC...........................................................................	20	1	243.00	19.00	16.00	141.00	67.00
...................................................ACTGGCACTGGAAGAATTCACGGG........................................................................	24	1	241.00	14.00	181.00	43.00	3.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	240.00	11.00	109.00	39.00	81.00
...................................................AATTGCACTGGAAGAATTCACGG.........................................................................	23	1	236.00	22.00	43.00	51.00	120.00
...................................................AATAGCACTGGAAGAATTCAC...........................................................................	21	1	235.00	9.00	13.00	208.00	5.00
...................................................AATGGCACTGGAAGAACTCACGGG........................................................................	24	1	232.00	15.00	159.00	50.00	8.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	229.00	7.00	153.00	17.00	52.00
...................................................AATGGCACTGGAAAAATTCAC...........................................................................	21	1	228.00	8.00	7.00	211.00	2.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	223.00	154.00	7.00	54.00	8.00
...................................................AATGGCATTGGAAGAATTCACGGG........................................................................	24	1	223.00	18.00	99.00	84.00	22.00
...................................................AATGGCACTGGAGGAATTCAC...........................................................................	21	1	215.00	18.00	17.00	169.00	11.00
...................................................AATGCCACTGGAAGAATTCAC...........................................................................	21	1	213.00	15.00	14.00	125.00	59.00
...................................................AATGGCACTGGAAGAATTCAAG..........................................................................	22	1	210.00	6.00	11.00	192.00	1.00
...................................................AATTGCACTGGAAGAATTCACG..........................................................................	22	1	210.00	24.00	24.00	46.00	116.00
...................................................AATGGCACTGGAAGAATTCAAGG.........................................................................	23	1	206.00	3.00	23.00	172.00	8.00
...................................................AATGGCACTGGAAGAATTCCC...........................................................................	21	1	206.00	17.00	15.00	167.00	7.00
...................................................AATGACACTGGAAGAATTCAC...........................................................................	21	1	205.00	8.00	7.00	178.00	12.00
...................................................AATGGCACTGGAxxAATTCACGGG........................................................................	22	1	198.00	14.00	104.00	39.00	41.00
...................................................AATGGCACTGGAAAAATTCACGGG........................................................................	24	1	194.00	16.00	61.00	83.00	34.00
...................................................AATGGCACTAGAAGAATTCAC...........................................................................	21	1	191.00	4.00	8.00	178.00	1.00
...................................................AATGGCACTGGAAGAATTCCCGG.........................................................................	23	1	190.00	48.00	30.00	98.00	14.00
...................................................GATGGCACTGGAAGAATTCAC...........................................................................	21	1	187.00	8.00	9.00	168.00	2.00
..................................................CAATGGCACTGGAAGAATTCACGGG........................................................................	25	1	186.00	23.00	110.00	42.00	11.00
...................................................AACGGCACTGGAAGAATTCAC...........................................................................	21	1	185.00	15.00	18.00	150.00	2.00
...................................................AATCGCACTGGAAGAATTCAC...........................................................................	21	1	183.00	17.00	21.00	113.00	32.00
...................................................AATGGCACCGGAAGAATTCAC...........................................................................	21	1	181.00	19.00	7.00	150.00	5.00
...................................................AATGGCACTGGAAGAATCCAC...........................................................................	21	1	180.00	19.00	12.00	147.00	2.00
...................................................AATGGCACTGGAAGAATTCC............................................................................	20	1	180.00	6.00	3.00	169.00	2.00

droVir3

CA-TCT---GCTTAATGT-------TGCTTGCTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTACAAC-------	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	282694.00	80142.00	8137.00	5664.00	135078.00	53673.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	117006.00	42020.00	4231.00	576.00	49102.00	21077.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	58131.00	43943.00	6844.00	243.00	4702.00	2399.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	20893.00	15753.00	3078.00	138.00	1130.00	794.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	14676.00	2794.00	375.00	70.00	6865.00	4572.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	12451.00	9515.00	2528.00	30.00	209.00	169.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	10054.00	7653.00	619.00	108.00	1249.00	425.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	5858.00	2513.00	697.00	4.00	1358.00	1286.00
...................................................AATGGCACTGGAAGAATTCACGGGG.......................................................................	25	1	1833.00	81.00	6.00	4.00	1114.00	628.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	1647.00	1253.00	169.00	63.00	103.00	59.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	1521.00	45.00	13.00	38.00	1147.00	278.00
...................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................	26	1	1184.00	45.00	9.00	0.00	626.00	504.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	1096.00	874.00	125.00	6.00	50.00	41.00
...................................................AATGGCACTGGAAGAATTCCCGG.........................................................................	23	1	757.00	51.00	21.00	4.00	507.00	174.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	752.00	515.00	30.00	3.00	140.00	64.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	724.00	70.00	1.00	10.00	521.00	122.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	686.00	308.00	37.00	8.00	256.00	77.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	674.00	575.00	65.00	1.00	26.00	7.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	664.00	27.00	32.00	39.00	366.00	200.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	636.00	496.00	29.00	61.00	46.00	4.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	621.00	186.00	22.00	21.00	292.00	100.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	595.00	90.00	1.00	0.00	391.00	113.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	487.00	380.00	62.00	3.00	34.00	8.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	479.00	25.00	3.00	18.00	334.00	99.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	411.00	329.00	67.00	1.00	6.00	8.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	346.00	117.00	11.00	6.00	151.00	61.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	339.00	46.00	0.00	10.00	225.00	58.00
...................................................AATGGCACTGGAAGAATTCACGGGAT......................................................................	26	1	332.00	74.00	5.00	1.00	155.00	97.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	325.00	236.00	6.00	0.00	60.00	23.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	312.00	63.00	4.00	6.00	189.00	50.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	311.00	101.00	47.00	144.00	14.00	5.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	302.00	52.00	9.00	2.00	186.00	53.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	281.00	94.00	14.00	6.00	109.00	58.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	281.00	60.00	70.00	129.00	18.00	4.00
.......................................................GCACTGGAAGAATTCACGGG........................................................................	20	1	277.00	3.00	1.00	0.00	222.00	51.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	276.00	46.00	2.00	7.00	159.00	62.00
...................................................AATGGCACTGGAAGAATTCACTG.........................................................................	23	1	272.00	249.00	12.00	5.00	4.00	2.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	264.00	87.00	86.00	73.00	11.00	7.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	260.00	219.00	21.00	0.00	13.00	7.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	246.00	86.00	15.00	10.00	93.00	42.00
...................................................AATTGCACTGGAAGAATTCACGG.........................................................................	23	1	237.00	40.00	3.00	2.00	151.00	41.00
...................................................AATGGCACTGGCAGAATTCACGG.........................................................................	23	1	236.00	9.00	7.00	4.00	145.00	71.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	223.00	80.00	5.00	7.00	94.00	37.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	219.00	105.00	15.00	27.00	55.00	17.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	214.00	107.00	19.00	24.00	41.00	23.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	213.00	54.00	21.00	34.00	57.00	47.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	207.00	51.00	7.00	8.00	102.00	39.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	196.00	82.00	24.00	1.00	69.00	20.00
....................................................AATGCACTGGAAGAATTCACGG.........................................................................	22	1	192.00	55.00	0.00	0.00	102.00	35.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	191.00	49.00	3.00	4.00	97.00	38.00
...................................................AATGGCACTGGAAGAATACACGGG........................................................................	24	1	191.00	170.00	5.00	4.00	10.00	2.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	188.00	49.00	15.00	6.00	94.00	24.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	177.00	78.00	17.00	10.00	54.00	18.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	176.00	49.00	10.00	13.00	79.00	25.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	175.00	61.00	5.00	9.00	72.00	28.00
...................................................AATGGCACTGGAAAAATTCACGGG........................................................................	24	1	174.00	87.00	4.00	4.00	63.00	16.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	173.00	104.00	13.00	0.00	30.00	26.00
...................................................AATGGCACTGGAAGAATTAACGG.........................................................................	23	1	173.00	41.00	8.00	0.00	108.00	16.00
...................................................AATGGCACTGGAAGAAATCACGGG........................................................................	24	1	172.00	151.00	4.00	4.00	9.00	4.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	171.00	73.00	14.00	15.00	44.00	25.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	170.00	129.00	8.00	4.00	21.00	8.00
....................................................ATGGCACTGGAAGAATTCACGG.........................................................................	22	1	164.00	67.00	6.00	0.00	65.00	26.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	162.00	75.00	46.00	34.00	3.00	4.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	153.00	41.00	2.00	4.00	79.00	27.00
...................................................AATGTCACTGGAAGAATTCACG..........................................................................	22	1	153.00	34.00	1.00	1.00	91.00	26.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	153.00	61.00	19.00	18.00	35.00	20.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	152.00	26.00	5.00	7.00	89.00	25.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	150.00	26.00	6.00	24.00	78.00	16.00
...................................................AATGGCACTGAAAGAATTCACGGG........................................................................	24	1	147.00	44.00	3.00	9.00	67.00	24.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	144.00	53.00	13.00	6.00	51.00	21.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	138.00	64.00	20.00	9.00	29.00	16.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	134.00	39.00	4.00	17.00	54.00	20.00
...................................................AATGGCACTxGAAGAATTCACGGG........................................................................	23	1	133.00	53.00	2.00	0.00	66.00	12.00
...................................................AATGGCACTGGAAGAACTCACGGG........................................................................	24	1	131.00	75.00	14.00	8.00	31.00	3.00
...................................................AATTGCACTGGAAGAATTCACG..........................................................................	22	1	131.00	38.00	3.00	1.00	68.00	21.00
...................................................AATGGCACTGGAAGAATTTACGGG........................................................................	24	1	124.00	44.00	3.00	4.00	54.00	19.00
...................................................AATGTCACTGGAAGAATTCACGG.........................................................................	23	1	122.00	29.00	1.00	0.00	67.00	25.00
....................................................AATGCACTGGAAGAATTCACG..........................................................................	21	1	121.00	48.00	0.00	0.00	56.00	17.00
...................................................AATGGTACTGGAAGAATTCACGGG........................................................................	24	1	121.00	29.00	8.00	2.00	54.00	28.00
...................................................AATGGCACTGGAAGAATTT.............................................................................	19	1	120.00	89.00	22.00	0.00	5.00	4.00
...................................................AATTGCACTGGAAGAATTCACGGGA.......................................................................	25	1	120.00	3.00	0.00	0.00	85.00	32.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	118.00	36.00	57.00	1.00	15.00	9.00
...................................................AATGGCACTGGAxxAATTCACGGG........................................................................	22	1	118.00	22.00	0.00	0.00	77.00	19.00
...................................................AATGGCACTGGAAGAATTCATGG.........................................................................	23	1	113.00	31.00	8.00	0.00	59.00	15.00
...................................................AGTGGCACTGGAAGAATTCACGG.........................................................................	23	1	111.00	23.00	3.00	1.00	60.00	24.00
...................................................AATGACACTGGAAGAATTCACGGG........................................................................	24	1	110.00	37.00	3.00	7.00	50.00	13.00
...................................................AATGGCACTGGAAGAATTCACGGAA.......................................................................	25	1	108.00	12.00	3.00	0.00	47.00	46.00
.......................................................GCACTGGAAGAATTCACGG.........................................................................	19	1	106.00	2.00	1.00	0.00	84.00	19.00
...................................................AATGGCACTGGAAGAATTCGCGG.........................................................................	23	1	104.00	41.00	9.00	0.00	37.00	17.00
...................................................AATGGCACTGGAAGAATTCAAGG.........................................................................	23	1	101.00	30.00	6.00	1.00	33.00	31.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	101.00	36.00	32.00	4.00	16.00	13.00
..................................................CAATGGCACTGGAAGAATTCACGGG........................................................................	25	1	101.00	54.00	11.00	6.00	17.00	13.00
...................................................AATGGCACTGGAAAAATTCACGG.........................................................................	23	1	100.00	56.00	3.00	0.00	29.00	12.00
...................................................AATGGCACTCGAAGAATTCACGGG........................................................................	24	1	99.00	33.00	7.00	13.00	32.00	14.00
...................................................AATGGCACTGGAAGAATTCCCGGGA.......................................................................	25	1	99.00	1.00	1.00	1.00	80.00	16.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	98.00	51.00	19.00	0.00	16.00	12.00
...................................................AATGGCACTGGAAGAATTCACGTT........................................................................	24	1	98.00	84.00	8.00	3.00	2.00	1.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	97.00	8.00	71.00	10.00	6.00	2.00
...................................................AATGGCACTGGAAGACTTCACGGG........................................................................	24	1	96.00	73.00	13.00	6.00	3.00	1.00
...................................................AATCGCACTGGAAGAATTCACGG.........................................................................	23	1	96.00	20.00	2.00	0.00	59.00	15.00
...................................................AATGGCACTGGAAGAATACACGG.........................................................................	23	1	96.00	84.00	4.00	0.00	6.00	2.00

droMoj3

AGTT-T---GTT--T----------TCGTTGTTTCGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTCTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTTCAAC-------	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	109379.00	76753.00	7999.00	3894.00	20733.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	39709.00	27589.00	7838.00	3507.00	775.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	26639.00	22630.00	2218.00	860.00	931.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	20761.00	12561.00	5567.00	2522.00	111.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	13927.00	10419.00	2224.00	1091.00	193.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	7418.00	6495.00	474.00	212.00	237.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	6304.00	3960.00	1613.00	723.00	8.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	2994.00	2457.00	303.00	130.00	104.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	1472.00	1320.00	105.00	46.00	1.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	658.00	519.00	76.00	45.00	18.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	412.00	84.00	15.00	16.00	297.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	395.00	369.00	18.00	6.00	2.00
...................................................AATGGCACTGGAAGCATTCACGGG........................................................................	24	1	350.00	12.00	34.00	98.00	206.00
...................................................AATGGCACTGGCAGAATTCACGGG........................................................................	24	1	348.00	12.00	27.00	77.00	232.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	301.00	236.00	41.00	22.00	2.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	269.00	190.00	48.00	31.00	0.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	252.00	101.00	56.00	61.00	34.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	242.00	36.00	143.00	61.00	2.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	238.00	144.00	22.00	36.00	36.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	194.00	38.00	82.00	10.00	64.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	185.00	113.00	33.00	17.00	22.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	177.00	144.00	19.00	8.00	6.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	162.00	135.00	22.00	5.00	0.00
...................................................AATGGCACTGGAAGAATTCACCGG........................................................................	24	1	152.00	43.00	23.00	25.00	61.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	142.00	5.00	16.00	46.00	75.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	140.00	63.00	12.00	11.00	54.00
...................................................AATGGCACTGGGAGAATTCACGGG........................................................................	24	1	137.00	33.00	17.00	5.00	82.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	133.00	15.00	43.00	8.00	67.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	132.00	127.00	3.00	1.00	1.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	129.00	89.00	16.00	6.00	18.00
...................................................AATGGCACTGGAAGCATTCAC...........................................................................	21	1	129.00	5.00	45.00	69.00	10.00
...................................................AATGGCACTGGAAGGATTCACGGG........................................................................	24	1	127.00	20.00	19.00	12.00	76.00
...................................................AATGGCACTGGAAGCATTCA............................................................................	20	1	120.00	2.00	43.00	74.00	1.00
...................................................AATGGCACTGGAAGAATTCT............................................................................	20	1	119.00	68.00	33.00	18.00	0.00
...................................................AATGGCACTGGCAGAATTCAC...........................................................................	21	1	113.00	1.00	37.00	66.00	9.00
...................................................AATGGCACTGGAAGAATTT.............................................................................	19	1	109.00	64.00	32.00	13.00	0.00
...................................................AATGGCACTGGAAGAATTCACGGGTTT.....................................................................	27	1	108.00	98.00	7.00	3.00	0.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	108.00	106.00	1.00	0.00	1.00
...................................................AATGGCACTGGAGGAATTCACGGG........................................................................	24	1	104.00	64.00	16.00	4.00	20.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	101.00	26.00	11.00	3.00	61.00
...................................................AATGGCACTGGAAGAATTCGCGGG........................................................................	24	1	101.00	46.00	12.00	5.00	38.00
...................................................AATGGCACTAGAAGAATTCACGGG........................................................................	24	1	99.00	26.00	7.00	20.00	46.00
...................................................GATGGCACTGGAAGAATTCACGGG........................................................................	24	1	98.00	64.00	8.00	6.00	20.00
...................................................AATGGCGCTGGAAGAATTCACGGG........................................................................	24	1	96.00	49.00	11.00	6.00	30.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	94.00	87.00	0.00	1.00	6.00
...................................................AATGGCACTGGCAGAATTCA............................................................................	20	1	90.00	1.00	30.00	55.00	4.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	87.00	60.00	9.00	4.00	14.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	87.00	25.00	42.00	16.00	4.00
...................................................AATGGCACTGGAAGAATTCAT...........................................................................	21	1	84.00	22.00	40.00	20.00	2.00
...................................................AATAGCACTGGAAGAATTCACGGG........................................................................	24	1	82.00	42.00	11.00	9.00	20.00
...................................................AATGGCACTGGAAGAATTCATGGG........................................................................	24	1	82.00	45.00	11.00	3.00	23.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	82.00	69.00	7.00	6.00	0.00
...................................................AATGGCACTGGAAGACTTCACGGG........................................................................	24	1	81.00	17.00	26.00	13.00	25.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	81.00	42.00	12.00	5.00	22.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	80.00	16.00	7.00	1.00	56.00
...................................................AATGGCACTGGAAGTATTCACGGG........................................................................	24	1	80.00	5.00	13.00	9.00	53.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	78.00	41.00	11.00	8.00	18.00
...................................................AATGGCACTTGAAGAATTCACGGG........................................................................	24	1	76.00	64.00	2.00	4.00	6.00
...................................................AATGGCACTGGAAGAATTCCC...........................................................................	21	1	74.00	2.00	20.00	47.00	5.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	73.00	34.00	10.00	7.00	22.00
...................................................AATGGCACTGGAAGAGTTCACGGG........................................................................	24	1	71.00	29.00	12.00	5.00	25.00
...................................................AATGGCACTGGACGAATTCACGGG........................................................................	24	1	71.00	7.00	9.00	7.00	48.00
...................................................AATGGCACTGTAAGAATTCACGGG........................................................................	24	1	68.00	59.00	4.00	3.00	2.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	67.00	55.00	6.00	4.00	2.00
...................................................AAGGGCACTGGAAGAATTCAC...........................................................................	21	1	67.00	7.00	47.00	13.00	0.00
...................................................AATGGCACTGGGAGAATTCAC...........................................................................	21	1	66.00	10.00	29.00	21.00	6.00
...................................................AATGGTACTGGAAGAATTCACGGG........................................................................	24	1	63.00	35.00	5.00	3.00	20.00
..................................................CAATGGCACTGGAAGAATTCACGGG........................................................................	25	1	62.00	35.00	4.00	5.00	18.00
...................................................AATGGCACTGGAAGAATTAACGGG........................................................................	24	1	61.00	31.00	10.00	3.00	17.00
...................................................AATGGCACTGGGAGAATTCA............................................................................	20	1	60.00	10.00	27.00	22.00	1.00
...................................................AATTGCACTGGAAGAATTCAC...........................................................................	21	1	60.00	54.00	4.00	2.00	0.00
...................................................AGTGGCACTGGAAGAATTCACGGG........................................................................	24	1	57.00	26.00	8.00	6.00	17.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	55.00	45.00	6.00	3.00	1.00
...................................................AATGTCACTGGAAGAATTCAC...........................................................................	21	1	55.00	51.00	2.00	2.00	0.00
...................................................AATGGCACTGGAAGACTTCAC...........................................................................	21	1	54.00	5.00	26.00	21.00	2.00
...................................................AATGGCACTCGAAGAATTCACGGG........................................................................	24	1	54.00	27.00	11.00	1.00	15.00
...................................................AATGGCACTGGTAGAATTCACGGG........................................................................	24	1	53.00	4.00	15.00	5.00	29.00
...................................................AATGGCACTGGAAGAACTCACGGG........................................................................	24	1	53.00	15.00	12.00	8.00	18.00
...................................................AATGACACTGGAAGAATTCACGGG........................................................................	24	1	52.00	35.00	4.00	0.00	13.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	52.00	29.00	7.00	0.00	16.00
...................................................AATGGCACTGGAAGAATTCACGGGAA......................................................................	26	1	52.00	43.00	6.00	2.00	1.00
....................................................TTGGCACTGGGAGAATTCAC...........................................................................	20	1	51.00	11.00	23.00	17.00	0.00
...................................................AATGGCACTGGAAGAATTCACTG.........................................................................	23	1	50.00	32.00	5.00	12.00	1.00
...................................................AATGCCACTGGAAGAATTCACGGG........................................................................	24	1	50.00	42.00	4.00	0.00	4.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	49.00	21.00	8.00	3.00	17.00
...................................................AATGGCATTGGAAGAATTCACGGG........................................................................	24	1	49.00	25.00	7.00	3.00	14.00
....................................................TTGGCACTGGGAGAATTCA............................................................................	19	1	47.00	9.00	25.00	13.00	0.00
...................................................AATGGCACTGGAATAATTCACGGG........................................................................	24	1	47.00	38.00	0.00	2.00	7.00
...................................................AATGGCAATGGAAGAATTCACGGG........................................................................	24	1	47.00	11.00	13.00	3.00	20.00
...................................................AATGGCACTGAAAGAATTCACGGG........................................................................	24	1	46.00	29.00	1.00	3.00	13.00
...................................................AATGGCACTGGAGGAATTCAC...........................................................................	21	1	46.00	23.00	11.00	11.00	1.00
...................................................AATGGCACTTGAAGAATTCAC...........................................................................	21	1	45.00	41.00	1.00	3.00	0.00
...................................................AATGGCGCTGGAAGAATTCAC...........................................................................	21	1	45.00	30.00	9.00	5.00	1.00
...................................................AAAGGCACTGGAAGAATTCACGGG........................................................................	24	1	43.00	7.00	16.00	5.00	15.00
...................................................ACTGGCACTGGAAGAATTCACGGG........................................................................	24	1	43.00	12.00	1.00	11.00	19.00
...................................................AATGGCACTAGAAGAATTCAC...........................................................................	21	1	42.00	11.00	12.00	19.00	0.00
...................................................AATGGCACTGGAAGCATTC.............................................................................	19	1	42.00	0.00	16.00	26.00	0.00
...................................................AATGGCACTGGAAGGATTCAC...........................................................................	21	1	42.00	8.00	19.00	12.00	3.00
...................................................AATGGCACTxGAAGAATTCACGGG........................................................................	23	1	41.00	36.00	4.00	0.00	1.00
...................................................AATGGCACTGGAAAAATTCACGGG........................................................................	24	1	39.00	25.00	2.00	4.00	8.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	39.00	5.00	6.00	28.00	0.00

droGri2

ATTTTTTTCA----AGTGATTTTTCTTGTTGTTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAA--CAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-TATTACGTGCAGA-------	Size	Hit Count	Total Norm	V109 Male body
...................................................AATGGCACTGGAAGAATTCACGGG........................................................................	24	1	3562.00	3562.00
...................................................AATGGCACTGGAAGAATTCACG..........................................................................	22	1	3497.00	3497.00
...................................................AATGGCACTGGAAGAATTCAC...........................................................................	21	1	2257.00	2257.00
...................................................AATGGCACTGGAAGAATTCA............................................................................	20	1	1735.00	1735.00
...................................................AATGGCACTGGAAGAATTCACGG.........................................................................	23	1	1588.00	1588.00
...................................................AATGGCACTGGAAGAATTC.............................................................................	19	1	530.00	530.00
...................................................AATGGCACTGGAAGAATTCACGGGT.......................................................................	25	1	117.00	117.00
...................................................AATGGCACTGGAAGAATTCACGGGA.......................................................................	25	1	94.00	94.00
...................................................AATGGCACTGGAAGAATTCACGGT........................................................................	24	1	45.00	45.00
...................................................AATGGCACTGGAAGAATCCACG..........................................................................	22	1	45.00	45.00
...................................................AATGGCACTGGAAGAATCCACGGG........................................................................	24	1	41.00	41.00
...................................................AATGGCACTGGAAGAATACACGGG........................................................................	24	1	36.00	36.00
...................................................AATGGCACTGGAAGAATCCAC...........................................................................	21	1	31.00	31.00
...................................................AATGGCACTGGAAGAATTCACGCG........................................................................	24	1	30.00	30.00
...................................................AATGGCACTGGAAGAATACACG..........................................................................	22	1	29.00	29.00
...................................................AATGGCACTGGAAGAATTCACT..........................................................................	22	1	28.00	28.00
...................................................AATGGCACTGGAAGAATTCACGTG........................................................................	24	1	26.00	26.00
..............................................................................................CGTGATCTCTTAGTGGCATCTA...............................	22	1	24.00	24.00
...................................................AATGGCACTGGAAGAATTCACGAG........................................................................	24	1	23.00	23.00
...................................................AATGGCACTGGAAGAATTCACGT.........................................................................	23	1	23.00	23.00
...................................................AATGGCCCTGGAAGAATTCACG..........................................................................	22	1	19.00	19.00
...................................................AATGGCACCGGAAGAATTCACGGG........................................................................	24	1	18.00	18.00
...................................................AATGGCACTGGAAGAATGCACG..........................................................................	22	1	16.00	16.00
...................................................AATGGCACTGGAAGAATCCA............................................................................	20	1	15.00	15.00
...................................................AATGGCACCGGAAGAATTCACG..........................................................................	22	1	15.00	15.00
...................................................AATGGCACTGGAAGAATTCACA..........................................................................	22	1	15.00	15.00
...................................................AATGGCACTGGAAGAATGCAC...........................................................................	21	1	15.00	15.00
...................................................AATGGCACTGGAAGAATACAC...........................................................................	21	1	15.00	15.00
...................................................AATGGCACTGGAAGAATACA............................................................................	20	1	13.00	13.00
...................................................AATGGCACTGGAAGAATCCACGG.........................................................................	23	1	12.00	12.00
...................................................AACGGCACTGGAAGAATTCACG..........................................................................	22	1	12.00	12.00
...................................................AATGGCACTGGAAGAATTCACGC.........................................................................	23	1	12.00	12.00
...................................................AATGGCCCTGGAAGAATTCACGGG........................................................................	24	1	12.00	12.00
...................................................AATGGCACTGGAAGAATGCACGGG........................................................................	24	1	11.00	11.00
...................................................AATGGAACTGGAAGAATTCACG..........................................................................	22	1	11.00	11.00
...................................................AATGGCCCTGGAAGAATTCAC...........................................................................	21	1	11.00	11.00
...................................................AATGGCACTGGAAGAATTCACGA.........................................................................	23	1	11.00	11.00
...................................................AATGGTACTGGAAGAATTCACGGG........................................................................	24	1	10.00	10.00
...................................................AATGGCACAGGAAGAATTCACG..........................................................................	22	1	10.00	10.00
...................................................AACGGCACTGGAAGAATTCACGGG........................................................................	24	1	10.00	10.00
...................................................AATGGAACTGGAAGAATTCACGGG........................................................................	24	1	9.00	9.00
...................................................AATGGCACCGGAAGAATTCACGG.........................................................................	23	1	9.00	9.00
...................................................AATGGAACTGGAAGAATTCAC...........................................................................	21	1	9.00	9.00
...................................................AATGGCACCGGAAGAATTCAC...........................................................................	21	1	9.00	9.00
...................................................AATGGCACTGGAAGAATGCACGG.........................................................................	23	1	9.00	9.00
...................................................AATGGCGCTGGAAGAATTCACG..........................................................................	22	1	9.00	9.00
...................................................AATGCCACTGGAAGAATTCACG..........................................................................	22	1	9.00	9.00
...................................................AATGGCCCTGGAAGAATTCA............................................................................	20	1	8.00	8.00
...................................................AATGGCACCGGAAGAATTCA............................................................................	20	1	8.00	8.00
...................................................AATGGCACAGGAAGAATTCACGGG........................................................................	24	1	8.00	8.00
...................................................AATCGCACTGGAAGAATTCACGGG........................................................................	24	1	8.00	8.00
...................................................AATGGGACTGGAAGAATTCACGGG........................................................................	24	1	8.00	8.00
....................................................AATGCACTGGAAGAATTCACG..........................................................................	21	1	7.00	7.00
...................................................AATGGCACTGGAAGAATTCACGGTT.......................................................................	25	1	7.00	7.00
...................................................AATGGCACTGGAAGAATACACGG.........................................................................	23	1	7.00	7.00
...................................................AATGGCACTGGAAGAATT..............................................................................	18	1	7.00	7.00
...................................................AATGGAACTGGAAGAATTCACGG.........................................................................	23	1	7.00	7.00
...................................................AATGGCACTGGAAGAATTCACGGGTT......................................................................	26	1	7.00	7.00
...................................................ACTGGCACTGGAAGAATTCACGGG........................................................................	24	1	6.00	6.00
...................................................AATGGCACTGGAAGAATTCAA...........................................................................	21	1	6.00	6.00
...................................................AATGGCCCTGGAAGAATTCACGG.........................................................................	23	1	6.00	6.00
...................................................AATTGCACTGGAAGAATTCAC...........................................................................	21	1	6.00	6.00
..............................................................................................CGTGATCTCTTAGTGGCATCT................................	21	1	6.00	6.00
...................................................AATGGGACTGGAAGAATTCACG..........................................................................	22	1	6.00	6.00
...................................................ACTGGCACTGGAAGAATTCACG..........................................................................	22	1	6.00	6.00
...................................................AAAGGCACTGGAAGAATTCACGGG........................................................................	24	1	6.00	6.00
...................................................AATGGCACTGGAAGAATTCACAGG........................................................................	24	1	6.00	6.00
...................................................AATCGCACTGGAAGAATTCAC...........................................................................	21	1	6.00	6.00
...................................................AAGGGCACTGGAAGAATTCACGGG........................................................................	24	1	5.00	5.00
...................................................AATGGCACTGGAAGACTTCACG..........................................................................	22	1	5.00	5.00
....................................................ATGGCACTGGAAGAATTCACGGG........................................................................	23	1	5.00	5.00
...................................................AATGGCACTGGAAGAATTCACGGA........................................................................	24	1	5.00	5.00
...................................................AATGGCACTGGAAGAATTCACC..........................................................................	22	1	5.00	5.00
...................................................AATGGCACTGGAAGAATTCACGGC........................................................................	24	1	5.00	5.00
...................................................AATGGCACTGGAAGAATCC.............................................................................	19	1	5.00	5.00
...................................................AATGGAACTGGAAGAATTCA............................................................................	20	1	5.00	5.00
...................................................AATGGCACTGGAAGAACTCAC...........................................................................	21	1	5.00	5.00
...................................................AATGGCACTGGAAGAATTCCCGGG........................................................................	24	1	5.00	5.00
...................................................AATGGGACTGGAAGAATTCAC...........................................................................	21	1	5.00	5.00
...................................................AATGGCTCTGGAAGAATTCACG..........................................................................	22	1	5.00	5.00
...................................................AAAGGCACTGGAAGAATTCACG..........................................................................	22	1	5.00	5.00
...................................................AATGGCACTGGAAGAATTCACTGG........................................................................	24	1	5.00	5.00
...................................................AATGGCACTGGAAGAATTCACGGGC.......................................................................	25	1	5.00	5.00
...................................................AATGGCACTGGAAGAATTCAAGGG........................................................................	24	1	5.00	5.00
...................................................AATTGCACTGGAAGAATTCACGGG........................................................................	24	1	5.00	5.00
...................................................AATGGTACTGGAAGAATTCAC...........................................................................	21	1	5.00	5.00
...................................................AACGGCACTGGAAGAATTCAC...........................................................................	21	1	5.00	5.00
...................................................AATGGCACTGGAAGAATGCA............................................................................	20	1	5.00	5.00
...................................................AATGGCTCTGGAAGAATTCAC...........................................................................	21	1	4.00	4.00
...................................................AATGGCACTGCAAGAATTCACGGG........................................................................	24	1	4.00	4.00
....................................................AATGCACTGGAAGAATTCACGGG........................................................................	23	1	4.00	4.00
...................................................AATGGCACTGGAAGAATTCCCG..........................................................................	22	1	4.00	4.00
...................................................ACTGGCACTGGAAGAATTCACGG.........................................................................	23	1	4.00	4.00
...................................................AATGGGACTGGAAGAATTCACGG.........................................................................	23	1	4.00	4.00
...................................................AATGGCACGGGAAGAATTCACGGG........................................................................	24	1	4.00	4.00
...................................................AATGGTACTGGAAGAATTCACG..........................................................................	22	1	4.00	4.00
...................................................AATGGCTCTGGAAGAATTCACGG.........................................................................	23	1	4.00	4.00
...................................................AATGGCACTGGAAGAATTCAAG..........................................................................	22	1	4.00	4.00
...................................................AATGGCACTGGAAGAATAC.............................................................................	19	1	4.00	4.00
...................................................AATGGCACTGGAAGCATTCACG..........................................................................	22	1	4.00	4.00
...................................................AATGTCACTGGAAGAATTCACGGG........................................................................	24	1	4.00	4.00

12-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droAna3	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image