Possible Orthologs for dme-mir-2282

droSim1 - 0 hit found

droSec1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
25	super_2:3404661-3404801 -	90.99	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGC----TTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGCTGCCTGCATAAGGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTGCTTCGTTGGAAAAGCGGTGAGCTAAAAATAGATTTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA Size Hit Count Total Norm V113 Male body V114 Embryo V115 Head ..............................................................................................AAAAAGAGATTTCGGTTT............................. 18 1 2.00 0.00 0.00 2.00

droYak2 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
22	chr3L:3959855-3959989 -	89.05	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGGGCTGCAT--ATAAGGCTGTGGCTTTCCGCTTCTATTTTGTGCTCACTGTCTTGTGCGGCGTTGGAAAATCGGTGAGCTAAAAATAGATTTCGGTTGCCACGCTTCGTGGAAAATGAGGAAAATTA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head TGGGGCAGTxAGGCTGCAT--AT.................................................................................................................. 20 1 1.00 0.00 0.00 0.00 1.00 0.00 .....................................................CTCTCTGTCTGGTGCGGC.................................................................. 18 1 1.00 0.00 1.00 0.00 0.00 0.00
3	chr3R:18765097-18765116 +	10.37	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA ---------------------------------------------------------------------------------------------------------------------AAAAGAAGTGTAGGAAATTA Size Hit Count Total Norm V046 Embryo V052 Head V120 Male body V058 Head M026 Head		None

droEre2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
19	scaffold_4784:6102142-6102274 -	87.01	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGCT----GCATAAGGCTGTGGCTTTCCGCTTCTATTTTGTGTTCACTGTCCTGCGTTTCGTTGGAAAATCGGTGAGCCAAAAATAGATTTCGGTTGCCACGCTTCGAGGAAAATGCGGAAAATTA Size Hit Count Total Norm V040 Embryo V060 Head V047 Embryo V108 Head ...........................................................................GAAAATCGGTGAGCCAAAAATA........................................ 22 1 1.00 0.00 0.00 0.00 1.00 .......................................................................................GCCAAAAATAGATTTCGG................................ 18 1 1.00 0.00 0.00 0.00 1.00

droFic1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scf7180000454105:1746613-1746784 -	45.78	TGGGGCAGTGGAGCTGCC----------------------------------------TG---CATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGCCATGGGGACGTGGGATCGGGGATCGGGGTGCGGGGACTGGGATGTGCACTATAAGACTGCGGCTTTCCGCCTCCTTTTCCCTTTTTTCG--------TTCGTCGGAAAAGCGTCGAGCTAAAAATAGATTTCGGTTGCCACGCTTCGGGGAAAATGAGGAAAATTA Size Hit Count Total Norm

droEug1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
25	scf7180000409466:1140592-1140735 -	73.84	TGGGGCAGTGGAGCTGCCTG----------CATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTG-CCTTGTGCTTC-GTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGCTCTT-GGGATATGCACTATAAGGCTGTGGCTTTCCGCTTCTATTTTTC----TCTGTTCTTGTTGTTGTTGTGGAAAATCGGTGAGCTAAAAATAGATTTCGGTTGCCACGCTTCGAGGAAAATGAGGAAAATTA Size Hit Count Total Norm

droBia1 - 4 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
119	scf7180000302428:2784843-2785001 -	64.08	TGGGGCAGTGGAGCTGCCTGCA-------------TAACGCTGTGGCTTTCCGCTTCTATTTTTC----GTTCACTGCC-----TTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGCTCTGGGCATGGATATGCACTATGAGGCCGTGGCTTTCCGCTTCTTTTTTTTACATCTTTACGGTTTTTTGTTGTTGTTTGTTGGAAAATCGGTGAGCTAAAAATAGATTTCGGTTGCCACGCTTCGAGGAAAATGAGGAAAATTA Size Hit Count Total Norm
118	scf7180000302428:2784622-2784783 -	36.52	TGGGGCAGTG---GAGCTGCCTGCATAACGCTGTGGC--------------------------------TTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTG-CCACGCTTCAAG--GGAAATGAGGAAAATTA CTGGGTTGTCTTTTTGCTGCTGGTGTGTGTCTGGTGTTTTGGGGGTGTGTTCGTGACACGAAAAGTTGTTCTTGGCTCTT----------AATTGGTTGAGAGTCCGTTTGATATTT--TGAATT-AAAATATATTTTAGCAGTCCACGTTTGATGTGGGTGTTTAAACATACTT Size Hit Count Total Norm
62	scf7180000302428:8002552-8002575 +	10.67	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA GCAG----------------------------------------------------------------------------------------------------------------CAGGGCAAAAAAAGAAAAAC- Size Hit Count Total Norm		None
1	scf7180000301140:31204-31222 +	8.89	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA ----------------------------------------------------------------------------------------------------------------------ATGCAAGTGATGAGAAATG Size Hit Count Total Norm		None

droTak1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
6	scf7180000415855:71929-72087 +	63.01	TGGGGCAGTGGAGCTGCCTGCA-------------TAACGCTG--TGGCTTTCCGCTTCTATTTTTCGTTCACTGC-------CTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGTTCTGTGCATGGATATGCACTATAAGGCTGTGTGGCTTTCCGCTTCTCTTTTTACTTTACTTTACTTTTTTTCGTTGTTTGTTGGAAAATCGGTGAGCTAAAAATAGATTTCGGTTGCCACGCTTCGAGGAAAATGAGGAAAATTA Size Hit Count Total Norm

droEle1 - 2 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
9	scf7180000491249:1811852-1812027 +	47.94	TGGGGCAGTGGAGCTGCCTGCAT------------------AACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCT-------------------------------------TCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGTAGTGAAGCTCTGGGGATATGGATATTATGCACTACAAGACCATGGCTTTCCGCTTCT----------------CTTCTCCTTTTTTCCTTTTATTTTTTTTGTTGTTTTTGTTTTTGTTCGTTGGAAAATCCGTGAGCTAAAAATAGATTTCGGTTGCCACGCTTCGTGGAAAATGAGGAAAATTA Size Hit Count Total Norm
1	scf7180000490214:1151825-1151928 +	34.81	TGGGGCAGTGGAGCTGCCTGCATA-ACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA AGGTGCTGCTAGATTGCCGAGGCACACGAATTAACTGCTTGCACAATTGTTTTACACATTGTTGTCTGGGTTGTTGTTAAGACAGCAGAAGGGAAATGGAAATC---------------------------------- Size Hit Count Total Norm

droRho1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000776556:359-515 +	61.65	TGGGGCAGTGGAGCT-------------------GC-CTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGT-------GCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGCTCTGGGGATATGGATATTATGCACTGC--AAGACTGTGGCTTTCCGCTTCTTT--TTC--CCTCTTCCTTTTTGTTTTTTGTTCGTTGGA-AATCGGCGAGCTAAAAATAGATTTCGGTTGCCACGCTTCGAGGAAAATGAGGAAAATTA Size Hit Count Total Norm

droKik1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
13	scf7180000302577:903953-904126 +	45.36	TGGGGCAGTGGAGCTGCCTGCATAA-CG---------CTGTGGCTTTCCGCTTCTA---------------TTTTTCGTTCAC-------------TGCCTTGTGC--------TTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGCAGTGGAGCTCCCGGGATATGCACTGTGGGGTCTGCGGCTTTCCGCTTCTACTCTATATTTCTTCATTTTTTGTTCTTTACTTTTTTTGTTTGCCTTTGGCTGTCGCTTTTTGTTGGAAATTCGGCAAGCTAAAAATAGATTTCGGTTGCCACGCTTCAAA---------GAAAATTA Size Hit Count Total Norm

droAna3 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
68	scaffold_13337:10031066-10031241 +	40.44	TGGG-GCAGT-G-------GAG--------------------------------------------CTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGGCAGGTGGTGGCAGGAGGTGGCCGGAGGTGGTGGTAGGTGGGTGGGGGTGGTGTATGTAGGGGGCCTGTAT------GTGGCTTTCCGCTTCTACCATTT-TTTTTTGTTGGAGGGTTCAGTGGAAATTCGGCGAGCTAAAAATATAATTCGGTTGCCACGCTTC---GGAAA----GAGAATTA Size Hit Count Total Norm V105 Male body V106 Head V055 Unknown V039 Embryo ................................GTGGTGGTAxGTGGGTGGG........................................................................................................................................... 18 1 78.00 6.00 72.00 0.00 0.00 ......................................GTGGGTGGGTGGGGATGG...................................................................................................................................... 18 1 78.00 2.00 76.00 0.00 0.00 ...............................GGTGGTGGGTGGTGGGTG............................................................................................................................................. 18 1 71.00 0.00 70.00 1.00 0.00 ................................GTGGTGGTAxGTGGGTGGGA.......................................................................................................................................... 19 1 65.00 11.00 54.00 0.00 0.00 .............................GTGGTGGTGGTGGGTGGG............................................................................................................................................... 18 1 62.00 0.00 62.00 0.00 0.00 .............................GTGGTGGTGGTGGGTGGGT.............................................................................................................................................. 19 1 46.00 0.00 46.00 0.00 0.00 ................................GAGGTGGTAGGTGGGTGGGTG......................................................................................................................................... 21 1 32.00 3.00 29.00 0.00 0.00 ................................GTGGTGGTxGGTGGGCGGG........................................................................................................................................... 18 1 30.00 0.00 30.00 0.00 0.00 ................................GTGGTGGTxGGTGGGCGGGGG......................................................................................................................................... 20 1 29.00 0.00 29.00 0.00 0.00 ................................GTGGTGGTxGGTGGGTGGGGA......................................................................................................................................... 20 1 27.00 2.00 25.00 0.00 0.00 ................................GTGGTGGTxGGTGGGTGGGG.......................................................................................................................................... 19 1 16.00 1.00 15.00 0.00 0.00 ...................................GTGGTxGGTGGGTGGGGAT........................................................................................................................................ 18 1 13.00 0.00 13.00 0.00 0.00 ................................GTGGTGGTxGGTGGGCGGGG.......................................................................................................................................... 19 1 10.00 0.00 10.00 0.00 0.00 ................................GAGGTGGTAGGTGGGTGGGT.......................................................................................................................................... 20 1 9.00 0.00 9.00 0.00 0.00 ..................................GGTGGTGGGTGGGTGGTG.......................................................................................................................................... 18 1 8.00 0.00 8.00 0.00 0.00 ................................GTGGTGGTxGGTGGGTGGGGAT........................................................................................................................................ 21 1 8.00 0.00 8.00 0.00 0.00 ...................................GTGGGAGGTGGGTGGGGT......................................................................................................................................... 18 1 8.00 1.00 7.00 0.00 0.00 ................................GTGGTGGCAxGTGGGTGGG........................................................................................................................................... 18 3 2.67 0.00 2.67 0.00 0.00 ................................GTGGTGGTGGGTGGGTGGA........................................................................................................................................... 19 1 7.00 0.00 7.00 0.00 0.00 ................................GAGGTGGTAGGTGGGTGGG........................................................................................................................................... 19 1 7.00 0.00 7.00 0.00 0.00 ...................................GTGGTGGGTGGGTGGTGG......................................................................................................................................... 18 1 7.00 0.00 7.00 0.00 0.00 ................................GTGGTGGTAxGTGGGTTGGG.......................................................................................................................................... 19 1 6.00 0.00 6.00 0.00 0.00 ................................GTGGTGGTGGGTGGGTGG............................................................................................................................................ 18 1 5.00 0.00 5.00 0.00 0.00 ..................................GGTGGTCGGTGGGTGGGT.......................................................................................................................................... 18 1 5.00 0.00 5.00 0.00 0.00 ....................................TGGGAxGTGGGTGGGGGTGG...................................................................................................................................... 19 2 2.50 0.00 2.50 0.00 0.00 ......................................GTGGGTGGGTGGTGGTGG...................................................................................................................................... 18 1 5.00 0.00 5.00 0.00 0.00 ......................................GTGGGTGGGTxxGGGTGGTG.................................................................................................................................... 18 1 5.00 0.00 5.00 0.00 0.00 ................................GTGGTGGTAxGTGGGTGGTGG......................................................................................................................................... 20 1 5.00 0.00 5.00 0.00 0.00 ..................................GGTGGTxGGTGGGTGGGGA......................................................................................................................................... 18 1 5.00 1.00 4.00 0.00 0.00 ................................GTGGTGGTTGGTGGGTGGGT.......................................................................................................................................... 20 1 5.00 0.00 5.00 0.00 0.00 ...................................GTGGTAGGTGGGTxxGGGTGGTG.................................................................................................................................... 21 2 2.50 0.50 2.00 0.00 0.00 ............................GGGGGTGGTGGTxGGTGGGT.............................................................................................................................................. 19 1 4.00 0.00 4.00 0.00 0.00 ................................GTGGTGGTCGGTGGGTGGGT.......................................................................................................................................... 20 1 4.00 1.00 3.00 0.00 0.00 ..........................................GTGGGTGGTGGTGGTGGAT................................................................................................................................. 19 1 4.00 0.00 4.00 0.00 0.00 ................................GTGGTGGTAxGTGGGTGGGT.......................................................................................................................................... 19 1 4.00 0.00 4.00 0.00 0.00 ................................GTGGTGGTAGGTGGGTGGGGG......................................................................................................................................... 21 1 4.00 0.00 4.00 0.00 0.00 ................................GTGGTGGTxGGTGGGTGGGA.......................................................................................................................................... 19 2 2.00 0.00 2.00 0.00 0.00 ......................................GTGGGTGGGTGGTGGTGGT..................................................................................................................................... 19 1 3.00 0.00 3.00 0.00 0.00 ...................................GTGGGAGGTGGGTGGGGG......................................................................................................................................... 18 1 3.00 0.00 3.00 0.00 0.00 ...........................................TGGGxGGGGGTGGTGCATG................................................................................................................................ 18 1 3.00 0.00 1.00 2.00 0.00 ..................................GTTGGTTGGTGGGTGGGG.......................................................................................................................................... 18 1 3.00 0.00 3.00 0.00 0.00 ................................GTGGTGGTxGGTGGGTGGT........................................................................................................................................... 18 4 0.75 0.00 0.75 0.00 0.00 ...............................GGTGGTGGGAGGTGGGAG............................................................................................................................................. 18 1 3.00 0.00 3.00 0.00 0.00 ...............................GGTGGTGGTGGGTGGGTG............................................................................................................................................. 18 1 3.00 0.00 3.00 0.00 0.00 ...............................AGTGGTGGTAxGTGGGTGGG........................................................................................................................................... 19 1 3.00 0.00 3.00 0.00 0.00 ................................GTGGTGGTGGTTGGGTGGG........................................................................................................................................... 19 1 3.00 0.00 3.00 0.00 0.00

droBip1 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
1	scf7180000396569:1328998-1329165 -	47.22	TGG-GGCA-GTGGAGCTGCCTGCATAACG--------------------CTGTGGCTTTCCGCTTCTATT-TTTCGTTCACTGCCT-TGT-----------------GCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGGGGCAGGTGGTGGTACCTCC-CAGGGGGGGTATGTAGGGGGCCTGTGTGTGGCTTTCCGCTTCTGCCTTTTCTTTTTCTTTCTATATATATTTTTTTTTGGGAGGGTTCACTGGAAATTCGGCGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAA---------GAGAATTA Size Hit Count Total Norm

dp4 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
5	chrXR_group8:5510827-5511013 -	32.34	TGG----------------------------------------GGCAGTGGAGCTGCCTGCA-TAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACT------------------GCCTTGTGCTTCGTTGGAAAA--TCGGTG-AGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAAT---GAGGAAAATTA TGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAGG----GTGACAGCACTCTCTCTAAGGCTTTCCGCTTT------TCGTTCTCTTTTTGTTGTTGTTGTTCTTTCTTTCGTTTTGGTGGAAATTTTCGTTGTATCTAAAAATAGACTTT-----TTGGGGTTCAAAGGAAATTTTGTGGGACAAAA Size Hit Count Total Norm V112 Male body V043 Embryo V051 Head M022 Male body ..TGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................ 24 35 0.71 0.11 0.00 0.60 0.00 ..............TGTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................... 24 35 0.71 0.11 0.00 0.60 0.00 ............TGTGTGTGTGTGTGTGTGTGTGTG...................................................................................................................................................................... 24 35 0.71 0.11 0.00 0.60 0.00 ................TGTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................. 24 35 0.71 0.11 0.00 0.60 0.00 ........TGTGTGTGTGTGTGTGTGTGTGTG.......................................................................................................................................................................... 24 35 0.71 0.11 0.00 0.60 0.00 TGTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................................. 24 35 0.71 0.11 0.00 0.60 0.00 ..................TGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................ 24 35 0.71 0.11 0.00 0.60 0.00 ....................TGTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................. 24 35 0.71 0.11 0.00 0.60 0.00 ..........TGTGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................................ 24 35 0.71 0.11 0.00 0.60 0.00 ......TGTGTGTGTGTGTGTGTGTGTGTG............................................................................................................................................................................ 24 35 0.71 0.11 0.00 0.60 0.00 ....TGTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................................. 24 35 0.71 0.11 0.00 0.60 0.00 ...GTGTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................................. 25 28 0.29 0.04 0.00 0.25 0.00 ...............GTGTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................. 25 28 0.29 0.04 0.00 0.25 0.00 .................GTGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................ 25 28 0.29 0.04 0.00 0.25 0.00 .GTGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................ 25 28 0.29 0.04 0.00 0.25 0.00 .....GTGTGTGTGTGTGTGTGTGTGTGTG............................................................................................................................................................................ 25 28 0.29 0.04 0.00 0.25 0.00 .......GTGTGTGTGTGTGTGTGTGTGTGTG.......................................................................................................................................................................... 25 28 0.29 0.04 0.00 0.25 0.00 ...................GTGTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................. 25 28 0.29 0.04 0.00 0.25 0.00 ...........GTGTGTGTGTGTGTGTGTGTGTGTG...................................................................................................................................................................... 25 28 0.29 0.04 0.00 0.25 0.00 .........GTGTGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................................ 25 28 0.29 0.04 0.00 0.25 0.00 .............GTGTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................... 25 28 0.29 0.04 0.00 0.25 0.00 ..TGTGTGTGTGTGTGTGTGTGTGTGT............................................................................................................................................................................... 25 27 0.22 0.04 0.00 0.19 0.00 .....GTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................................. 23 41 0.15 0.00 0.00 0.15 0.00 ........TGTGTGTGTGTGTGTGTGTGTGTGT......................................................................................................................................................................... 25 27 0.22 0.04 0.00 0.19 0.00 .GTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................................. 23 41 0.15 0.00 0.00 0.15 0.00 .....................GTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................. 23 41 0.15 0.00 0.00 0.15 0.00 ...................GTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................ 23 41 0.15 0.00 0.00 0.15 0.00 ...GTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................ 23 41 0.15 0.00 0.00 0.15 0.00 ................TGTGTGTGTGTGTGTGTGTGTGTGT................................................................................................................................................................. 25 27 0.22 0.04 0.00 0.19 0.00 ............TGTGTGTGTGTGTGTGTGTGTGTGT..................................................................................................................................................................... 25 27 0.22 0.04 0.00 0.19 0.00 .................GTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................. 23 41 0.15 0.00 0.00 0.15 0.00 ..........TGTGTGTGTGTGTGTGTGTGTGTGT....................................................................................................................................................................... 25 27 0.22 0.04 0.00 0.19 0.00 ....................TGTGTGTGTGTGTGTGTGTGTGTGT............................................................................................................................................................. 25 27 0.22 0.04 0.00 0.19 0.00 ..............TGTGTGTGTGTGTGTGTGTGTGTGT................................................................................................................................................................... 25 27 0.22 0.04 0.00 0.19 0.00 ....TGTGTGTGTGTGTGTGTGTGTGTGT............................................................................................................................................................................. 25 27 0.22 0.04 0.00 0.19 0.00 .............GTGTGTGTGTGTGTGTGTGTGTG...................................................................................................................................................................... 23 41 0.15 0.00 0.00 0.15 0.00 .......GTGTGTGTGTGTGTGTGTGTGTG............................................................................................................................................................................ 23 41 0.15 0.00 0.00 0.15 0.00 TGTGTGTGTGTGTGTGTGTGTGTGT................................................................................................................................................................................. 25 27 0.22 0.04 0.00 0.19 0.00 .........GTGTGTGTGTGTGTGTGTGTGTG.......................................................................................................................................................................... 23 41 0.15 0.00 0.00 0.15 0.00 ...............GTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................... 23 41 0.15 0.00 0.00 0.15 0.00 ..................TGTGTGTGTGTGTGTGTGTGTGTGT............................................................................................................................................................... 25 27 0.22 0.04 0.00 0.19 0.00 ......TGTGTGTGTGTGTGTGTGTGTGTGT........................................................................................................................................................................... 25 27 0.22 0.04 0.00 0.19 0.00 ...........GTGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................................ 23 41 0.15 0.00 0.00 0.15 0.00 .................GTACGTGTGTGTGTGTGTG...................................................................................................................................................................... 19 46 0.11 0.04 0.04 0.02 0.00 ......TGTGTGTGTGTGTGTGTGTGTGTGTG.......................................................................................................................................................................... 26 22 0.23 0.00 0.00 0.23 0.00 ..........TGTGTGTGTGTGTGTGTGTGTGTGTG...................................................................................................................................................................... 26 22 0.23 0.00 0.00 0.23 0.00 ..................TGTGTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................. 26 22 0.23 0.00 0.00 0.23 0.00 ...................GTACGTGTGTGTGTGTGTG.................................................................................................................................................................... 19 46 0.11 0.04 0.04 0.02 0.00 .....................GTACGTGTGTGTGTGTGTG.................................................................................................................................................................. 19 46 0.11 0.04 0.04 0.02 0.00 .........................GTACGTGTGTGTGTGTGTG.............................................................................................................................................................. 19 46 0.11 0.04 0.04 0.02 0.00 TGTGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................ 26 22 0.23 0.00 0.00 0.23 0.00 ..............TGTGTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................. 26 22 0.23 0.00 0.00 0.23 0.00 ...............GTACGTGTGTGTGTGTGTG........................................................................................................................................................................ 19 46 0.11 0.04 0.04 0.02 0.00 ..TGTGTGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................................. 26 22 0.23 0.00 0.00 0.23 0.00 ............TGTGTGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................... 26 22 0.23 0.00 0.00 0.23 0.00 ................TGTGTGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................ 26 22 0.23 0.00 0.00 0.23 0.00 .......................GTACGTGTGTGTGTGTGTG................................................................................................................................................................ 19 46 0.11 0.04 0.04 0.02 0.00 ...........GTACGTGTGTGTGTGTGTG............................................................................................................................................................................ 19 46 0.11 0.04 0.04 0.02 0.00 ....TGTGTGTGTGTGTGTGTGTGTGTGTG............................................................................................................................................................................ 26 22 0.23 0.00 0.00 0.23 0.00 ........TGTGTGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................................ 26 22 0.23 0.00 0.00 0.23 0.00 ....................TGTGTGTGTGTGTGTGTGTGTGTT.............................................................................................................................................................. 24 17 0.24 0.00 0.06 0.18 0.00 ................TGTGTGTGTGTGTGTGTGTGTGTT.................................................................................................................................................................. 24 17 0.24 0.00 0.06 0.18 0.00 ..................TGTGTGTGTGTGTGTGTGTGTGTT................................................................................................................................................................ 24 17 0.24 0.00 0.06 0.18 0.00 ............TGTGTGTGTGTGTGTGTGTGTG........................................................................................................................................................................ 22 49 0.08 0.00 0.00 0.08 0.00 ........TGTGTGTGTGTGTGTGTGTGTG............................................................................................................................................................................ 22 49 0.08 0.00 0.00 0.08 0.00 .......GTCTGTCTGTGTGTGTATGTG.............................................................................................................................................................................. 21 4 1.00 0.75 0.00 0.25 0.00 ................TGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................... 22 49 0.08 0.00 0.00 0.08 0.00 ......................TGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................. 22 49 0.08 0.00 0.00 0.08 0.00 ..TGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................................. 22 49 0.08 0.00 0.00 0.08 0.00 TGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................................... 22 49 0.08 0.00 0.00 0.08 0.00 ...........GTCTGTCTGTGTGTGTATGTG.......................................................................................................................................................................... 21 4 1.00 0.75 0.00 0.25 0.00 ..............TGTGTGTGTGTGTGTGTGTGTGTT.................................................................................................................................................................... 24 17 0.24 0.00 0.06 0.18 0.00 ..........TGTGTGTGTGTGTGTGTGTGTG.......................................................................................................................................................................... 22 49 0.08 0.00 0.00 0.08 0.00 ...........GTCTGTCTGTGTGTGTATG............................................................................................................................................................................ 19 6 0.67 0.67 0.00 0.00 0.00 ..................TGTGTGTGTGTGTGTGTGTGTG.................................................................................................................................................................. 22 49 0.08 0.00 0.00 0.08 0.00 ..............TGTGTGTGTGTGTGTGTGTGTG...................................................................................................................................................................... 22 49 0.08 0.00 0.00 0.08 0.00 ....TGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................................ 22 49 0.08 0.00 0.00 0.08 0.00 ....................TGTGTGTGTGTGTGTGTGTGTG................................................................................................................................................................ 22 49 0.08 0.00 0.00 0.08 0.00 ......TGTGTGTGTGTGTGTGTGTGTG.............................................................................................................................................................................. 22 49 0.08 0.00 0.00 0.08 0.00 .......GTCTGTCTGTGTGTGTATG................................................................................................................................................................................ 19 6 0.67 0.67 0.00 0.00 0.00 ...................GTGTGTGTGTGTGTGTGTGTGTGTGG............................................................................................................................................................. 26 9 0.33 0.22 0.00 0.11 0.00 ..........................TTTGTGTGTGTGTGTGTG.............................................................................................................................................................. 18 49 0.06 0.02 0.02 0.02 0.00 ...............GTGTGTGTGTGTGTGTGTGTGTGTGG................................................................................................................................................................. 26 9 0.33 0.22 0.00 0.11 0.00 .......GTCTGTCTGTGTGTGTATGT............................................................................................................................................................................... 20 4 0.75 0.75 0.00 0.00 0.00 ..............TTTGTGTGTGTGTGTGTG.......................................................................................................................................................................... 18 49 0.06 0.02 0.02 0.02 0.00 ............TTTGTGTGTGTGTGTGTG............................................................................................................................................................................ 18 49 0.06 0.02 0.02 0.02 0.00 ..................TTTGTGTGTGTGTGTGTG...................................................................................................................................................................... 18 49 0.06 0.02 0.02 0.02 0.00 ......................TTTGTGTGTGTGTGTGTG.................................................................................................................................................................. 18 49 0.06 0.02 0.02 0.02 0.00 ..............TGTGTGTGTGTGTGTGTGT......................................................................................................................................................................... 19 35 0.09 0.03 0.00 0.06 0.00 ............TCTGTGTGTGTATGTGTGTT.......................................................................................................................................................................... 20 6 0.50 0.50 0.00 0.00 0.00 ...........GTCTGTCTGTGTGTGTATGT........................................................................................................................................................................... 20 4 0.75 0.75 0.00 0.00 0.00 .................GTGTGTGTGTGTGTGTGTGTGTGTGG............................................................................................................................................................... 26 9 0.33 0.22 0.00 0.11 0.00 ........................TGTGTGTGTGTGTGTGTGT............................................................................................................................................................... 19 35 0.09 0.03 0.00 0.06 0.00 ......................TGTGTGTGTGTGTGTGTGT................................................................................................................................................................. 19 35 0.09 0.03 0.00 0.06 0.00 ....................TGTGTGTGTGTGTGTGTGT................................................................................................................................................................... 19 35 0.09 0.03 0.00 0.06 0.00 ................TTTGTGTGTGTGTGTGTG........................................................................................................................................................................ 18 49 0.06 0.02 0.02 0.02 0.00 ....................TTTGTGTGTGTGTGTGTG.................................................................................................................................................................... 18 49 0.06 0.02 0.02 0.02 0.00 ................TGTGTGTGTGTGTGTGTGT....................................................................................................................................................................... 19 35 0.09 0.03 0.00 0.06 0.00 ..................TGTGTGTGTGTGTGTGTGT..................................................................................................................................................................... 19 35 0.09 0.03 0.00 0.06 0.00 ........................TTTGTGTGTGTGTGTGTG................................................................................................................................................................ 18 49 0.06 0.02 0.02 0.02 0.00

droPer1 - 1 hit found

droWil1 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
249	scaffold_180955:1135974-1136099 -	44.85	TGGGGCAGT-----GGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTT------------------TC-GTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TATGGCGATATTTTGTAGGTTTTGGCA-ATGGTTGTGGCTTTCCGCTTCTATTCAGTCGCACGAAAAATTTTCTCGGTTTTTTCCCAT----------------------GTCTAAAAATAGATTT--------ACACC-CAAAGTA---GAAAAACATAA Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ...................TTTTGGCA-TTGGCTGTGGC.......................................................................................................................... 19 1 2.00 0.00 2.00 0.00 0.00 .....................GTGGCA-ATGGTGGTGGCT......................................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 ...................................................................ATTTTCTCGGTTTTTGCT............................................................................ 18 1 1.00 0.00 0.00 0.00 1.00 .........................CA-ATGGTCGTGGCATTCC..................................................................................................................... 18 1 1.00 0.00 1.00 0.00 0.00 .............................................................................................................................................AAAATA---GAAAAACAGAA 18 13 0.08 0.00 0.08 0.00 0.00 ....................TTTGGCA-TTGGCTGTGGC.......................................................................................................................... 18 2 0.50 0.00 0.50 0.00 0.00
185	scaffold_181150:3135129-3135208 +	28.18	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGT-TCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TTTATCAGTTTGCCTGCCCTTTTTATTTGAACCTTTTAAGAATCTACGTTTTGTATTATTTCATTGTTCAT---CTGAAACTC------------------------------------------------------- Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head ............................................TACGTTTTGTATTATTTCATTGTTCAT---C............................................................... 28 1 1.00 0.00 1.00 0.00 0.00
239	scaffold_180764:1411765-1411775 -	3.7	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TCAAACAAAGG------------------------------------------------------------------------------------------------------------------------------ Size Hit Count Total Norm V117 Male body V118 Embryo V119 Head M020 Head	None	None

droVir3 - 3 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
708	scaffold_13049:19660195-19660299 +	38.52	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA --------------------------------GTTCTGCGCTAGCTTGTTCGGTTTGGTAACATGAGCTTCATTAGTGTATGCAATAATGGCAAACATTTTTTGCCTGCCAGGCCTCGGCGAGGACGATGACGACGA Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head ...................................................................................................................TCGGCGGGGACGATGATGAC.. 20 1 5.00 2.00 2.00 1.00 0.00 0.00 ........................................................................................................................GATGACGACGACGACGA 18 25 0.16 0.00 0.00 0.04 0.12 0.00 ....................................................................................................................CGGCGGGGACGATGATGAC.. 19 1 3.00 2.00 0.00 1.00 0.00 0.00 ...................................................................................................................TCGGCGGGGACGATGATGACG. 21 1 3.00 0.00 3.00 0.00 0.00 0.00 ......................................................................................................................GCGGGGACGATGATGACG. 18 1 2.00 0.00 1.00 1.00 0.00 0.00 .....................................................................................................................GGCGGGGACGATGATGACG. 19 1 2.00 0.00 1.00 1.00 0.00 0.00 .......................................................................................................................CGATGACGAGGACGACGA 19 5 0.40 0.00 0.00 0.20 0.20 0.00 ....................................................................................................................CGGCGGGGACGATGATGACG. 20 1 2.00 2.00 0.00 0.00 0.00 0.00 ..........................................AGCTTGTTxGGTGTGGTAA............................................................................ 18 1 1.00 0.00 1.00 0.00 0.00 0.00 .....................................................................................................................GGCGGGGACGATGATGAC.. 18 1 1.00 0.00 1.00 0.00 0.00 0.00 ....................................................................................................................CGGCGAGGACGATGATTAC.. 19 1 1.00 1.00 0.00 0.00 0.00 0.00 ....................................................................................................................CGACGATGACGATGACGACGA 21 5 0.20 0.20 0.00 0.00 0.00 0.00 ........................................................................................................................GATGACGATGATGACGA 18 15 0.07 0.00 0.00 0.00 0.07 0.00 ...................................................................................................................TCGGCGGGGACGATGATG.... 18 1 1.00 0.00 0.00 1.00 0.00 0.00 .......................................................................................................................CGAGGACGAGGAGGACGA 18 4 0.25 0.00 0.00 0.00 0.00 0.25 ......................................................................................................................GCGGGGACGATGACGACG. 18 3 0.33 0.00 0.33 0.00 0.00 0.00 .....................................................................................................................GACGATGACGATGACGACGA 20 9 0.11 0.00 0.00 0.00 0.11 0.00 ..................................TCCGCCCTAGCTTGTTCG..................................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 0.00 ...........................................GCTTGTTxGGTTGGGTAAC........................................................................... 18 1 1.00 0.00 0.00 1.00 0.00 0.00 ........................................................................................................................GACGACGATGACGACGA 18 22 0.05 0.00 0.00 0.00 0.05 0.00 ........................................................................................................................GACGACGATGATGACGA 18 14 0.07 0.00 0.00 0.00 0.07 0.00 ....................................................................................................................CGGCGGGGACGATGATGA... 18 1 1.00 1.00 0.00 0.00 0.00 0.00
1536	scaffold_13049:13912126-13912180 -	20.35	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA CAG-TCAGCGACGATGTTTTCGC--AGCTGTTGTTTTTTTTTTTTTTGTGGTGTTTA-------------------------------------------------------------------------------- Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head .............................GTTGTTTGTTTTTTTTTTGT........................................................................................ 20 6 0.17 0.00 0.17 0.00 0.00 0.00 .............................GATGTTTTTTTTTTTTTCG......................................................................................... 19 6 0.17 0.00 0.00 0.17 0.00 0.00 ..........................GCTGTTGGTTTTTTTTTTC............................................................................................ 19 5 0.20 0.00 0.00 0.20 0.00 0.00
530	scaffold_12970:11389907-11389956 +	19.86	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA ---GGCAACGGATACGCCCAA-TTGTGCTGGGCATTTCCATTGGCATTTCTAG------------------------------------------------------------------------------------ Size Hit Count Total Norm V116 Male body V053 Unknown V047 Embryo M027 Male body M028 Head

droMoj3 - 8 hits found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
311	scaffold_6496:15371578-15371721 +	46.28	TGGGGCAGTGGAGCTGCCTGCATAACGC---TGTGGC-------------------TTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGG---GAAATGAGGAAAATTA TGCAACATTGATGAAATATGCATAATGAAAATGTGCCCTCAGAGTTATCCACGATTTTTCTACTTT--TTTTTTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTATA------ATGGTTTTGTTGAAATGTATGTAACAGGG---AGAAG------- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTT..................................... 24 7 29.14 15.00 0.00 0.14 14.00 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTT...................................... 23 7 6.57 4.86 0.00 0.29 1.43 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTTT.................................... 25 7 5.43 4.00 0.00 0.14 1.29 ...............................................................................................TGGGAAATCAGGGTATA------ATGGT....................................... 22 7 4.14 3.14 0.00 0.00 1.00 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTTTG................................... 26 7 3.43 3.14 0.14 0.00 0.14 ...............................................................................................TGGGAAATCAGGGTATA------ATGG........................................ 21 7 3.14 2.43 0.00 0.00 0.71 .......................................................................................ATTTTCAATGGGAAATCAGGGT..................................................... 22 5 3.00 2.80 0.20 0.00 0.00 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTC...................................... 23 7 2.00 1.86 0.00 0.00 0.14 ..............................................................................................ATGGGAAATCAGGGTATA------ATGGTTT..................................... 25 7 1.86 1.43 0.00 0.00 0.43 .......................................................................................................................................TATGTAACAGGG---AGAAG------- 21 6 2.00 2.00 0.00 0.00 0.00 ...............................................................................................TGGGAAATCAGAGTATA------ATGGTTT..................................... 24 7 1.71 1.14 0.00 0.00 0.57 ...............................................................................................TGGGAAATCAGTGTATA------ATGGTTT..................................... 24 7 1.57 0.86 0.00 0.00 0.71 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTC..................................... 24 7 1.00 1.00 0.00 0.00 0.00 .............................................................................................AATGGGAAATCAGGGTATA------AT.......................................... 21 8 0.88 0.88 0.00 0.00 0.00 .....................................................................................CCATTTTCAATGGGAAATCAGGGT..................................................... 24 4 1.75 1.75 0.00 0.00 0.00 ...............................................................................................TGGGAAATCAGGGTATT------ATGGTTT..................................... 24 7 1.00 0.71 0.00 0.00 0.29 ..........................................................................................TTCAATGGGAAATCAGGGTATA------ATGG........................................ 26 4 1.50 1.25 0.00 0.00 0.25 .....................................................................................................................................TGTATGTAACAGGG---AGAAG------- 21 6 0.83 0.67 0.00 0.17 0.00 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTTTGTC................................. 28 7 0.71 0.71 0.00 0.00 0.00 ..............................................................................................ATGGGAAATCAGGGTATA------ATG......................................... 21 7 0.71 0.43 0.29 0.00 0.00 ...............................................................................................................................TTGAAATGTATGTAACAGGG---A........... 21 4 1.25 1.25 0.00 0.00 0.00 ...............................................................................................TGGGAAATCAGGGTGTA------ATGGTTT..................................... 24 7 0.57 0.14 0.00 0.00 0.43 ...............................................................................................TGGGAAATCAGAGTATA------ATGGTTTT.................................... 25 7 0.57 0.57 0.00 0.00 0.00 ..............................................................................................ATGGGAAATCAGGGTATA------ATGG........................................ 22 7 0.57 0.57 0.00 0.00 0.00 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTTTGC.................................. 27 7 0.57 0.57 0.00 0.00 0.00 .........................................................................................TTTCAATGGGAAATCAGGGTA.................................................... 21 5 0.80 0.60 0.20 0.00 0.00 ...............................................................................................TGGGAAATCAGAGTATT------ATGGTTT..................................... 24 6 0.50 0.33 0.00 0.00 0.17 ...............................................................................................CGGGAAATCAGGGTATA------ATGGTTT..................................... 24 7 0.43 0.14 0.00 0.00 0.29 ...............................................................................................TGGGAAATCAGGGTATA------ATG......................................... 20 7 0.43 0.29 0.00 0.00 0.14 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTTC.................................... 25 7 0.43 0.43 0.00 0.00 0.00 ..........................................................................................TTCAATGGGAAATCAGCGTATA------ATGG........................................ 26 4 0.75 0.75 0.00 0.00 0.00 .............................................................................................AATGGGAAATCAGGGTATA------ATGGTTT..................................... 26 7 0.43 0.29 0.00 0.14 0.00 ........................................................................................TTTTCAATGGGAAATCAGGGT..................................................... 21 5 0.60 0.20 0.20 0.00 0.20 ....................................................................................................................................ATGTATGTAACAGGG---AGAAG------- 21 6 0.50 0.50 0.00 0.00 0.00 .......................................................................................ATTTTCAATGGGAAATCAGGG...................................................... 21 5 0.60 0.60 0.00 0.00 0.00 ......................................................................................CATTTTCAATGGGAAATCAGGGT..................................................... 23 4 0.75 0.75 0.00 0.00 0.00 .............................................................................................AATGGGAAATCAGGGTATA------ATGGTTC..................................... 26 7 0.43 0.43 0.00 0.00 0.00 ......................................................................................................................................GTATGTAACAGGG---AGAAG------- 21 7 0.43 0.29 0.00 0.14 0.00 ...............................................................................................TGGGAAATCAGGGTATA------ATGGTTTTA................................... 26 7 0.43 0.14 0.00 0.14 0.14 .............................................................................................AATGGGAAATCAGGGTATA------ATG......................................... 22 7 0.43 0.14 0.00 0.14 0.14 .......................................................................................................CAGGGTATA------ATGGTTTTGTTG................................ 21 5 0.60 0.40 0.00 0.20 0.00 .............................................................................................................ATA------ATGGTTTTGTTGAAATGT.......................... 21 5 0.60 0.60 0.00 0.00 0.00 ..............................................................................................ATGGGAAATCAGGGTATA------ATGGT....................................... 23 7 0.43 0.43 0.00 0.00 0.00 ...............................................................................................TGGGAAATCAGGGTATA------ATGGGTTTG................................... 26 7 0.43 0.00 0.00 0.00 0.43 ..........................................................................................................................................GTAACAGGG---AGAAG------- 19 6 0.50 0.33 0.17 0.00 0.00
808	scaffold_3197:5105-5226 -	40.4	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGC-----TTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTT----CAAGGGAAATGAGGAAAATTA GCAAAAATTTCCACTTCA------AAAATGTCCA--CTTACATATATATTTCTTTTTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTATA------ATGGTTTTGTTGAAATGTATGTAACAGGG----AG-------AAG Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ..............................................................................TGGGAAATCAGGGTATA------ATGGTTT...................................... 24 7 29.14 15.00 0.00 0.14 14.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGTT....................................... 23 7 6.57 4.86 0.00 0.29 1.43 ..............................................................................TGGGAAATCAGGGTATA------ATGGTTTT..................................... 25 7 5.43 4.00 0.00 0.14 1.29 ..............................................................................TGGGAAATCAGGGTATA------ATGGT........................................ 22 7 4.14 3.14 0.00 0.00 1.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGTTTTG.................................... 26 7 3.43 3.14 0.14 0.00 0.14 ..............................................................................TGGGAAATCAGGGTATA------ATGG......................................... 21 7 3.14 2.43 0.00 0.00 0.71 ......................................................................ATTTTCAATGGGAAATCAGGGT...................................................... 22 5 3.00 2.80 0.20 0.00 0.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGTC....................................... 23 7 2.00 1.86 0.00 0.00 0.14 .............................................................................ATGGGAAATCAGGGTATA------ATGGTTT...................................... 25 7 1.86 1.43 0.00 0.00 0.43 ..............................................................................TGGGAAATCAGAGTATA------ATGGTTT...................................... 24 7 1.71 1.14 0.00 0.00 0.57 ..............................................................................TGGGAAATCAGTGTATA------ATGGTTT...................................... 24 7 1.57 0.86 0.00 0.00 0.71 ....................................................................CCATTTTCAATGGGAAATCAGGGT...................................................... 24 4 1.75 1.75 0.00 0.00 0.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGTTC...................................... 24 7 1.00 1.00 0.00 0.00 0.00 ............................................................................AATGGGAAATCAGGGTATA------AT........................................... 21 8 0.88 0.88 0.00 0.00 0.00 ..............................................................................TGGGAAATCAGGGTATT------ATGGTTT...................................... 24 7 1.00 0.71 0.00 0.00 0.29 .........................................................................TTCAATGGGAAATCAGGGTATA------ATGG......................................... 26 4 1.50 1.25 0.00 0.00 0.25 ....................................................................................................................TGTATGTAACAGGG----AG-------AAG 21 6 0.83 0.67 0.00 0.17 0.00 ..............................................................................................................TTGAAATGTATGTAACAGGG----A........... 21 4 1.25 1.25 0.00 0.00 0.00 .............................................................................ATGGGAAATCAGGGTATA------ATG.......................................... 21 7 0.71 0.43 0.29 0.00 0.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGTTTTGTC.................................. 28 7 0.71 0.71 0.00 0.00 0.00 ..............................................................................TGGGAAATCAGGGTGTA------ATGGTTT...................................... 24 7 0.57 0.14 0.00 0.00 0.43 ........................................................................TTTCAATGGGAAATCAGGGTA..................................................... 21 5 0.80 0.60 0.20 0.00 0.00 ..............................................................................TGGGAAATCAGAGTATA------ATGGTTTT..................................... 25 7 0.57 0.57 0.00 0.00 0.00 .............................................................................ATGGGAAATCAGGGTATA------ATGG......................................... 22 7 0.57 0.57 0.00 0.00 0.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGTTTTGC................................... 27 7 0.57 0.57 0.00 0.00 0.00 .....................................................................CATTTTCAATGGGAAATCAGGGT...................................................... 23 4 0.75 0.75 0.00 0.00 0.00 ...................................................................................................................ATGTATGTAACAGGG----AG-------AAG 21 6 0.50 0.50 0.00 0.00 0.00 ............................................................................................ATA------ATGGTTTTGTTGAAATGT........................... 21 5 0.60 0.60 0.00 0.00 0.00 ......................................................................................CAGGGTATA------ATGGTTTTGTTG................................. 21 5 0.60 0.40 0.00 0.20 0.00 ............................................................................AATGGGAAATCAGGGTATA------ATG.......................................... 22 7 0.43 0.14 0.00 0.14 0.14 ..............................................................................TGGGAAATCAGAGTATT------ATGGTTT...................................... 24 6 0.50 0.33 0.00 0.00 0.17 .....................................................................................................................GTATGTAACAGGG----AG-------AAG 21 7 0.43 0.29 0.00 0.14 0.00 ..............................................................................TGGGAAATCAGGGTATA------ATG.......................................... 20 7 0.43 0.29 0.00 0.00 0.14 ............................................................................AATGGGAAATCAGGGTATA------ATGGTTT...................................... 26 7 0.43 0.29 0.00 0.14 0.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGTTTTA.................................... 26 7 0.43 0.14 0.00 0.14 0.14 ......................................................................ATTTTCAATGGGAAATCAGGG....................................................... 21 5 0.60 0.60 0.00 0.00 0.00 ..............................................................................TGGGAAATCAGGGTATA------ATGGGTTTG.................................... 26 7 0.43 0.00 0.00 0.00 0.43 ..............................................................................TGGGAAATCAGGGTATA------ATGGTTTC..................................... 25 7 0.43 0.43 0.00 0.00 0.00 ............................................................................AATGGGAAATCAGGGTATA------ATGGTTC...................................... 26 7 0.43 0.43 0.00 0.00 0.00 .............................................................................ATGGGAAATCAGGGTATA------ATGGT........................................ 23 7 0.43 0.43 0.00 0.00 0.00 .......................................................................TTTTCAATGGGAAATCAGGGT...................................................... 21 5 0.60 0.20 0.20 0.00 0.20 ..............................................................................CGGGAAATCAGGGTATA------ATGGTTT...................................... 24 7 0.43 0.14 0.00 0.00 0.29 .........................................................................TTCAATGGGAAATCAGCGTATA------ATGG......................................... 26 4 0.75 0.75 0.00 0.00 0.00
487	scaffold_6500:20220752-20220849 +	38.09	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TATA------------------------------TTTTTGCTTCAATTTGTA---------CAGAAATTTCCATAGATGAAGTGTCAAACAAACAGAAAAATTAATTATCGTTCATCAATGCAGAATCGTAAACTAA Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo
344	scaffold_6498:2098657-2098696 +	21.48	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA -----------------------AATGCTCTTGCCTTTCGCTGCTTTTATACGCGCACTGCCT-------------------------------------------------------------------------- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo .........................TGTTCTTGCCTTTTGCTGCTTTT......................................................................................... 23 1 1.00 0.00 0.00 0.00 1.00
845	scaffold_5828:129-171 -	19.82	TGGGGCAGTGGAGCTGCCTGCATAACGCT--GTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TGGAGCAATA--GCTATTTCAATAATTTTTCGCGTCTTTCAGCTT---------------------------------------------------------------------------------------------- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ........TA--GCTATTTCAATAATTTTTCGCGTC....................................................................................................... 26 1 5.00 3.00 0.00 0.00 2.00 ........TA--GCTATTTCAATAATTTTTCGCG......................................................................................................... 24 2 2.00 0.00 0.00 0.00 2.00 .....................ATAATTTTTCGCGTCTTTCAG................................................................................................. 21 1 3.00 3.00 0.00 0.00 0.00 ........TA--GCTATTTCAATAATTTTTCGCGTCTT..................................................................................................... 28 1 3.00 3.00 0.00 0.00 0.00 ....................AATAATTTTTCGCGTCTTTCA.................................................................................................. 21 1 3.00 2.00 0.00 0.00 1.00 ........TA--GCTATTTCAATCATTTTTCGCGTCT...................................................................................................... 27 1 2.00 2.00 0.00 0.00 0.00 ......................TAATTTTTCGCGTCTTTCAGC................................................................................................ 21 1 2.00 1.00 0.00 0.00 1.00 ........TA--GCTATTTCAATCATTTTTCGCG......................................................................................................... 24 3 0.33 0.00 0.00 0.00 0.33 ........TA--GCTATTTCAATCATTTTTTGCG......................................................................................................... 24 2 0.50 0.00 0.00 0.00 0.50 ........TT--GATATTTCAATAATTTTTCGCGTCT...................................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 ................CTTCAATAATTTTTCGCGTCTTTCAGC................................................................................................ 27 1 1.00 1.00 0.00 0.00 0.00 ........TA--GATATTTCAATAATTTTTCGTGTCT...................................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 ........TA--GATATTTCAATAATTTTGCGCGT........................................................................................................ 25 1 1.00 1.00 0.00 0.00 0.00 .....................ATAATTTTTCGCGTCTTTCAGC................................................................................................ 22 1 1.00 1.00 0.00 0.00 0.00 ........TA--GCTATTTCAATCATTTTTCCCG......................................................................................................... 24 2 0.50 0.00 0.00 0.00 0.50 ......................TAATTTTTCGCGTCTTTCAG................................................................................................. 20 1 1.00 0.00 0.00 0.00 1.00 ........TA--GATATTTCAATAATTTTTCGCGTCTT..................................................................................................... 28 2 0.50 0.50 0.00 0.00 0.00 TGGAGCAATA--GATATTTCAAT.................................................................................................................... 21 2 0.50 0.50 0.00 0.00 0.00 ................TTTCAATAATTTTTCGCGTTTTTC................................................................................................... 24 1 1.00 1.00 0.00 0.00 0.00 ........TA--GCTATTTCAATAATTTTTCGCGT........................................................................................................ 25 1 1.00 1.00 0.00 0.00 0.00 ...............ATTTCAATAATTTTTCGCGT........................................................................................................ 20 1 1.00 1.00 0.00 0.00 0.00 ..............TATTTCAATCATATTTCGCGT........................................................................................................ 21 1 1.00 1.00 0.00 0.00 0.00 ........TA--GCTATTTCAATCATTTTTCGCGT........................................................................................................ 25 2 0.50 0.00 0.00 0.00 0.50 ........TA--GCTATTTCAATAATTTTTCGCGTCT...................................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 ........TT--GCTATTTCAATCATTTTTCG........................................................................................................... 22 3 0.33 0.00 0.00 0.00 0.33 .............CTATTTCAATAATTTACCGCGT........................................................................................................ 22 1 1.00 1.00 0.00 0.00 0.00 ........TA--GATATTTCAATAATTTTTCGCGTCT...................................................................................................... 27 2 0.50 0.00 0.00 0.00 0.50 .........A--GCTGTTTCAATCATTTTTCGCGTCT...................................................................................................... 26 1 1.00 1.00 0.00 0.00 0.00 ........TA--GATATTTCAATAATTTTTCGCGT........................................................................................................ 25 2 0.50 0.00 0.00 0.00 0.50 ........TA--GCTGTTTCAATCATTTTTCGCGTCT...................................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 .................TTCAATCATTTTTCGCGTCTTT.................................................................................................... 22 1 1.00 1.00 0.00 0.00 0.00 ........TA--GCTATTTCAATCATTTTTCGCGTCTT..................................................................................................... 28 1 1.00 1.00 0.00 0.00 0.00 ........TA--GCTATTTCAATCATTTTTCACGTCT...................................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 .......................AATTTTTCGCGTCTTACAGCTT---------------------------------------------------------------------------------------------- 22 1 1.00 1.00 0.00 0.00 0.00 .................TTCAATAATTTTTCGCGTCTT..................................................................................................... 21 1 1.00 0.00 0.00 0.00 1.00 .................TTCAATAATTTTTCGCGTCT...................................................................................................... 20 1 1.00 1.00 0.00 0.00 0.00 ........TG--GCTATTTCAATAATTTTTCGCGTCTT..................................................................................................... 28 1 1.00 1.00 0.00 0.00 0.00 ........TA--GCTATTTCAGTCATTTTTCGCGT........................................................................................................ 25 1 1.00 0.00 0.00 0.00 1.00 .........A--GCTATTTCAATAATTTTTCGCGT........................................................................................................ 24 1 1.00 1.00 0.00 0.00 0.00 ............GCTATTTCAATAATTTTTCGCGTCTTA.................................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 ......AATA--GCTATTTCAATAATTT............................................................................................................... 20 2 0.50 0.00 0.00 0.00 0.50 ............GCTATTTCAATAATTTTTCGCGTCTT..................................................................................................... 26 1 1.00 1.00 0.00 0.00 0.00 .....................ATAATTTTTCGCGTCTTACAGC................................................................................................ 22 1 1.00 1.00 0.00 0.00 0.00 ........TA--GCTATTTCAGTCATTTTTCGC.......................................................................................................... 23 3 0.33 0.00 0.00 0.00 0.33 .........A--GCTATTTCAATAATTTTTCGCGTCA...................................................................................................... 26 1 1.00 1.00 0.00 0.00 0.00 .................TTCAATCATTTTTCGCGTCTTTCTGCT............................................................................................... 27 1 1.00 1.00 0.00 0.00 0.00 ........TA--GATATTTCAATAATTTTTCGCGTC....................................................................................................... 26 2 0.50 0.50 0.00 0.00 0.00 ..............TATTTCAATAATTTACCGCGTCT...................................................................................................... 23 1 1.00 0.00 0.00 0.00 1.00
1203	scaffold_6540:23807110-23807152 -	18.1	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TCGTGTGGTTG-ACTGTCTGTCTGTTCCCGCAGCAGTCCACTTC--------------------------------------------------------------------------------------------- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo
64	scaffold_3519:2520-2559 +	17.04	TGG-GGCAGTGGAGCTGCCTGCATAACG---CTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA TCGTGCCACTGCAACCCAGTGCTTAGCGAATCCTTGGCTT----------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo ..................GTGCTTAGTGAATCCTTGG........................................................................................................ 19 1 1.00 1.00 0.00 0.00 0.00 ................CAGTGCTTAGCGAATCCTTGG........................................................................................................ 21 1 1.00 1.00 0.00 0.00 0.00
338	scaffold_6498:1316767-1316778 +	5.19	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA AAGGGTATTAGA----------------------------------------------------------------------------------------------------------------------------- Size Hit Count Total Norm V110 Male body V056 Unknown V049 Head V041 Embryo	None	None

droGri2 - 1 hit found

Lastz ID	Coordinate	Normalized Identity %	Sequence	RNAfold	UNAfold
421	scaffold_15203:7704730-7704834 +	30.09	TGGGGCAGTGGAGCTGCCTGCATAACGCTGTGGCTTTCCGCTTCTATTTTTCGTTCACTGCCTTGTGCTTCGTTGGAAAATCGGTGAGCTAAAAATAGAATTCGGTTGCCACGCTTCAAGGGAAATGAGGAAAATTA CAGAATAATAGAATGTACTCACTTCAGCTATGGCATACAGATTTGCTTTAT-TTGCTTTTCGTTGTACTT-------------------------------TCTGTTTTCTCAATGTACATGAAAAAGACTGAATTT Size Hit Count Total Norm V109 Male body

Generated: 04/20/2012 at 05:33:50 EDT